Cp4.1LG15g06290 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG15g06290
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Pectinesterase
Location	Cp4.1LG15 : 6972720 .. 6973091 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCTTTCTCCTATGTTGCATGTTTCTTTGTCTGCTTCATCAACTTTTTGGCATGTGTTGATTCCGTCCGTTTTAATGCAATTGTAGCATTAGACGGTTCGGGACACTACAAAAGAATTAGTGATGCAATAGCAGCTGCTCCAGACAACTCAAAAACGCGATTTTACATTCATGTAACTCCCGGAATTTACCGGGAACATATTCAAATTCCATCTACCAAAAAGTTTATTGCTTTGATCGGTGATAATGCATTCACAACCATTATCGTCGACAATAGAAGTAATGGCACTGGATTCTCGACCTCTGACTCAGCAACCATGGGTAATTACTCTTCTCCTATATTTCCGAAAAAACAAGTTTGGCTCTAA

mRNA sequence

ATGGCATCTTTCTCCTATGTTGCATGTTTCTTTGTCTGCTTCATCAACTTTTTGGCATGTGTTGATTCCGTCCGTTTTAATGCAATTGTAGCATTAGACGGTTCGGGACACTACAAAAGAATTAGTGATGCAATAGCAGCTGCTCCAGACAACTCAAAAACGCGATTTTACATTCATGTAACTCCCGGAATTTACCGGGAACATATTCAAATTCCATCTACCAAAAAGTTTATTGCTTTGATCGGTGATAATGCATTCACAACCATTATCGTCGACAATAGAAGTAATGGCACTGGATTCTCGACCTCTGACTCAGCAACCATGGGTAATTACTCTTCTCCTATATTTCCGAAAAAACAAGTTTGGCTCTAA

Coding sequence (CDS)

ATGGCATCTTTCTCCTATGTTGCATGTTTCTTTGTCTGCTTCATCAACTTTTTGGCATGTGTTGATTCCGTCCGTTTTAATGCAATTGTAGCATTAGACGGTTCGGGACACTACAAAAGAATTAGTGATGCAATAGCAGCTGCTCCAGACAACTCAAAAACGCGATTTTACATTCATGTAACTCCCGGAATTTACCGGGAACATATTCAAATTCCATCTACCAAAAAGTTTATTGCTTTGATCGGTGATAATGCATTCACAACCATTATCGTCGACAATAGAAGTAATGGCACTGGATTCTCGACCTCTGACTCAGCAACCATGGGTAATTACTCTTCTCCTATATTTCCGAAAAAACAAGTTTGGCTCTAA

Protein sequence

MASFSYVACFFVCFINFLACVDSVRFNAIVALDGSGHYKRISDAIAAAPDNSKTRFYIHVTPGIYREHIQIPSTKKFIALIGDNAFTTIIVDNRSNGTGFSTSDSATMGNYSSPIFPKKQVWL

Homology

[Close]

BLAST of Cp4.1LG15g06290 vs. Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.2e-15
Identity = 38/82 (46.34%), Postives = 58/82 (70.73%), Query Frame = 1


Query: 27  NAIVALDGSGHYKRISDAIAAAPDNSKTRFYIHVTPGIYREHIQIPSTKKFIALIGDNAF 86
           N +VA DGSG YK +S+A+AAAP++SKTR+ I +  G+YRE++ +P  KK I  +GD   
Sbjct: 8   NVVVAADGSGDYKTVSEAVAAAPEDSKTRYVIRIKAGVYRENVDVPKKKKNIMFLGDGRT 67

Query: 87  TTIIVDNRSNGTGFSTSDSATM 109
           +TII  +++   G +T +SAT+
Sbjct: 68  STIITASKNVQDGSTTFNSATV 89

[Close]

BLAST of Cp4.1LG15g06290 vs. Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.1e-14
Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 1


Query: 21  VDSVRFNAIVALDGSGHYKRISDAIAAAPDNSKTRFYIHVTPGIYREHIQIPSTKKFIAL 80
           VD  + N +VA +G+G+Y  I +AI+AAP++S+TRF I++  G Y E+I+IP  K  I  
Sbjct: 201 VDETKVNLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMF 260

Query: 81  IGDNAFTTIIVDNRSNGTGFSTSDSATMGNYSSPIFPK 119
           IGD    T+I  NRS   G++   SAT+G   S    K
Sbjct: 261 IGDGIGRTVIKANRSYADGWTAFHSATVGVRGSGFIAK 298

[Close]

BLAST of Cp4.1LG15g06290 vs. Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.1e-14
Identity = 37/82 (45.12%), Postives = 57/82 (69.51%), Query Frame = 1


Query: 27  NAIVALDGSGHYKRISDAIAAAPDNSKTRFYIHVTPGIYREHIQIPSTKKFIALIGDNAF 86
           NA+VA DG+G Y+ +++A+AAAPD SKTR+ I+V  GIY+E++++ S K  + ++GD   
Sbjct: 237 NAVVAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGIYKENVEVSSRKMKLMIVGDGMH 296

Query: 87  TTIIVDNRSNGTGFSTSDSATM 109
            TII  N +   G +T  SAT+
Sbjct: 297 ATIITGNLNVVDGSTTFHSATL 318

[Close]

BLAST of Cp4.1LG15g06290 vs. Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 1.6e-13
Identity = 36/82 (43.90%), Postives = 57/82 (69.51%), Query Frame = 1


Query: 27  NAIVALDGSGHYKRISDAIAAAPDNSKTRFYIHVTPGIYREHIQIPSTKKFIALIGDNAF 86
           NA+VA DG+G Y+ +++A+AAAPD SKTR+ I+V  G Y+E++++ S K  + +IGD  +
Sbjct: 237 NAVVAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGTYKENVEVSSRKMNLMIIGDGMY 296

Query: 87  TTIIVDNRSNGTGFSTSDSATM 109
            TII  + +   G +T  SAT+
Sbjct: 297 ATIITGSLNVVDGSTTFHSATL 318

[Close]

BLAST of Cp4.1LG15g06290 vs. Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 3.5e-13
Identity = 37/85 (43.53%), Postives = 56/85 (65.88%), Query Frame = 1


Query: 24  VRFNAIVALDGSGHYKRISDAIAAAPDNSKTRFYIHVTPGIYREHIQIPSTKKFIALIGD 83
           V+ +A VA DGSG +K ++ A+AAAP+NS  R+ IH+  G+YRE++++   KK I  +GD
Sbjct: 278 VKADATVAADGSGTFKTVAAAVAAAPENSNKRYVIHIKAGVYRENVEVAKKKKNIMFMGD 337

Query: 84  NAFTTIIVDNRSNGTGFSTSDSATM 109
               TII  +R+   G +T  SAT+
Sbjct: 338 GRTRTIITGSRNVVDGSTTFHSATV 362

[Close]

BLAST of Cp4.1LG15g06290 vs. TrEMBL
Match: A0A0A0LR14_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_1G049450 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.3e-30
Identity = 69/108 (63.89%), Postives = 83/108 (76.85%), Query Frame = 1


Query: 1   MASFSYVACFFVCFINFLACVDSVRFNAIVALDGSGHYKRISDAIAAAPDNSKTRFYIHV 60
           M  F  V C   CF N +  + S+ FN  V+LDGSG++KRISDAIAAAP+NS TRFYIHV
Sbjct: 1   MLFFFGVPCSLFCFFNLMLLIHSLSFNLTVSLDGSGNFKRISDAIAAAPNNSNTRFYIHV 60

Query: 61  TPGIYREHIQIPSTKKFIALIGDNAFTTIIVDNRSNGTGFSTSDSATM 109
            PG Y E +QIP  KKFIAL+GD+ FTTII+DNRSNGTGF T++SAT+
Sbjct: 61  APGTYHETLQIPRLKKFIALVGDDPFTTIIIDNRSNGTGFKTNNSATL 108

[Close]

BLAST of Cp4.1LG15g06290 vs. TrEMBL
Match: A0A0A0L1M3_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_4G260430 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.7e-20
Identity = 53/87 (60.92%), Postives = 69/87 (79.31%), Query Frame = 1


Query: 22  DSVRFNAIVALDGSGHYKRISDAIAAAPDNSKTRFYIHVTPGIYREHIQIPSTKKFIALI 81
           D   FN+ V+LDG+ ++ +I+DAIAAAP+ S TRFYIHV PG Y+E I++P  K  IALI
Sbjct: 17  DCFSFNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALI 76

Query: 82  GDNAFTTIIVDNRSNGTGFSTSDSATM 109
           GD++ TTIIV+NRSNGTG ST+ SAT+
Sbjct: 77  GDDSSTTIIVNNRSNGTGSSTASSATL 103

[Close]

BLAST of Cp4.1LG15g06290 vs. TrEMBL
Match: A0A0A0KNI2_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_5G488760 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 6.0e-20
Identity = 58/109 (53.21%), Postives = 78/109 (71.56%), Query Frame = 1


Query: 3   SFSYVACFFVCFINFLACV---DSVRFNAIVALDGSGHYKRISDAIAAAPDNSKTRFYIH 62
           + S +   F+ ++  +  V   D   FN  V+LDG+G++ +I+DAIAAAP+ S TRFYIH
Sbjct: 2   TISTLKMLFIVYLLVVVIVEFSDCFIFNFTVSLDGTGNFVKINDAIAAAPNFSTTRFYIH 61

Query: 63  VTPGIYREHIQIPSTKKFIALIGDNAFTTIIVDNRSNGTGFSTSDSATM 109
           V PG Y+E I++P  K  IALIGD+A TTIIV+NRSNGTG ST+ SAT+
Sbjct: 62  VKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATL 110

[Close]

BLAST of Cp4.1LG15g06290 vs. TrEMBL
Match: W9QFB9_9ROSA (Pectinesterase OS=Morus notabilis GN=L484_012492 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.1e-16
Identity = 46/98 (46.94%), Postives = 67/98 (68.37%), Query Frame = 1


Query: 23  SVRFNAIVALDGSGHYKRISDAIAAAPDNSKTRFYIHVTPGIYREHIQIPSTKKFIALIG 82
           ++ FN IV  D SG++  +SDA+ AAP NSKTR+ I + PG Y+E ++I S   +I+LIG
Sbjct: 32  TIPFNVIVQKDNSGNFTTVSDAVKAAPKNSKTRYMIRIKPGRYKERVEIESDLTYISLIG 91

Query: 83  DNAFTTIIVDNRSNGTGFSTSDSATMGN---YSSPIFP 118
           D+  TTII  +RSNG+GF T+++ T+ +    SSP  P
Sbjct: 92  DDVTTTIITFDRSNGSGFKTNETGTLTDSLFLSSPSSP 129

[Close]

BLAST of Cp4.1LG15g06290 vs. TrEMBL
Match: B9RR19_RICCO (Pectinesterase OS=Ricinus communis GN=RCOM_0708330 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.2e-15
Identity = 43/96 (44.79%), Postives = 63/96 (65.62%), Query Frame = 1


Query: 27  NAIVALDGSGHYKRISDAIAAAPDNSKTRFYIHVTPGIYREHIQIPSTKKFIALIGDNAF 86
           N +VA DGSG+Y+ +S+A+AAAP  S TR+ I +  G+YRE++ IPS+K  +  +GD + 
Sbjct: 273 NVVVAADGSGNYRTVSEAVAAAPSRSSTRYVIRIKAGVYRENVDIPSSKTNLMFVGDGST 332

Query: 87  TTIIVDNRSNGTGFSTSDSATMGNYSSPIFPKKQVW 123
           TTII  +RS   G +T +SAT+G      +  KQ W
Sbjct: 333 TTIITGSRSVVGGSTTFNSATVGVLGKRHYLSKQCW 368

[Close]

BLAST of Cp4.1LG15g06290 vs. TAIR10
Match: AT4G02320.1 (AT4G02320.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 79.0 bits (193), Expect = 2.3e-15
Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 1


Query: 21  VDSVRFNAIVALDGSGHYKRISDAIAAAPDNSKTRFYIHVTPGIYREHIQIPSTKKFIAL 80
           VD  + N +VA +G+G+Y  I +AI+AAP++S+TRF I++  G Y E+I+IP  K  I  
Sbjct: 201 VDETKVNLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMF 260

Query: 81  IGDNAFTTIIVDNRSNGTGFSTSDSATMGNYSSPIFPK 119
           IGD    T+I  NRS   G++   SAT+G   S    K
Sbjct: 261 IGDGIGRTVIKANRSYADGWTAFHSATVGVRGSGFIAK 298

[Close]

BLAST of Cp4.1LG15g06290 vs. TAIR10
Match: AT3G14310.1 (AT3G14310.1 pectin methylesterase 3)

HSP 1 Score: 75.9 bits (185), Expect = 2.0e-14
Identity = 37/85 (43.53%), Postives = 56/85 (65.88%), Query Frame = 1


Query: 24  VRFNAIVALDGSGHYKRISDAIAAAPDNSKTRFYIHVTPGIYREHIQIPSTKKFIALIGD 83
           V+ +A VA DGSG +K ++ A+AAAP+NS  R+ IH+  G+YRE++++   KK I  +GD
Sbjct: 278 VKADATVAADGSGTFKTVAAAVAAAPENSNKRYVIHIKAGVYRENVEVAKKKKNIMFMGD 337

Query: 84  NAFTTIIVDNRSNGTGFSTSDSATM 109
               TII  +R+   G +T  SAT+
Sbjct: 338 GRTRTIITGSRNVVDGSTTFHSATV 362

[Close]

BLAST of Cp4.1LG15g06290 vs. TAIR10
Match: AT4G02300.1 (AT4G02300.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 75.5 bits (184), Expect = 2.6e-14
Identity = 38/91 (41.76%), Postives = 57/91 (62.64%), Query Frame = 1


Query: 19  ACVDSVRFNAIVALDGSGHYKRISDAIAAAPDNSKTRFYIHVTPGIYREHIQIPSTKKFI 78
           A V    +N  VA+DG+G++  I+DA+ AAP+ S+TRF I++  G Y E++++P  K  I
Sbjct: 213 APVQETNYNLSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMI 272

Query: 79  ALIGDNAFTTIIVDNRSNGTGFSTSDSATMG 110
             IGD    T+I  NRS   G+ST  + T+G
Sbjct: 273 MFIGDGIGKTVIKANRSRIDGWSTFQTPTVG 303

[Close]

BLAST of Cp4.1LG15g06290 vs. TAIR10
Match: AT1G11580.1 (AT1G11580.1 methylesterase PCR A)

HSP 1 Score: 72.8 bits (177), Expect = 1.7e-13
Identity = 37/85 (43.53%), Postives = 55/85 (64.71%), Query Frame = 1


Query: 24  VRFNAIVALDGSGHYKRISDAIAAAPDNSKTRFYIHVTPGIYREHIQIPSTKKFIALIGD 83
           V  N +VA DG+G +K +++A+AAAP+NS TR+ I+V  G+Y+E I I   KK + L+GD
Sbjct: 243 VTANVVVAKDGTGKFKTVNEAVAAAPENSNTRYVIYVKKGVYKETIDIGKKKKNLMLVGD 302

Query: 84  NAFTTIIVDNRSNGTGFSTSDSATM 109
               TII  + +   G +T  SAT+
Sbjct: 303 GKDATIITGSLNVIDGSTTFRSATV 327

[Close]

BLAST of Cp4.1LG15g06290 vs. TAIR10
Match: AT3G43270.1 (AT3G43270.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 72.8 bits (177), Expect = 1.7e-13
Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 1


Query: 27  NAIVALDGSGHYKRISDAIAAAPDNSKTRFYIHVTPGIYREHIQIPSTKKFIALIGDNAF 86
           +A+VA DG+G++  ISDA+ AAPD S  R+ IHV  G+Y E+++I   K  I ++GD   
Sbjct: 214 DAVVAADGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYVENVEIKKKKWNIMMVGDGID 273

Query: 87  TTIIVDNRSNGTGFSTSDSAT 108
            T+I  NRS   G++T  SAT
Sbjct: 274 ATVITGNRSFIDGWTTFRSAT 294

[Close]

BLAST of Cp4.1LG15g06290 vs. NCBI nr
Match: gi|778657958|ref|XP_004152582.2| (PREDICTED: pectinesterase 2-like [Cucumis sativus])

HSP 1 Score: 140.6 bits (353), Expect = 1.9e-30
Identity = 69/108 (63.89%), Postives = 83/108 (76.85%), Query Frame = 1


Query: 1   MASFSYVACFFVCFINFLACVDSVRFNAIVALDGSGHYKRISDAIAAAPDNSKTRFYIHV 60
           M  F  V C   CF N +  + S+ FN  V+LDGSG++KRISDAIAAAP+NS TRFYIHV
Sbjct: 1   MLFFFGVPCSLFCFFNLMLLIHSLSFNLTVSLDGSGNFKRISDAIAAAPNNSNTRFYIHV 60

Query: 61  TPGIYREHIQIPSTKKFIALIGDNAFTTIIVDNRSNGTGFSTSDSATM 109
            PG Y E +QIP  KKFIAL+GD+ FTTII+DNRSNGTGF T++SAT+
Sbjct: 61  APGTYHETLQIPRLKKFIALVGDDPFTTIIIDNRSNGTGFKTNNSATL 108

[Close]

BLAST of Cp4.1LG15g06290 vs. NCBI nr
Match: gi|659131731|ref|XP_008465826.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis melo])

HSP 1 Score: 108.2 bits (269), Expect = 1.0e-20
Identity = 52/82 (63.41%), Postives = 69/82 (84.15%), Query Frame = 1


Query: 30  VALDGSGHYKRISDAIAAAPDNSKTRFYIHVTPGIYREHIQIPSTKKFIALIGDNAFTTI 89
           ++LDG+G++ +++DAIAAAP+ S TRFYIHV PG Y+E I++PS K FIALIGD++ TTI
Sbjct: 19  LSLDGTGNFVKVNDAIAAAPNFSMTRFYIHVKPGTYQEIIEVPSEKTFIALIGDDSSTTI 78

Query: 90  IVDNRSNGTGFSTSDSATMGNY 112
           IV+NRSNGTG ST+ SAT+  Y
Sbjct: 79  IVNNRSNGTGSSTASSATLTVY 100

[Close]

BLAST of Cp4.1LG15g06290 vs. NCBI nr
Match: gi|778708428|ref|XP_011656190.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 41 [Cucumis sativus])

HSP 1 Score: 107.8 bits (268), Expect = 1.3e-20
Identity = 54/77 (70.13%), Postives = 61/77 (79.22%), Query Frame = 1


Query: 33  DGS-GHYKRISDAIAAAPDNSKTRFYIHVTPGIYREHIQIPSTKKFIALIGDNAFTTIIV 92
           DGS  H+K I+DAIA+ P+N  TRFYIHVTPG Y E +QIP TK FIALIGDNA TTIIV
Sbjct: 5   DGSIDHFKTITDAIASVPNNLNTRFYIHVTPGTYHECLQIPPTKTFIALIGDNALTTIIV 64

Query: 93  DNRSNGTGFSTSDSATM 109
           D+RSN  GF T DSAT+
Sbjct: 65  DDRSNARGFKTIDSATL 81

[Close]

BLAST of Cp4.1LG15g06290 vs. NCBI nr
Match: gi|700198848|gb|KGN54006.1| (hypothetical protein Csa_4G260430 [Cucumis sativus])

HSP 1 Score: 106.3 bits (264), Expect = 3.9e-20
Identity = 53/87 (60.92%), Postives = 69/87 (79.31%), Query Frame = 1


Query: 22  DSVRFNAIVALDGSGHYKRISDAIAAAPDNSKTRFYIHVTPGIYREHIQIPSTKKFIALI 81
           D   FN+ V+LDG+ ++ +I+DAIAAAP+ S TRFYIHV PG Y+E I++P  K  IALI
Sbjct: 17  DCFSFNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALI 76

Query: 82  GDNAFTTIIVDNRSNGTGFSTSDSATM 109
           GD++ TTIIV+NRSNGTG ST+ SAT+
Sbjct: 77  GDDSSTTIIVNNRSNGTGSSTASSATL 103

[Close]

BLAST of Cp4.1LG15g06290 vs. NCBI nr
Match: gi|778697621|ref|XP_011654361.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis sativus])

HSP 1 Score: 106.3 bits (264), Expect = 3.9e-20
Identity = 53/87 (60.92%), Postives = 69/87 (79.31%), Query Frame = 1


Query: 22  DSVRFNAIVALDGSGHYKRISDAIAAAPDNSKTRFYIHVTPGIYREHIQIPSTKKFIALI 81
           D   FN+ V+LDG+ ++ +I+DAIAAAP+ S TRFYIHV PG Y+E I++P  K  IALI
Sbjct: 24  DCFSFNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALI 83

Query: 82  GDNAFTTIIVDNRSNGTGFSTSDSATM 109
           GD++ TTIIV+NRSNGTG ST+ SAT+
Sbjct: 84  GDDSSTTIIVNNRSNGTGSSTASSATL 110

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g06290 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PME_DAUCA	2.2e-15	46.34	Pectinesterase OS=Daucus carota PE=1 SV=1	[more]
PME40_ARATH	4.1e-14	42.86	Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=P...	[more]
PME22_SOLLC	4.1e-14	45.12	Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1	[more]
PME21_SOLLC	1.6e-13	43.90	Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2	[more]
PME3_ARATH	3.5e-13	43.53	Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 S...	[more]

BLAST of Cp4.1LG15g06290 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR14_CUCSA	1.3e-30	63.89	Pectinesterase OS=Cucumis sativus GN=Csa_1G049450 PE=4 SV=1	[more]
A0A0A0L1M3_CUCSA	2.7e-20	60.92	Pectinesterase OS=Cucumis sativus GN=Csa_4G260430 PE=4 SV=1	[more]
A0A0A0KNI2_CUCSA	6.0e-20	53.21	Pectinesterase OS=Cucumis sativus GN=Csa_5G488760 PE=4 SV=1	[more]
W9QFB9_9ROSA	3.1e-16	46.94	Pectinesterase OS=Morus notabilis GN=L484_012492 PE=4 SV=1	[more]
B9RR19_RICCO	1.2e-15	44.79	Pectinesterase OS=Ricinus communis GN=RCOM_0708330 PE=4 SV=1	[more]

BLAST of Cp4.1LG15g06290 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G02320.1	2.3e-15	42.86	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT3G14310.1	2.0e-14	43.53	pectin methylesterase 3	[more]
AT4G02300.1	2.6e-14	41.76	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT1G11580.1	1.7e-13	43.53	methylesterase PCR A	[more]
AT3G43270.1	1.7e-13	45.68	Plant invertase/pectin methylesterase inhibitor superfamily	[more]

BLAST of Cp4.1LG15g06290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778657958\|ref\|XP_004152582.2\|	1.9e-30	63.89	PREDICTED: pectinesterase 2-like [Cucumis sativus]	[more]
gi\|659131731\|ref\|XP_008465826.1\|	1.0e-20	63.41	PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis melo]	[more]
gi\|778708428\|ref\|XP_011656190.1\|	1.3e-20	70.13	PREDICTED: probable pectinesterase/pectinesterase inhibitor 41 [Cucumis sativus]	[more]
gi\|700198848\|gb\|KGN54006.1\|	3.9e-20	60.92	hypothetical protein Csa_4G260430 [Cucumis sativus]	[more]
gi\|778697621\|ref\|XP_011654361.1\|	3.9e-20	60.92	PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0042545	cell wall modification

Vocabulary: **Molecular Function**
Term	Definition
GO:0030599	pectinesterase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005618	cell wall

Vocabulary: **INTERPRO**
Term	Definition
IPR012334	Pectin_lyas_fold
IPR011050	Pectin_lyase_fold/virulence
IPR000070	Pectinesterase_cat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
cellular_component	GO:0005618	cell wall
molecular_function	GO:0030599	pectinesterase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g06290.1	Cp4.1LG15g06290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 27..111 score: 5.6
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 26..114 score: 5.83
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 25..109 score: 1.3
None	No IPR available	PANTHER	PTHR31707	FAMILY NOT NAMED	coord: 21..109 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG15g06290	Melon (DHL92) v3.6.1	cpemedB262
Cp4.1LG15g06290	Silver-seed gourd	carcpeB0484
Cp4.1LG15g06290	Silver-seed gourd	carcpeB1189
Cp4.1LG15g06290	Silver-seed gourd	carcpeB1459
Cp4.1LG15g06290	Cucumber (Chinese Long) v3	cpecucB0310
Cp4.1LG15g06290	Cucumber (Chinese Long) v3	cpecucB0322
Cp4.1LG15g06290	Wax gourd	cpewgoB0326
Cp4.1LG15g06290	Cucurbita pepo (Zucchini)	cpecpeB280
Cp4.1LG15g06290	Cucurbita pepo (Zucchini)	cpecpeB255
Cp4.1LG15g06290	Cucurbita pepo (Zucchini)	cpecpeB267
Cp4.1LG15g06290	Cucumber (Gy14) v1	cgycpeB0206
Cp4.1LG15g06290	Cucurbita maxima (Rimu)	cmacpeB118
Cp4.1LG15g06290	Cucurbita maxima (Rimu)	cmacpeB522
Cp4.1LG15g06290	Cucurbita maxima (Rimu)	cmacpeB560
Cp4.1LG15g06290	Cucurbita maxima (Rimu)	cmacpeB613
Cp4.1LG15g06290	Cucurbita moschata (Rifu)	cmocpeB093
Cp4.1LG15g06290	Cucurbita moschata (Rifu)	cmocpeB481
Cp4.1LG15g06290	Cucurbita moschata (Rifu)	cmocpeB513
Cp4.1LG15g06290	Cucurbita moschata (Rifu)	cmocpeB562
Cp4.1LG15g06290	Wild cucumber (PI 183967)	cpecpiB259
Cp4.1LG15g06290	Cucumber (Chinese Long) v2	cpecuB257
Cp4.1LG15g06290	Bottle gourd (USVL1VR-Ls)	cpelsiB199
Cp4.1LG15g06290	Watermelon (Charleston Gray)	cpewcgB233
Cp4.1LG15g06290	Watermelon (Charleston Gray)	cpewcgB235
Cp4.1LG15g06290	Watermelon (97103) v1	cpewmB268
Cp4.1LG15g06290	Melon (DHL92) v3.5.1	cpemeB224
Cp4.1LG15g06290	Cucumber (Gy14) v2	cgybcpeB910