Cp4.1LG15g03270 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG15g03270
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Pathogenesis-related protein 1
Location	Cp4.1LG15 : 4410818 .. 4411318 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCTCGTAAAGATTTCCTTCTCTCTCTTTTGTGTCTTCTGTATCACTATCCTTCCTTCGTCTCTCGCTCAAGACTCCCCTCAAGACTATGTTGATGCTCACAATATTGCTCGTTCTCAAGTGAGCGCTGTCCAAGTTGGCATCAAACCCATCCAGTGGGATGAAGAACTTGCAAACTACGCTACCCAATATGCCAATGAACGTAGCAACGACTGTCAATTGTTGCACTCTAATGGGCCTTATGGCGAGAATCTTGCAATGCATTCTAGTGGAATGACAGGCATTGAAGCAGTTCAAATGTGGGTGGATGAGCAACAATTCTACGATTATGCCTCCAACACCTGCACGGAAGGAAAAATGTGCGGCCACTACACTCAAGTGGTGTGGCAAAACACAACAAAAGTTGGATGTGCAAAAGTGAGGTGCAACAATGGCGGTACATTCATCACCTGCAACTATGACCCACCAGGCAATGTCATTGGCGAGTGGCCATATTAA

mRNA sequence

ATGGGTCTCGTAAAGATTTCCTTCTCTCTCTTTTGTGTCTTCTGTATCACTATCCTTCCTTCGTCTCTCGCTCAAGACTCCCCTCAAGACTATGTTGATGCTCACAATATTGCTCGTTCTCAAGTGAGCGCTGTCCAAGTTGGCATCAAACCCATCCAGTGGGATGAAGAACTTGCAAACTACGCTACCCAATATGCCAATGAACGTAGCAACGACTGTCAATTGTTGCACTCTAATGGGCCTTATGGCGAGAATCTTGCAATGCATTCTAGTGGAATGACAGGCATTGAAGCAGTTCAAATGTGGGTGGATGAGCAACAATTCTACGATTATGCCTCCAACACCTGCACGGAAGGAAAAATGTGCGGCCACTACACTCAAGTGGTGTGGCAAAACACAACAAAAGTTGGATGTGCAAAAGTGAGGTGCAACAATGGCGGTACATTCATCACCTGCAACTATGACCCACCAGGCAATGTCATTGGCGAGTGGCCATATTAA

Coding sequence (CDS)

ATGGGTCTCGTAAAGATTTCCTTCTCTCTCTTTTGTGTCTTCTGTATCACTATCCTTCCTTCGTCTCTCGCTCAAGACTCCCCTCAAGACTATGTTGATGCTCACAATATTGCTCGTTCTCAAGTGAGCGCTGTCCAAGTTGGCATCAAACCCATCCAGTGGGATGAAGAACTTGCAAACTACGCTACCCAATATGCCAATGAACGTAGCAACGACTGTCAATTGTTGCACTCTAATGGGCCTTATGGCGAGAATCTTGCAATGCATTCTAGTGGAATGACAGGCATTGAAGCAGTTCAAATGTGGGTGGATGAGCAACAATTCTACGATTATGCCTCCAACACCTGCACGGAAGGAAAAATGTGCGGCCACTACACTCAAGTGGTGTGGCAAAACACAACAAAAGTTGGATGTGCAAAAGTGAGGTGCAACAATGGCGGTACATTCATCACCTGCAACTATGACCCACCAGGCAATGTCATTGGCGAGTGGCCATATTAA

Protein sequence

MGLVKISFSLFCVFCITILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANYATQYANERSNDCQLLHSNGPYGENLAMHSSGMTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQVVWQNTTKVGCAKVRCNNGGTFITCNYDPPGNVIGEWPY

Homology

[Close]

BLAST of Cp4.1LG15g03270 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.1e-49
Identity = 87/152 (57.24%), Postives = 116/152 (76.32%), Query Frame = 1


Query: 16  ITILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANYATQYANERSNDCQL 75
           + I  SS AQ+S QDY+DAHN AR+ V     G++P+ WD  +A YA  Y ++ + DC L
Sbjct: 22  LIISHSSHAQNSQQDYLDAHNTARADV-----GVEPLTWDNGVAAYAQNYVSQLAADCNL 81

Query: 76  LHSNGPYGENLAMHSSG-MTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQVVWQNTT 135
           +HS+G YGENLA  S   MT  +AV+MWVDE+Q+YD+ SNTC +G++CGHYTQVVW+N+ 
Sbjct: 82  VHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSV 141

Query: 136 KVGCAKVRCNNGGTFITCNYDPPGNVIGEWPY 167
           +VGCA+V+CNNGG  ++CNYDPPGNVIG+ PY
Sbjct: 142 RVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of Cp4.1LG15g03270 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.2e-48
Identity = 86/152 (56.58%), Postives = 116/152 (76.32%), Query Frame = 1


Query: 16  ITILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANYATQYANERSNDCQL 75
           + I  S  AQ+S QDY+DAHN AR+ V     G++P+ WD+++A YA  YA++ + DC L
Sbjct: 22  LVISHSCRAQNSQQDYLDAHNTARADV-----GVEPLTWDDQVAAYAQNYASQLAADCNL 81

Query: 76  LHSNGPYGENLAMHSSG-MTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQVVWQNTT 135
           +HS+G YGENLA  S   MT  +AV+MWVDE+Q+YD+ SNTC +G++CGHYTQVVW+N+ 
Sbjct: 82  VHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSV 141

Query: 136 KVGCAKVRCNNGGTFITCNYDPPGNVIGEWPY 167
           +VGCA+V+CNNGG  ++CNYDPPGN  GE PY
Sbjct: 142 RVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of Cp4.1LG15g03270 vs. Swiss-Prot
Match: PR1_SAMNI (Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 5.9e-48
Identity = 93/162 (57.41%), Postives = 116/162 (71.60%), Query Frame = 1


Query: 7   SFSLFCVFCITILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANYATQYA 66
           S +L CV  + ++  S+AQ+SPQDYVDAHN ARS   AV VG  P+ WDE +A +A QYA
Sbjct: 11  SVALVCVVALVMVQYSVAQNSPQDYVDAHNAARS---AVNVG--PVTWDESVAAFARQYA 70

Query: 67  NERSNDCQLLHSNGP-YGENLAMHSS-GMTGIEAVQMWVDEQQFYDYASNTCTEGKMCGH 126
             R+ DC+L+HS  P YGENLA  S   +TG  AV MWV E+  Y+  +NTC  GK+CGH
Sbjct: 71  QSRAGDCRLVHSGDPRYGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGH 130

Query: 127 YTQVVWQNTTKVGCAKVRCNNGGTFITCNYDPPGNVIGEWPY 167
           YTQVVW+N+ ++GCA+VRCNNG  FITCNY PPGN  G+ PY
Sbjct: 131 YTQVVWRNSVRIGCARVRCNNGAWFITCNYSPPGNYAGQRPY 167

[Close]

BLAST of Cp4.1LG15g03270 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 5.9e-48
Identity = 91/166 (54.82%), Postives = 117/166 (70.48%), Query Frame = 1


Query: 1   MGLVKISFSLFCVFCITILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELAN 60
           MG +    + F  F I ++ SS AQ+SPQDY++ HN AR QV     G+ P+ WD  LA 
Sbjct: 1   MGFLTTIVACFITFAI-LIHSSKAQNSPQDYLNPHNAARRQV-----GVGPMTWDNRLAA 60

Query: 61  YATQYANERSNDCQLLHSNGPYGENLAMHSSGMTGIEAVQMWVDEQQFYDYASNTCTEGK 120
           YA  YAN+R  DC ++HS+GPYGENLA     +    AV+MWVDE++FYDY SN+C  G 
Sbjct: 61  YAQNYANQRIGDCGMIHSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCV-GG 120

Query: 121 MCGHYTQVVWQNTTKVGCAKVRCNNGGTFITCNYDPPGNVIGEWPY 167
           +CGHYTQVVW+N+ ++GCA+VR NNG  FITCNYDPPGN IG+ P+
Sbjct: 121 VCGHYTQVVWRNSVRLGCARVRSNNGWFFITCNYDPPGNFIGQRPF 159

[Close]

BLAST of Cp4.1LG15g03270 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.0e-47
Identity = 85/143 (59.44%), Postives = 107/143 (74.83%), Query Frame = 1


Query: 24  AQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANYATQYANERSNDCQLLHSNGPYG 83
           AQDS QDYV+AHN ARSQ+     G+ P+QWDE LA YA  YAN+   DC+L+HS GPYG
Sbjct: 26  AQDSQQDYVNAHNQARSQI-----GVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYG 85

Query: 84  ENLAMHSSGMTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQVVWQNTTKVGCAKVRC 143
           ENLA     ++G+ AV +WV+E+  Y+Y +NTC    +CGHYTQVVW+N+ ++GCAKVRC
Sbjct: 86  ENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKVRC 145

Query: 144 NNGGTFITCNYDPPGNVIGEWPY 167
           NNGGT I+CNYDPPGN   + PY
Sbjct: 146 NNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of Cp4.1LG15g03270 vs. TrEMBL
Match: F2YMM9_CUCPE (Pathogenesis-related protein 1 (Fragment) OS=Cucurbita pepo GN=PR1 PE=2 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 9.5e-61
Identity = 112/114 (98.25%), Postives = 112/114 (98.25%), Query Frame = 1


Query: 27  SPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANYATQYANERSNDCQLLHSNGPYGENL 86
           SPQDYVDAHNIARSQVS VQVGIKPIQWDEELANYATQYANERSNDCQLLHSNGPYGENL
Sbjct: 1   SPQDYVDAHNIARSQVSTVQVGIKPIQWDEELANYATQYANERSNDCQLLHSNGPYGENL 60

Query: 87  AMHSSGMTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQVVWQNTTKVGCAK 141
           AMHSS MTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQVVWQNTTKVGCAK
Sbjct: 61  AMHSSEMTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQVVWQNTTKVGCAK 114

[Close]

BLAST of Cp4.1LG15g03270 vs. TrEMBL
Match: A0A0A0K6A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.7e-57
Identity = 101/164 (61.59%), Postives = 130/164 (79.27%), Query Frame = 1


Query: 4   VKISFSLFCVFCITILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANYAT 63
           + +S SLFCV    +LPSSLAQDSPQD++DAHN AR+Q      G++P+QWDE +A++A 
Sbjct: 6   LSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQD-----GVEPVQWDETVASFAL 65

Query: 64  QYANERSNDCQLLHSNGPYGENLAMHSSGMTGIEAVQMWVDEQQFYDYASNTCTEGKMCG 123
           QYAN+R NDC L+HS GPYGEN+A     ++G  AV+MWV+E++FYDY SNTC   ++CG
Sbjct: 66  QYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCG 125

Query: 124 HYTQVVWQNTTKVGCAKVRC-NNGGTFITCNYDPPGNVIGEWPY 167
           HYTQVVW+N+ ++GCAKV C NNGGTFITCNYDPPGN +G+ PY
Sbjct: 126 HYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

[Close]

BLAST of Cp4.1LG15g03270 vs. TrEMBL
Match: A0A0A0K2V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070255 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.9e-57
Identity = 103/168 (61.31%), Postives = 135/168 (80.36%), Query Frame = 1


Query: 1   MGLVKISFSLFCVF-CITILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELA 60
           M L+ +S  LFCV  C T+LPSSLAQDSPQDYV++HN AR+ V     G+ PI+WDE++A
Sbjct: 1   MDLLNLSCILFCVLSCFTMLPSSLAQDSPQDYVNSHNHARAAV-----GVGPIKWDEKVA 60

Query: 61  NYATQYANERSNDCQLLHSNGPYGENLAMHSSGMTGIEAVQMWVDEQQFYDYASNTCTEG 120
           NY+  YAN+R NDC+L+HSNGPYGEN+A  S  ++GI AV++WVDE+Q+Y+Y SN+C  G
Sbjct: 61  NYSRYYANKRMNDCRLVHSNGPYGENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCASG 120

Query: 121 KMCGHYTQVVWQNTTKVGCAKVRC-NNGGTFITCNYDPPGNVIGEWPY 167
           K+CGHYTQVVW+N+ ++GCAKV+C N GG FI CNYDP GN++G+ PY
Sbjct: 121 KVCGHYTQVVWKNSMRLGCAKVKCKNKGGAFIVCNYDPRGNIVGQRPY 163

[Close]

BLAST of Cp4.1LG15g03270 vs. TrEMBL
Match: M5VJ82_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa1027191mg PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 4.6e-55
Identity = 104/166 (62.65%), Postives = 125/166 (75.30%), Query Frame = 1


Query: 1   MGLVKISFSLFCVFCITILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELAN 60
           MGL KI  +L CV    +L S+ AQD+PQDYV AHN AR+   AV VG  P+ WDE+L  
Sbjct: 1   MGLSKILLALVCVLGSALLQSTHAQDTPQDYVTAHNNARA---AVNVG--PLSWDEKLQG 60

Query: 61  YATQYANERSNDCQLLHSNGPYGENLAMHSSGMTGIEAVQMWVDEQQFYDYASNTCTEGK 120
           YA  YAN+   DC L+HS GPYGENLAM ++ ++G +AV MWV E+  Y+Y SNTC +GK
Sbjct: 61  YAQDYANQHIGDCNLVHSGGPYGENLAMSTADLSGTDAVNMWVAEKADYNYDSNTCADGK 120

Query: 121 MCGHYTQVVWQNTTKVGCAKVRCNNGGTFITCNYDPPGNVIGEWPY 167
           MCGHYTQVVW+NT +VGCAKVRCN+GGTFI CNYDPPGN +GE PY
Sbjct: 121 MCGHYTQVVWRNTARVGCAKVRCNSGGTFIGCNYDPPGNYVGEKPY 161

[Close]

BLAST of Cp4.1LG15g03270 vs. TrEMBL
Match: V4MET1_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10026438mg PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.1e-53
Identity = 95/161 (59.01%), Postives = 124/161 (77.02%), Query Frame = 1


Query: 6   ISFSLFCVFCITILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANYATQY 65
           ++ ++F VF +++     AQDSPQDY+DAHN AR+      VG+ P++WDE +A YA  Y
Sbjct: 12  LATTIFLVFVVSLR----AQDSPQDYLDAHNKARAA-----VGVGPLRWDERVAAYARDY 71

Query: 66  ANERSNDCQLLHSNGPYGENLAMHSSGMTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHY 125
           AN+R  DC L HS+GPYGEN+A  S  M+G++A+ MWV+E+  Y+Y SNTC  GK+CGHY
Sbjct: 72  ANQRRGDCALQHSSGPYGENIAWSSGDMSGVQAINMWVNEKVDYNYGSNTCASGKVCGHY 131

Query: 126 TQVVWQNTTKVGCAKVRCNNGGTFITCNYDPPGNVIGEWPY 167
           TQVVW+N+ ++GCAKVRCNNG TFITCNYDPPGN IG+WPY
Sbjct: 132 TQVVWRNSVRMGCAKVRCNNGQTFITCNYDPPGNFIGQWPY 163

[Close]

BLAST of Cp4.1LG15g03270 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 209.9 bits (533), Expect = 1.2e-54
Identity = 93/157 (59.24%), Postives = 115/157 (73.25%), Query Frame = 1


Query: 10  LFCVFCITILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANYATQYANER 69
           L   F + ++    AQDSPQD++  HN AR+     +VG+ P++WDE++A YA  YAN+R
Sbjct: 12  LAITFFLVLIVHLKAQDSPQDFLAVHNRARA-----EVGVGPLRWDEKVAAYARNYANQR 71

Query: 70  SNDCQLLHSNGPYGENLAMHSSGMTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQVV 129
             DC + HS+G YGEN+A  S  MTG+ AV MWVDEQ  YDY SNTC   K CGHYTQVV
Sbjct: 72  KGDCAMKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVV 131

Query: 130 WQNTTKVGCAKVRCNNGGTFITCNYDPPGNVIGEWPY 167
           W+N+ ++GCAKVRCNNG TFITCNYDPPGN +GEWPY
Sbjct: 132 WRNSERLGCAKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of Cp4.1LG15g03270 vs. TAIR10
Match: AT3G19690.1 (AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 198.0 bits (502), Expect = 4.7e-51
Identity = 91/168 (54.17%), Postives = 123/168 (73.21%), Query Frame = 1


Query: 1   MGLVKISFSLFCVFCITILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELAN 60
           M L+K +  +  +  I +   SLA+D  Q +++AHN AR++V     G+ P+ WD+E+A 
Sbjct: 1   MSLLKTN--ILFLLAIALFYGSLAEDLQQQFLEAHNEARNEV-----GLDPLVWDDEVAA 60

Query: 61  YATQYANERSNDCQLLHSNGPYGENLAMHSSGMTGIEAVQMWVDEQQFYDYASNTCTE-- 120
           YA  YAN+R NDC L+HSNGP+GEN+AM S  M+  +A +MW++E+Q+YDY SNTC +  
Sbjct: 61  YAASYANQRINDCALVHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPN 120

Query: 121 GKMCGHYTQVVWQNTTKVGCAKVRCNNGGTFITCNYDPPGNVIGEWPY 167
           G  C HYTQVVW+NT ++GCAKV CN+GGTFITCNYDPPGN IGE P+
Sbjct: 121 GGTCLHYTQVVWKNTVRLGCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

[Close]

BLAST of Cp4.1LG15g03270 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 191.0 bits (484), Expect = 5.7e-49
Identity = 85/143 (59.44%), Postives = 107/143 (74.83%), Query Frame = 1


Query: 24  AQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANYATQYANERSNDCQLLHSNGPYG 83
           AQDS QDYV+AHN ARSQ+     G+ P+QWDE LA YA  YAN+   DC+L+HS GPYG
Sbjct: 26  AQDSQQDYVNAHNQARSQI-----GVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYG 85

Query: 84  ENLAMHSSGMTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQVVWQNTTKVGCAKVRC 143
           ENLA     ++G+ AV +WV+E+  Y+Y +NTC    +CGHYTQVVW+N+ ++GCAKVRC
Sbjct: 86  ENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKVRC 145

Query: 144 NNGGTFITCNYDPPGNVIGEWPY 167
           NNGGT I+CNYDPPGN   + PY
Sbjct: 146 NNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of Cp4.1LG15g03270 vs. TAIR10
Match: AT5G26130.1 (AT5G26130.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 187.2 bits (474), Expect = 8.2e-48
Identity = 87/159 (54.72%), Postives = 108/159 (67.92%), Query Frame = 1


Query: 10  LFCVFCITILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANYATQYANER 69
           LF  F + +     AQD PQDY+D HN AR+QV     G+ P++W      YA  YA +R
Sbjct: 17  LFLAFAVPLK----AQDQPQDYLDEHNRARTQV-----GVPPMKWHAGAEQYAWNYAQQR 76

Query: 70  SNDCQLLHSN--GPYGENLAMHSSGMTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQ 129
             DC L HSN  G YGENLA     ++G EAV++WV+E+  Y YASNTC++GK CGHYTQ
Sbjct: 77  KGDCSLTHSNSNGLYGENLAWSGGALSGAEAVKLWVNEKSDYIYASNTCSDGKQCGHYTQ 136

Query: 130 VVWQNTTKVGCAKVRCNNGGTFITCNYDPPGNVIGEWPY 167
           VVW+ +  VGCAKV+C+NGGTF+TCNY PPGN  G WPY
Sbjct: 137 VVWRTSEWVGCAKVKCDNGGTFVTCNYYPPGNYRGRWPY 166

[Close]

BLAST of Cp4.1LG15g03270 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 186.0 bits (471), Expect = 1.8e-47
Identity = 85/149 (57.05%), Postives = 107/149 (71.81%), Query Frame = 1


Query: 18  ILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANYATQYANERSNDCQLLH 77
           +LPS  AQDSPQDY+  HN AR  V     G+ P+QWDE +A YA  YA +   +C+L+H
Sbjct: 21  VLPSK-AQDSPQDYLRVHNQARGAV-----GVGPMQWDERVAAYARSYAEQLRGNCRLIH 80

Query: 78  SNGPYGENLAMHSSGMTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQVVWQNTTKVG 137
           S GPYGENLA  S  ++G+ AV MWV E+  Y+YA+NTC    +CGHYTQVVW+ + ++G
Sbjct: 81  SGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWRKSVRLG 140

Query: 138 CAKVRCNNGGTFITCNYDPPGNVIGEWPY 167
           CAKVRCNNGGT I+CNYDP GN + E PY
Sbjct: 141 CAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Cp4.1LG15g03270 vs. NCBI nr
Match: gi|326910911|gb|AEA11234.1| (pathogenesis-related protein 1 [Cucurbita pepo])

HSP 1 Score: 241.1 bits (614), Expect = 1.4e-60
Identity = 112/114 (98.25%), Postives = 112/114 (98.25%), Query Frame = 1


Query: 27  SPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANYATQYANERSNDCQLLHSNGPYGENL 86
           SPQDYVDAHNIARSQVS VQVGIKPIQWDEELANYATQYANERSNDCQLLHSNGPYGENL
Sbjct: 1   SPQDYVDAHNIARSQVSTVQVGIKPIQWDEELANYATQYANERSNDCQLLHSNGPYGENL 60

Query: 87  AMHSSGMTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQVVWQNTTKVGCAK 141
           AMHSS MTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQVVWQNTTKVGCAK
Sbjct: 61  AMHSSEMTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQVVWQNTTKVGCAK 114

[Close]

BLAST of Cp4.1LG15g03270 vs. NCBI nr
Match: gi|778724783|ref|XP_011658861.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 230.3 bits (586), Expect = 2.4e-57
Identity = 101/164 (61.59%), Postives = 130/164 (79.27%), Query Frame = 1


Query: 4   VKISFSLFCVFCITILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANYAT 63
           + +S SLFCV    +LPSSLAQDSPQD++DAHN AR+Q      G++P+QWDE +A++A 
Sbjct: 6   LSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQD-----GVEPVQWDETVASFAL 65

Query: 64  QYANERSNDCQLLHSNGPYGENLAMHSSGMTGIEAVQMWVDEQQFYDYASNTCTEGKMCG 123
           QYAN+R NDC L+HS GPYGEN+A     ++G  AV+MWV+E++FYDY SNTC   ++CG
Sbjct: 66  QYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCG 125

Query: 124 HYTQVVWQNTTKVGCAKVRC-NNGGTFITCNYDPPGNVIGEWPY 167
           HYTQVVW+N+ ++GCAKV C NNGGTFITCNYDPPGN +G+ PY
Sbjct: 126 HYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

[Close]

BLAST of Cp4.1LG15g03270 vs. NCBI nr
Match: gi|778724786|ref|XP_004136929.2| (PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 229.6 bits (584), Expect = 4.1e-57
Identity = 103/168 (61.31%), Postives = 135/168 (80.36%), Query Frame = 1


Query: 1   MGLVKISFSLFCVF-CITILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELA 60
           M L+ +S  LFCV  C T+LPSSLAQDSPQDYV++HN AR+ V     G+ PI+WDE++A
Sbjct: 1   MDLLNLSCILFCVLSCFTMLPSSLAQDSPQDYVNSHNHARAAV-----GVGPIKWDEKVA 60

Query: 61  NYATQYANERSNDCQLLHSNGPYGENLAMHSSGMTGIEAVQMWVDEQQFYDYASNTCTEG 120
           NY+  YAN+R NDC+L+HSNGPYGEN+A  S  ++GI AV++WVDE+Q+Y+Y SN+C  G
Sbjct: 61  NYSRYYANKRMNDCRLVHSNGPYGENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCASG 120

Query: 121 KMCGHYTQVVWQNTTKVGCAKVRC-NNGGTFITCNYDPPGNVIGEWPY 167
           K+CGHYTQVVW+N+ ++GCAKV+C N GG FI CNYDP GN++G+ PY
Sbjct: 121 KVCGHYTQVVWKNSMRLGCAKVKCKNKGGAFIVCNYDPRGNIVGQRPY 163

[Close]

BLAST of Cp4.1LG15g03270 vs. NCBI nr
Match: gi|659110129|ref|XP_008455064.1| (PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo])

HSP 1 Score: 227.3 bits (578), Expect = 2.0e-56
Identity = 101/164 (61.59%), Postives = 130/164 (79.27%), Query Frame = 1


Query: 4   VKISFSLFCVFCITILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANYAT 63
           + +S SLFCV    +LPSSLAQDSP+D+V+AHN AR+QV     G+ P+ WDE +A++A 
Sbjct: 6   LSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQV-----GVGPVHWDERVASFAR 65

Query: 64  QYANERSNDCQLLHSNGPYGENLAMHSSGMTGIEAVQMWVDEQQFYDYASNTCTEGKMCG 123
           QYAN+R NDC+L+HS GPYGEN+A     ++G  AVQMWV+E+QFY+Y SNTC  GK+CG
Sbjct: 66  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 125

Query: 124 HYTQVVWQNTTKVGCAKVRC-NNGGTFITCNYDPPGNVIGEWPY 167
           HYTQVVW+N+ ++GCAKVRC NN GTFI CNY+P GN+IG+ PY
Sbjct: 126 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]

BLAST of Cp4.1LG15g03270 vs. NCBI nr
Match: gi|659110127|ref|XP_008455062.1| (PREDICTED: pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 226.5 bits (576), Expect = 3.5e-56
Identity = 101/168 (60.12%), Postives = 134/168 (79.76%), Query Frame = 1


Query: 1   MGLVKISFSLFCVF-CITILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELA 60
           M L+ +SF LFCV  C T+LPSSLAQDSPQDY++ HN AR+ V      ++ IQWDE++A
Sbjct: 1   MDLLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVR-----VRLIQWDEKVA 60

Query: 61  NYATQYANERSNDCQLLHSNGPYGENLAMHSSGMTGIEAVQMWVDEQQFYDYASNTCTEG 120
           NY+ QYAN R NDC+L+HSNGPYGEN+A  S  ++G +AV++WV+E+Q+YDY +N+C  G
Sbjct: 61  NYSRQYANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASG 120

Query: 121 KMCGHYTQVVWQNTTKVGCAKVRC-NNGGTFITCNYDPPGNVIGEWPY 167
           K+CGHYTQVVW+N+ ++GCAKV+C N GG FI CNYDP GN++G+ PY
Sbjct: 121 KVCGHYTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 163

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g03270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PR1B_TOBAC	3.1e-49	57.24	Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1	[more]
PR1A_TOBAC	1.2e-48	56.58	Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1	[more]
PR1_SAMNI	5.9e-48	57.41	Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1	[more]
PRB1_TOBAC	5.9e-48	54.82	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PRB1_ARATH	1.0e-47	59.44	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1	[more]

BLAST of Cp4.1LG15g03270 vs. TrEMBL


Match Name	E-value	Identity	Description
F2YMM9_CUCPE	9.5e-61	98.25	Pathogenesis-related protein 1 (Fragment) OS=Cucurbita pepo GN=PR1 PE=2 SV=1	[more]
A0A0A0K6A4_CUCSA	1.7e-57	61.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1	[more]
A0A0A0K2V9_CUCSA	2.9e-57	61.31	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070255 PE=3 SV=1	[more]
M5VJ82_PRUPE	4.6e-55	62.65	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa1027191mg PE=3 SV=1	[more]
V4MET1_EUTSA	1.1e-53	59.01	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10026438mg PE=3 SV=1	[more]

BLAST of Cp4.1LG15g03270 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33720.1	1.2e-54	59.24	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT3G19690.1	4.7e-51	54.17	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14580.1	5.7e-49	59.44	basic pathogenesis-related protein 1	[more]
AT5G26130.1	8.2e-48	54.72	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14610.1	1.8e-47	57.05	pathogenesis-related gene 1	[more]

BLAST of Cp4.1LG15g03270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|326910911\|gb\|AEA11234.1\|	1.4e-60	98.25	pathogenesis-related protein 1 [Cucurbita pepo]	[more]
gi\|778724783\|ref\|XP_011658861.1\|	2.4e-57	61.59	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|778724786\|ref\|XP_004136929.2\|	4.1e-57	61.31	PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|659110129\|ref\|XP_008455064.1\|	2.0e-56	61.59	PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo]	[more]
gi\|659110127\|ref\|XP_008455062.1\|	3.5e-56	60.12	PREDICTED: pathogenesis-related protein 1-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

Vocabulary: **INTERPRO**
Term	Definition
IPR018244	Allrgn_V5/Tpx1_CS
IPR014044	CAP_domain
IPR001283	Allrgn_V5/Tpx1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g03270.1	Cp4.1LG15g03270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 98..111 score: 3.0E-20coord: 149..162 score: 3.0E-20coord: 122..138 score: 3.0E-20coord: 52..70 score: 3.0
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 1..166 score: 1.1
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 21..166 score: 2.1
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 33..154 score: 1.6
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 26..162 score: 3.8
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 18..166 score: 3.27
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 123..133 scor
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 149..160 scor
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 1..166 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG15g03270	Cucurbita maxima (Rimu)	cmacpeB522
Cp4.1LG15g03270	Cucurbita maxima (Rimu)	cmacpeB612
Cp4.1LG15g03270	Cucurbita moschata (Rifu)	cmocpeB481
Cp4.1LG15g03270	Cucurbita moschata (Rifu)	cmocpeB560
Cp4.1LG15g03270	Bottle gourd (USVL1VR-Ls)	cpelsiB210
Cp4.1LG15g03270	Bottle gourd (USVL1VR-Ls)	cpelsiB216
Cp4.1LG15g03270	Cucumber (Gy14) v2	cgybcpeB339
Cp4.1LG15g03270	Melon (DHL92) v3.6.1	cpemedB269
Cp4.1LG15g03270	Silver-seed gourd	carcpeB1091
Cp4.1LG15g03270	Cucumber (Chinese Long) v3	cpecucB0306