Cp4.1LG15g06810 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG15g06810
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRibonuclease E/G family protein
LocationCp4.1LG15 : 7363756 .. 7372625 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTACAACCCTTGTTACTCGTGCCAAAGAAGGCGCCAAGTGAGCGACAAAAGCGAAAATCCTATCGGCTCAGGTTCGCTCCTCTTTCACGACTGTCCTCACGTGTATTTCCCTTCGTTATCCAAAGTAGTAGAGCTCAAGGCTTTTCGCTTTTTTCAAATTCGCTCTCTATGACGGAACTGCCAGTTCCATTTCACCAATTTTGTCTAGCCCTTCATGGGTTCTCCATTTCTCTACCTCTGTGCCTCTGAACTCTATCATCAACCTCGGTTCATGGCTGTTCCTGAAGCTTGTTCGTGGCCTAACCATCTTGTATTGCGCCGCCGCTTGCGCCTCTCTGGCCCTTGGCAACTATGCGCCGACAAGTTTCTATCGCTATCTCCGTAAGTTTCCAACATGAAAAACATCTCGCATTCTTCGTTGTCTGTACGTGTTTTTTTGAGGGTTTTTCTTGCTTTTTCAAACACGACATCGGTCAGCATTTTGGCTTTTGGTCTGTATAAGTTCGAGTTTTCTCGTGTGGTGTTAATGGGTTATCTGTATTGTGTTCAATAGCTGTTTTAATCTTTATTGTACGTCATTCCAGAAGAGAGGTCTTAATTGGTTCACTGTTCTTCAAGGGTGTTTCATGAAGCAAGCTGGTTTTCATGGATAGTTTCTAGTTTAAGGCCTGCGATAATGAATTCCTAGCCATTATACTTTACATGTATTCAGATCATTCTCTTGCATGATTGTAAGAATTGTAGACTGTTTCTTGCCCGTCTTTGAGTGAGTTTGAAATGGCTTTTAAGAGTACATTTCAAGTCTAAACAATAAATTATGAAGCGTGTGGAAAGTACTTTTGAGCTATTAAAAAACTTAGGTGATTCCTCTGTAAAACCTACAATGTGAAAGCAGGTATATTTGTCGGCACATGCCTCTTGAAAAGATGAGATTTCGTCTCTGCACAGGGCAGAATCATTATGTTGGAGGGTCGCCTATAATGTCGACTCAAAAAGGTAATCAGTTGTTCATTTTTAATTTGATGATCAATTTTTGCTTGGATATGATCAATTTTTTCCTTTGATCACGTTGTTTCTTGACTGACACTTAATATCTTAATGACCGAAAAAGGTTTCATATCAGATTTAGTTTAGTTCTATCTTGTTCTTGTCTTGTTTGTTACTCTGATTGCAATGTAACATACGTTACAGTTGAGGACTATTTCTTAAAATGATGTCTTGGTGCTTATCGGTTATTGTAATGGCCCAAACACACCGCTAGCAGATATTGTTCTCTTTAGGCTTTCCCTTTCGGGCTTCCTCTCAAGGTTTTTAAAATGGGTATACTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTTGTTCTCCTCCCTAACCGATGTGAGATCTCACAATCTACCCCTTCGGAGCCCGGCGTCCTCACTGGCATTCGTTCCCTTCTCCAATCAATGTGGGACCCCCAATCCACCCCCCTTCGAGTCCAGTATCCTTGTTGACACACCGCCTCGTGTCCTCCCCTTCGAGGCTCAGCCTCCTCGCTGGCACATTGCCCAGTGTCTTGCTTTTATACCATTTGTAATAGCCCAAGTCCACTGCTAAAGCCCGAAAGGAAAAGCCTAAAGAGGGCAATATCTGCTAGCGGTGGGCTTAGGCTTGGGCTGTTAGTCTTTGTCGTCTTTGTCTTTTTTGAAGCTTGAAAGTTTTCCTCATATGTAGAGCTCCAACAGCAGAAAAATGAACATATAGTTGAATATGCATCTAAAGTTTCAAATTAACTTGCAAGTCTTTTTGTCAATTGGGATATAATTAGGTTGCTGTTAACAGTCATTTAGCTAATATTGCAAATTTGAAATTAACCACTTCAGGACCGTGGACCGTGCCCCATGCAATGAGGCGGACGTACTCTTCCTATATCTTCTCATAAATATGATCTTCTTGCTCTCCTTTCATGTCACTACTTATTGCTTAGAATTGCTGATGAACCCTCAATTGCTTCTGAAGGAGTATGCAAAGTAGTTTGGACTATTGAAGCTGATTTGGAAGCCGATCAACTTCTTTACTTAACTGGGGACCCTATCGCATTAGGCTCGTGGGAACCAAATATGGCGATACAAATGTCTCATGTGGATCATTCTAACTTATGGAAGGCTGAAGTCAAGGTGATGACCGAAGCCGCGGTGTGTTGTATGTTACACTATTATTTTGTTTCATTTCAAAGTCCCCTCTTTACGTTCTTGGCAGATAGCTCGTGGCATAAATTTCAAGTACAATTATTTTATCAAGGAAGAATCATTGCCTTCATCTGTCATCTGGAGAACTGGACCTGAGTTCTCTCTATGCCTACCTCAAACTGCCGAACATAATAAACAAATCGTGGTGAGGGACTCATGGATGAGGTTTGCTATCACACGCCCTTCAGTTTTCACATGGGATTCATGGATAGAGGAACTGCCATCGAAATCTTTTCCACCAGAAGGTAATATCTCATTTTGATTTCTATCGTCAAGCAAATTCCTCTCTTAAAATGCTTCTGAACACTTAAATGCTTCCAGTGATTTGACAGATGAATGTGTATTTGAAGAAGAATGTATTGAGAGTGATTCTATTGAGCCCAACATAAATTTAAATGGTACCGTGATATATGATAAATTATACTCTGATCATGAGGAACTGATGGATTCTACAAGTCAGAGCTCGGAATCTCATAGACATCAACCTATTGAGGAACCGTGGTTAATTCAGCTACCCCTCTTTTTTGATGCATCTAAGAATGTGTTGGAATTGGGACCGGATCTGCTGAAAAATGATGTTATTGTAAAAGAAGAGACGACACTACTAGAAACTCGAGATCACCTATTGGAAGATGCAGCGAATCTGCTGCCTGCAGCTGGGGTTGATACAACGTTGGACCCTATTTCTACCGTCATACTGATTAATTCATCAATATGCACCATGCAGCGGATTGCTGTGTTGGAGGAAGGAAAATTGGTAGAGCTGCTACTGGAACCGGTTAAAAGCAATGTCCAGTGTGATAGTGTGTATTTAGGGGTTGTCTCAAAGCTTGTTCCTCACATGGGTGGTGCATTTGTAAATATTGGAAACACTAGACCTTCTCTAATGGACATTAAGCAAAACAGAGAACCTTTCATCTTCCCTCCTTTTCGTCAAAGGATAAATAAACGAGTGGTCAATGGCTCCATACAAGGACAACTAACATCACAAGATGAAAGTATATTGATTAATACAAAAACCGATGGTGTTGATGACCACGAGGACAATGAAGTTGAGGATGGCTTTGATGTTTCAGAGGTTCTTAGAGAAAATGTGAATGGGAGCGTTGTAGATGATGACGGTGATCTAGATGCCGACTTTGAAGACTGCGTAGATGATAAGGTACATCAAGACGGCAATGCTAGCAACAGTTATTCAGCTACTGCAAATTATTCCCACGGTTCTCAATCGTCTCTTCTCCAAGATGAAAAGGATTCTAAGCAGACAGTAACCGCTGAAAATAAATGGTTCCAAGTTCGGAAAGGCACCAAAATAATAGTGCAGGTTGTCAAAGAGGGGCTAGGGACTAAAGGTCCGACACTGACTGCTTACCCACAGCTAAGAAGCCGATTTTGGGTATGTTCCTCAAGATTTGTGCTTCAAGCATGAACTACTATTTATTTTAGTATATACTTTTTTCTTAACATCATCATATCAAACATTTTTCTAGGTGTGCTCTGAACCAAGTTCCTTGGCTTGCAGATATTGTTAACTCGTTGTGGTAGAATTGGCATCTCCAAGAAAATTTCTGGTGTCGAGCGTACGCGCTTAAGAGTTATAGCTAAAACCTTGCAGCCTCAAGGTTTTGGTTTGACTGTAAGAACAGTTGCTGCTGGTCATTCTTTAGAAGAATTACGAAAAGATTTGGAGGGTCTGATTTCAACATGGAAAACTATAACAGAACATGCAAAATTAGCTGCTCTAGCTGCAGATGAAGGCGTTGAGGGAGCAGTTCCTGTAATTCTCCATAGGGCTATGGGACAAACACTTTCAGTTGTTCAAGATTATTTTAATGAGAAGGTGGTTCTATGATTTATTATAATTCATTCTTGTCTATGTTGTGCCATTACTTAAACTGCAGGATTATAGCTGAACAACCAACCGACATTCCTGTCCTGTTTTTTTTTTTTTTTCAATTAATTTTCAGGTTAAAAGGATGGTAGTCGACTCTCCAAGGACGTATCACGAGGTACATTTTGATTTCAGCACTAGGTGATGTTGTATTTAAAAAATGGAGTTCGTTGCGTGAACGTGCACTAAGAGAGTACTGCAGAACTTGTCAGTAGTCTGCTTCTTTCAAACTAGAAATATTTCTTCCCTTTCTCAACGTCTCCAATTTTTTTTTTTTTTTTTCAAATAATTGATCTTAGCCTTCTGAATATAGTATTAAATGAGATAAGATAAATCCATGTCTAATTATCCCATGACGATGAACACGCGTAATAAAGTGATTGTACTTCATGATCAGCTATTGTTAATTATAAATTATGCAGATGGATTGCATCTGAATGTTTATTTATCAACATGTGTAATTTTTTTGTGCTGTCATCGTGTTCCTAAATGTGCAAACCGTTGTACATTGTTTTTCCAGGTCACTAATTACCTTCAGGAAATTGCTCCGGATCTATGTGATCGAGTCGAGTTATTTAAGGAAAGAATACCTCTTTTTGATAAATTCAATATTGAAGAGGAAATCAATAGTATGCTCAGTAAAAGGTGAGTTTTGTTAGCCTTGCTTATGTAACCAGTTAATATATGCAATCGATCACTACTCATGCAGCCTGTGTTAATCTCTCTTGCTTATCCTAATCTCCATATGTTTATATTTAATAGAAAAGAAACAGAATCTTTAATGCAAGGTTAAAAAATTCAAGATGAGCCTTACAGTTCCATATGATCAAATAGATACCTTCTATGGTCTGGCTTCAAGCCATCAAATTATGAACTTAATGACTTAAAACTCTCGTATCTTTGGAACCTGGTTTGCTTGTGTTATGGGGGGCGAAGTATCCTTAGAGATGGGCTCCCACGACCTTGATTATCCAAATAAAAAGAAGATAATGAACGAAGTATCAGGAGAAAGAGAAGACCTCCATTTTAAATAATAACCTGTCTATTTTAATCTCCATTCATCTGCCCATGTTGATTAATGGTCCTTGAAACTGGAAGATGATATATCTTCCCTGTAGGACACCAACTGTTGAGAATGTGAGTCGTAGTGTAACAGTCCAAGTCCTCCGCTAGCAGATATTATCCTCTTTGGGCTTTTCCTTTCAGGCTTACCCTTAAGGTTTTTAAAACGCGTCAGTGAGGACGCTGGATCCCGAAGGTGGGTGGATTGTGAGATCTCATATCGATTGGAGAGAGAGGAACGAGTGCCAGCGAGAACGTTGGGTAGATTGGGAGATCCCACATCGATTGAACGAGTGCCAGTGAGGATGCTGGACCCCGAATGGGGTGGATTGTGAAATCCCACGTTAGTTGGAGAGGAGAATGAAATATTTTTTTATAAGGGTGTGGAAACCTCCCTTAGCAAACACGTTTTAAAATCTTTGAGGGTAACCTCGAAAGAGAAAGCCCAAAGAGGACAATATCTGTTAGTGGTGGGCTTTGACTGTTACACGTAGTCTGATCATTTATTGATTCTCAATAGCATCATTACCCTGTATATAAAATGAATTCAACCTATTACCATGTATATAAAATGAATTCAACCCAATGCAATATCTTTGCTAGTGTTCATTTTATATTACCCAATTCTACTTGTTCACAGGGTTCCACTTGCTAATGGAGGTTCTCTAATAATTGAACAAACTGAGGCTCTAGTTTCCATTGATGTGAATGGAGGGCATGGGGTGTTCGGTCAAGAGACGTCGCAGGAGAAAGCTATTCTAGAGGTCAACCTTGCTGCTGCAAGACAGGTACGTCGGATCGTGATATTTTACATCATGTCTGTATTCCACATGGCTGTAGTTTTCGGCCGAGTTCCACATGCCCACCATATAAAGTGCACTCTATTGGAATATCTTCCTAAATTTTGCATTTTGCTAAGATATTTAAGTGTAATGTATGATAGCCTCTCTGGGTTTTTTGGTTGATATATATTTTGTTTGTAGTTATTATTAAATATCTGATTGGCAACAAATACTTTCAGATAGCAAGGGAATTACGATTGAGAGATATTGGTGGAATAATTGTTGTAGATTTCATTGACATGGCAGACGAATGTAAGTTCATTTTCCCTGTGTAACTTTGCATATTAAAGTGATCGGATATGTACTTCAACTTGCGGAACATAGAATTATTTGCATATAAAAGCAAATCTAGAATCTGTAGGTTGATTATATAAAGGCATGAAATCTGCTATGAATTATGAAATGAACTGAAACACTTGTCTACGATCTAGCCTGATACAATCAACTGGTCCTATATGTGAGATCTCACATAAGTTGGGGAGGAGAACGAAACATTCTTTATAAGAGTGTGGAAATCTCTTCCTAGCAGACGCGTTTTAAAAACCGTGAGGGAAATCCCAAAGAGTATCTACTAGCGGTGGGCTTGAGCTGTTAAAAATGGTATCAGAGCCAAACACTAGGCGATGTGCTAGCGAGGAGGCTGAGCTCCGAAGGGGGTGGACACGAGGCGGTGTGCCAGCAAGGATGTTGGGCCTCGAAGGGGGGTGGATTAGGGGTCCCATATCGATTTGAGAAGGGAATGAGTGTCAGCAAGGACGTTGGGCTCCAAAGGGAGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACCACTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGAGAGAAAACAAAAAAAAAAATAATATCTACTAGCGGTGGGCTTGAGCTGTTAAAGCTCTTTCACTGGAACTATGTGCTCAAAAAGTGAGAGAAGCTTGTTTAATCAAGGAAATTGGGTAGTGTTACTGAAAATATCTTCATTTTTGTTACTGTCATTGGAGGCATGGAGAATAGTCAAGCTTATGTCTATCTTTCTAATTAATGACATGGGATTCTTTTGTTTCAGCAAATAAGAGGTTAGTCTATGAAGAAATAAAGAAGGCGGTTGAGAGAGACAGGTCGATGGTGAAGGTTTCTGAGTTATCAAGGCATGGACTCATGGAAATTACAAGGAAGAGGGTATCTATCCTAAATTCTCCTTTATTCCCCATTATCTTTCCCTGATAATAGTGTAAGTAATCACTGAAGAACCAAGTTCTTTATTCAGACCTTAAAGTTGTAGTGTTTGGTGGACAGGTTCGGCCAAGTGTAACGTTTATGATCAGTGAACCGTGTGCTTGCTGTCATGCAACTGGAAGAGTCGAAGCTTTGGAAACCTCGTTTTCGAAAATCGAGCAGGAAATCTGTCGACAGCTTGTAAGTAATATATTTTACATCGAGTGATCTTCATACAATATTAACAGGCGATCGCCTCCGATTTCAATCTCCCATCTGCCAAATCTCTGGAAAGTCGACTTCGTTTGCGCCATTTTGCATCACTGTCTCTTTCCATTGTGGGCAGGCAACAATGAAGCAGAAACCAGATCCCGAAAATCCAAAATCGTGGCCGAAGTTCATTTTAAGGGTCGACCATCACATGTGTGACTACTTAACTTCGGGCAAAAGGACACGACTCGCAATCTTGAGTAGTTCCTTGAAAGTTTGGATTATTTTGAAGGTACATATGTTTCAAAAAATACATTTTGACCGAACAAGATTCTCTCTTAAAAATCTATATCTTCAAAACAGACTCTGAATATAACGGCTCAAACCCACCGCTAGCGCCTATCTCTTTGTTACACTCAAGGTAGAAAGTATTCTCAAATTTGAAGTTGAAATCTTTCAGGTTGCAAGAGGATTCACAAGAGGTGCATTTGAGGTGAAATCTTTCACAGATGATAAGTTGAGCAGAAGTGAAAATCAAGCGCCTATCTCTTTGTTACAGCCATTAGAGGGTAGAAGCAACAACTCTAGCAAAAAAGTCACCCTCTTTCCAGTTAAAAAGTGGAAAGGGACTGGAAGATAAAAGGACGACGGGATTTTTGCAGCTCGAAATTTCTAAGCCAAGCTCACTGGATCACAGGTCTTTTTACTTGTCATTATCGCTCAAAAAACGTACGTTACATAAATTACTCATCCTTGGTTATGAGCTGAGATGCCTTCAAAAGTGTGGCAATGGCATATACAGATGGTTGTAGTGCTAATCTAGCAGTTTTGTTCTTCTAGAGGTGAACTTTTATGCTCTTTCTTGGCTGCTCTACAACTGATGTAGCTTCTGGATTCAATTTTGAACGCTATCTATTACTGATAATTGTGATGATTGGTATAAATTCTGAAGTAAAAAGTTCATGGTTCAAAATTTGCTCTCATCCATCACCATGCATCTCTTTTTTTGCTTCTTTTTTCAGCTTTCAATCTTCACTGCTTCTTATAGTCGACATCGATGGCCGACCGTTCTTCGACTATGGGGGAAGGGGGAAGATTCTTTGACAGACAGAAAAGTTTTCCATTCAGACCCTACAGGGGACCTTTTCTTAAAGAAGAGTTTCCTCTTGGGACATCAATATAATGACAATTGAAAGATGGGGGCCAGTAGTAGGAGCTTTTCTGAGTAAAAAGATAATCACCTGAAACAGAAGTGAAATAATGTATGGCATTTGGTGAATGGGACTTTGGACATCCATCTTCACTTGGAAATAAGATCCAAGTTCCTGTGATTCAATGCTCTAATTCCGAGACCACCATGCAGTCCTGAGCTTTTGGAGGCTAA

mRNA sequence

TGTACAACCCTTGTTACTCGTGCCAAAGAAGGCGCCAAGTGAGCGACAAAAGCGAAAATCCTATCGGCTCAGGTTCGCTCCTCTTTCACGACTGTCCTCACGTGTATTTCCCTTCGTTATCCAAAGTAGTAGAGCTCAAGGCTTTTCGCTTTTTTCAAATTCGCTCTCTATGACGGAACTGCCAGTTCCATTTCACCAATTTTGTCTAGCCCTTCATGGGTTCTCCATTTCTCTACCTCTGTGCCTCTGAACTCTATCATCAACCTCGGTTCATGGCTGTTCCTGAAGCTTGTTCGTGGCCTAACCATCTTGTATTGCGCCGCCGCTTGCGCCTCTCTGGCCCTTGGCAACTATGCGCCGACAAGTTTCTATCGCTATCTCCGTATATTTGTCGGCACATGCCTCTTGAAAAGATGAGATTTCGTCTCTGCACAGGGCAGAATCATTATGTTGGAGGGTCGCCTATAATGTCGACTCAAAAAGGAGTATGCAAAGTAGTTTGGACTATTGAAGCTGATTTGGAAGCCGATCAACTTCTTTACTTAACTGGGGACCCTATCGCATTAGGCTCGTGGGAACCAAATATGGCGATACAAATGTCTCATGTGGATCATTCTAACTTATGGAAGGCTGAAGTCAAGATAGCTCGTGGCATAAATTTCAAGTACAATTATTTTATCAAGGAAGAATCATTGCCTTCATCTGTCATCTGGAGAACTGGACCTGAGTTCTCTCTATGCCTACCTCAAACTGCCGAACATAATAAACAAATCGTGGTGAGGGACTCATGGATGAGGTTTGCTATCACACGCCCTTCAGTTTTCACATGGGATTCATGGATAGAGGAACTGCCATCGAAATCTTTTCCACCAGAAGATGAATGTGTATTTGAAGAAGAATGTATTGAGAGTGATTCTATTGAGCCCAACATAAATTTAAATGGTACCGTGATATATGATAAATTATACTCTGATCATGAGGAACTGATGGATTCTACAAGTCAGAGCTCGGAATCTCATAGACATCAACCTATTGAGGAACCGTGGTTAATTCAGCTACCCCTCTTTTTTGATGCATCTAAGAATGTGTTGGAATTGGGACCGGATCTGCTGAAAAATGATGTTATTGTAAAAGAAGAGACGACACTACTAGAAACTCGAGATCACCTATTGGAAGATGCAGCGAATCTGCTGCCTGCAGCTGGGGTTGATACAACGTTGGACCCTATTTCTACCGTCATACTGATTAATTCATCAATATGCACCATGCAGCGGATTGCTGTGTTGGAGGAAGGAAAATTGGTAGAGCTGCTACTGGAACCGGTTAAAAGCAATGTCCAGTGTGATAGTGTGTATTTAGGGGTTGTCTCAAAGCTTGTTCCTCACATGGGTGGTGCATTTGTAAATATTGGAAACACTAGACCTTCTCTAATGGACATTAAGCAAAACAGAGAACCTTTCATCTTCCCTCCTTTTCGTCAAAGGATAAATAAACGAGTGGTCAATGGCTCCATACAAGGACAACTAACATCACAAGATGAAAGTATATTGATTAATACAAAAACCGATGGTGTTGATGACCACGAGGACAATGAAGTTGAGGATGGCTTTGATGTTTCAGAGGTTCTTAGAGAAAATGTGAATGGGAGCGTTGTAGATGATGACGGTGATCTAGATGCCGACTTTGAAGACTGCGTAGATGATAAGGTACATCAAGACGGCAATGCTAGCAACAGTTATTCAGCTACTGCAAATTATTCCCACGGTTCTCAATCGTCTCTTCTCCAAGATGAAAAGGATTCTAAGCAGACAGTAACCGCTGAAAATAAATGGTTCCAAGTTCGGAAAGGCACCAAAATAATAGTGCAGGTTGTCAAAGAGGGGCTAGGGACTAAAGGTCCGACACTGACTGCTTACCCACAGCTAAGAAGCCGATTTTGGATATTGTTAACTCGTTGTGGTAGAATTGGCATCTCCAAGAAAATTTCTGGTGTCGAGCGTACGCGCTTAAGAGTTATAGCTAAAACCTTGCAGCCTCAAGGTTTTGGTTTGACTGTAAGAACAGTTGCTGCTGGTCATTCTTTAGAAGAATTACGAAAAGATTTGGAGGGTCTGATTTCAACATGGAAAACTATAACAGAACATGCAAAATTAGCTGCTCTAGCTGCAGATGAAGGCGTTGAGGGAGCAGTTCCTGTAATTCTCCATAGGGCTATGGGACAAACACTTTCAGTTGTTCAAGATTATTTTAATGAGAAGGTTAAAAGGATGGTAGTCGACTCTCCAAGGACGTATCACGAGGTCACTAATTACCTTCAGGAAATTGCTCCGGATCTATGTGATCGAGTCGAGTTATTTAAGGAAAGAATACCTCTTTTTGATAAATTCAATATTGAAGAGGAAATCAATAGTATGCTCAGTAAAAGGGTTCCACTTGCTAATGGAGGTTCTCTAATAATTGAACAAACTGAGGCTCTAGTTTCCATTGATGTGAATGGAGGGCATGGGGTGTTCGGTCAAGAGACGTCGCAGGAGAAAGCTATTCTAGAGGTCAACCTTGCTGCTGCAAGACAGATAGCAAGGGAATTACGATTGAGAGATATTGGTGGAATAATTGTTGTAGATTTCATTGACATGGCAGACGAATCAAATAAGAGGTTAGTCTATGAAGAAATAAAGAAGGCGGTTGAGAGAGACAGGTCGATGGTGAAGGTTTCTGAGTTATCAAGGCATGGACTCATGGAAATTACAAGGAAGAGGGTTCGGCCAAGTGTAACGTTTATGATCAGTGAACCGTGTGCTTGCTGTCATGCAACTGGAAGAGTCGAAGCTTTGGAAACCTCGTTTTCGAAAATCGAGCAGGAAATCTGTCGACAGCTTGCAACAATGAAGCAGAAACCAGATCCCGAAAATCCAAAATCGTGGCCGAAGTTCATTTTAAGGGTCGACCATCACATGTGTGACTACTTAACTTCGGGCAAAAGGACACGACTCGCAATCTTGAGTAGTTCCTTGAAAGTTTGGATTATTTTGAAGGTTGCAAGAGGATTCACAAGAGGTGCATTTGAGGTGAAATCTTTCACAGATGATAAGTTGAGCAGAAGTGAAAATCAAGCGCCTATCTCTTTGTTACAGCCATTAGAGGGTAGAAGCAACAACTCTAGCAAAAAAGTCACCCTCTTTCCAGTTAAAAAGTGGAAAGGGACTGGAAGATAAAAGGACGACGGGATTTTTGCAGCTCGAAATTTCTAAGCCAAGCTCACTGGATCACAGGTCTTTTTACTTGTCATTATCGCTCAAAAAACGTACGTTACATAAATTACTCATCCTTGGTTATGAGCTGAGATGCCTTCAAAAGTGTGGCAATGGCATATACAGATGGTTGTAGTGCTAATCTAGCAGTTTTGTTCTTCTAGAGCTTTCAATCTTCACTGCTTCTTATAGTCGACATCGATGGCCGACCGTTCTTCGACTATGGGGGAAGGGGGAAGATTCTTTGACAGACAGAAAAGTTTTCCATTCAGACCCTACAGGGGACCTTTTCTTAAAGAAGAGTTTCCTCTTGGGACATCAATATAATGACAATTGAAAGATGGGGGCCAGTAGTAGGAGCTTTTCTGAGTAAAAAGATAATCACCTGAAACAGAAGTGAAATAATGTATGGCATTTGGTGAATGGGACTTTGGACATCCATCTTCACTTGGAAATAAGATCCAAGTTCCTGTGATTCAATGCTCTAATTCCGAGACCACCATGCAGTCCTGAGCTTTTGGAGGCTAA

Coding sequence (CDS)

ATGGGTTCTCCATTTCTCTACCTCTGTGCCTCTGAACTCTATCATCAACCTCGGTTCATGGCTGTTCCTGAAGCTTGTTCGTGGCCTAACCATCTTGTATTGCGCCGCCGCTTGCGCCTCTCTGGCCCTTGGCAACTATGCGCCGACAAGTTTCTATCGCTATCTCCGTATATTTGTCGGCACATGCCTCTTGAAAAGATGAGATTTCGTCTCTGCACAGGGCAGAATCATTATGTTGGAGGGTCGCCTATAATGTCGACTCAAAAAGGAGTATGCAAAGTAGTTTGGACTATTGAAGCTGATTTGGAAGCCGATCAACTTCTTTACTTAACTGGGGACCCTATCGCATTAGGCTCGTGGGAACCAAATATGGCGATACAAATGTCTCATGTGGATCATTCTAACTTATGGAAGGCTGAAGTCAAGATAGCTCGTGGCATAAATTTCAAGTACAATTATTTTATCAAGGAAGAATCATTGCCTTCATCTGTCATCTGGAGAACTGGACCTGAGTTCTCTCTATGCCTACCTCAAACTGCCGAACATAATAAACAAATCGTGGTGAGGGACTCATGGATGAGGTTTGCTATCACACGCCCTTCAGTTTTCACATGGGATTCATGGATAGAGGAACTGCCATCGAAATCTTTTCCACCAGAAGATGAATGTGTATTTGAAGAAGAATGTATTGAGAGTGATTCTATTGAGCCCAACATAAATTTAAATGGTACCGTGATATATGATAAATTATACTCTGATCATGAGGAACTGATGGATTCTACAAGTCAGAGCTCGGAATCTCATAGACATCAACCTATTGAGGAACCGTGGTTAATTCAGCTACCCCTCTTTTTTGATGCATCTAAGAATGTGTTGGAATTGGGACCGGATCTGCTGAAAAATGATGTTATTGTAAAAGAAGAGACGACACTACTAGAAACTCGAGATCACCTATTGGAAGATGCAGCGAATCTGCTGCCTGCAGCTGGGGTTGATACAACGTTGGACCCTATTTCTACCGTCATACTGATTAATTCATCAATATGCACCATGCAGCGGATTGCTGTGTTGGAGGAAGGAAAATTGGTAGAGCTGCTACTGGAACCGGTTAAAAGCAATGTCCAGTGTGATAGTGTGTATTTAGGGGTTGTCTCAAAGCTTGTTCCTCACATGGGTGGTGCATTTGTAAATATTGGAAACACTAGACCTTCTCTAATGGACATTAAGCAAAACAGAGAACCTTTCATCTTCCCTCCTTTTCGTCAAAGGATAAATAAACGAGTGGTCAATGGCTCCATACAAGGACAACTAACATCACAAGATGAAAGTATATTGATTAATACAAAAACCGATGGTGTTGATGACCACGAGGACAATGAAGTTGAGGATGGCTTTGATGTTTCAGAGGTTCTTAGAGAAAATGTGAATGGGAGCGTTGTAGATGATGACGGTGATCTAGATGCCGACTTTGAAGACTGCGTAGATGATAAGGTACATCAAGACGGCAATGCTAGCAACAGTTATTCAGCTACTGCAAATTATTCCCACGGTTCTCAATCGTCTCTTCTCCAAGATGAAAAGGATTCTAAGCAGACAGTAACCGCTGAAAATAAATGGTTCCAAGTTCGGAAAGGCACCAAAATAATAGTGCAGGTTGTCAAAGAGGGGCTAGGGACTAAAGGTCCGACACTGACTGCTTACCCACAGCTAAGAAGCCGATTTTGGATATTGTTAACTCGTTGTGGTAGAATTGGCATCTCCAAGAAAATTTCTGGTGTCGAGCGTACGCGCTTAAGAGTTATAGCTAAAACCTTGCAGCCTCAAGGTTTTGGTTTGACTGTAAGAACAGTTGCTGCTGGTCATTCTTTAGAAGAATTACGAAAAGATTTGGAGGGTCTGATTTCAACATGGAAAACTATAACAGAACATGCAAAATTAGCTGCTCTAGCTGCAGATGAAGGCGTTGAGGGAGCAGTTCCTGTAATTCTCCATAGGGCTATGGGACAAACACTTTCAGTTGTTCAAGATTATTTTAATGAGAAGGTTAAAAGGATGGTAGTCGACTCTCCAAGGACGTATCACGAGGTCACTAATTACCTTCAGGAAATTGCTCCGGATCTATGTGATCGAGTCGAGTTATTTAAGGAAAGAATACCTCTTTTTGATAAATTCAATATTGAAGAGGAAATCAATAGTATGCTCAGTAAAAGGGTTCCACTTGCTAATGGAGGTTCTCTAATAATTGAACAAACTGAGGCTCTAGTTTCCATTGATGTGAATGGAGGGCATGGGGTGTTCGGTCAAGAGACGTCGCAGGAGAAAGCTATTCTAGAGGTCAACCTTGCTGCTGCAAGACAGATAGCAAGGGAATTACGATTGAGAGATATTGGTGGAATAATTGTTGTAGATTTCATTGACATGGCAGACGAATCAAATAAGAGGTTAGTCTATGAAGAAATAAAGAAGGCGGTTGAGAGAGACAGGTCGATGGTGAAGGTTTCTGAGTTATCAAGGCATGGACTCATGGAAATTACAAGGAAGAGGGTTCGGCCAAGTGTAACGTTTATGATCAGTGAACCGTGTGCTTGCTGTCATGCAACTGGAAGAGTCGAAGCTTTGGAAACCTCGTTTTCGAAAATCGAGCAGGAAATCTGTCGACAGCTTGCAACAATGAAGCAGAAACCAGATCCCGAAAATCCAAAATCGTGGCCGAAGTTCATTTTAAGGGTCGACCATCACATGTGTGACTACTTAACTTCGGGCAAAAGGACACGACTCGCAATCTTGAGTAGTTCCTTGAAAGTTTGGATTATTTTGAAGGTTGCAAGAGGATTCACAAGAGGTGCATTTGAGGTGAAATCTTTCACAGATGATAAGTTGAGCAGAAGTGAAAATCAAGCGCCTATCTCTTTGTTACAGCCATTAGAGGGTAGAAGCAACAACTCTAGCAAAAAAGTCACCCTCTTTCCAGTTAAAAAGTGGAAAGGGACTGGAAGATAA

Protein sequence

MGSPFLYLCASELYHQPRFMAVPEACSWPNHLVLRRRLRLSGPWQLCADKFLSLSPYICRHMPLEKMRFRLCTGQNHYVGGSPIMSTQKGVCKVVWTIEADLEADQLLYLTGDPIALGSWEPNMAIQMSHVDHSNLWKAEVKIARGINFKYNYFIKEESLPSSVIWRTGPEFSLCLPQTAEHNKQIVVRDSWMRFAITRPSVFTWDSWIEELPSKSFPPEDECVFEEECIESDSIEPNINLNGTVIYDKLYSDHEELMDSTSQSSESHRHQPIEEPWLIQLPLFFDASKNVLELGPDLLKNDVIVKEETTLLETRDHLLEDAANLLPAAGVDTTLDPISTVILINSSICTMQRIAVLEEGKLVELLLEPVKSNVQCDSVYLGVVSKLVPHMGGAFVNIGNTRPSLMDIKQNREPFIFPPFRQRINKRVVNGSIQGQLTSQDESILINTKTDGVDDHEDNEVEDGFDVSEVLRENVNGSVVDDDGDLDADFEDCVDDKVHQDGNASNSYSATANYSHGSQSSLLQDEKDSKQTVTAENKWFQVRKGTKIIVQVVKEGLGTKGPTLTAYPQLRSRFWILLTRCGRIGISKKISGVERTRLRVIAKTLQPQGFGLTVRTVAAGHSLEELRKDLEGLISTWKTITEHAKLAALAADEGVEGAVPVILHRAMGQTLSVVQDYFNEKVKRMVVDSPRTYHEVTNYLQEIAPDLCDRVELFKERIPLFDKFNIEEEINSMLSKRVPLANGGSLIIEQTEALVSIDVNGGHGVFGQETSQEKAILEVNLAAARQIARELRLRDIGGIIVVDFIDMADESNKRLVYEEIKKAVERDRSMVKVSELSRHGLMEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQEICRQLATMKQKPDPENPKSWPKFILRVDHHMCDYLTSGKRTRLAILSSSLKVWIILKVARGFTRGAFEVKSFTDDKLSRSENQAPISLLQPLEGRSNNSSKKVTLFPVKKWKGTGR
BLAST of Cp4.1LG15g06810 vs. Swiss-Prot
Match: RNE_ARATH (Ribonuclease E/G-like protein, chloroplastic OS=Arabidopsis thaliana GN=RNE PE=1 SV=1)

HSP 1 Score: 1029.2 bits (2660), Expect = 2.9e-299
Identity = 585/993 (58.91%), Postives = 718/993 (72.31%), Query Frame = 1

Query: 54   LSPYICRHMPLEK-MRFRLCTGQNHYVGGSPIM-------------STQKGVCKVVWTIE 113
            LS Y+  H+   K  R  LC G +     S I              S  KG+C+VVW +E
Sbjct: 30   LSSYMFSHVERGKTFRLTLCFGVSRLRPRSAIPLRFLLSVFSEQPPSRLKGLCEVVWIVE 89

Query: 114  ADLEADQLLYLTGDPIALGSWEPNMAIQMSHVDHSNLWKAEVKIARGINFKYNYFIKEES 173
            ADL A++ LY+TGDP  LGSWEP+ AI M   ++ N W+A+VKIA G+NF+YNY +K   
Sbjct: 90   ADLAANEHLYVTGDPSTLGSWEPDCAISMYPTENDNEWEAKVKIASGVNFRYNYLLKAGY 149

Query: 174  LPSS-VIWRTGPEFSLCLPQTAEHNKQIVVRDSWMRFAITRPSV--FTWDSWIEE---LP 233
              SS VIWR GP+FSL +P +   +++I++RDSWM  +I+  S   + W SWI++    P
Sbjct: 150  GSSSDVIWRPGPQFSLSVPSSVNQDRKIIIRDSWMSMSISSKSQESYGWGSWIDDAYLFP 209

Query: 234  SKSFPPEDECVFEEECIESDS-IE-PNINLNGTVIYDKLYSDHEELMDSTSQSSE----- 293
            +   P + E    +EC  +DS IE P  +LN   +  + +   +EL   +S++S      
Sbjct: 210  NCVTPAQSE----DECTSADSAIEVPRTHLNDKQVGAESFLC-DELAAFSSENSNLSALF 269

Query: 294  SHRHQPIEEPWLIQLPLFFDASKNV-LELGPDLLKNDVIVKEETTLLETRDHLLEDAANL 353
            S  +QPIEEPWLIQ  +     +N+  +   D+   D    E     + ++H L +   L
Sbjct: 270  SDNYQPIEEPWLIQESITLQHERNMQTDSEQDVESCDD--NENNLNTDEQNHQLTET--L 329

Query: 354  LPAAGVDTTLDPISTVILINSSICTMQRIAVLEEGKLVELLLEPVKSNVQCDSVYLGVVS 413
            LP  G   + + I+T ILINSSICT+QRIAVLE GKLVELLLEPVK+NVQCDSVYLGV++
Sbjct: 330  LPDGGFFQS-ESIATTILINSSICTVQRIAVLEGGKLVELLLEPVKTNVQCDSVYLGVIT 389

Query: 414  KLVPHMGGAFVNIGNTRPSLMDIKQNREPFIFPPFRQRINKRVVNGS------------- 473
            K VPHMGGAFVNIG+ R S MDIK NREPFIFPPF     K+  +GS             
Sbjct: 390  KFVPHMGGAFVNIGSARHSFMDIKSNREPFIFPPFCDGSKKQAADGSPILSMNDIPAPHE 449

Query: 474  IQGQLTSQDESILI----NTKTDGVDDHEDNEVEDGFDVSEVLRENVNGSVVDDDGDLDA 533
            I+      + S L+    N   +   D +D    D + VS+ L   VNG+VV+  G ++ 
Sbjct: 450  IEHASYDFEASSLLDIDSNDPGESFHDDDDEHENDEYHVSDHLAGLVNGTVVNH-GAVEV 509

Query: 534  DFEDCVDDKVHQDGNASNSYSATANYSHGSQSSLLQDEKDSKQTVTAENKWFQVRKGTKI 593
              E+       + G++++S  + A+ +           K SK   + +NKW QVRKGTKI
Sbjct: 510  GSEN--GHIPMERGHSADSLDSNASVA-----------KASKVMSSKDNKWIQVRKGTKI 569

Query: 594  IVQVVKEGLGTKGPTLTAYPQLRSRFWILLTRCGRIGISKKISGVERTRLRVIAKTLQPQ 653
            IVQVVKEGLGTKGPTLTAYP+LRSRFW+LLTRC RIG+SKKISGVERTRL+VIAKTLQPQ
Sbjct: 570  IVQVVKEGLGTKGPTLTAYPKLRSRFWVLLTRCKRIGVSKKISGVERTRLKVIAKTLQPQ 629

Query: 654  GFGLTVRTVAAGHSLEELRKDLEGLISTWKTITEHAKLAALAADEGVEGAVPVILHRAMG 713
            GFGLTVRTVAAGHSLEEL+KDL+GL+ TWK IT+ AK AALAADEGVEGA+P +LHRAMG
Sbjct: 630  GFGLTVRTVAAGHSLEELQKDLDGLLLTWKNITDEAKSAALAADEGVEGAIPALLHRAMG 689

Query: 714  QTLSVVQDYFNEKVKRMVVDSPRTYHEVTNYLQEIAPDLCDRVELFKERIPLFDKFNIEE 773
            QTLSVVQDYFN+KV++MVVDSPRTYHEVT+YLQ++APDLC+RVEL  + IPLFD + IEE
Sbjct: 690  QTLSVVQDYFNDKVEKMVVDSPRTYHEVTHYLQDMAPDLCNRVELHDKGIPLFDLYEIEE 749

Query: 774  EINSMLSKRVPLANGGSLIIEQTEALVSIDVNGGHGVFGQETSQEKAILEVNLAAARQIA 833
            EI  +LSKRVPL+NGGSL+IEQTEALVSIDVNGGHG+FGQ  SQEKAILEVNLAAARQIA
Sbjct: 750  EIEGILSKRVPLSNGGSLVIEQTEALVSIDVNGGHGMFGQGNSQEKAILEVNLAAARQIA 809

Query: 834  RELRLRDIGGIIVVDFIDMADESNKRLVYEEIKKAVERDRSMVKVSELSRHGLMEITRKR 893
            RE+RLRDIGGIIVVDFIDMADESNKRLVYEE+KKAVERDRS+VKVSELSRHGLMEITRKR
Sbjct: 810  REIRLRDIGGIIVVDFIDMADESNKRLVYEEVKKAVERDRSLVKVSELSRHGLMEITRKR 869

Query: 894  VRPSVTFMISEPCACCHATGRVEALETSFSKIEQEICRQLATMKQKPDPENPKSWPKFIL 953
            VRPSVTFMISEPC+CCHATGRVEALET+FSKIEQEICRQLA M+++ D ENPKSWP+FIL
Sbjct: 870  VRPSVTFMISEPCSCCHATGRVEALETTFSKIEQEICRQLAKMEKRGDLENPKSWPRFIL 929

Query: 954  RVDHHMCDYLTSGKRTRLAILSSSLKVWIILKVARGFTRGAFEVKSFTDDK-LSRSENQA 1000
            RVD HM  +LT+GKRTRLAILSSSLKVWI+LKVAR FTRG FEVK F D+K ++  ++Q 
Sbjct: 930  RVDSHMSSFLTTGKRTRLAILSSSLKVWILLKVARHFTRGTFEVKPFMDEKTVNERQHQV 989

BLAST of Cp4.1LG15g06810 vs. Swiss-Prot
Match: RNE_HAEIN (Ribonuclease E OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=rne PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 5.5e-56
Identity = 123/345 (35.65%), Postives = 199/345 (57.68%), Query Frame = 1

Query: 544 KGTKIIVQVVKEGLGTKGPTLTAYPQLRSRFWILLTRCGRIG-ISKKISGVERTRLRVIA 603
           +G ++IVQV KE  G KG  LT +  L   + +L+    R G IS++I G ERT L+   
Sbjct: 96  EGQEVIVQVNKEERGNKGAALTTFVSLAGSYLVLMPNNPRAGGISRRIEGDERTELKEAL 155

Query: 604 KTLQ-PQGFGLTVRTVAAGHSLEELRKDLEGLISTWKTITEHAKLAALAADEGVEGAVPV 663
            +L  P G GL VRT   G S EEL+ DL+ L+  W+ I + ++              P 
Sbjct: 156 SSLDVPDGVGLIVRTAGVGKSPEELQWDLKVLLHHWEAIKQASQ----------SRPAPF 215

Query: 664 ILHRAMGQTLSVVQDYFNEKVKRMVVDSPRTYHEVTNYLQEIAPDLCDRVELFKERIPLF 723
           ++H+     +  ++DY    +  +++DSP+ + +   +++ + PD  +RV+L++  +PLF
Sbjct: 216 LIHQESDVIVRAIRDYLRRDIGEILIDSPKIFEKAKEHIKLVRPDFINRVKLYQGEVPLF 275

Query: 724 DKFNIEEEINSMLSKRVPLANGGSLIIEQTEALVSIDVNGGHGVFGQETSQEKAILEVNL 783
             + IE +I S   + V L +GGS++I+ TEAL +ID+N      G +   E+  L  NL
Sbjct: 276 SHYQIESQIESAFQREVRLPSGGSIVIDVTEALTAIDINSARSTRGGDI--EETALNTNL 335

Query: 784 AAARQIARELRLRDIGGIIVVDFIDMADESNKRLVYEEIKKAVERDRSMVKVSELSRHGL 843
            AA +IAR+LRLRD+GG++V+DFIDM    ++R V   I+ AV  DR+ +++S +SR GL
Sbjct: 336 EAADEIARQLRLRDLGGLVVIDFIDMTPIRHQREVENRIRDAVRPDRARIQISRISRFGL 395

Query: 844 MEITRKRVRPSVTFMISEPCACCHATGRV---EALETSFSKIEQE 884
           +E++R+R+ PS+       C  C  TG+V   E+L  S  ++ +E
Sbjct: 396 LEMSRQRLSPSLGESSHHICPRCQGTGKVRDNESLSLSILRLLEE 428

BLAST of Cp4.1LG15g06810 vs. Swiss-Prot
Match: RNG_HAEIN (Ribonuclease G OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=rng PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 7.9e-55
Identity = 125/346 (36.13%), Postives = 195/346 (56.36%), Query Frame = 1

Query: 542 VRKGTKIIVQVVKEGLGTKGPTLTAYPQLRSRFWILLTRCGRIGISKKI-SGVERTRLRV 601
           VR+G  I+VQVVKE LGTKG  LT    L SR  + +     +G+S++I S  ER RL+ 
Sbjct: 98  VREGQDIVVQVVKEPLGTKGARLTTDITLPSRHLVFMPENSHVGVSQRIESEEERARLKA 157

Query: 602 IAKTLQPQGFGLTVRTVAAGHSLEELRKDLEGLISTWKTITEHAKLAALAADEGVEGAVP 661
           + +    +  G  +RT   G S EELR+D E L   W+ + E        +    E A+P
Sbjct: 158 LVEPFCDELGGFIIRTATEGASEEELRQDAEFLKRLWRKVLERKSKYPTKSKIYGEPALP 217

Query: 662 VILHRAMGQTLSVVQDYFNEKVKRMVVDSPRTYHEVTNYLQEIAPDLCDRVELFKERIPL 721
                       +++D+    ++++ +DS   + EV  +  E  P+L D++ L+    P+
Sbjct: 218 ----------QRILRDFIGTNLEKIRIDSKLCFGEVKEFTDEFMPELSDKLVLYSGNQPI 277

Query: 722 FDKFNIEEEINSMLSKRVPLANGGSLIIEQTEALVSIDVNGGHGVFGQETSQEKAILEVN 781
           FD + +E  I + L KRV L +GG LIIEQTEA+ +ID+N   G F    + E+ I   N
Sbjct: 278 FDVYGVENAIQTALDKRVNLKSGGYLIIEQTEAMTTIDIN--TGAFVGHRNLEETIFNTN 337

Query: 782 LAAARQIARELRLRDIGGIIVVDFIDMADESNKRLVYEEIKKAVERDRSMVKVSELSRHG 841
           + A + IA EL+LR++GGII++DFIDM  + ++  V + +  A+ +DR    V+  ++ G
Sbjct: 338 IEATKAIAHELQLRNLGGIIIIDFIDMQTDEHRNRVLQSLCDALSKDRMKTNVNGFTQLG 397

Query: 842 LMEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQEICR 887
           L+E+TRKR R S+  ++ + C  CH  GRV+ +ET   +I +EI R
Sbjct: 398 LVEMTRKRTRESLEHVLCDECPTCHGRGRVKTVETVCYEIMREIIR 431

BLAST of Cp4.1LG15g06810 vs. Swiss-Prot
Match: RNG_SHIFL (Ribonuclease G OS=Shigella flexneri GN=rng PE=3 SV=2)

HSP 1 Score: 210.7 bits (535), Expect = 7.4e-53
Identity = 125/347 (36.02%), Postives = 195/347 (56.20%), Query Frame = 1

Query: 542 VRKGTKIIVQVVKEGLGTKGPTLTAYPQLRSRFWILLTRCGRIGISKKI-SGVERTRLR- 601
           VR+G  ++VQVVK+ LGTKG  LT    L SR+ + +     +G+S++I S  ER RL+ 
Sbjct: 97  VRQGQDLMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIESESERERLKK 156

Query: 602 VIAKTLQPQGFGLTVRTVAAGHSLEELRKDLEGLISTWKTITEHAKLAALAADEGVEGAV 661
           V+A+    QG G  +RT A G    EL  D   L   W  + E  K              
Sbjct: 157 VVAEYCDEQG-GFIIRTAAEGVGEAELASDAAYLKRVWTKVMERKKRPQTRYQ------- 216

Query: 662 PVILHRAMGQTLSVVQDYFNEKVKRMVVDSPRTYHEVTNYLQEIAPDLCDRVELFKERIP 721
              L+  +     V++D+ + ++ R+ VDS  TY  +  +  E  P++  ++E +  R P
Sbjct: 217 ---LYGELALAQRVLRDFADAELDRIRVDSRLTYEALLEFTSEYIPEMTSKLEHYTGRQP 276

Query: 722 LFDKFNIEEEINSMLSKRVPLANGGSLIIEQTEALVSIDVNGGHGVFGQETSQEKAILEV 781
           +FD F++E EI   L ++V L +GG LII+QTEA+ ++D+N G   F    + +  I   
Sbjct: 277 IFDLFDVENEIQRALERKVELKSGGYLIIDQTEAMTTVDINTG--AFVGHRNLDDTIFNT 336

Query: 782 NLAAARQIARELRLRDIGGIIVVDFIDMADESNKRLVYEEIKKAVERDRSMVKVSELSRH 841
           N+ A + IAR+LRLR++GGII++DFIDM +E ++R V   +++A+ +DR    V+  S  
Sbjct: 337 NIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSVNGFSAL 396

Query: 842 GLMEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQEICR 887
           GL+E+TRKR R S+  ++   C  CH  G V+ +ET   +I +EI R
Sbjct: 397 GLVEMTRKRTRESIEHVLCNECPTCHGRGTVKTVETVCYEIMREIVR 430

BLAST of Cp4.1LG15g06810 vs. Swiss-Prot
Match: RNG_ECOLI (Ribonuclease G OS=Escherichia coli (strain K12) GN=rng PE=1 SV=2)

HSP 1 Score: 210.7 bits (535), Expect = 7.4e-53
Identity = 125/347 (36.02%), Postives = 195/347 (56.20%), Query Frame = 1

Query: 542 VRKGTKIIVQVVKEGLGTKGPTLTAYPQLRSRFWILLTRCGRIGISKKI-SGVERTRLR- 601
           VR+G  ++VQVVK+ LGTKG  LT    L SR+ + +     +G+S++I S  ER RL+ 
Sbjct: 97  VRQGQDLMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIESESERERLKK 156

Query: 602 VIAKTLQPQGFGLTVRTVAAGHSLEELRKDLEGLISTWKTITEHAKLAALAADEGVEGAV 661
           V+A+    QG G  +RT A G    EL  D   L   W  + E  K              
Sbjct: 157 VVAEYCDEQG-GFIIRTAAEGVGEAELASDAAYLKRVWTKVMERKKRPQTRYQ------- 216

Query: 662 PVILHRAMGQTLSVVQDYFNEKVKRMVVDSPRTYHEVTNYLQEIAPDLCDRVELFKERIP 721
              L+  +     V++D+ + ++ R+ VDS  TY  +  +  E  P++  ++E +  R P
Sbjct: 217 ---LYGELALAQRVLRDFADAELDRIRVDSRLTYEALLEFTSEYIPEMTSKLEHYTGRQP 276

Query: 722 LFDKFNIEEEINSMLSKRVPLANGGSLIIEQTEALVSIDVNGGHGVFGQETSQEKAILEV 781
           +FD F++E EI   L ++V L +GG LII+QTEA+ ++D+N G   F    + +  I   
Sbjct: 277 IFDLFDVENEIQRALERKVELKSGGYLIIDQTEAMTTVDINTG--AFVGHRNLDDTIFNT 336

Query: 782 NLAAARQIARELRLRDIGGIIVVDFIDMADESNKRLVYEEIKKAVERDRSMVKVSELSRH 841
           N+ A + IAR+LRLR++GGII++DFIDM +E ++R V   +++A+ +DR    V+  S  
Sbjct: 337 NIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSVNGFSAL 396

Query: 842 GLMEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQEICR 887
           GL+E+TRKR R S+  ++   C  CH  G V+ +ET   +I +EI R
Sbjct: 397 GLVEMTRKRTRESIEHVLCNECPTCHGRGTVKTVETVCYEIMREIVR 430

BLAST of Cp4.1LG15g06810 vs. TrEMBL
Match: A0A0A0LHN6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G079650 PE=4 SV=1)

HSP 1 Score: 1634.4 bits (4231), Expect = 0.0e+00
Identity = 846/998 (84.77%), Postives = 889/998 (89.08%), Query Frame = 1

Query: 20   MAVPEACSWPNHLVLRRRLRLSGPWQLCADKFLSLSPYICRHMPLEKMRFRLCTGQNHYV 79
            M VPEACS  +HLVL RR  LS PW  CA KFLS SP I  HM L KM FRLCTGQN+YV
Sbjct: 1    MGVPEACSSSHHLVLHRRFHLSHPWPPCAHKFLSPSPCIHLHMTLGKMMFRLCTGQNNYV 60

Query: 80   GGSPIMSTQKGVCKVVWTIEADLEADQLLYLTGDPIALGSWEPNMAIQMSHVDHSNLWKA 139
            GGSP+MST KGVCKVVWTIEADLE DQLLYLTGDPI LGSWEPNMAIQMS   H+NLWKA
Sbjct: 61   GGSPVMSTIKGVCKVVWTIEADLEVDQLLYLTGDPITLGSWEPNMAIQMSPTHHANLWKA 120

Query: 140  EVKIARGINFKYNYFIKEESLPSS-VIWRTGPEFSLCLPQTAEHNKQIVVRDSWMRFAIT 199
            E KI  GINFKYNYFIK+E+LPSS +IWRTGPEFSL LPQT  H+K I VRDSWMRFA+T
Sbjct: 121  EAKITCGINFKYNYFIKDEALPSSDIIWRTGPEFSLSLPQTVNHDKHITVRDSWMRFAVT 180

Query: 200  RPSVFTWDSWIEELPSKSFPPEDECVFEEECIESDSIEPNINLNGTVIYDKLYSDHEELM 259
             PSVFTWDSWIEELP KS P EDE   EEEC+ESDSIEP +NLNGT+IYDKLYSDHEELM
Sbjct: 181  PPSVFTWDSWIEELPLKSLPAEDERKIEEECLESDSIEPYVNLNGTMIYDKLYSDHEELM 240

Query: 260  DSTSQSSESHRHQPIEEPWLIQLPLFFDASKNVLELGPDLLKNDVIVKEETTLLETRDHL 319
            DSTSQSS+ HRHQP+EEPWL   PL F   KNVLE  PDLLKNDV +KEE T+LETRD L
Sbjct: 241  DSTSQSSDFHRHQPVEEPWL---PLSFYLPKNVLE--PDLLKNDVSIKEEATVLETRDPL 300

Query: 320  LEDAANLLPAAGVDTTL-DPISTVILINSSICTMQRIAVLEEGKLVELLLEPVKSNVQCD 379
            LEDAANLLP +G DT L DPIST+ILINSSICTMQRIAVLEEGKLVELLLEPVKSNVQCD
Sbjct: 301  LEDAANLLPTSGADTMLKDPISTIILINSSICTMQRIAVLEEGKLVELLLEPVKSNVQCD 360

Query: 380  SVYLGVVSKLVPHMGGAFVNIGNTRPSLMDIKQNREPFIFPPFRQRINKRVVNG-SIQGQ 439
            SVYLGVVSKLVPHMGGAFVNIGN+RPSLMDIKQNREPFIFPPF QR+NK+V+N  SIQGQ
Sbjct: 361  SVYLGVVSKLVPHMGGAFVNIGNSRPSLMDIKQNREPFIFPPFCQRVNKQVINDCSIQGQ 420

Query: 440  LTSQDESILINTKTDGV--------------DDHEDNEVEDGFDVSEVLRENVNGSVVDD 499
            LTS  ESIL   K DGV              DDHEDNEVEDGFDV EV RENVNGS+VDD
Sbjct: 421  LTSLGESILSIPKNDGVADIEIQNTSMLSVLDDHEDNEVEDGFDVLEV-RENVNGSIVDD 480

Query: 500  DGDLDADFEDCVDDKVHQ-DGNASNSYSATANYSHGSQSSLLQDEKDSKQTVTAENKWFQ 559
            DGDLDADFEDC+DDK H  +G+AS SYSATA+YS  SQ S LQ  KDSKQ VT ENKW Q
Sbjct: 481  DGDLDADFEDCIDDKAHHLEGHASISYSATASYSSDSQLSFLQYGKDSKQIVTDENKWLQ 540

Query: 560  VRKGTKIIVQVVKEGLGTKGPTLTAYPQLRSRFWILLTRCGRIGISKKISGVERTRLRVI 619
            VRKGTKIIVQVVKEGLGTK P LTAYP+LRSRFWILLTRC RIGISKKISGVERTRLRVI
Sbjct: 541  VRKGTKIIVQVVKEGLGTKSPMLTAYPRLRSRFWILLTRCDRIGISKKISGVERTRLRVI 600

Query: 620  AKTLQPQGFGLTVRTVAAGHSLEELRKDLEGLISTWKTITEHAKLAALAADEGVEGAVPV 679
            AKTLQPQGFGLTVRTVAAGHSLEEL+KDL+GLISTWKTITE+AK AALAADEGVEGAVPV
Sbjct: 601  AKTLQPQGFGLTVRTVAAGHSLEELQKDLDGLISTWKTITENAKSAALAADEGVEGAVPV 660

Query: 680  ILHRAMGQTLSVVQDYFNEKVKRMVVDSPRTYHEVTNYLQEIAPDLCDRVELFKERIPLF 739
            ILHRAMGQTLSVVQDYFN+KVKRMVVDSPRTYHEVTNYLQEIAPDLCDRVELF  RIPLF
Sbjct: 661  ILHRAMGQTLSVVQDYFNDKVKRMVVDSPRTYHEVTNYLQEIAPDLCDRVELFHGRIPLF 720

Query: 740  DKFNIEEEINSMLSKRVPLANGGSLIIEQTEALVSIDVNGGHGVFGQETSQEKAILEVNL 799
            DKFNIEEEINS++SKRVPL NGGSLIIEQTEALVSIDVNGGHGVFGQ +SQE AILEVNL
Sbjct: 721  DKFNIEEEINSIISKRVPLVNGGSLIIEQTEALVSIDVNGGHGVFGQASSQENAILEVNL 780

Query: 800  AAARQIARELRLRDIGGIIVVDFIDMADESNKRLVYEEIKKAVERDRSMVKVSELSRHGL 859
            AAARQIARELRLRDIGGIIVVDFIDM DESNKRLVYEE+KKAVERDRS+VKVSELSRHGL
Sbjct: 781  AAARQIARELRLRDIGGIIVVDFIDMEDESNKRLVYEEVKKAVERDRSIVKVSELSRHGL 840

Query: 860  MEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQEICRQLATMKQKPDPENPK 919
            MEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQEICRQLAT+KQKPDP+NPK
Sbjct: 841  MEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQEICRQLATLKQKPDPDNPK 900

Query: 920  SWPKFILRVDHHMCDYLTSGKRTRLAILSSSLKVWIILKVARGFTRGAFEVKSFTDDKLS 979
            SWPKF+LRVDHHMC+YLTSGKRTRLA+LSSSLKVWIILKVARGFTRG+FEVK F DDKLS
Sbjct: 901  SWPKFVLRVDHHMCEYLTSGKRTRLAVLSSSLKVWIILKVARGFTRGSFEVKYFADDKLS 960

Query: 980  RSENQAPISLLQPLEGRSNNSSKKVTLFPVKKWKGTGR 1000
            RSENQAPISLLQPLEGRSNNS KKVTLFPVKKWKGT R
Sbjct: 961  RSENQAPISLLQPLEGRSNNSGKKVTLFPVKKWKGTRR 992

BLAST of Cp4.1LG15g06810 vs. TrEMBL
Match: F6HHQ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0057g01320 PE=4 SV=1)

HSP 1 Score: 1184.5 bits (3063), Expect = 0.0e+00
Identity = 646/1017 (63.52%), Postives = 766/1017 (75.32%), Query Frame = 1

Query: 29   PNHLVLRRRLRLSGPWQLCADKFLSLSPYICRHMPLEK--MRFRLCTGQNHYVGGSPIMS 88
            P+H   RR L L  P          L PY   HMPLE    RF LC G ++ V  S I S
Sbjct: 17   PSH---RRHLHLLSPRSSLFPSDRLLFPYFYHHMPLENNVYRFTLCVGTHNSVLKSSIKS 76

Query: 89   TQKG--------VCKVVWTIEADLEADQLLYLTGDPIALGSWEPNMAIQMSHVDHSNLWK 148
             +KG        +CKV+WTIEADLE  QLLY+TGDP  LG WEP+MA+ MS  +H+NLWK
Sbjct: 77   MRKGNSSTAFKGLCKVIWTIEADLEDGQLLYITGDPNVLGCWEPDMAVLMSPTEHTNLWK 136

Query: 149  AEVKIARGINFKYNYFIKEESLPS-SVIWRTGPEFSLCLPQTAEHNKQIVVRDSWMRFAI 208
            AEVKI  GINFKYNYF+K ++ PS  +IW+ GPEFSL +P   + +K+I+VRDSWM    
Sbjct: 137  AEVKITCGINFKYNYFLKGDAWPSCDIIWKPGPEFSLLVPLHGKQDKKIMVRDSWMTSNA 196

Query: 209  TRPSVFTWDSWIEE--LPSKSF--PP---EDECVFEEECIESDSIEPNINLNGTVIYDKL 268
             RPS   W SW+E+   P++    PP   EDE     +C++SDS+   + L+   + DK 
Sbjct: 197  RRPSAHIWGSWMEDSYFPAEHLISPPSRDEDEIA---KCLKSDSLS-KLFLDDLSVEDKS 256

Query: 269  YSDHEELMDSTSQSSESH-----RHQPIEEPWLIQLPLFFDASKNVLELGPDLLKNDVIV 328
            +SD+E+ + + S+  +S+     R QP+EEPWL+Q  L   ASK   E+  ++ KN    
Sbjct: 257  FSDNEDTISAMSKGLDSNGTVSMRDQPVEEPWLLQSSLI--ASKE--EMVSNMSKNIDAA 316

Query: 329  KEETTLLETRDHLLEDAANLLPAAGVDTTL--DPISTVILINSSICTMQRIAVLEEGKLV 388
            + E + L+  D        LLP  G +     D +STVILINSSICTMQRIAVLE+G LV
Sbjct: 317  QVEVSHLKLLDQSYLHTEKLLPEEGTNLISKDDSVSTVILINSSICTMQRIAVLEDGSLV 376

Query: 389  ELLLEPVKSNVQCDSVYLGVVSKLVPHMGGAFVNIGNTRPSLMDIKQNREPFIFPPF--- 448
            ELLLEPVKSNVQCDSVYLGVV+KLVPHMGGAFVNIG++RPSLMDIK++REPFIFPPF   
Sbjct: 377  ELLLEPVKSNVQCDSVYLGVVTKLVPHMGGAFVNIGSSRPSLMDIKRSREPFIFPPFHHG 436

Query: 449  -RQRINKRVVNGSIQGQLTSQDESILINTKTDGV--------------DDHEDNEVEDGF 508
             +++ N  V N   +  +  ++E    + + D +              DD E++EVED F
Sbjct: 437  TKEKDNGSVFNTLRENPIAHENEHTSYDVEADDLREVDFQDDPVQFAHDDFEEHEVEDDF 496

Query: 509  DVSEVLRENVNGSVVDDDGDLDADFEDCVDD-KVHQDGNASNSYSATANYS--HGSQSSL 568
            DV  ++++++NGS+VD  G ++ DF+D  D  + H D    N++         H SQ   
Sbjct: 497  DV--LIKKDLNGSIVDHGG-VEVDFDDYSDGIENHIDSETINNFLPVELEKGFHDSQLPP 556

Query: 569  LQDEKDSKQTVTAENKWFQVRKGTKIIVQVVKEGLGTKGPTLTAYPQLRSRFWILLTRCG 628
            L + KDS+Q  T ENKW QV+KGTKIIVQVVKEGLGTKGPTLTAYP+LRSRFW+LLT C 
Sbjct: 557  LLEMKDSRQAYTVENKWAQVQKGTKIIVQVVKEGLGTKGPTLTAYPKLRSRFWVLLTCCN 616

Query: 629  RIGISKKISGVERTRLRVIAKTLQPQGFGLTVRTVAAGHSLEELRKDLEGLISTWKTITE 688
            RIG+SKKISGVERTRLRVIAKTLQP+GFGLTVRTVAAGH+LEEL+KDLEGL+STWK I E
Sbjct: 617  RIGVSKKISGVERTRLRVIAKTLQPKGFGLTVRTVAAGHTLEELQKDLEGLLSTWKNIVE 676

Query: 689  HAKLAALAADEGVEGAVPVILHRAMGQTLSVVQDYFNEKVKRMVVDSPRTYHEVTNYLQE 748
            HAK AALAADEGVEGA+PVILHRAMGQTLSVVQDYFNEKV+ MVVDSPRTYHEVTNYLQE
Sbjct: 677  HAKSAALAADEGVEGAIPVILHRAMGQTLSVVQDYFNEKVESMVVDSPRTYHEVTNYLQE 736

Query: 749  IAPDLCDRVELFKERIPLFDKFNIEEEINSMLSKRVPLANGGSLIIEQTEALVSIDVNGG 808
            IAPDLCDRVEL+ +R+PLFD+FNIEEEIN++LSKRVPL NGGSL+IEQTEALVSIDVNGG
Sbjct: 737  IAPDLCDRVELYNKRVPLFDEFNIEEEINNILSKRVPLPNGGSLVIEQTEALVSIDVNGG 796

Query: 809  HGVFGQETSQEKAILEVNLAAARQIARELRLRDIGGIIVVDFIDMADESNKRLVYEEIKK 868
            HG+ G  TSQEKAIL+VNLAAA+QIARELRLRDIGGIIVVDFIDM D+SNKRLVYEE+KK
Sbjct: 797  HGMLGNGTSQEKAILDVNLAAAKQIARELRLRDIGGIIVVDFIDMLDDSNKRLVYEEVKK 856

Query: 869  AVERDRSMVKVSELSRHGLMEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQ 928
            AVERDRSMVKVSELSRHGLMEITRKRVRPSVTFMISEPC+CCH TGRVEALETSFSKIEQ
Sbjct: 857  AVERDRSMVKVSELSRHGLMEITRKRVRPSVTFMISEPCSCCHGTGRVEALETSFSKIEQ 916

Query: 929  EICRQLATMKQKPDPENPKSWPKFILRVDHHMCDYLTSGKRTRLAILSSSLKVWIILKVA 988
            EICR LA  ++K DPENP SWP+FIL VD  MC+YLTSGKRTRLAILSSSLKVWI+LKVA
Sbjct: 917  EICRLLAMTEEKADPENPNSWPRFILMVDRFMCNYLTSGKRTRLAILSSSLKVWILLKVA 976

Query: 989  RGFTRGAFEVKSFTDDKLSRSENQAPISLLQPLEGRSNNSSKKVTLFPVKKWKGTGR 1000
            RGFTRGAFEVK FTDDK++ S +Q PIS+L+P E  + N  + VTLFP+KKWK  G+
Sbjct: 977  RGFTRGAFEVKPFTDDKVNISSHQGPISMLRPTEAGTYNPRRNVTLFPIKKWKTGGK 1019

BLAST of Cp4.1LG15g06810 vs. TrEMBL
Match: V4UFK8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014166mg PE=4 SV=1)

HSP 1 Score: 1164.8 bits (3012), Expect = 0.0e+00
Identity = 632/950 (66.53%), Postives = 740/950 (77.89%), Query Frame = 1

Query: 82  SPIMSTQKG--------VCKVVWTIEADLEADQLLYLTGDPIALGSWEPNMAIQMSHVDH 141
           SPIMS  +G        +C++VWT+EADLEA QLLY+TGDP  LG W+P+MAI MS  +H
Sbjct: 17  SPIMSANRGKSASAIQGLCEIVWTVEADLEAGQLLYITGDPSVLGCWDPDMAILMSPTEH 76

Query: 142 SNLWKAEVKIARGINFKYNYFIKEESLPSS-VIWRTGPEFSLCLPQTAEHNKQIVVRDSW 201
            NLWKAEVKIA G+NFKYN+F+K E+  S  +IWR GPEFSL +P     +++I+VRDSW
Sbjct: 77  ENLWKAEVKIACGVNFKYNFFMKGETWSSGDIIWRGGPEFSLLVP--FNQDRKILVRDSW 136

Query: 202 MRFAITRPSVFTWDSWIEE--LPSKS---FPPEDECVFEEECIESDSIEPNINLNGTVIY 261
           MRF         WDSWIEE  +P KS    P  D+ + +   +ESDS E     N     
Sbjct: 137 MRFNTKNSPTHIWDSWIEETYIPVKSPISVPETDDEIVKH--LESDSTESEPFWNDLTHA 196

Query: 262 DKLYSDHEELMDSTSQSSE-----SHRHQPIEEPWLIQLPLFFDASKNVLELGPDLLKND 321
           D+LYS +++   +T + S      S R QPIEEPWL Q        ++ ++  PD+ +  
Sbjct: 197 DQLYS-YDDGKTATHEVSNFDMALSERDQPIEEPWLFQSSPILLVYEDTVK--PDMPEKS 256

Query: 322 VIVKEETTLLETRDHLLEDAANLLPAAGVDTTLDP-ISTVILINSSICTMQRIAVLEEGK 381
              K+E  +L++ +   +D  +LLP  G   + D  +STVILINSSICTMQRIAVLE+ K
Sbjct: 257 NNEKDEAMILDSDNQKFQDTESLLPEKGSLISKDNFVSTVILINSSICTMQRIAVLEDEK 316

Query: 382 LVELLLEPVKSNVQCDSVYLGVVSKLVPHMGGAFVNIGNTRPSLMDIKQNREPFIFPPFR 441
           LVELLLEPVKSNVQCDSVYLGVV+KLVP+MGGAFVNIGN+RPSLMDIK  REPFIFPPFR
Sbjct: 317 LVELLLEPVKSNVQCDSVYLGVVTKLVPNMGGAFVNIGNSRPSLMDIKHYREPFIFPPFR 376

Query: 442 QRINKRVVNGSIQGQL-----TSQDESILINTK----TDGVDD-----HEDNEVEDG--F 501
            R  K+ VNGS    L     T  ++S   NT+     D  DD     H D+E  DG  F
Sbjct: 377 CRTKKQEVNGSASAALEEHAVTYDNDSTSHNTEDVAEADSQDDLVQFEHNDDEEHDGDDF 436

Query: 502 DVSEVLRENVNGSVVDDDGDLDADFEDCVDDKVHQDGNASNSYSATANYSHGSQSSLLQD 561
           DVSEVL+ NVNGS++DD G+ +ADFED ++   H DG ++  +S+ +     S +S  Q 
Sbjct: 437 DVSEVLK-NVNGSIIDD-GEPEADFEDFLEGDHHLDGESNGFFSSKSEVPDDSHTSHPQG 496

Query: 562 EKDSKQTVTAENKWFQVRKGTKIIVQVVKEGLGTKGPTLTAYPQLRSRFWILLTRCGRIG 621
            KDSK T   E  W QV+KGTK+IVQVVKEGLGTKGPTLTAYP+LRSRFWIL+T C RIG
Sbjct: 497 TKDSKHTPD-EKTWLQVQKGTKVIVQVVKEGLGTKGPTLTAYPKLRSRFWILITSCDRIG 556

Query: 622 ISKKISGVERTRLRVIAKTLQPQGFGLTVRTVAAGHSLEELRKDLEGLISTWKTITEHAK 681
           +S+KI+GVERTRL+VIAKTLQP+GFGLT+RTVAAGHSLEEL+KDLEGL+STWK I EHAK
Sbjct: 557 VSRKITGVERTRLKVIAKTLQPEGFGLTIRTVAAGHSLEELQKDLEGLLSTWKNIMEHAK 616

Query: 682 LAALAADEGVEGAVPVILHRAMGQTLSVVQDYFNEKVKRMVVDSPRTYHEVTNYLQEIAP 741
            AALAADEGVEGAVP++LHRAMGQTLS+VQDYFNEKVK+MVVDSPRTYHEVT+YLQ+IAP
Sbjct: 617 SAALAADEGVEGAVPILLHRAMGQTLSIVQDYFNEKVKKMVVDSPRTYHEVTSYLQDIAP 676

Query: 742 DLCDRVELFKERIPLFDKFNIEEEINSMLSKRVPLANGGSLIIEQTEALVSIDVNGGHGV 801
           DLCDRVEL+ +RIPLFDKFNIEEEIN+MLSKRVPL NGGSL+IEQTEALVSIDVNGGHG+
Sbjct: 677 DLCDRVELYDKRIPLFDKFNIEEEINNMLSKRVPLPNGGSLVIEQTEALVSIDVNGGHGM 736

Query: 802 FGQETSQEKAILEVNLAAARQIARELRLRDIGGIIVVDFIDMADESNKRLVYEEIKKAVE 861
           FG  +S+EKAIL+VNLAAA+QIARELRLRDIGGIIVVDFIDMAD+SNKRLVYEE+KKAVE
Sbjct: 737 FGHGSSKEKAILDVNLAAAKQIARELRLRDIGGIIVVDFIDMADDSNKRLVYEEVKKAVE 796

Query: 862 RDRSMVKVSELSRHGLMEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQEIC 921
           RDRSMVKVSELSRHGLMEITRKRVRPSVTFMISEPC CC  TGRVEALETSFSKIEQEI 
Sbjct: 797 RDRSMVKVSELSRHGLMEITRKRVRPSVTFMISEPCTCCQGTGRVEALETSFSKIEQEIS 856

Query: 922 RQLATMKQKPDPENPKSWPKFILRVDHHMCDYLTSGKRTRLAILSSSLKVWIILKVARGF 981
           R LA M+QK DPENPKSWP+FILRVDHHMC+YLTSGKRTRLA+LSSSLK WI+LKVARGF
Sbjct: 857 RLLAMMEQKADPENPKSWPRFILRVDHHMCNYLTSGKRTRLAVLSSSLKAWILLKVARGF 916

Query: 982 TRGAFEVKSFTDDKLSRSENQAPISLLQPLEGRSNNSSKKVTLFPVKKWK 996
           TRGAFEV  +TDDK S +++Q  ISLL+  E R+N S KKVTL P+KK K
Sbjct: 917 TRGAFEVIPYTDDKASENQHQVAISLLRSAEARANKSGKKVTLVPIKKLK 956

BLAST of Cp4.1LG15g06810 vs. TrEMBL
Match: A0A061DNB1_THECC (RNAse E/G-like OS=Theobroma cacao GN=TCM_002455 PE=4 SV=1)

HSP 1 Score: 1157.9 bits (2994), Expect = 0.0e+00
Identity = 648/1028 (63.04%), Postives = 761/1028 (74.03%), Query Frame = 1

Query: 9    CASELYHQPRFMAVPEACSWPNHLVLRRRLRLSGPWQLCADK-FLSLSPYICRHMPLEKM 68
            C +EL H P FMA+ E  SWP    L      S     C  + F+ LSP+   H+ L  M
Sbjct: 3    CFTELRH-PTFMAILE--SWPRPCSL-----FSPRTPSCLLRSFMFLSPFTDHHIALGSM 62

Query: 69   -RFRLCTGQNHYVGGSPIMSTQKGV--------CKVVWTIEADLEADQLLYLTGDPIALG 128
             RF LC G ++ +  SPIMS +KG+        C+VVWT+EADL   QLLY++G+ +ALG
Sbjct: 63   FRFTLCAGNHNSLTRSPIMSMKKGLSTVTFEGLCEVVWTVEADLAEGQLLYISGESVALG 122

Query: 129  SWEPNMAIQMSHVDHSNLWKAEVKIARGINFKYNYFIKEESLP-SSVIWRTGPEFSLCLP 188
             WEP  AI MS   H+N+W+AEVKIA G++FKYNYFIK +  P S + WR GP+FSL +P
Sbjct: 123  CWEPETAILMSPTVHANIWRAEVKIAYGVSFKYNYFIKGKMQPLSDITWRPGPQFSLSVP 182

Query: 189  QTAEHNKQIVVRDSWMRFAITRPSVFTWDSWIEEL-----PSKSFPPEDECVFEEECIES 248
               +  ++IVVRDSWMR          W SWIEE      PS S   EDE + +   ++S
Sbjct: 183  PCKKQERRIVVRDSWMRSKTECCPPHVWGSWIEETDIPIKPSVSVQVEDEEMMKH--LKS 242

Query: 249  DSIEPNINLNGTVIYDKLY-SDHEELMDST----SQSSESHRHQPIEEPWLIQLPLFFDA 308
            D  E    LN   + D++  SD   + DS     S +  S R QP+EEPW      FF  
Sbjct: 243  DLNESEPFLNDLTVKDEIEPSDVVAICDSEEGLYSYTLLSERDQPVEEPWFFHSSPFFFT 302

Query: 309  SKNVLELGPDLLKNDVIVKEETTLLETRDHLLEDAANLLP--AAGVDTTLDPISTVILIN 368
              + LE   D+LK +  VK+E T LE  +   +     LP  ++ + +  D +STVILIN
Sbjct: 303  YGDDLE--ADMLKYNDSVKDEITRLEANNQQYQITEKFLPEESSPIISKKDSVSTVILIN 362

Query: 369  SSICTMQRIAVLEEGKLVELLLEPVKSNVQCDSVYLGVVSKLVPHMGGAFVNIGNTRPSL 428
            SSICTMQRIAVLE+GKLVELLLEPVKS+VQCDSVY+GVV+KLVPHMGGAFVNIG++R SL
Sbjct: 363  SSICTMQRIAVLEDGKLVELLLEPVKSHVQCDSVYVGVVTKLVPHMGGAFVNIGSSRHSL 422

Query: 429  MDIKQNREPFIFPPFRQRINKRV---VNGSIQGQLTSQD-----ESILIN--TKTDGVD- 488
            MDIK NR PFIFPPFR+R  KRV   V+G+    L + D     E + I   T+ D  D 
Sbjct: 423  MDIKHNRGPFIFPPFRRRTKKRVKGLVSGAPSQHLATNDIEPPSEDVFIEDATEDDSEDE 482

Query: 489  -------DHEDNEVEDGFDVSEVLRENVNGSVVDDDGDLDADFEDCVDDKVHQDGNASNS 548
                   D+EDN+V++ FDVSEV  E+VNGSVV D  ++DADFED + D  H     S  
Sbjct: 483  EVQFMHNDYEDNDVDEDFDVSEVTNESVNGSVV-DYAEVDADFED-LSDGEHHLVEGSLL 542

Query: 549  YSATANYSHGSQSSLLQDEKDSKQTVTAENKWFQVRKGTKIIVQVVKEGLGTKGPTLTAY 608
             S++   S+GS  S  Q  KD+      ENKW  VRKGTKIIVQVVKEGLGTKGPTLTAY
Sbjct: 543  GSSSLGISNGSSVSHFQYIKDAD-----ENKWDHVRKGTKIIVQVVKEGLGTKGPTLTAY 602

Query: 609  PQLRSRFWILLTRCGRIGISKKISGVERTRLRVIAKTLQPQGFGLTVRTVAAGHSLEELR 668
            P+LRSRFWIL+T C RIG+SKK++GVERTRL+VIAKTLQPQGFGLTVRTVAAGHSLEEL+
Sbjct: 603  PKLRSRFWILVTCCDRIGVSKKVTGVERTRLKVIAKTLQPQGFGLTVRTVAAGHSLEELQ 662

Query: 669  KDLEGLISTWKTITEHAKLAALAADEGVEGAVPVILHRAMGQTLSVVQDYFNEKVKRMVV 728
            KDLEGL+STWK I EHAK AALAADEGVEGA PV+LHRAMGQTLSVVQDYFN+KV +MVV
Sbjct: 663  KDLEGLLSTWKNILEHAKSAALAADEGVEGATPVLLHRAMGQTLSVVQDYFNDKVNKMVV 722

Query: 729  DSPRTYHEVTNYLQEIAPDLCDRVELFKERIPLFDKFNIEEEINSMLSKRVPLANGGSLI 788
            DSPRTYHEVTNYLQ+IAPDLCDRVEL  + IPLF +FN+EEEIN++LSKRVPL NGGSL+
Sbjct: 723  DSPRTYHEVTNYLQDIAPDLCDRVELHDKGIPLFYEFNVEEEINNILSKRVPLPNGGSLV 782

Query: 789  IEQTEALVSIDVNGGHGVFGQETSQEKAILEVNLAAARQIARELRLRDIGGIIVVDFIDM 848
            IEQTEALVSIDVNGGHG+FG  TSQEKA L+VNLAAA+QIARELRLRDIGGIIVVDFIDM
Sbjct: 783  IEQTEALVSIDVNGGHGMFGHGTSQEKATLDVNLAAAKQIARELRLRDIGGIIVVDFIDM 842

Query: 849  ADESNKRLVYEEIKKAVERDRSMVKVSELSRHGLMEITRKRVRPSVTFMISEPCACCHAT 908
             D+SNKRLVYEE+KKAVERDRSMVKVSELS+HGLMEITRKRVRPSVTFMISEPC CCH T
Sbjct: 843  EDDSNKRLVYEEVKKAVERDRSMVKVSELSKHGLMEITRKRVRPSVTFMISEPCTCCHGT 902

Query: 909  GRVEALETSFSKIEQEICRQLATMKQKPDPENPKSWPKFILRVDHHMCDYLTSGKRTRLA 968
            GRVEALETSFSKIEQEICR LA MKQK DPENPKSWP+F+LRVD HMC+YLTSGKRTRLA
Sbjct: 903  GRVEALETSFSKIEQEICRSLAVMKQKADPENPKSWPRFVLRVDQHMCNYLTSGKRTRLA 962

Query: 969  ILSSSLKVWIILKVARGFTRGAFEVKSFTDDKLSRSENQAPISLLQPLEGRSNNSSKKVT 996
            ILSSSLKVWI+LKVARGFTRGAFE+K FTD+K  ++++Q  IS+L+  E  +  S KK+T
Sbjct: 963  ILSSSLKVWILLKVARGFTRGAFELKPFTDEKADKNQHQVAISMLRTAEAGTGKSGKKLT 1011

BLAST of Cp4.1LG15g06810 vs. TrEMBL
Match: B9IAV7_POPTR (Glycoside hydrolase starch-binding domain-containing family protein OS=Populus trichocarpa GN=POPTR_0014s16820g PE=4 SV=2)

HSP 1 Score: 1142.9 bits (2955), Expect = 0.0e+00
Identity = 610/941 (64.82%), Postives = 731/941 (77.68%), Query Frame = 1

Query: 88  QKGVCKVVWTIEADLEADQLLYLTGDPIALGSWEPNMAIQMSHVDHSNLWKAEVKIARGI 147
           Q+G+C++VWT+EADL   QLLY+TGDP+ LG W+P MAI M  + H NLW+A+V +  G+
Sbjct: 72  QEGLCELVWTVEADLAPGQLLYVTGDPVVLGCWDPEMAILMHPISHPNLWEAQVTVPCGV 131

Query: 148 NFKYNYFIKEESLPS-SVIWRTGPEFSLCLPQTAEHNKQIVVRDSWMRFAITRPSVFTWD 207
           NFKYNYF+++++ PS +V WR GPEFSL +P T + +++I+VRDSW +F   R   + W 
Sbjct: 132 NFKYNYFVRDKTWPSCNVTWRPGPEFSLSVPATVKQDRKIMVRDSWTKFNTERSPDYLWG 191

Query: 208 SWIEEL-----PSKSFPPEDECVFEEECIESDSIEPNINLNGTVIYDKLYSDHEELMDST 267
           SWIEE      PS   P  DE V  +  ++ D  EP   LN   + +K  ++ E+ + +T
Sbjct: 192 SWIEERYLPLEPSNCAPTRDEHVIAKH-LQIDFKEPKAFLNDLKVNNKSRTNDEDYLTAT 251

Query: 268 SQSSES---HRHQPIEEPWLIQLPLFFDASKNVLELGPDLLKNDVIVKEETTLLETRDHL 327
                S    R QP+EEPWL+Q P+     K+  +L  D+ KN   V++     +  D  
Sbjct: 252 YDCPNSVFHERDQPLEEPWLLQSPVISVVFKD--KLTQDVSKNSDTVEDGLKKFKVNDQG 311

Query: 328 LEDAANLLPAAGVDTTL--DPISTVILINSSICTMQRIAVLEEGKLVELLLEPVKSNVQC 387
           ++   + L A G +  L  D +STVILI+SSICTMQRIAVLE+ KLVELLLEPVK+ V C
Sbjct: 312 MK-VKDKLSANGSNLNLKDDSVSTVILISSSICTMQRIAVLEDEKLVELLLEPVKNTVLC 371

Query: 388 DSVYLGVVSKLVPHMGGAFVNIGNTRPSLMDIKQNREPFIFPPFRQRINKRVVNGSI--- 447
           DSVY+GVV+KLVPHMGGAFVNIG++RPSLMDIKQNREPFIFPPF QR  K  VNGS+   
Sbjct: 372 DSVYIGVVTKLVPHMGGAFVNIGSSRPSLMDIKQNREPFIFPPFCQRTKKGEVNGSVLKA 431

Query: 448 --------QGQLTSQDESILINTKTDGV----------DDHEDNEVEDGFDVSEVLRENV 507
                   + + TS D  + I+  ++ V          DDHE++EV+D FDVSEV +ENV
Sbjct: 432 FEEHPAAHENEHTSHDVEV-IDDVSEFVFHSDLAPFLHDDHEEHEVDDDFDVSEV-KENV 491

Query: 508 NGSVVDDDGDLDADFEDCVDDKVHQ-DGNASNSYSATANYSHGSQSSLLQDEKDSKQTVT 567
           NGS+VD  G++DADFE  +D + H  +G+       TA+ SH       QD KD+K T+T
Sbjct: 492 NGSIVDY-GEVDADFEQFLDGREHHLEGD-------TASLSH-------QDIKDAKHTLT 551

Query: 568 AENKWFQVRKGTKIIVQVVKEGLGTKGPTLTAYPQLRSRFWILLTRCGRIGISKKISGVE 627
           +ENKW QVRKGTK+IVQVVKEGLGTKGPT+TAYP+LRSRFWIL+TRC RIG+SKK+SGVE
Sbjct: 552 SENKWSQVRKGTKVIVQVVKEGLGTKGPTVTAYPKLRSRFWILITRCDRIGVSKKVSGVE 611

Query: 628 RTRLRVIAKTLQPQGFGLTVRTVAAGHSLEELRKDLEGLISTWKTITEHAKLAALAADEG 687
           RTRL+VIAKTLQP GFGLTVRTVAAGHS EEL+KDLEGL+STWK+I EHAK AALA DEG
Sbjct: 612 RTRLKVIAKTLQPPGFGLTVRTVAAGHSFEELQKDLEGLLSTWKSIMEHAKSAALAEDEG 671

Query: 688 VEGAVPVILHRAMGQTLSVVQDYFNEKVKRMVVDSPRTYHEVTNYLQEIAPDLCDRVELF 747
           VEGA+PV+LHRAMGQTLSVVQDYF+EKV++M+VDSPRTYHEVTNYLQEIAPDLC RVEL+
Sbjct: 672 VEGAIPVVLHRAMGQTLSVVQDYFSEKVRKMMVDSPRTYHEVTNYLQEIAPDLCGRVELY 731

Query: 748 KERIPLFDKFNIEEEINSMLSKRVPLANGGSLIIEQTEALVSIDVNGGHGVFGQETSQEK 807
            +R PLFD+F IEEEIN++LSKRVPL++GGSL+IEQTEALVSIDVNGGH +  Q TSQEK
Sbjct: 732 DKRTPLFDEFKIEEEINNILSKRVPLSSGGSLVIEQTEALVSIDVNGGHVMLRQRTSQEK 791

Query: 808 AILEVNLAAARQIARELRLRDIGGIIVVDFIDMADESNKRLVYEEIKKAVERDRSMVKVS 867
           AIL+VNLAAA++IARELRLRDIGGIIVVDFIDMADESNKRLVYE +K+AVERDRS VKVS
Sbjct: 792 AILDVNLAAAKRIARELRLRDIGGIIVVDFIDMADESNKRLVYEAVKRAVERDRSTVKVS 851

Query: 868 ELSRHGLMEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQEICRQLATMKQK 927
           ELS HGLMEITRKRVRPSVTFMISEPC CCHATGRVEALETSFSKIEQEICR LATM QK
Sbjct: 852 ELSNHGLMEITRKRVRPSVTFMISEPCTCCHATGRVEALETSFSKIEQEICRSLATMDQK 911

Query: 928 PDPENPKSWPKFILRVDHHMCDYLTSGKRTRLAILSSSLKVWIILKVARGFTRGAFEVKS 987
            D ENPK+WP+FILRVDHHMC+YLTSGKRTRLA+LSSSLKVWI+LKVARGFTRGAFEVK 
Sbjct: 912 ADHENPKTWPRFILRVDHHMCNYLTSGKRTRLAVLSSSLKVWILLKVARGFTRGAFEVKQ 971

Query: 988 FTDDKLSRSENQAPISLLQPLEGRSNNSSKKVTLFPVKKWK 996
           FTDDK ++ + Q  IS+L+  E R+  S  KVTL PVKK K
Sbjct: 972 FTDDKTNKDQQQVAISVLRQAEARAKKSGGKVTLVPVKKGK 991

BLAST of Cp4.1LG15g06810 vs. TAIR10
Match: AT2G04270.5 (AT2G04270.5 RNAse E/G-like)

HSP 1 Score: 1029.2 bits (2660), Expect = 1.6e-300
Identity = 585/993 (58.91%), Postives = 718/993 (72.31%), Query Frame = 1

Query: 54   LSPYICRHMPLEK-MRFRLCTGQNHYVGGSPIM-------------STQKGVCKVVWTIE 113
            LS Y+  H+   K  R  LC G +     S I              S  KG+C+VVW +E
Sbjct: 30   LSSYMFSHVERGKTFRLTLCFGVSRLRPRSAIPLRFLLSVFSEQPPSRLKGLCEVVWIVE 89

Query: 114  ADLEADQLLYLTGDPIALGSWEPNMAIQMSHVDHSNLWKAEVKIARGINFKYNYFIKEES 173
            ADL A++ LY+TGDP  LGSWEP+ AI M   ++ N W+A+VKIA G+NF+YNY +K   
Sbjct: 90   ADLAANEHLYVTGDPSTLGSWEPDCAISMYPTENDNEWEAKVKIASGVNFRYNYLLKAGY 149

Query: 174  LPSS-VIWRTGPEFSLCLPQTAEHNKQIVVRDSWMRFAITRPSV--FTWDSWIEE---LP 233
              SS VIWR GP+FSL +P +   +++I++RDSWM  +I+  S   + W SWI++    P
Sbjct: 150  GSSSDVIWRPGPQFSLSVPSSVNQDRKIIIRDSWMSMSISSKSQESYGWGSWIDDAYLFP 209

Query: 234  SKSFPPEDECVFEEECIESDS-IE-PNINLNGTVIYDKLYSDHEELMDSTSQSSE----- 293
            +   P + E    +EC  +DS IE P  +LN   +  + +   +EL   +S++S      
Sbjct: 210  NCVTPAQSE----DECTSADSAIEVPRTHLNDKQVGAESFLC-DELAAFSSENSNLSALF 269

Query: 294  SHRHQPIEEPWLIQLPLFFDASKNV-LELGPDLLKNDVIVKEETTLLETRDHLLEDAANL 353
            S  +QPIEEPWLIQ  +     +N+  +   D+   D    E     + ++H L +   L
Sbjct: 270  SDNYQPIEEPWLIQESITLQHERNMQTDSEQDVESCDD--NENNLNTDEQNHQLTET--L 329

Query: 354  LPAAGVDTTLDPISTVILINSSICTMQRIAVLEEGKLVELLLEPVKSNVQCDSVYLGVVS 413
            LP  G   + + I+T ILINSSICT+QRIAVLE GKLVELLLEPVK+NVQCDSVYLGV++
Sbjct: 330  LPDGGFFQS-ESIATTILINSSICTVQRIAVLEGGKLVELLLEPVKTNVQCDSVYLGVIT 389

Query: 414  KLVPHMGGAFVNIGNTRPSLMDIKQNREPFIFPPFRQRINKRVVNGS------------- 473
            K VPHMGGAFVNIG+ R S MDIK NREPFIFPPF     K+  +GS             
Sbjct: 390  KFVPHMGGAFVNIGSARHSFMDIKSNREPFIFPPFCDGSKKQAADGSPILSMNDIPAPHE 449

Query: 474  IQGQLTSQDESILI----NTKTDGVDDHEDNEVEDGFDVSEVLRENVNGSVVDDDGDLDA 533
            I+      + S L+    N   +   D +D    D + VS+ L   VNG+VV+  G ++ 
Sbjct: 450  IEHASYDFEASSLLDIDSNDPGESFHDDDDEHENDEYHVSDHLAGLVNGTVVNH-GAVEV 509

Query: 534  DFEDCVDDKVHQDGNASNSYSATANYSHGSQSSLLQDEKDSKQTVTAENKWFQVRKGTKI 593
              E+       + G++++S  + A+ +           K SK   + +NKW QVRKGTKI
Sbjct: 510  GSEN--GHIPMERGHSADSLDSNASVA-----------KASKVMSSKDNKWIQVRKGTKI 569

Query: 594  IVQVVKEGLGTKGPTLTAYPQLRSRFWILLTRCGRIGISKKISGVERTRLRVIAKTLQPQ 653
            IVQVVKEGLGTKGPTLTAYP+LRSRFW+LLTRC RIG+SKKISGVERTRL+VIAKTLQPQ
Sbjct: 570  IVQVVKEGLGTKGPTLTAYPKLRSRFWVLLTRCKRIGVSKKISGVERTRLKVIAKTLQPQ 629

Query: 654  GFGLTVRTVAAGHSLEELRKDLEGLISTWKTITEHAKLAALAADEGVEGAVPVILHRAMG 713
            GFGLTVRTVAAGHSLEEL+KDL+GL+ TWK IT+ AK AALAADEGVEGA+P +LHRAMG
Sbjct: 630  GFGLTVRTVAAGHSLEELQKDLDGLLLTWKNITDEAKSAALAADEGVEGAIPALLHRAMG 689

Query: 714  QTLSVVQDYFNEKVKRMVVDSPRTYHEVTNYLQEIAPDLCDRVELFKERIPLFDKFNIEE 773
            QTLSVVQDYFN+KV++MVVDSPRTYHEVT+YLQ++APDLC+RVEL  + IPLFD + IEE
Sbjct: 690  QTLSVVQDYFNDKVEKMVVDSPRTYHEVTHYLQDMAPDLCNRVELHDKGIPLFDLYEIEE 749

Query: 774  EINSMLSKRVPLANGGSLIIEQTEALVSIDVNGGHGVFGQETSQEKAILEVNLAAARQIA 833
            EI  +LSKRVPL+NGGSL+IEQTEALVSIDVNGGHG+FGQ  SQEKAILEVNLAAARQIA
Sbjct: 750  EIEGILSKRVPLSNGGSLVIEQTEALVSIDVNGGHGMFGQGNSQEKAILEVNLAAARQIA 809

Query: 834  RELRLRDIGGIIVVDFIDMADESNKRLVYEEIKKAVERDRSMVKVSELSRHGLMEITRKR 893
            RE+RLRDIGGIIVVDFIDMADESNKRLVYEE+KKAVERDRS+VKVSELSRHGLMEITRKR
Sbjct: 810  REIRLRDIGGIIVVDFIDMADESNKRLVYEEVKKAVERDRSLVKVSELSRHGLMEITRKR 869

Query: 894  VRPSVTFMISEPCACCHATGRVEALETSFSKIEQEICRQLATMKQKPDPENPKSWPKFIL 953
            VRPSVTFMISEPC+CCHATGRVEALET+FSKIEQEICRQLA M+++ D ENPKSWP+FIL
Sbjct: 870  VRPSVTFMISEPCSCCHATGRVEALETTFSKIEQEICRQLAKMEKRGDLENPKSWPRFIL 929

Query: 954  RVDHHMCDYLTSGKRTRLAILSSSLKVWIILKVARGFTRGAFEVKSFTDDK-LSRSENQA 1000
            RVD HM  +LT+GKRTRLAILSSSLKVWI+LKVAR FTRG FEVK F D+K ++  ++Q 
Sbjct: 930  RVDSHMSSFLTTGKRTRLAILSSSLKVWILLKVARHFTRGTFEVKPFMDEKTVNERQHQV 989

BLAST of Cp4.1LG15g06810 vs. NCBI nr
Match: gi|659124205|ref|XP_008462034.1| (PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 1713.7 bits (4437), Expect = 0.0e+00
Identity = 877/1017 (86.23%), Postives = 923/1017 (90.76%), Query Frame = 1

Query: 1    MGSPFLYLCASELYHQPRFMAVPEACSWPNHLVLRRRLRLSGPWQLCADKFLSLSPYICR 60
            MGSPFL  C+ EL+HQPRFM VPEACS  +HLVL RR  LS PW  CA KFLS  PYI  
Sbjct: 1    MGSPFLCPCSFELHHQPRFMGVPEACSSSHHLVLHRRFHLSHPWPPCAHKFLSPPPYIHL 60

Query: 61   HMPLEKMRFRLCTGQNHYVGGSPIMSTQKGVCKVVWTIEADLEADQLLYLTGDPIALGSW 120
            HM L KMRFRLCTGQN+YVGGSP+MST KGVCKVVWT+EADLEADQLLYLTGDPIALGSW
Sbjct: 61   HMTLGKMRFRLCTGQNNYVGGSPVMSTIKGVCKVVWTVEADLEADQLLYLTGDPIALGSW 120

Query: 121  EPNMAIQMSHVDHSNLWKAEVKIARGINFKYNYFIKEESLPSS-VIWRTGPEFSLCLPQT 180
            EPNMAIQMS   H+NLWKAE KI  GINFKYNYFIKEE+LPSS +IWRTGPEFSL LPQT
Sbjct: 121  EPNMAIQMSPTHHANLWKAEAKINCGINFKYNYFIKEEALPSSDIIWRTGPEFSLSLPQT 180

Query: 181  AEHNKQIVVRDSWMRFAITRPSVFTWDSWIEELPSKSFPPEDECVFEEECIESDSIEPNI 240
              H+KQI VRDSWMRF +TRPSVFTWDSWIEELP KS P EDE   EEEC+ESDSIEP +
Sbjct: 181  VNHDKQITVRDSWMRFTVTRPSVFTWDSWIEELPLKSLPAEDEREIEEECLESDSIEPYV 240

Query: 241  NLNGTVIYDKLYSDHEELMDSTSQSSESHRHQPIEEPWLIQLPLFFDASKNVLELGPDLL 300
            NLNGT+IYDKLYSDHEELMDS SQSS+ HRHQPIEEPWL   PLFFD+ KNVLE  PDLL
Sbjct: 241  NLNGTMIYDKLYSDHEELMDSASQSSDFHRHQPIEEPWL---PLFFDSPKNVLE--PDLL 300

Query: 301  KNDVIVKEETTLLETRDHLLEDAANLLPAAGVDTTL-DPISTVILINSSICTMQRIAVLE 360
            KNDVI+KEETT+LETRD LLEDAANLLP +G DT L DPIST+ILINSSICTMQRIAVLE
Sbjct: 301  KNDVIIKEETTVLETRDQLLEDAANLLPTSGADTMLKDPISTIILINSSICTMQRIAVLE 360

Query: 361  EGKLVELLLEPVKSNVQCDSVYLGVVSKLVPHMGGAFVNIGNTRPSLMDIKQNREPFIFP 420
            EGKLVELLLEPVKSNVQCDSVYLGVVSKLVPHMGGAFVNIGN+RPSLMDIKQNREPFIFP
Sbjct: 361  EGKLVELLLEPVKSNVQCDSVYLGVVSKLVPHMGGAFVNIGNSRPSLMDIKQNREPFIFP 420

Query: 421  PFRQRINKRVVNG-SIQGQLTSQDESILINTKTDGV--------------DDHEDNEVED 480
            PF QR+NK+V+NG S+QGQL SQDESIL   KTDGV              DDHE+NEV+D
Sbjct: 421  PFCQRVNKQVINGCSVQGQLASQDESILSIPKTDGVADIEIQNTSMLSLPDDHEENEVDD 480

Query: 481  GFDVSEVLRENVNGSVVDDDGDLDADFEDCVDDKVHQ-DGNASNSYSATANYSHGSQSSL 540
            GFDVS+VLRENVNGS+VDDDGDLDADFEDC+DDK H  +G+AS SY+ATA+YS  SQ S 
Sbjct: 481  GFDVSDVLRENVNGSIVDDDGDLDADFEDCIDDKGHHLEGHASISYTATASYSSDSQLSF 540

Query: 541  LQDEKDSKQTVTAENKWFQVRKGTKIIVQVVKEGLGTKGPTLTAYPQLRSRFWILLTRCG 600
            LQD KDSKQ VT ENKW QVRKGTKIIVQVVKEGLGTK PTLTAYP+LRSRFWIL+TRC 
Sbjct: 541  LQDGKDSKQIVTDENKWLQVRKGTKIIVQVVKEGLGTKSPTLTAYPRLRSRFWILITRCD 600

Query: 601  RIGISKKISGVERTRLRVIAKTLQPQGFGLTVRTVAAGHSLEELRKDLEGLISTWKTITE 660
            RIGISKKISGVERTRLRVIAKTLQPQGFGLTVRTVAAGHSLEEL+KDLEGLISTWKTITE
Sbjct: 601  RIGISKKISGVERTRLRVIAKTLQPQGFGLTVRTVAAGHSLEELQKDLEGLISTWKTITE 660

Query: 661  HAKLAALAADEGVEGAVPVILHRAMGQTLSVVQDYFNEKVKRMVVDSPRTYHEVTNYLQE 720
            HAK AALAADEG+EGAVPVILHRAMGQTLSVVQDYFN+KVKRMVVDSPRTYHEVTNYLQE
Sbjct: 661  HAKSAALAADEGIEGAVPVILHRAMGQTLSVVQDYFNDKVKRMVVDSPRTYHEVTNYLQE 720

Query: 721  IAPDLCDRVELFKERIPLFDKFNIEEEINSMLSKRVPLANGGSLIIEQTEALVSIDVNGG 780
            IAPDLCDRVELF  RIPLFDKFNIEEEINS+LSKRVPLANGGSLIIEQTEALVSIDVNGG
Sbjct: 721  IAPDLCDRVELFHGRIPLFDKFNIEEEINSILSKRVPLANGGSLIIEQTEALVSIDVNGG 780

Query: 781  HGVFGQETSQEKAILEVNLAAARQIARELRLRDIGGIIVVDFIDMADESNKRLVYEEIKK 840
            HGVFGQ +SQEKAILEVNLAAARQIARELRLRDIGGIIVVDFIDM DESNKRLVYEE+KK
Sbjct: 781  HGVFGQASSQEKAILEVNLAAARQIARELRLRDIGGIIVVDFIDMEDESNKRLVYEEVKK 840

Query: 841  AVERDRSMVKVSELSRHGLMEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQ 900
            AVERDRSMVKVSELSRHGLMEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQ
Sbjct: 841  AVERDRSMVKVSELSRHGLMEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQ 900

Query: 901  EICRQLATMKQKPDPENPKSWPKFILRVDHHMCDYLTSGKRTRLAILSSSLKVWIILKVA 960
            EICRQLAT+KQKPDPENPKSWPKFILRVDHHMC+YLTSGKRTRLAILSSSLKVWIILKVA
Sbjct: 901  EICRQLATLKQKPDPENPKSWPKFILRVDHHMCEYLTSGKRTRLAILSSSLKVWIILKVA 960

Query: 961  RGFTRGAFEVKSFTDDKLSRSENQAPISLLQPLEGRSNNSSKKVTLFPVKKWKGTGR 1000
            RGFTRG+FEVKSF DDKLS+SENQAPISLLQPLEGRSNNS KKVTLFPVKKWK TGR
Sbjct: 961  RGFTRGSFEVKSFADDKLSKSENQAPISLLQPLEGRSNNSGKKVTLFPVKKWKSTGR 1012

BLAST of Cp4.1LG15g06810 vs. NCBI nr
Match: gi|449470204|ref|XP_004152808.1| (PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 1634.4 bits (4231), Expect = 0.0e+00
Identity = 846/998 (84.77%), Postives = 889/998 (89.08%), Query Frame = 1

Query: 20   MAVPEACSWPNHLVLRRRLRLSGPWQLCADKFLSLSPYICRHMPLEKMRFRLCTGQNHYV 79
            M VPEACS  +HLVL RR  LS PW  CA KFLS SP I  HM L KM FRLCTGQN+YV
Sbjct: 1    MGVPEACSSSHHLVLHRRFHLSHPWPPCAHKFLSPSPCIHLHMTLGKMMFRLCTGQNNYV 60

Query: 80   GGSPIMSTQKGVCKVVWTIEADLEADQLLYLTGDPIALGSWEPNMAIQMSHVDHSNLWKA 139
            GGSP+MST KGVCKVVWTIEADLE DQLLYLTGDPI LGSWEPNMAIQMS   H+NLWKA
Sbjct: 61   GGSPVMSTIKGVCKVVWTIEADLEVDQLLYLTGDPITLGSWEPNMAIQMSPTHHANLWKA 120

Query: 140  EVKIARGINFKYNYFIKEESLPSS-VIWRTGPEFSLCLPQTAEHNKQIVVRDSWMRFAIT 199
            E KI  GINFKYNYFIK+E+LPSS +IWRTGPEFSL LPQT  H+K I VRDSWMRFA+T
Sbjct: 121  EAKITCGINFKYNYFIKDEALPSSDIIWRTGPEFSLSLPQTVNHDKHITVRDSWMRFAVT 180

Query: 200  RPSVFTWDSWIEELPSKSFPPEDECVFEEECIESDSIEPNINLNGTVIYDKLYSDHEELM 259
             PSVFTWDSWIEELP KS P EDE   EEEC+ESDSIEP +NLNGT+IYDKLYSDHEELM
Sbjct: 181  PPSVFTWDSWIEELPLKSLPAEDERKIEEECLESDSIEPYVNLNGTMIYDKLYSDHEELM 240

Query: 260  DSTSQSSESHRHQPIEEPWLIQLPLFFDASKNVLELGPDLLKNDVIVKEETTLLETRDHL 319
            DSTSQSS+ HRHQP+EEPWL   PL F   KNVLE  PDLLKNDV +KEE T+LETRD L
Sbjct: 241  DSTSQSSDFHRHQPVEEPWL---PLSFYLPKNVLE--PDLLKNDVSIKEEATVLETRDPL 300

Query: 320  LEDAANLLPAAGVDTTL-DPISTVILINSSICTMQRIAVLEEGKLVELLLEPVKSNVQCD 379
            LEDAANLLP +G DT L DPIST+ILINSSICTMQRIAVLEEGKLVELLLEPVKSNVQCD
Sbjct: 301  LEDAANLLPTSGADTMLKDPISTIILINSSICTMQRIAVLEEGKLVELLLEPVKSNVQCD 360

Query: 380  SVYLGVVSKLVPHMGGAFVNIGNTRPSLMDIKQNREPFIFPPFRQRINKRVVNG-SIQGQ 439
            SVYLGVVSKLVPHMGGAFVNIGN+RPSLMDIKQNREPFIFPPF QR+NK+V+N  SIQGQ
Sbjct: 361  SVYLGVVSKLVPHMGGAFVNIGNSRPSLMDIKQNREPFIFPPFCQRVNKQVINDCSIQGQ 420

Query: 440  LTSQDESILINTKTDGV--------------DDHEDNEVEDGFDVSEVLRENVNGSVVDD 499
            LTS  ESIL   K DGV              DDHEDNEVEDGFDV EV RENVNGS+VDD
Sbjct: 421  LTSLGESILSIPKNDGVADIEIQNTSMLSVLDDHEDNEVEDGFDVLEV-RENVNGSIVDD 480

Query: 500  DGDLDADFEDCVDDKVHQ-DGNASNSYSATANYSHGSQSSLLQDEKDSKQTVTAENKWFQ 559
            DGDLDADFEDC+DDK H  +G+AS SYSATA+YS  SQ S LQ  KDSKQ VT ENKW Q
Sbjct: 481  DGDLDADFEDCIDDKAHHLEGHASISYSATASYSSDSQLSFLQYGKDSKQIVTDENKWLQ 540

Query: 560  VRKGTKIIVQVVKEGLGTKGPTLTAYPQLRSRFWILLTRCGRIGISKKISGVERTRLRVI 619
            VRKGTKIIVQVVKEGLGTK P LTAYP+LRSRFWILLTRC RIGISKKISGVERTRLRVI
Sbjct: 541  VRKGTKIIVQVVKEGLGTKSPMLTAYPRLRSRFWILLTRCDRIGISKKISGVERTRLRVI 600

Query: 620  AKTLQPQGFGLTVRTVAAGHSLEELRKDLEGLISTWKTITEHAKLAALAADEGVEGAVPV 679
            AKTLQPQGFGLTVRTVAAGHSLEEL+KDL+GLISTWKTITE+AK AALAADEGVEGAVPV
Sbjct: 601  AKTLQPQGFGLTVRTVAAGHSLEELQKDLDGLISTWKTITENAKSAALAADEGVEGAVPV 660

Query: 680  ILHRAMGQTLSVVQDYFNEKVKRMVVDSPRTYHEVTNYLQEIAPDLCDRVELFKERIPLF 739
            ILHRAMGQTLSVVQDYFN+KVKRMVVDSPRTYHEVTNYLQEIAPDLCDRVELF  RIPLF
Sbjct: 661  ILHRAMGQTLSVVQDYFNDKVKRMVVDSPRTYHEVTNYLQEIAPDLCDRVELFHGRIPLF 720

Query: 740  DKFNIEEEINSMLSKRVPLANGGSLIIEQTEALVSIDVNGGHGVFGQETSQEKAILEVNL 799
            DKFNIEEEINS++SKRVPL NGGSLIIEQTEALVSIDVNGGHGVFGQ +SQE AILEVNL
Sbjct: 721  DKFNIEEEINSIISKRVPLVNGGSLIIEQTEALVSIDVNGGHGVFGQASSQENAILEVNL 780

Query: 800  AAARQIARELRLRDIGGIIVVDFIDMADESNKRLVYEEIKKAVERDRSMVKVSELSRHGL 859
            AAARQIARELRLRDIGGIIVVDFIDM DESNKRLVYEE+KKAVERDRS+VKVSELSRHGL
Sbjct: 781  AAARQIARELRLRDIGGIIVVDFIDMEDESNKRLVYEEVKKAVERDRSIVKVSELSRHGL 840

Query: 860  MEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQEICRQLATMKQKPDPENPK 919
            MEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQEICRQLAT+KQKPDP+NPK
Sbjct: 841  MEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQEICRQLATLKQKPDPDNPK 900

Query: 920  SWPKFILRVDHHMCDYLTSGKRTRLAILSSSLKVWIILKVARGFTRGAFEVKSFTDDKLS 979
            SWPKF+LRVDHHMC+YLTSGKRTRLA+LSSSLKVWIILKVARGFTRG+FEVK F DDKLS
Sbjct: 901  SWPKFVLRVDHHMCEYLTSGKRTRLAVLSSSLKVWIILKVARGFTRGSFEVKYFADDKLS 960

Query: 980  RSENQAPISLLQPLEGRSNNSSKKVTLFPVKKWKGTGR 1000
            RSENQAPISLLQPLEGRSNNS KKVTLFPVKKWKGT R
Sbjct: 961  RSENQAPISLLQPLEGRSNNSGKKVTLFPVKKWKGTRR 992

BLAST of Cp4.1LG15g06810 vs. NCBI nr
Match: gi|778668003|ref|XP_011649023.1| (PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 1356.7 bits (3510), Expect = 0.0e+00
Identity = 712/824 (86.41%), Postives = 747/824 (90.66%), Query Frame = 1

Query: 193  MRFAITRPSVFTWDSWIEELPSKSFPPEDECVFEEECIESDSIEPNINLNGTVIYDKLYS 252
            MRFA+T PSVFTWDSWIEELP KS P EDE   EEEC+ESDSIEP +NLNGT+IYDKLYS
Sbjct: 1    MRFAVTPPSVFTWDSWIEELPLKSLPAEDERKIEEECLESDSIEPYVNLNGTMIYDKLYS 60

Query: 253  DHEELMDSTSQSSESHRHQPIEEPWLIQLPLFFDASKNVLELGPDLLKNDVIVKEETTLL 312
            DHEELMDSTSQSS+ HRHQP+EEPWL   PL F   KNVLE  PDLLKNDV +KEE T+L
Sbjct: 61   DHEELMDSTSQSSDFHRHQPVEEPWL---PLSFYLPKNVLE--PDLLKNDVSIKEEATVL 120

Query: 313  ETRDHLLEDAANLLPAAGVDTTL-DPISTVILINSSICTMQRIAVLEEGKLVELLLEPVK 372
            ETRD LLEDAANLLP +G DT L DPIST+ILINSSICTMQRIAVLEEGKLVELLLEPVK
Sbjct: 121  ETRDPLLEDAANLLPTSGADTMLKDPISTIILINSSICTMQRIAVLEEGKLVELLLEPVK 180

Query: 373  SNVQCDSVYLGVVSKLVPHMGGAFVNIGNTRPSLMDIKQNREPFIFPPFRQRINKRVVNG 432
            SNVQCDSVYLGVVSKLVPHMGGAFVNIGN+RPSLMDIKQNREPFIFPPF QR+NK+V+N 
Sbjct: 181  SNVQCDSVYLGVVSKLVPHMGGAFVNIGNSRPSLMDIKQNREPFIFPPFCQRVNKQVIND 240

Query: 433  -SIQGQLTSQDESILINTKTDGV--------------DDHEDNEVEDGFDVSEVLRENVN 492
             SIQGQLTS  ESIL   K DGV              DDHEDNEVEDGFDV EV RENVN
Sbjct: 241  CSIQGQLTSLGESILSIPKNDGVADIEIQNTSMLSVLDDHEDNEVEDGFDVLEV-RENVN 300

Query: 493  GSVVDDDGDLDADFEDCVDDKVHQ-DGNASNSYSATANYSHGSQSSLLQDEKDSKQTVTA 552
            GS+VDDDGDLDADFEDC+DDK H  +G+AS SYSATA+YS  SQ S LQ  KDSKQ VT 
Sbjct: 301  GSIVDDDGDLDADFEDCIDDKAHHLEGHASISYSATASYSSDSQLSFLQYGKDSKQIVTD 360

Query: 553  ENKWFQVRKGTKIIVQVVKEGLGTKGPTLTAYPQLRSRFWILLTRCGRIGISKKISGVER 612
            ENKW QVRKGTKIIVQVVKEGLGTK P LTAYP+LRSRFWILLTRC RIGISKKISGVER
Sbjct: 361  ENKWLQVRKGTKIIVQVVKEGLGTKSPMLTAYPRLRSRFWILLTRCDRIGISKKISGVER 420

Query: 613  TRLRVIAKTLQPQGFGLTVRTVAAGHSLEELRKDLEGLISTWKTITEHAKLAALAADEGV 672
            TRLRVIAKTLQPQGFGLTVRTVAAGHSLEEL+KDL+GLISTWKTITE+AK AALAADEGV
Sbjct: 421  TRLRVIAKTLQPQGFGLTVRTVAAGHSLEELQKDLDGLISTWKTITENAKSAALAADEGV 480

Query: 673  EGAVPVILHRAMGQTLSVVQDYFNEKVKRMVVDSPRTYHEVTNYLQEIAPDLCDRVELFK 732
            EGAVPVILHRAMGQTLSVVQDYFN+KVKRMVVDSPRTYHEVTNYLQEIAPDLCDRVELF 
Sbjct: 481  EGAVPVILHRAMGQTLSVVQDYFNDKVKRMVVDSPRTYHEVTNYLQEIAPDLCDRVELFH 540

Query: 733  ERIPLFDKFNIEEEINSMLSKRVPLANGGSLIIEQTEALVSIDVNGGHGVFGQETSQEKA 792
             RIPLFDKFNIEEEINS++SKRVPL NGGSLIIEQTEALVSIDVNGGHGVFGQ +SQE A
Sbjct: 541  GRIPLFDKFNIEEEINSIISKRVPLVNGGSLIIEQTEALVSIDVNGGHGVFGQASSQENA 600

Query: 793  ILEVNLAAARQIARELRLRDIGGIIVVDFIDMADESNKRLVYEEIKKAVERDRSMVKVSE 852
            ILEVNLAAARQIARELRLRDIGGIIVVDFIDM DESNKRLVYEE+KKAVERDRS+VKVSE
Sbjct: 601  ILEVNLAAARQIARELRLRDIGGIIVVDFIDMEDESNKRLVYEEVKKAVERDRSIVKVSE 660

Query: 853  LSRHGLMEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQEICRQLATMKQKP 912
            LSRHGLMEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQEICRQLAT+KQKP
Sbjct: 661  LSRHGLMEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQEICRQLATLKQKP 720

Query: 913  DPENPKSWPKFILRVDHHMCDYLTSGKRTRLAILSSSLKVWIILKVARGFTRGAFEVKSF 972
            DP+NPKSWPKF+LRVDHHMC+YLTSGKRTRLA+LSSSLKVWIILKVARGFTRG+FEVK F
Sbjct: 721  DPDNPKSWPKFVLRVDHHMCEYLTSGKRTRLAVLSSSLKVWIILKVARGFTRGSFEVKYF 780

Query: 973  TDDKLSRSENQAPISLLQPLEGRSNNSSKKVTLFPVKKWKGTGR 1000
             DDKLSRSENQAPISLLQPLEGRSNNS KKVTLFPVKKWKGT R
Sbjct: 781  ADDKLSRSENQAPISLLQPLEGRSNNSGKKVTLFPVKKWKGTRR 818

BLAST of Cp4.1LG15g06810 vs. NCBI nr
Match: gi|659124207|ref|XP_008462035.1| (PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 1347.0 bits (3485), Expect = 0.0e+00
Identity = 704/806 (87.34%), Postives = 740/806 (91.81%), Query Frame = 1

Query: 211  ELPSKSFPPEDECVFEEECIESDSIEPNINLNGTVIYDKLYSDHEELMDSTSQSSESHRH 270
            E+ S      DE   EEEC+ESDSIEP +NLNGT+IYDKLYSDHEELMDS SQSS+ HRH
Sbjct: 24   EISSSRGDLTDEREIEEECLESDSIEPYVNLNGTMIYDKLYSDHEELMDSASQSSDFHRH 83

Query: 271  QPIEEPWLIQLPLFFDASKNVLELGPDLLKNDVIVKEETTLLETRDHLLEDAANLLPAAG 330
            QPIEEPWL   PLFFD+ KNVLE  PDLLKNDVI+KEETT+LETRD LLEDAANLLP +G
Sbjct: 84   QPIEEPWL---PLFFDSPKNVLE--PDLLKNDVIIKEETTVLETRDQLLEDAANLLPTSG 143

Query: 331  VDTTL-DPISTVILINSSICTMQRIAVLEEGKLVELLLEPVKSNVQCDSVYLGVVSKLVP 390
             DT L DPIST+ILINSSICTMQRIAVLEEGKLVELLLEPVKSNVQCDSVYLGVVSKLVP
Sbjct: 144  ADTMLKDPISTIILINSSICTMQRIAVLEEGKLVELLLEPVKSNVQCDSVYLGVVSKLVP 203

Query: 391  HMGGAFVNIGNTRPSLMDIKQNREPFIFPPFRQRINKRVVNG-SIQGQLTSQDESILINT 450
            HMGGAFVNIGN+RPSLMDIKQNREPFIFPPF QR+NK+V+NG S+QGQL SQDESIL   
Sbjct: 204  HMGGAFVNIGNSRPSLMDIKQNREPFIFPPFCQRVNKQVINGCSVQGQLASQDESILSIP 263

Query: 451  KTDGV--------------DDHEDNEVEDGFDVSEVLRENVNGSVVDDDGDLDADFEDCV 510
            KTDGV              DDHE+NEV+DGFDVS+VLRENVNGS+VDDDGDLDADFEDC+
Sbjct: 264  KTDGVADIEIQNTSMLSLPDDHEENEVDDGFDVSDVLRENVNGSIVDDDGDLDADFEDCI 323

Query: 511  DDKVHQ-DGNASNSYSATANYSHGSQSSLLQDEKDSKQTVTAENKWFQVRKGTKIIVQVV 570
            DDK H  +G+AS SY+ATA+YS  SQ S LQD KDSKQ VT ENKW QVRKGTKIIVQVV
Sbjct: 324  DDKGHHLEGHASISYTATASYSSDSQLSFLQDGKDSKQIVTDENKWLQVRKGTKIIVQVV 383

Query: 571  KEGLGTKGPTLTAYPQLRSRFWILLTRCGRIGISKKISGVERTRLRVIAKTLQPQGFGLT 630
            KEGLGTK PTLTAYP+LRSRFWIL+TRC RIGISKKISGVERTRLRVIAKTLQPQGFGLT
Sbjct: 384  KEGLGTKSPTLTAYPRLRSRFWILITRCDRIGISKKISGVERTRLRVIAKTLQPQGFGLT 443

Query: 631  VRTVAAGHSLEELRKDLEGLISTWKTITEHAKLAALAADEGVEGAVPVILHRAMGQTLSV 690
            VRTVAAGHSLEEL+KDLEGLISTWKTITEHAK AALAADEG+EGAVPVILHRAMGQTLSV
Sbjct: 444  VRTVAAGHSLEELQKDLEGLISTWKTITEHAKSAALAADEGIEGAVPVILHRAMGQTLSV 503

Query: 691  VQDYFNEKVKRMVVDSPRTYHEVTNYLQEIAPDLCDRVELFKERIPLFDKFNIEEEINSM 750
            VQDYFN+KVKRMVVDSPRTYHEVTNYLQEIAPDLCDRVELF  RIPLFDKFNIEEEINS+
Sbjct: 504  VQDYFNDKVKRMVVDSPRTYHEVTNYLQEIAPDLCDRVELFHGRIPLFDKFNIEEEINSI 563

Query: 751  LSKRVPLANGGSLIIEQTEALVSIDVNGGHGVFGQETSQEKAILEVNLAAARQIARELRL 810
            LSKRVPLANGGSLIIEQTEALVSIDVNGGHGVFGQ +SQEKAILEVNLAAARQIARELRL
Sbjct: 564  LSKRVPLANGGSLIIEQTEALVSIDVNGGHGVFGQASSQEKAILEVNLAAARQIARELRL 623

Query: 811  RDIGGIIVVDFIDMADESNKRLVYEEIKKAVERDRSMVKVSELSRHGLMEITRKRVRPSV 870
            RDIGGIIVVDFIDM DESNKRLVYEE+KKAVERDRSMVKVSELSRHGLMEITRKRVRPSV
Sbjct: 624  RDIGGIIVVDFIDMEDESNKRLVYEEVKKAVERDRSMVKVSELSRHGLMEITRKRVRPSV 683

Query: 871  TFMISEPCACCHATGRVEALETSFSKIEQEICRQLATMKQKPDPENPKSWPKFILRVDHH 930
            TFMISEPCACCHATGRVEALETSFSKIEQEICRQLAT+KQKPDPENPKSWPKFILRVDHH
Sbjct: 684  TFMISEPCACCHATGRVEALETSFSKIEQEICRQLATLKQKPDPENPKSWPKFILRVDHH 743

Query: 931  MCDYLTSGKRTRLAILSSSLKVWIILKVARGFTRGAFEVKSFTDDKLSRSENQAPISLLQ 990
            MC+YLTSGKRTRLAILSSSLKVWIILKVARGFTRG+FEVKSF DDKLS+SENQAPISLLQ
Sbjct: 744  MCEYLTSGKRTRLAILSSSLKVWIILKVARGFTRGSFEVKSFADDKLSKSENQAPISLLQ 803

Query: 991  PLEGRSNNSSKKVTLFPVKKWKGTGR 1000
            PLEGRSNNS KKVTLFPVKKWK TGR
Sbjct: 804  PLEGRSNNSGKKVTLFPVKKWKSTGR 824

BLAST of Cp4.1LG15g06810 vs. NCBI nr
Match: gi|1009164969|ref|XP_015900786.1| (PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X1 [Ziziphus jujuba])

HSP 1 Score: 1228.8 bits (3178), Expect = 0.0e+00
Identity = 677/1043 (64.91%), Postives = 787/1043 (75.46%), Query Frame = 1

Query: 3    SPFLYLCASELYHQPRF-MAVPEACSWPNHLVLRRRLRLSG----PWQLCADKFLSLSPY 62
            +P LY   S    + R+ M VPEA   P H     R + S      W L + +FLS  P+
Sbjct: 2    APLLYCPYSSEVAEARWAMDVPEAHVHPRHHNYPFRQQRSSFSSCSWLLRSVRFLS--PH 61

Query: 63   ICRHMPLEK---MRFRLCTGQNHYVGGSPIMS--------TQKGVCKVVWTIEADLEADQ 122
            I  H+PL       F LC G  +    SP+MS        T KG+CKVVWTIEADL   +
Sbjct: 62   IHHHVPLGNGNLFSFTLCVGIRNSFRKSPVMSLEKDKSITTFKGMCKVVWTIEADLAVGE 121

Query: 123  LLYLTGDPIALGSWEPNMAIQMSHVDHSNLWKAEVKIARGINFKYNYFIKEESLPSSVIW 182
            LLY+TGDPI LG W+P MAI MS  +H+N WKAEVKI  G NFKYNYFIK E+ P  +IW
Sbjct: 122  LLYITGDPIVLGCWDPKMAILMSPAEHANSWKAEVKIDIGANFKYNYFIKRETWPYEIIW 181

Query: 183  RTGPEFSLCLPQTAEHNKQIVVRDSWMRFAITRPSVFTWDSWIEEL-----PSKSFP--P 242
            R GPEFSL +    +  K IVVRDSW+RF    P   +  SWIE+      P  S P   
Sbjct: 182  RPGPEFSLSVFLPVKQRKNIVVRDSWVRFNTDLPPAHSLRSWIEDAYHAIQPFISAPAID 241

Query: 243  EDECVFEEECIESDSIEPNINLNGTVIYDKLYSDH----EELMDSTSQSSESHRHQPIEE 302
            EDE V   +   SDS +   +     + D+LYSDH        +S S    + ++QPIEE
Sbjct: 242  EDERV---KHFRSDSTDTKHSSGDLSMKDELYSDHNIGTSVCEESVSNRILTEKYQPIEE 301

Query: 303  PWLIQLPLFFDASKNVLELGPDLLKNDVIVKEETTLLETRDHLLEDAANLLPAAGVDTTL 362
            PWL+Q PLF  ASKN +EL  D+LKN+  V+++ T LE ++   +  +N++       + 
Sbjct: 302  PWLLQTPLFSTASKNKMEL--DVLKNNETVEDKGTELEDKEK-PQQGSNVI-------SK 361

Query: 363  DPISTVILINSSICTMQRIAVLEEGKLVELLLEPVKSNVQCDSVYLGVVSKLVPHMGGAF 422
            DPIST+ILINSSICTMQRIAVLE+GKLVELLLEPVK+NVQCDSVYLGVV+KLVPHMGGAF
Sbjct: 362  DPISTIILINSSICTMQRIAVLEDGKLVELLLEPVKNNVQCDSVYLGVVTKLVPHMGGAF 421

Query: 423  VNIGNTRPSLMDIKQNREPFIFPPFRQRINKRVVNGSIQGQLTSQ--------------- 482
            VNIG++RPSLMDIK+NREPFIFPPF+++  KR VNG++   L                  
Sbjct: 422  VNIGSSRPSLMDIKRNREPFIFPPFQRQTTKREVNGALSEVLPEHSAALENDHASLGIEV 481

Query: 483  -DESILINTKTDGV----DDHEDNEVEDGFDVSEVLRENVNGSVVDDDGDLDADFEDCVD 542
             DE   I  + D V    D  E++E +D  D++EVLR+N NGS++   G+ +A +ED +D
Sbjct: 482  GDEITEIGLQEDSVQSFHDHDEEHESDDDLDITEVLRDNENGSLL-SYGEAEAHYEDSLD 541

Query: 543  DKVHQDG--NASNSYSATANYSHGSQSSLLQDEKDSKQTVTAENKWFQVRKGTKIIVQVV 602
             + HQ G    S S+ A  N S  SQ    +D K+S+ TVT+ NKW QV+KGTK+IVQVV
Sbjct: 542  GQEHQRGGETISGSFHAAINGSSNSQMPHPRDTKESEHTVTSVNKWAQVQKGTKVIVQVV 601

Query: 603  KEGLGTKGPTLTAYPQLRSRFWILLTRCGRIGISKKISGVERTRLRVIAKTLQPQGFGLT 662
            KEGLGTKGPTLTAYP+LRSRFW+L+TRC RIG+SKKISGVERTRL+VIAKTLQP+GFGLT
Sbjct: 602  KEGLGTKGPTLTAYPKLRSRFWVLITRCDRIGVSKKISGVERTRLKVIAKTLQPEGFGLT 661

Query: 663  VRTVAAGHSLEELRKDLEGLISTWKTITEHAKLAALAADEGVEGAVPVILHRAMGQTLSV 722
            VRTVAAGHSLEEL+KDLEGL+STWK+I EHAK AALAADEGV+GAVPVILHRAMGQTLSV
Sbjct: 662  VRTVAAGHSLEELQKDLEGLLSTWKSIMEHAKSAALAADEGVDGAVPVILHRAMGQTLSV 721

Query: 723  VQDYFNEKVKRMVVDSPRTYHEVTNYLQEIAPDLCDRVELFKERIPLFDKFNIEEEINSM 782
            VQDYFNE V+RMVVDS RTYHEVTNYLQ+IAPDLCDRVEL+ +RIPLFD+FNIEEEINSM
Sbjct: 722  VQDYFNEMVERMVVDSARTYHEVTNYLQDIAPDLCDRVELYNKRIPLFDEFNIEEEINSM 781

Query: 783  LSKRVPLANGGSLIIEQTEALVSIDVNGGHGVFGQETSQEKAILEVNLAAARQIARELRL 842
            LSKRVPLANGGSL+IEQTEALVSIDVNGGHG+FG+ETSQEKAIL+VNLAAA+QIARELRL
Sbjct: 782  LSKRVPLANGGSLVIEQTEALVSIDVNGGHGMFGRETSQEKAILDVNLAAAKQIARELRL 841

Query: 843  RDIGGIIVVDFIDMADESNKRLVYEEIKKAVERDRSMVKVSELSRHGLMEITRKRVRPSV 902
            RDIGGIIVVDFIDMAD+S+KRLVYEE+KKAV+RDRSMVKVSELSRHGLMEITRKRVRPSV
Sbjct: 842  RDIGGIIVVDFIDMADDSHKRLVYEEVKKAVDRDRSMVKVSELSRHGLMEITRKRVRPSV 901

Query: 903  TFMISEPCACCHATGRVEALETSFSKIEQEICRQLATMKQKPDPENPKSWPKFILRVDHH 962
            TFMISEPC CCHATGRVEALETSFSKIEQEI R LATM QK DPENPKSWPKFILRVD +
Sbjct: 902  TFMISEPCPCCHATGRVEALETSFSKIEQEISRLLATMDQKADPENPKSWPKFILRVDRY 961

Query: 963  MCDYLTSGKRTRLAILSSSLKVWIILKVARGFTRGAFEVKSFTDDKLSRSENQAPISLLQ 997
            MCDYLTSGKRTRLAILSSSLKVWI+LKVARGFTRGAFEVK FTDDK + + +Q  ISLL+
Sbjct: 962  MCDYLTSGKRTRLAILSSSLKVWILLKVARGFTRGAFEVKLFTDDKANENRHQVNISLLR 1021

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RNE_ARATH2.9e-29958.91Ribonuclease E/G-like protein, chloroplastic OS=Arabidopsis thaliana GN=RNE PE=1... [more]
RNE_HAEIN5.5e-5635.65Ribonuclease E OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 /... [more]
RNG_HAEIN7.9e-5536.13Ribonuclease G OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 /... [more]
RNG_SHIFL7.4e-5336.02Ribonuclease G OS=Shigella flexneri GN=rng PE=3 SV=2[more]
RNG_ECOLI7.4e-5336.02Ribonuclease G OS=Escherichia coli (strain K12) GN=rng PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0LHN6_CUCSA0.0e+0084.77Uncharacterized protein OS=Cucumis sativus GN=Csa_2G079650 PE=4 SV=1[more]
F6HHQ9_VITVI0.0e+0063.52Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0057g01320 PE=4 SV=... [more]
V4UFK8_9ROSI0.0e+0066.53Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014166mg PE=4 SV=1[more]
A0A061DNB1_THECC0.0e+0063.04RNAse E/G-like OS=Theobroma cacao GN=TCM_002455 PE=4 SV=1[more]
B9IAV7_POPTR0.0e+0064.82Glycoside hydrolase starch-binding domain-containing family protein OS=Populus t... [more]
Match NameE-valueIdentityDescription
AT2G04270.51.6e-30058.91 RNAse E/G-like[more]
Match NameE-valueIdentityDescription
gi|659124205|ref|XP_008462034.1|0.0e+0086.23PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X1 [Cucumis melo... [more]
gi|449470204|ref|XP_004152808.1|0.0e+0084.77PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X1 [Cucumis sati... [more]
gi|778668003|ref|XP_011649023.1|0.0e+0086.41PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X2 [Cucumis sati... [more]
gi|659124207|ref|XP_008462035.1|0.0e+0087.34PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X2 [Cucumis melo... [more]
gi|1009164969|ref|XP_015900786.1|0.0e+0064.91PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X1 [Ziziphus juj... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO:0004540ribonuclease activity
GO:0003723RNA binding
GO:2001070starch binding
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Vocabulary: INTERPRO
TermDefinition
IPR019307RNA-bd_AU-1/RNase_E/G
IPR013784Carb-bd-like_fold
IPR013783Ig-like_fold
IPR012340NA-bd_OB-fold
IPR004659RNase_E/G
IPR002044CBM_fam20
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0090501 RNA phosphodiester bond hydrolysis
biological_process GO:0006396 RNA processing
cellular_component GO:0005575 cellular_component
molecular_function GO:0004540 ribonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:2001070 starch binding
molecular_function GO:0030246 carbohydrate binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g06810.1Cp4.1LG15g06810.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002044Carbohydrate binding module family 20PFAMPF00686CBM_20coord: 93..182
score: 7.6
IPR002044Carbohydrate binding module family 20SMARTSM01065CBM_20_2coord: 93..186
score: 6.
IPR002044Carbohydrate binding module family 20PROFILEPS51166CBM20coord: 86..194
score: 16
IPR004659Ribonuclease E/GTIGRFAMsTIGR00757TIGR00757coord: 352..881
score: 3.0E
IPR012340Nucleic acid-binding, OB-foldGENE3DG3DSA:2.40.50.140coord: 531..573
score: 5.2E-12coord: 372..420
score: 5.2
IPR012340Nucleic acid-binding, OB-foldunknownSSF50249Nucleic acid-binding proteinscoord: 379..418
score: 4.8E-6coord: 529..571
score: 4.
IPR013783Immunoglobulin-like foldGENE3DG3DSA:2.60.40.10coord: 89..193
score: 5.6
IPR013784Carbohydrate-binding-like foldunknownSSF49452Starch-binding domain-likecoord: 88..192
score: 1.05
IPR019307RNA-binding protein AU-1/Ribonuclease E/GPFAMPF10150RNase_E_Gcoord: 570..849
score: 9.4
NoneNo IPR availablePANTHERPTHR30001RIBONUCLEASEcoord: 96..461
score: 0.0coord: 514..995
score:
NoneNo IPR availablePANTHERPTHR30001:SF1RIBONUCLEASE E/G-LIKE PROTEIN, CHLOROPLASTICcoord: 96..461
score: 0.0coord: 514..995
score:

The following gene(s) are paralogous to this gene:

None