Cp4.1LG15g03700 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG15g03700
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Description2-nitropropane dioxygenase, putative
LocationCp4.1LG15 : 4830402 .. 4831433 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAGTAAATAATAATTCAAACAAAAAAACAAAATAAAATTAAAAAGGAAAAATTGCACACGTCTCTATTACGGCGTCGTTTAGTACAACTCGACGGATTAAAGCGAGTGTGCGGCGTATTTGCTTACGTGTTGAACCCGGCAGCTCTCACGTAACCTTCAAAGCCGCCTCTCCCATGGCTGCCACTGCCACTTCCTTCCGGTGTTTTAAAATTGGCTCTTCTTCCAATCAATCCATCATTGCCCATCCAAGAGACAGAATCAGATGGATTCTGGAGGGATTCTCGGTTTCCAATACGGCATAGTTCAGGCTCCGCTTGGACCTGATATCTCCGGTCCTGAGCTTGTTGCTGCGGTCGCCAATGCCGGCGGACTCGGTCTTCTCAGATCCCCCGATTGGGTANTTTATTTTTATTTTTATTTTTATTTTTCATACCCCTTAATTTTGAAATTTAATTATAATTAAATAATATATTTATGGAAAAAAAAAACTAAAATTTATCCCATTATTTCAATTTTAACCTTAAAATTTTAATTCTATCAAACTATATTTTAAATTTAGATAATTGTTGTAATTTTAATTATAAAATTAAAAAATTGATGTAATATTATCGTCTAATAATTTTTCATTTCAACCAGACTGACCATTAAATAAATATTAACGTTATAATCTCTAATATTTATCGGTTGGTTATTTCTCTAGAATGAATTCTACACTTAAAGAGTGCTCGAATTATTTATTCTCGAGCACGTTTGACTTGTTCAGTCGGTCTTGCTTGTTGATCTTATATGTTGGATCAATCTTATACGTTCGATTGACCTTTAGCTTGTTGAGCTTGTAGATGTTGGATCGATCTGCCTTTGTTGTGTTTCGTATATTTTTCATTTGGGATTTTACACGGAGAGATTTTTTCAATTAGGTTCGGGTCACCATTCGAAGTAGTTTTTTTTTTCTTCGTACCATCCACTTTCACCTCCGTCGTGTTTAATGTTGCTTTACTTTAGTCATCTATAGCATACGTGCTTTGA

mRNA sequence

ATGGAAGATACAACTCGACGGATTAAAGCGAGTGTGCGGCGTATTTGCTTACGTGTTGAACCCGGCAGCTCTCACGTAACCTTCAAAGCCGCCTCTCCCATGGCTGCCACTGCCACTTCCTTCCGGTGTTTTAAAATTGGCTCTTCTTCCAATCAATCCATCATTGCCCATCCAAGAGACAGAATCAGATGGATTCTGGAGGGATTCTCGGCTCCGCTTGGACCTGATATCTCCGGTCCTGAGCTTGTTGCTGCGGTCGCCAATGCCGGCGGACTCGGTCTTCTCAGATCCCCCGATTGGTCATCTATAGCATACGTGCTTTGA

Coding sequence (CDS)

ATGGAAGATACAACTCGACGGATTAAAGCGAGTGTGCGGCGTATTTGCTTACGTGTTGAACCCGGCAGCTCTCACGTAACCTTCAAAGCCGCCTCTCCCATGGCTGCCACTGCCACTTCCTTCCGGTGTTTTAAAATTGGCTCTTCTTCCAATCAATCCATCATTGCCCATCCAAGAGACAGAATCAGATGGATTCTGGAGGGATTCTCGGCTCCGCTTGGACCTGATATCTCCGGTCCTGAGCTTGTTGCTGCGGTCGCCAATGCCGGCGGACTCGGTCTTCTCAGATCCCCCGATTGGTCATCTATAGCATACGTGCTTTGA

Protein sequence

MEDTTRRIKASVRRICLRVEPGSSHVTFKAASPMAATATSFRCFKIGSSSNQSIIAHPRDRIRWILEGFSAPLGPDISGPELVAAVANAGGLGLLRSPDWSSIAYVL
Homology
[Close]
BLAST of Cp4.1LG15g03700 vs. TrEMBL
Match: A0A0A0K422_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G064010 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.5e-14
Identity = 56/111 (50.45%), Postives = 65/111 (58.56%), Query Frame = 1 

Query: 12  VRRICLRVEPGSSHVTFKAASPMAATATSFRCF--KIGSSSNQSIIAHP------RDRIR 71
           +RR CLRVE GSSHV FKAAS        F C+   +   SN  + + P      + +I+
Sbjct: 1   MRRNCLRVESGSSHVIFKAASH------GFHCYFPSLPIYSNSLLFSLPTHYCPLKTQIQ 60

Query: 72  WILEGF--------SAPLGPDISGPELVAAVANAGGLGLLRSPDWSSIAYV 107
               G          APLGPDISGPELVAAVANAGGLGLLR+PDW S  YV
Sbjct: 61  MGFGGLLGFQYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWESPDYV 105

[Close]
BLAST of Cp4.1LG15g03700 vs. TrEMBL
Match: A0A022PW68_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a009533mg PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-08
Identity = 31/36 (86.11%), Postives = 33/36 (91.67%), Query Frame = 1 

Query: 71  APLGPDISGPELVAAVANAGGLGLLRSPDWSSIAYV 107
           APLGPDISGPELVAAVANAGGLG LRSPDW++  YV
Sbjct: 16  APLGPDISGPELVAAVANAGGLGFLRSPDWAAPDYV 51

[Close]
BLAST of Cp4.1LG15g03700 vs. TrEMBL
Match: W9SAP4_9ROSA (Putative nitronate monooxygenase OS=Morus notabilis GN=L484_010808 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-08
Identity = 31/36 (86.11%), Postives = 33/36 (91.67%), Query Frame = 1 

Query: 71  APLGPDISGPELVAAVANAGGLGLLRSPDWSSIAYV 107
           APLGPDISGPELVAAVANAGGLGLLR+PDW S  Y+
Sbjct: 16  APLGPDISGPELVAAVANAGGLGLLRAPDWESPDYL 51

[Close]
BLAST of Cp4.1LG15g03700 vs. TrEMBL
Match: B9IJE3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s07870g PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-08
Identity = 31/36 (86.11%), Postives = 33/36 (91.67%), Query Frame = 1 

Query: 71  APLGPDISGPELVAAVANAGGLGLLRSPDWSSIAYV 107
           APLGPDISGPELVAAVANAGGLGLLR+PDW S  Y+
Sbjct: 16  APLGPDISGPELVAAVANAGGLGLLRAPDWESPDYL 51

[Close]
BLAST of Cp4.1LG15g03700 vs. TrEMBL
Match: A0A166GMA6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_001777 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-08
Identity = 31/36 (86.11%), Postives = 33/36 (91.67%), Query Frame = 1 

Query: 71  APLGPDISGPELVAAVANAGGLGLLRSPDWSSIAYV 107
           APLGPDISGP+LVAAVANAGGLGLLR+PDW S  YV
Sbjct: 16  APLGPDISGPQLVAAVANAGGLGLLRAPDWESPDYV 51

[Close]
BLAST of Cp4.1LG15g03700 vs. TAIR10
Match: AT5G64250.2 (AT5G64250.2 Aldolase-type TIM barrel family protein)

HSP 1 Score: 63.2 bits (152), Expect = 1.2e-10
Identity = 29/36 (80.56%), Postives = 31/36 (86.11%), Query Frame = 1 

Query: 71  APLGPDISGPELVAAVANAGGLGLLRSPDWSSIAYV 107
           APLGPDISGPELVAAVANAGG+GLLR PDW    Y+
Sbjct: 14  APLGPDISGPELVAAVANAGGIGLLRCPDWECPDYL 49

[Close]
BLAST of Cp4.1LG15g03700 vs. NCBI nr
Match: gi|778724449|ref|XP_011658807.1| (PREDICTED: nitronate monooxygenase isoform X1 [Cucumis sativus])

HSP 1 Score: 87.0 bits (214), Expect = 2.1e-14
Identity = 56/111 (50.45%), Postives = 65/111 (58.56%), Query Frame = 1 

Query: 12  VRRICLRVEPGSSHVTFKAASPMAATATSFRCF--KIGSSSNQSIIAHP------RDRIR 71
           +RR CLRVE GSSHV FKAAS        F C+   +   SN  + + P      + +I+
Sbjct: 1   MRRNCLRVESGSSHVIFKAASH------GFHCYFPSLPIYSNSLLFSLPTHYCPLKTQIQ 60

Query: 72  WILEGF--------SAPLGPDISGPELVAAVANAGGLGLLRSPDWSSIAYV 107
               G          APLGPDISGPELVAAVANAGGLGLLR+PDW S  YV
Sbjct: 61  MGFGGLLGFQYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWESPDYV 105

[Close]
BLAST of Cp4.1LG15g03700 vs. NCBI nr
Match: gi|1012250541|ref|XP_015943467.1| (PREDICTED: nitronate monooxygenase [Arachis duranensis])

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-08
Identity = 32/36 (88.89%), Postives = 33/36 (91.67%), Query Frame = 1 

Query: 71  APLGPDISGPELVAAVANAGGLGLLRSPDWSSIAYV 107
           APLGPDISGPELVAAVANAGGLGLLR+PDW S  YV
Sbjct: 16  APLGPDISGPELVAAVANAGGLGLLRAPDWESPDYV 51

[Close]
BLAST of Cp4.1LG15g03700 vs. NCBI nr
Match: gi|659110334|ref|XP_008455173.1| (PREDICTED: nitronate monooxygenase isoform X1 [Cucumis melo])

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-08
Identity = 32/36 (88.89%), Postives = 33/36 (91.67%), Query Frame = 1 

Query: 71  APLGPDISGPELVAAVANAGGLGLLRSPDWSSIAYV 107
           APLGPDISGPELVAAVANAGGLGLLR+PDW S  YV
Sbjct: 16  APLGPDISGPELVAAVANAGGLGLLRAPDWESPDYV 51

[Close]
BLAST of Cp4.1LG15g03700 vs. NCBI nr
Match: gi|703160043|ref|XP_010112403.1| (putative nitronate monooxygenase [Morus notabilis])

HSP 1 Score: 66.6 bits (161), Expect = 3.0e-08
Identity = 31/36 (86.11%), Postives = 33/36 (91.67%), Query Frame = 1 

Query: 71  APLGPDISGPELVAAVANAGGLGLLRSPDWSSIAYV 107
           APLGPDISGPELVAAVANAGGLGLLR+PDW S  Y+
Sbjct: 16  APLGPDISGPELVAAVANAGGLGLLRAPDWESPDYL 51

[Close]
BLAST of Cp4.1LG15g03700 vs. NCBI nr
Match: gi|1021051343|gb|KZN09121.1| (hypothetical protein DCAR_001777 [Daucus carota subsp. sativus])

HSP 1 Score: 66.6 bits (161), Expect = 3.0e-08
Identity = 31/36 (86.11%), Postives = 33/36 (91.67%), Query Frame = 1 

Query: 71  APLGPDISGPELVAAVANAGGLGLLRSPDWSSIAYV 107
           APLGPDISGP+LVAAVANAGGLGLLR+PDW S  YV
Sbjct: 16  APLGPDISGPQLVAAVANAGGLGLLRAPDWESPDYV 51

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g03700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG15g03700 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K422_CUCSA1.5e-1450.45Uncharacterized protein OS=Cucumis sativus GN=Csa_7G064010 PE=4 SV=1[more]
A0A022PW68_ERYGU2.1e-0886.11Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a009533mg PE=4 SV=1[more]
W9SAP4_9ROSA2.1e-0886.11Putative nitronate monooxygenase OS=Morus notabilis GN=L484_010808 PE=4 SV=1[more]
B9IJE3_POPTR2.1e-0886.11Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s07870g PE=4 SV=1[more]
A0A166GMA6_DAUCA2.1e-0886.11Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_001777 PE=4 SV=1[more]
BLAST of Cp4.1LG15g03700 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G64250.21.2e-1080.56 Aldolase-type TIM barrel family protein[more]
BLAST of Cp4.1LG15g03700 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778724449|ref|XP_011658807.1|2.1e-1450.45PREDICTED: nitronate monooxygenase isoform X1 [Cucumis sativus][more]
gi|1012250541|ref|XP_015943467.1|1.3e-0888.89PREDICTED: nitronate monooxygenase [Arachis duranensis][more]
gi|659110334|ref|XP_008455173.1|1.3e-0888.89PREDICTED: nitronate monooxygenase isoform X1 [Cucumis melo][more]
gi|703160043|ref|XP_010112403.1|3.0e-0886.11putative nitronate monooxygenase [Morus notabilis][more]
gi|1021051343|gb|KZN09121.1|3.0e-0886.11hypothetical protein DCAR_001777 [Daucus carota subsp. sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0046482 para-aminobenzoic acid metabolic process
cellular_component GO:0005829 cytosol
molecular_function GO:0051213 dioxygenase activity
molecular_function GO:0018580 nitronate monooxygenase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g03700.1Cp4.1LG15g03700.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG15g03700Silver-seed gourdcarcpeB0401
Cp4.1LG15g03700Silver-seed gourdcarcpeB1091
Cp4.1LG15g03700Cucumber (Chinese Long) v3cpecucB0303
Cp4.1LG15g03700Cucumber (Chinese Long) v3cpecucB0323
Cp4.1LG15g03700Wax gourdcpewgoB0317
Cp4.1LG15g03700Cucurbita pepo (Zucchini)cpecpeB269
Cp4.1LG15g03700Cucurbita pepo (Zucchini)cpecpeB279
Cp4.1LG15g03700Cucumber (Gy14) v1cgycpeB0594
Cp4.1LG15g03700Cucurbita maxima (Rimu)cmacpeB116
Cp4.1LG15g03700Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g03700Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g03700Wild cucumber (PI 183967)cpecpiB258
Cp4.1LG15g03700Cucumber (Chinese Long) v2cpecuB258
Cp4.1LG15g03700Bottle gourd (USVL1VR-Ls)cpelsiB208
Cp4.1LG15g03700Watermelon (Charleston Gray)cpewcgB218
Cp4.1LG15g03700Watermelon (97103) v1cpewmB237
Cp4.1LG15g03700Cucumber (Gy14) v2cgybcpeB337
Cp4.1LG15g03700Cucumber (Gy14) v2cgybcpeB911
Cp4.1LG15g03700Melon (DHL92) v3.6.1cpemedB267