Cp4.1LG15g06300 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG15g06300
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Pectinesterase
Location	Cp4.1LG15 : 6995380 .. 6997689 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGACCACCATGAAGCTGTGAAAATCACATCCTCTTGCTTGTTCTGATAACCACATCCTCTTGCTTCTTCTTTTACTTTACACCGTTCTTGTTTGTTCTTGCTCTTGTTTTCTCTTCTTCAACTTAACTTTAAAGATGGCGTTTTTCCAGCTGATTTCATGTTTCTTTTTATGCTTTTTCAACTTTCTGGCCGTTGTTGATTCCACCCATTTTAATGCAACAGTAGCATTAGATGGAACGGGAAACTTCAAAAGCATTACTGATGCAATTGCAGCCGCTCCAAACAACTCCAATACACGATTTTACATTCGTGTATCTTCCGGCATTTACCACGAACATCTTGAAATTGCATCAGCCAAGAAGTTCATTGCTTTGATTGGCGAGAATGAGTTTACAACCATTATCGTCGACAATAGAAGTAATGCCGGTGGATTCAGAACCTCTGAATCCGCAACCATGGGTAATTACTCTTATTCTTTATTTTTATGAAATAATTTGTTTGAGCAAAATAAATCTTACCTCTGATAAAATGGGGTAAGGTGTTAATATTTAGCTAAAAAACTTGAATCCATATGACAATTATTTTCTCCTTTTGAATTAGGCTTTCTTTTGGAGAATCGTATGTAGAATAATATTGTTTGAATCCTTACTAATTTCTTTATTCTTATTTGATGCAGTGGTCAAAGGTAACAACTTTATGGCCCAACATTTGAGTTTCGAGAATTCTGCAGACCATCAAGACGGCCAAGCAGTTGCTGTTCTTGACGATGCCAAATACACGGTTTATTACAAATGCAGATTCCTGAGTTTTCAAGACACCCTATATTCGAAGGGAGAATATCAATTCTTTAAGGGGTGCGACATCTATGGAACGGTGGATTTTATTTTTGGCAATGGACTTGCTATGTTCCAAGACTGTAACGTATATGCTCGGTTACCGAGCAATGACTCTACAGTCACTGCACAGTCCAAGAAACAATGGACCCAAAGTGGCTTCTCCTTTCAGAACTGTACAGTCACAGTTTCTCCGGAGATAGCTTCCTGTAAGGCCTTAGTTAAAATCTATCTTGGTCGGCCATGGAAACCATATTCAACAGTTGTGTTCATGGAGTCATTTTTGGATGACAACGTGCAACCACAGGGATGGATGTTGTGGCCAGGGGTACCAGTAAACAACCTCTTTTATGCCGAGTACAACAATAGAGGTCCTGGTGCTAACACAACACACCGAGTTAATTGGCCAGGTTTTCATGTAATCGATAGACAATTAGCTAAAAGTTGTACGGTAGAAAACTTTATTAATGGGACTTATTGGTTGCCCGAAACAAATGTACCCTATACAAGTGGACTTTATTCTTAATGAAATTGCCTCATCAACATTGATAAATATCCATATGCATGTAAAAGTTTTATTGTAGAGAACTTTATTTTTTTTAATGAGCACATCTCAGGTTTAATGAAAAGGTTAAATAAAAAATATTATTTAATTAAAAAAATATTTAAGACTTACCTTTTACCTTAAGATTCCTATTTGACCTTATGAATTGTTATATACATCCATTCCTAATTAAATGTGCCCGAATTAATTTCCTAATTAAATGTACATGAACTAATTTCCTAATTAAATGTACATGAACTAATTTCCAAAACAAGTTGGGAAATTCATTAGTTTTGCACTATAAATTTCTACTATGTCTAAATAGGATTATTGCCAAAGATGAAGAACACGTCTTCTTCCCTCACATTTCTGGGTGCTTTTACCCTTCTTTTACTATCCATTTTCAACCCTTCCATGTCAGCCAAGGTCGAAGAGACTAGAAGCACCTTTGTACATGATACTTGCAACAAATTTCAAATTGAGCAATTGTATAAGTTGTGCATTCCTGAGATTGATTCAGATTTTCGTGAAGATTTGAAGTCAAATTTGACAGGTATTTTAATTATATTTGTGAATCATAGCATCAGTAATTTCAACGACAACATTGCGTTCCTTCAAAGAGAGATAAAGTCGGGAAAGTTAAATGGTGAAACAAAAGTGATGTATAATGGGTGTTTGGAAGATTTTGAAAGAGGAAATGGTGATTTGCAAGAAACAATGCATATACTACTTACCCAAACGGGGATAGACGCGTATAATTTGCCAACAATCAATATTCCTAACTATGTAAGTGAATGCGTTGATTTTTATGAAGGTGACCCTATACCACCCGAGTGGCAGTCTCGCTACAATACTTCATGGAACTTATTGACTCTTATTGGGGTAACGTCTAATCTCATGAAATGTAATCGTGACATTGCATGTATCCCTTAA

mRNA sequence

TGACCACCATGAAGCTGTGAAAATCACATCCTCTTGCTTGTTCTGATAACCACATCCTCTTGCTTCTTCTTTTACTTTACACCGTTCTTGTTTGTTCTTGCTCTTGTTTTCTCTTCTTCAACTTAACTTTAAAGATGGCGTTTTTCCAGCTGATTTCATGTTTCTTTTTATGCTTTTTCAACTTTCTGGCCGTTGTTGATTCCACCCATTTTAATGCAACAGTAGCATTAGATGGAACGGGAAACTTCAAAAGCATTACTGATGCAATTGCAGCCGCTCCAAACAACTCCAATACACGATTTTACATTCGTGTATCTTCCGGCATTTACCACGAACATCTTGAAATTGCATCAGCCAAGAAGTTCATTGCTTTGATTGGCGAGAATGAGTTTACAACCATTATCGTCGACAATAGAAGTAATGCCGGTGGATTCAGAACCTCTGAATCCGCAACCATGGCCAAGGTCGAAGAGACTAGAAGCACCTTTGTACATGATACTTGCAACAAATTTCAAATTGAGCAATTGTATAAGTTGTGCATTCCTGAGATTGATTCAGATTTTCGTGAAGATTTGAAGTCAAATTTGACAGGTGACCCTATACCACCCGAGTGGCAGTCTCGCTACAATACTTCATGGAACTTATTGACTCTTATTGGGGTAACGTCTAATCTCATGAAATGTAATCGTGACATTGCATGTATCCCTTAA

Coding sequence (CDS)

ATGGCGTTTTTCCAGCTGATTTCATGTTTCTTTTTATGCTTTTTCAACTTTCTGGCCGTTGTTGATTCCACCCATTTTAATGCAACAGTAGCATTAGATGGAACGGGAAACTTCAAAAGCATTACTGATGCAATTGCAGCCGCTCCAAACAACTCCAATACACGATTTTACATTCGTGTATCTTCCGGCATTTACCACGAACATCTTGAAATTGCATCAGCCAAGAAGTTCATTGCTTTGATTGGCGAGAATGAGTTTACAACCATTATCGTCGACAATAGAAGTAATGCCGGTGGATTCAGAACCTCTGAATCCGCAACCATGGCCAAGGTCGAAGAGACTAGAAGCACCTTTGTACATGATACTTGCAACAAATTTCAAATTGAGCAATTGTATAAGTTGTGCATTCCTGAGATTGATTCAGATTTTCGTGAAGATTTGAAGTCAAATTTGACAGGTGACCCTATACCACCCGAGTGGCAGTCTCGCTACAATACTTCATGGAACTTATTGACTCTTATTGGGGTAACGTCTAATCTCATGAAATGTAATCGTGACATTGCATGTATCCCTTAA

Protein sequence

MAFFQLISCFFLCFFNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATMAKVEETRSTFVHDTCNKFQIEQLYKLCIPEIDSDFREDLKSNLTGDPIPPEWQSRYNTSWNLLTLIGVTSNLMKCNRDIACIP

Homology

[Close]

BLAST of Cp4.1LG15g06300 vs. Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 4.9e-14
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1


Query: 27  NATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFIALIGENEF 86
           +ATVA DG+G FK++  A+AAAP NSN R+ I + +G+Y E++E+A  KK I  +G+   
Sbjct: 281 DATVAADGSGTFKTVAAAVAAAPENSNKRYVIHIKAGVYRENVEVAKKKKNIMFMGDGRT 340

Query: 87  TTIIVDNRSNAGGFRTSESATMAKVEE 114
            TII  +R+   G  T  SAT+A V E
Sbjct: 341 RTIITGSRNVVDGSTTFHSATVAAVGE 367

[Close]

BLAST of Cp4.1LG15g06300 vs. Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.9e-13
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 1


Query: 19  AVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFI 78
           A V  T++N +VA+DGTGNF +I DA+ AAPN S TRF I +  G Y E++E+   K  I
Sbjct: 213 APVQETNYNLSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMI 272

Query: 79  ALIGENEFTTIIVDNRSNAGGFRTSESATM 109
             IG+    T+I  NRS   G+ T ++ T+
Sbjct: 273 MFIGDGIGKTVIKANRSRIDGWSTFQTPTV 302

[Close]

BLAST of Cp4.1LG15g06300 vs. Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=3)

HSP 1 Score: 75.1 bits (183), Expect = 9.3e-13
Identity = 38/83 (45.78%), Postives = 53/83 (63.86%), Query Frame = 1


Query: 27  NATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFIALIGENEF 86
           N  VA DGTG FK++ +A+AAAP NSNTR+ I V  G+Y E ++I   KK + L+G+ + 
Sbjct: 246 NVVVAKDGTGKFKTVNEAVAAAPENSNTRYVIYVKKGVYKETIDIGKKKKNLMLVGDGKD 305

Query: 87  TTIIVDNRSNAGGFRTSESATMA 110
            TII  + +   G  T  SAT+A
Sbjct: 306 ATIITGSLNVIDGSTTFRSATVA 328

[Close]

BLAST of Cp4.1LG15g06300 vs. Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.1e-12
Identity = 34/85 (40.00%), Postives = 58/85 (68.24%), Query Frame = 1


Query: 27  NATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFIALIGENEF 86
           N  VA DG+G++K++++A+AAAP +S TR+ IR+ +G+Y E++++   KK I  +G+   
Sbjct: 8   NVVVAADGSGDYKTVSEAVAAAPEDSKTRYVIRIKAGVYRENVDVPKKKKNIMFLGDGRT 67

Query: 87  TTIIVDNRSNAGGFRTSESATMAKV 112
           +TII  +++   G  T  SAT+A V
Sbjct: 68  STIITASKNVQDGSTTFNSATVAAV 92

[Close]

BLAST of Cp4.1LG15g06300 vs. Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.1e-12
Identity = 41/88 (46.59%), Postives = 54/88 (61.36%), Query Frame = 1


Query: 21  VDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFIAL 80
           VD T  N  VA +GTGN+ +I +AI+AAPN+S TRF I +  G Y E++EI   K  I  
Sbjct: 201 VDETKVNLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMF 260

Query: 81  IGENEFTTIIVDNRSNAGGFRTSESATM 109
           IG+    T+I  NRS A G+    SAT+
Sbjct: 261 IGDGIGRTVIKANRSYADGWTAFHSATV 288

[Close]

BLAST of Cp4.1LG15g06300 vs. TrEMBL
Match: A0A0A0LR14_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_1G049450 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.1e-28
Identity = 67/108 (62.04%), Postives = 83/108 (76.85%), Query Frame = 1


Query: 1   MAFFQLISCFFLCFFNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV 60
           M FF  + C   CFFN + ++ S  FN TV+LDG+GNFK I+DAIAAAPNNSNTRFYI V
Sbjct: 1   MLFFFGVPCSLFCFFNLMLLIHSLSFNLTVSLDGSGNFKRISDAIAAAPNNSNTRFYIHV 60

Query: 61  SSGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM 109
           + G YHE L+I   KKFIAL+G++ FTTII+DNRSN  GF+T+ SAT+
Sbjct: 61  APGTYHETLQIPRLKKFIALVGDDPFTTIIIDNRSNGTGFKTNNSATL 108

[Close]

BLAST of Cp4.1LG15g06300 vs. TrEMBL
Match: A0A0A0KNI2_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_5G488760 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.3e-17
Identity = 59/112 (52.68%), Postives = 72/112 (64.29%), Query Frame = 1


Query: 7   ISCFFLCFFNFLAVV------DSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV 66
           IS   + F  +L VV      D   FN TV+LDGTGNF  I DAIAAAPN S TRFYI V
Sbjct: 3   ISTLKMLFIVYLLVVVIVEFSDCFIFNFTVSLDGTGNFVKINDAIAAAPNFSTTRFYIHV 62

Query: 67  SSGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATMAKVE 113
             G Y E +E+   K  IALIG++  TTIIV+NRSN  G  T+ SAT++K++
Sbjct: 63  KPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLSKLQ 114

[Close]

BLAST of Cp4.1LG15g06300 vs. TrEMBL
Match: A0A0A0L1M3_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_4G260430 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.1e-15
Identity = 53/103 (51.46%), Postives = 65/103 (63.11%), Query Frame = 1


Query: 6   LISCFFLCFFNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIY 65
           +I   +L     +   D   FN+TV+LDGT NF  I DAIAAAPN S TRFYI V  G Y
Sbjct: 1   MIFVLYLLVVVIVEFSDCFSFNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTY 60

Query: 66  HEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM 109
            E +E+   K  IALIG++  TTIIV+NRSN  G  T+ SAT+
Sbjct: 61  QEIIEVPYEKTCIALIGDDSSTTIIVNNRSNGTGSSTASSATL 103

[Close]

BLAST of Cp4.1LG15g06300 vs. TrEMBL
Match: A0A0B0N2I7_GOSAR (Pectinesterase OS=Gossypium arboreum GN=F383_32118 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.1e-15
Identity = 46/95 (48.42%), Postives = 62/95 (65.26%), Query Frame = 1


Query: 19  AVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFI 78
           A V+ T F+  VA DGTGNF +I DA+AAAPNNSNTRF I + +G Y E++E+   KK +
Sbjct: 240 ASVNETEFDLIVAKDGTGNFTTINDAVAAAPNNSNTRFVIYIKAGSYFENVEVVKKKKML 299

Query: 79  ALIGENEFTTIIVDNRSNAGGFRTSESATMAKVEE 114
             +G+    T++  NR+   GF T  SAT+A V E
Sbjct: 300 MFVGDGIGKTVVKANRNVVDGFTTFRSATVAVVGE 334

[Close]

BLAST of Cp4.1LG15g06300 vs. TrEMBL
Match: A0A0D2SCA1_GOSRA (Pectinesterase OS=Gossypium raimondii GN=B456_007G127000 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.0e-14
Identity = 45/95 (47.37%), Postives = 62/95 (65.26%), Query Frame = 1


Query: 19  AVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFI 78
           A V+ T F+  VA DGTGNF +I DA+AAAPNNSNTRF I + +G Y E++E+   KK +
Sbjct: 240 ASVNETEFDLIVAKDGTGNFTTINDAVAAAPNNSNTRFVIYIKAGSYLENVEVVKKKKML 299

Query: 79  ALIGENEFTTIIVDNRSNAGGFRTSESATMAKVEE 114
             +G+    T++  +R+   GF T  SAT+A V E
Sbjct: 300 MFVGDGIGKTVVKASRNVVDGFTTFRSATVAVVGE 334

[Close]

BLAST of Cp4.1LG15g06300 vs. TAIR10
Match: AT3G14310.1 (AT3G14310.1 pectin methylesterase 3)

HSP 1 Score: 79.3 bits (194), Expect = 2.8e-15
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1


Query: 27  NATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFIALIGENEF 86
           +ATVA DG+G FK++  A+AAAP NSN R+ I + +G+Y E++E+A  KK I  +G+   
Sbjct: 281 DATVAADGSGTFKTVAAAVAAAPENSNKRYVIHIKAGVYRENVEVAKKKKNIMFMGDGRT 340

Query: 87  TTIIVDNRSNAGGFRTSESATMAKVEE 114
            TII  +R+   G  T  SAT+A V E
Sbjct: 341 RTIITGSRNVVDGSTTFHSATVAAVGE 367

[Close]

BLAST of Cp4.1LG15g06300 vs. TAIR10
Match: AT4G02300.1 (AT4G02300.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 1


Query: 19  AVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFI 78
           A V  T++N +VA+DGTGNF +I DA+ AAPN S TRF I +  G Y E++E+   K  I
Sbjct: 213 APVQETNYNLSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMI 272

Query: 79  ALIGENEFTTIIVDNRSNAGGFRTSESATM 109
             IG+    T+I  NRS   G+ T ++ T+
Sbjct: 273 MFIGDGIGKTVIKANRSRIDGWSTFQTPTV 302

[Close]

BLAST of Cp4.1LG15g06300 vs. TAIR10
Match: AT1G11580.1 (AT1G11580.1 methylesterase PCR A)

HSP 1 Score: 75.1 bits (183), Expect = 5.2e-14
Identity = 38/83 (45.78%), Postives = 53/83 (63.86%), Query Frame = 1


Query: 27  NATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFIALIGENEF 86
           N  VA DGTG FK++ +A+AAAP NSNTR+ I V  G+Y E ++I   KK + L+G+ + 
Sbjct: 246 NVVVAKDGTGKFKTVNEAVAAAPENSNTRYVIYVKKGVYKETIDIGKKKKNLMLVGDGKD 305

Query: 87  TTIIVDNRSNAGGFRTSESATMA 110
            TII  + +   G  T  SAT+A
Sbjct: 306 ATIITGSLNVIDGSTTFRSATVA 328

[Close]

BLAST of Cp4.1LG15g06300 vs. TAIR10
Match: AT4G02320.1 (AT4G02320.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13
Identity = 41/88 (46.59%), Postives = 54/88 (61.36%), Query Frame = 1


Query: 21  VDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFIAL 80
           VD T  N  VA +GTGN+ +I +AI+AAPN+S TRF I +  G Y E++EI   K  I  
Sbjct: 201 VDETKVNLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMF 260

Query: 81  IGENEFTTIIVDNRSNAGGFRTSESATM 109
           IG+    T+I  NRS A G+    SAT+
Sbjct: 261 IGDGIGRTVIKANRSYADGWTAFHSATV 288

[Close]

BLAST of Cp4.1LG15g06300 vs. TAIR10
Match: AT1G02810.1 (AT1G02810.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 72.4 bits (176), Expect = 3.4e-13
Identity = 39/84 (46.43%), Postives = 56/84 (66.67%), Query Frame = 1


Query: 29  TVALDGTGNFKSITDAIAAAPNNSNTR---FYIRVSSGIYHEHLEIASAKKFIALIGENE 88
           TV+ DGTGNF +IT A+AAAPNN++     F I V++GIY E++ IA  K+++ +IG+  
Sbjct: 266 TVSQDGTGNFTNITAAVAAAPNNTDGSAGFFLIYVTAGIYEEYISIAKNKRYMMMIGDGI 325

Query: 89  FTTIIVDNRSNAGGFRTSESATMA 110
             T++  NRS   G+ T  SAT A
Sbjct: 326 NQTVVTGNRSVVDGWTTFNSATFA 349

[Close]

BLAST of Cp4.1LG15g06300 vs. NCBI nr
Match: gi|778657958|ref|XP_004152582.2| (PREDICTED: pectinesterase 2-like [Cucumis sativus])

HSP 1 Score: 134.8 bits (338), Expect = 1.6e-28
Identity = 67/108 (62.04%), Postives = 83/108 (76.85%), Query Frame = 1


Query: 1   MAFFQLISCFFLCFFNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV 60
           M FF  + C   CFFN + ++ S  FN TV+LDG+GNFK I+DAIAAAPNNSNTRFYI V
Sbjct: 1   MLFFFGVPCSLFCFFNLMLLIHSLSFNLTVSLDGSGNFKRISDAIAAAPNNSNTRFYIHV 60

Query: 61  SSGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATM 109
           + G YHE L+I   KKFIAL+G++ FTTII+DNRSN  GF+T+ SAT+
Sbjct: 61  APGTYHETLQIPRLKKFIALVGDDPFTTIIIDNRSNGTGFKTNNSATL 108

[Close]

BLAST of Cp4.1LG15g06300 vs. NCBI nr
Match: gi|778708428|ref|XP_011656190.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 41 [Cucumis sativus])

HSP 1 Score: 96.7 bits (239), Expect = 4.8e-17
Identity = 48/72 (66.67%), Postives = 58/72 (80.56%), Query Frame = 1


Query: 37  NFKSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSN 96
           +FK+ITDAIA+ PNN NTRFYI V+ G YHE L+I   K FIALIG+N  TTIIVD+RSN
Sbjct: 10  HFKTITDAIASVPNNLNTRFYIHVTPGTYHECLQIPPTKTFIALIGDNALTTIIVDDRSN 69

Query: 97  AGGFRTSESATM 109
           A GF+T +SAT+
Sbjct: 70  ARGFKTIDSATL 81

[Close]

BLAST of Cp4.1LG15g06300 vs. NCBI nr
Match: gi|700196023|gb|KGN51200.1| (hypothetical protein Csa_5G488760 [Cucumis sativus])

HSP 1 Score: 96.3 bits (238), Expect = 6.2e-17
Identity = 59/112 (52.68%), Postives = 72/112 (64.29%), Query Frame = 1


Query: 7   ISCFFLCFFNFLAVV------DSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRV 66
           IS   + F  +L VV      D   FN TV+LDGTGNF  I DAIAAAPN S TRFYI V
Sbjct: 3   ISTLKMLFIVYLLVVVIVEFSDCFIFNFTVSLDGTGNFVKINDAIAAAPNFSTTRFYIHV 62

Query: 67  SSGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGGFRTSESATMAKVE 113
             G Y E +E+   K  IALIG++  TTIIV+NRSN  G  T+ SAT++K++
Sbjct: 63  KPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLSKLQ 114

[Close]

BLAST of Cp4.1LG15g06300 vs. NCBI nr
Match: gi|659068777|ref|XP_008446175.1| (PREDICTED: pectinesterase 2-like [Cucumis melo])

HSP 1 Score: 95.9 bits (237), Expect = 8.1e-17
Identity = 48/70 (68.57%), Postives = 58/70 (82.86%), Query Frame = 1


Query: 39  KSITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAG 98
           ++I  AIAAAP+NSNTRFYIRV+ G YHE L+I   K FIALIG+N  TTIIVD+RSNA 
Sbjct: 2   ETIAAAIAAAPDNSNTRFYIRVTPGTYHERLQIPPTKTFIALIGDNALTTIIVDDRSNAR 61

Query: 99  GFRTSESATM 109
           GF+TS+SAT+
Sbjct: 62  GFKTSDSATL 71

[Close]

BLAST of Cp4.1LG15g06300 vs. NCBI nr
Match: gi|659068775|ref|XP_008446163.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis melo])

HSP 1 Score: 95.5 bits (236), Expect = 1.1e-16
Identity = 48/69 (69.57%), Postives = 57/69 (82.61%), Query Frame = 1


Query: 40  SITDAIAAAPNNSNTRFYIRVSSGIYHEHLEIASAKKFIALIGENEFTTIIVDNRSNAGG 99
           +I  AIAAAP+NSNTRFYIRV+ G YHE L+I   K FIALIG+N  TTIIVD+RSNA G
Sbjct: 13  TIAAAIAAAPDNSNTRFYIRVTPGTYHERLQIPPTKTFIALIGDNALTTIIVDDRSNARG 72

Query: 100 FRTSESATM 109
           F+TS+SAT+
Sbjct: 73  FKTSDSATL 81

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g06300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PME3_ARATH	4.9e-14	45.98	Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 S...	[more]
PME39_ARATH	1.9e-13	44.44	Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=P...	[more]
PME18_ARATH	9.3e-13	45.78	Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1...	[more]
PME_DAUCA	2.1e-12	40.00	Pectinesterase OS=Daucus carota PE=1 SV=1	[more]
PME40_ARATH	2.1e-12	46.59	Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=P...	[more]

BLAST of Cp4.1LG15g06300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR14_CUCSA	1.1e-28	62.04	Pectinesterase OS=Cucumis sativus GN=Csa_1G049450 PE=4 SV=1	[more]
A0A0A0KNI2_CUCSA	4.3e-17	52.68	Pectinesterase OS=Cucumis sativus GN=Csa_5G488760 PE=4 SV=1	[more]
A0A0A0L1M3_CUCSA	3.1e-15	51.46	Pectinesterase OS=Cucumis sativus GN=Csa_4G260430 PE=4 SV=1	[more]
A0A0B0N2I7_GOSAR	3.1e-15	48.42	Pectinesterase OS=Gossypium arboreum GN=F383_32118 PE=4 SV=1	[more]
A0A0D2SCA1_GOSRA	2.0e-14	47.37	Pectinesterase OS=Gossypium raimondii GN=B456_007G127000 PE=4 SV=1	[more]

BLAST of Cp4.1LG15g06300 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G14310.1	2.8e-15	45.98	pectin methylesterase 3	[more]
AT4G02300.1	1.1e-14	44.44	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT1G11580.1	5.2e-14	45.78	methylesterase PCR A	[more]
AT4G02320.1	1.2e-13	46.59	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT1G02810.1	3.4e-13	46.43	Plant invertase/pectin methylesterase inhibitor superfamily	[more]

BLAST of Cp4.1LG15g06300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778657958\|ref\|XP_004152582.2\|	1.6e-28	62.04	PREDICTED: pectinesterase 2-like [Cucumis sativus]	[more]
gi\|778708428\|ref\|XP_011656190.1\|	4.8e-17	66.67	PREDICTED: probable pectinesterase/pectinesterase inhibitor 41 [Cucumis sativus]	[more]
gi\|700196023\|gb\|KGN51200.1\|	6.2e-17	52.68	hypothetical protein Csa_5G488760 [Cucumis sativus]	[more]
gi\|659068777\|ref\|XP_008446175.1\|	8.1e-17	68.57	PREDICTED: pectinesterase 2-like [Cucumis melo]	[more]
gi\|659068775\|ref\|XP_008446163.1\|	1.1e-16	69.57	PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0042545	cell wall modification

Vocabulary: **Molecular Function**
Term	Definition
GO:0030599	pectinesterase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005618	cell wall

Vocabulary: **INTERPRO**
Term	Definition
IPR012334	Pectin_lyas_fold
IPR011050	Pectin_lyase_fold/virulence
IPR000070	Pectinesterase_cat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
cellular_component	GO:0005618	cell wall
molecular_function	GO:0030599	pectinesterase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g06300.1	Cp4.1LG15g06300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 27..112 score: 1.6
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 26..109 score: 2.9
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 26..110 score: 1.0
None	No IPR available	PANTHER	PTHR31707	FAMILY NOT NAMED	coord: 27..109 score: 4.3

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG15g06300	Cucurbita pepo (Zucchini)	cpecpeB280
Cp4.1LG15g06300	Cucurbita pepo (Zucchini)	cpecpeB255
Cp4.1LG15g06300	Cucurbita pepo (Zucchini)	cpecpeB267
Cp4.1LG15g06300	Cucumber (Gy14) v1	cgycpeB0206
Cp4.1LG15g06300	Cucurbita maxima (Rimu)	cmacpeB118
Cp4.1LG15g06300	Cucurbita maxima (Rimu)	cmacpeB522
Cp4.1LG15g06300	Cucurbita maxima (Rimu)	cmacpeB560
Cp4.1LG15g06300	Cucurbita maxima (Rimu)	cmacpeB613
Cp4.1LG15g06300	Cucurbita moschata (Rifu)	cmocpeB093
Cp4.1LG15g06300	Cucurbita moschata (Rifu)	cmocpeB481
Cp4.1LG15g06300	Cucurbita moschata (Rifu)	cmocpeB513
Cp4.1LG15g06300	Cucurbita moschata (Rifu)	cmocpeB562
Cp4.1LG15g06300	Wild cucumber (PI 183967)	cpecpiB259
Cp4.1LG15g06300	Cucumber (Chinese Long) v2	cpecuB257
Cp4.1LG15g06300	Bottle gourd (USVL1VR-Ls)	cpelsiB199
Cp4.1LG15g06300	Watermelon (Charleston Gray)	cpewcgB233
Cp4.1LG15g06300	Watermelon (Charleston Gray)	cpewcgB235
Cp4.1LG15g06300	Watermelon (97103) v1	cpewmB268
Cp4.1LG15g06300	Melon (DHL92) v3.5.1	cpemeB224
Cp4.1LG15g06300	Cucumber (Gy14) v2	cgybcpeB910
Cp4.1LG15g06300	Melon (DHL92) v3.6.1	cpemedB262
Cp4.1LG15g06300	Silver-seed gourd	carcpeB0484
Cp4.1LG15g06300	Silver-seed gourd	carcpeB1189
Cp4.1LG15g06300	Silver-seed gourd	carcpeB1459
Cp4.1LG15g06300	Cucumber (Chinese Long) v3	cpecucB0310
Cp4.1LG15g06300	Cucumber (Chinese Long) v3	cpecucB0322
Cp4.1LG15g06300	Wax gourd	cpewgoB0326