Cp4.1LG15g02890 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG15g02890
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionABC transporter C family member 2
LocationCp4.1LG15 : 3369294 .. 3370525 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAGTCTTGTTCCACTTGCTAGACAGTCTAGAGAGAGTTCAGAATGTGGAGGCCAATGCATGGAACCCTAAGACAATTTCAGAGAAGGAGGCTTTGCGACATTGTGGCTTAGATTCATAAATGCATTCACTGTTTTCGAAATTCTCAGAGTTTGAATCTGTAAACGACGGAAACCAGTGATTTTATTTCACTGGGGGAACTGCACGTACTGAGAATTTCAGTTCTTCGTTTAAGGTGCTTGGAACTGATTGTTCTGCTGTTGCATGGAAGGAATTTTATTGGAATCGCTACTCATTTATTTTCATCGATTTCCTTGCCAACATTAACAATTGGAATCAAGAATGGGCATAGAGCTGTTTGTTTGGTATTGTCGTCCAGTTTTTGGTGGCGTGTGGACAAATGCTGTGGATAATGCTTTTGGCGCTTATACACCATGTGCCATTGACTCTCTGGTGGTTGTTATTTCTCACCTGCTTGTTCTAGGTCTATGTATCTACAGAATATGGCTGATGAAAAAGAGTTCTGCCGTACAGAGGTTTTGTTTGAAGTCAAAGATTTACAATTATGTACTGTGTTTGTTGGCTGGTTACTGTACATCTGTGCTTTTATTCAAATTGATCATGGGAATTTCAGTCTTGAATTTAGATGGGCAGGCTGCACTCGGTCCATACGAGGTAGAGTGTTCCCTACAATACTTCGAATTATTTTATCCTGAAATTTAACATTCACACTGCAATGGCAATGTTGGCAATATCATTTTAAAAGGTTGATATGACCTGCAGTATGATATATGGGCGCTATAGGAAGAATTTGGTTTACTTTGTATTACTCTTTAGAACCAAAGATTGTAAGTGTGAAAAAGATTGAGACATCGTATGTTTAACTTGATGTACTAGGCAAGAAGAAATTGACTAACTAAGAGGTAATTTTGTTTAGTTTTGGACATGGTGAGTGGCTTTTTGATCGAGTTCACAGATATTAAACCTTACGTCCTTTTGTTTCAGGTTGTTGCCCTGATAATTCAGGCCCTTACTTGGTTCTCAATGGTTGTAATGCTTGTTGCTGAAACCAAAGTTTATATTTTTGAATTTCGATGGATCATCAGATTTGGAGTTTTCTATATATTAGTAGCGGACGGCGTGATGCTCAACCTAATTCTTTCGGTGAAGGATTTGTACAAGAGGTATTTCTTATAAAAGCTATTATGTCTAAATTTCAAGTTACCATCATTT

mRNA sequence

ACAGTCTTGTTCCACTTGCTAGACAGTCTAGAGAGAGTTCAGAATGTGGAGGCCAATGCATGGAACCCTAAGACAATTTCAGAGAAGGAGGCTTTGCGACATTGTGGCTTAGATTCATAAATGCATTCACTGTTTTCGAAATTCTCAGAGTTTGAATCTGTAAACGACGGAAACCAGTGATTTTATTTCACTGGGGGAACTGCACGTACTGAGAATTTCAGTTCTTCGTTTAAGGTGCTTGGAACTGATTGTTCTGCTGTTGCATGGAAGGAATTTTATTGGAATCGCTACTCATTTATTTTCATCGATTTCCTTGCCAACATTAACAATTGGAATCAAGAATGGGCATAGAGCTGTTTGTTTGGTATTGTCGTCCAGTTTTTGGTGGCGTGTGGACAAATGCTGTGGATAATGCTTTTGGCGCTTATACACCATGTGCCATTGACTCTCTGGTGGTTGTTATTTCTCACCTGCTTGTTCTAGGTCTATGTATCTACAGAATATGGCTGATGAAAAAGAGTTCTGCCGTACAGAGGTTTTGTTTGAAGTCAAAGATTTACAATTATGTACTGTGTTTGTTGGCTGGTTACTGTACATCTGTGCTTTTATTCAAATTGATCATGGGAATTTCAGTCTTGAATTTAGATGGGCAGGCTGCACTCGGTCCATACGAGGTTGATATGACCTGCAGTATGATATATGGGCGCTATAGGAAGAATTTGGTTTACTTTGTATTACTCTTTAGAACCAAAGATTGTTGTTGCCCTGATAATTCAGGCCCTTACTTGGTTCTCAATGGTTGTAATGCTTGTTGCTGAAACCAAAGTTTATATTTTTGAATTTCGATGGATCATCAGATTTGGAGTTTTCTATATATTAGTAGCGGACGGCGTGATGCTCAACCTAATTCTTTCGGTGAAGGATTTGTACAAGAGGTATTTCTTATAAAAGCTATTATGTCTAAATTTCAAGTTACCATCATTT

Coding sequence (CDS)

ATGGGCATAGAGCTGTTTGTTTGGTATTGTCGTCCAGTTTTTGGTGGCGTGTGGACAAATGCTGTGGATAATGCTTTTGGCGCTTATACACCATGTGCCATTGACTCTCTGGTGGTTGTTATTTCTCACCTGCTTGTTCTAGGTCTATGTATCTACAGAATATGGCTGATGAAAAAGAGTTCTGCCGTACAGAGGTTTTGTTTGAAGTCAAAGATTTACAATTATGTACTGTGTTTGTTGGCTGGTTACTGTACATCTGTGCTTTTATTCAAATTGATCATGGGAATTTCAGTCTTGAATTTAGATGGGCAGGCTGCACTCGGTCCATACGAGGTTGATATGACCTGCAGTATGATATATGGGCGCTATAGGAAGAATTTGGTTTACTTTGTATTACTCTTTAGAACCAAAGATTGTTGTTGCCCTGATAATTCAGGCCCTTACTTGGTTCTCAATGGTTGTAATGCTTGTTGCTGA

Protein sequence

MGIELFVWYCRPVFGGVWTNAVDNAFGAYTPCAIDSLVVVISHLLVLGLCIYRIWLMKKSSAVQRFCLKSKIYNYVLCLLAGYCTSVLLFKLIMGISVLNLDGQAALGPYEVDMTCSMIYGRYRKNLVYFVLLFRTKDCCCPDNSGPYLVLNGCNACC
Homology
[Close]
BLAST of Cp4.1LG15g02890 vs. Swiss-Prot
Match: AB2C_ARATH (ABC transporter C family member 2 OS=Arabidopsis thaliana GN=ABCC2 PE=1 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 2.2e-31
Identity = 68/111 (61.26%), Postives = 81/111 (72.97%), Query Frame = 1 

Query: 1   MGIELFVWYCRPVFGGVWTNAVDNAFGAYTPCAIDSLVVVISHLLVLGLCIYRIWLMKKS 60
           MG E   WYC+PV  GVWT  V NAFGAYTPCA DS V+ IS L++L LC+YRIWL  K 
Sbjct: 1   MGFEFIEWYCKPVPNGVWTKQVANAFGAYTPCATDSFVLGISQLVLLVLCLYRIWLALKD 60

Query: 61  SAVQRFCLKSKIYNYVLCLLAGYCTSVLLFKLIMGISVLNLDGQAALGPYE 112
             V+RFCL+S++YNY L LLA Y T+  LF+LIMGISVL+ DG   L P+E
Sbjct: 61  HKVERFCLRSRLYNYFLALLAAYATAEPLFRLIMGISVLDFDG-PGLPPFE 110

[Close]
BLAST of Cp4.1LG15g02890 vs. Swiss-Prot
Match: AB1C_ARATH (ABC transporter C family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.3e-31
Identity = 68/114 (59.65%), Postives = 83/114 (72.81%), Query Frame = 1 

Query: 1   MGIELFVWYCRPVFGGVWTNAVDNAFGAYTPCAIDSLVVVISHLLVLGLCIYRIWLMKKS 60
           MG E   WYC+PV  GVWT  VD AFGAYTPCAIDS V+ ISHL++L LC+YR+WL+ K 
Sbjct: 1   MGFEPLDWYCKPVPNGVWTKTVDYAFGAYTPCAIDSFVLGISHLVLLILCLYRLWLITKD 60

Query: 61  SAVQRFCLKSKIYNYVLCLLAGYCTSVLLFKLIMGISVLNLDGQAALGPYEVDM 115
             V +FCL+SK ++Y L LLA Y T+  LF+L+M ISVL+LDG A   PYE  M
Sbjct: 61  HKVDKFCLRSKWFSYFLALLAAYATAEPLFRLVMRISVLDLDG-AGFPPYEAFM 113

[Close]
BLAST of Cp4.1LG15g02890 vs. Swiss-Prot
Match: AB12C_ARATH (ABC transporter C family member 12 OS=Arabidopsis thaliana GN=ABCC12 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 8.5e-28
Identity = 58/112 (51.79%), Postives = 78/112 (69.64%), Query Frame = 1 

Query: 1   MGIELFVWYCRPVFGGVWTNAVDNAFGAYTPCAIDSLVVVISHLLVLGLCIYRIWLMKKS 60
           MG E   WYC+PV  G W  AVD AFGAYTPCAIDSLV+++SH ++LGLC YRIW++  +
Sbjct: 1   MGFEALNWYCKPVADGFWEKAVDGAFGAYTPCAIDSLVMLVSHFVLLGLCFYRIWIIFHN 60

Query: 61  SAVQRFCLKSKIYNYVLCLLAGYCTSVLLFKLIMGISVLNLDGQAALGPYEV 113
           +  Q + L+ K YN VL LLA YC    + +L+MGIS+ ++D +    P+EV
Sbjct: 61  TKAQIYVLRKKYYNCVLGLLACYCVVEPVLRLVMGISLFDMDEETDFPPFEV 112

[Close]
BLAST of Cp4.1LG15g02890 vs. Swiss-Prot
Match: AB11C_ARATH (ABC transporter C family member 11 OS=Arabidopsis thaliana GN=ABCC11 PE=2 SV=2)

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-22
Identity = 50/112 (44.64%), Postives = 73/112 (65.18%), Query Frame = 1 

Query: 1   MGIELFVWYCRPVFGGVWTNAVDNAFGAYTPCAIDSLVVVISHLLVLGLCIYRIWLMKKS 60
           MG E   WYC+P+  G W    D AFGAYTPCAIDSLV+++S+ ++LGLC YRIW+   +
Sbjct: 1   MGFEALNWYCKPIAEGFWEKTPDGAFGAYTPCAIDSLVMIVSNSVLLGLCFYRIWITLYN 60

Query: 61  SAVQRFCLKSKIYNYVLCLLAGYCTSVLLFKLIMGISVLNLDGQAALGPYEV 113
           +  Q + L+   Y+ VL +LA  C    + +L+MGIS+ ++  +  L P+EV
Sbjct: 61  AKAQIYVLRKMYYHCVLWILACCCVVEPVLRLVMGISLFDMGDETDLPPFEV 112

[Close]
BLAST of Cp4.1LG15g02890 vs. TrEMBL
Match: A0A0A0KDY1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G040635 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.1e-41
Identity = 88/112 (78.57%), Postives = 92/112 (82.14%), Query Frame = 1 

Query: 1   MGIELFVWYCRPVFGGVWTNAVDNAFGAYTPCAIDSLVVVISHLLVLGLCIYRIWLMKKS 60
           M  + F WYCRPV GGVW NAVDNAFGAYTPCAIDSLVVVISHL+VLGLCIYRIWL+KK 
Sbjct: 1   MAFKPFFWYCRPVAGGVWRNAVDNAFGAYTPCAIDSLVVVISHLVVLGLCIYRIWLIKKD 60

Query: 61  SAVQRFCLKSKIYNYVLCLLAGYCTSVLLFKLIMGISVLNLDGQAALGPYEV 113
             VQRFCLKS  YNYVLCLLA  C    L KLIMGISVLNLDGQ AL P+EV
Sbjct: 61  FKVQRFCLKSGTYNYVLCLLATCCAFEPLLKLIMGISVLNLDGQTALAPFEV 112

[Close]
BLAST of Cp4.1LG15g02890 vs. TrEMBL
Match: A0A0A0KKT9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525360 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.1e-39
Identity = 81/112 (72.32%), Postives = 91/112 (81.25%), Query Frame = 1 

Query: 1   MGIELFVWYCRPVFGGVWTNAVDNAFGAYTPCAIDSLVVVISHLLVLGLCIYRIWLMKKS 60
           M  E FVWYCRPV  GVWT AV+NA GAYTPCAIDS+V+VISHL++LGLC+YR WL+K  
Sbjct: 1   MAFEPFVWYCRPVADGVWTKAVENALGAYTPCAIDSVVIVISHLIILGLCLYRTWLIKND 60

Query: 61  SAVQRFCLKSKIYNYVLCLLAGYCTSVLLFKLIMGISVLNLDGQAALGPYEV 113
              QRFCLKSKIYNY+LCLLA YC    LF+LI GISVLNLDGQ AL P+EV
Sbjct: 61  FKTQRFCLKSKIYNYMLCLLAAYCVFEPLFRLIRGISVLNLDGQDALPPFEV 112

[Close]
BLAST of Cp4.1LG15g02890 vs. TrEMBL
Match: W9STG2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009932 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 9.7e-39
Identity = 81/112 (72.32%), Postives = 91/112 (81.25%), Query Frame = 1 

Query: 1   MGIELFVWYCRPVFGGVWTNAVDNAFGAYTPCAIDSLVVVISHLLVLGLCIYRIWLMKKS 60
           M  E FVWYCRPV  GVWT AVDNAFGAYTPCA+DSLV+ +SHL++LGLCIYRIW   K 
Sbjct: 6   MVFEPFVWYCRPVKNGVWTKAVDNAFGAYTPCAVDSLVICVSHLVLLGLCIYRIWRTNKD 65

Query: 61  SAVQRFCLKSKIYNYVLCLLAGYCTSVLLFKLIMGISVLNLDGQAALGPYEV 113
             VQRF L+SK+YNYVL LL  YCT+  LF+LIMGISVLNLDGQA L P+EV
Sbjct: 66  FTVQRFRLRSKVYNYVLGLLPAYCTAEPLFRLIMGISVLNLDGQAGLAPFEV 117

[Close]
BLAST of Cp4.1LG15g02890 vs. TrEMBL
Match: M5X2K5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000145mg PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 9.7e-39
Identity = 80/112 (71.43%), Postives = 91/112 (81.25%), Query Frame = 1 

Query: 1   MGIELFVWYCRPVFGGVWTNAVDNAFGAYTPCAIDSLVVVISHLLVLGLCIYRIWLMKKS 60
           MG     WYCRPV  GVWT AV+NAFGAYTPCA+DSLVV ISHL++LGLCIYRIW +KK 
Sbjct: 1   MGFVPLDWYCRPVAHGVWTKAVENAFGAYTPCAVDSLVVSISHLVLLGLCIYRIWRIKKD 60

Query: 61  SAVQRFCLKSKIYNYVLCLLAGYCTSVLLFKLIMGISVLNLDGQAALGPYEV 113
              QRFCL+S +YNYVL LLAGYCT+  LF+LIMGISVLNLDGQ+   P+EV
Sbjct: 61  FKAQRFCLQSNVYNYVLALLAGYCTAEPLFRLIMGISVLNLDGQSGFAPFEV 112

[Close]
BLAST of Cp4.1LG15g02890 vs. TrEMBL
Match: A0A067ERV0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043487mg PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.4e-37
Identity = 76/113 (67.26%), Postives = 90/113 (79.65%), Query Frame = 1 

Query: 1   MGIELFVWYCRPVFGGVWTNAVDNAFGAYTPCAIDSLVVVISHLLVLGLCIYRIWLMKKS 60
           M ++   WYCRPV  GVWT  VDNAFGAY PCA DSLVV +SHL+++GLC YRIWL+KK 
Sbjct: 1   MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60

Query: 61  SAVQRFCLKSKIYNYVLCLLAGYCTSVLLFKLIMGISVLNLDGQAALGPYEVD 114
             VQRFCLKSK+YNY+L  LA YCT+  LF+LIMGIS L+LDGQ+ L P+EVD
Sbjct: 61  FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEVD 113

[Close]
BLAST of Cp4.1LG15g02890 vs. TAIR10
Match: AT2G34660.1 (AT2G34660.1 multidrug resistance-associated protein 2)

HSP 1 Score: 136.7 bits (343), Expect = 1.2e-32
Identity = 68/111 (61.26%), Postives = 81/111 (72.97%), Query Frame = 1 

Query: 1   MGIELFVWYCRPVFGGVWTNAVDNAFGAYTPCAIDSLVVVISHLLVLGLCIYRIWLMKKS 60
           MG E   WYC+PV  GVWT  V NAFGAYTPCA DS V+ IS L++L LC+YRIWL  K 
Sbjct: 1   MGFEFIEWYCKPVPNGVWTKQVANAFGAYTPCATDSFVLGISQLVLLVLCLYRIWLALKD 60

Query: 61  SAVQRFCLKSKIYNYVLCLLAGYCTSVLLFKLIMGISVLNLDGQAALGPYE 112
             V+RFCL+S++YNY L LLA Y T+  LF+LIMGISVL+ DG   L P+E
Sbjct: 61  HKVERFCLRSRLYNYFLALLAAYATAEPLFRLIMGISVLDFDG-PGLPPFE 110

[Close]
BLAST of Cp4.1LG15g02890 vs. TAIR10
Match: AT1G30400.1 (AT1G30400.1 multidrug resistance-associated protein 1)

HSP 1 Score: 135.2 bits (339), Expect = 3.5e-32
Identity = 68/114 (59.65%), Postives = 83/114 (72.81%), Query Frame = 1 

Query: 1   MGIELFVWYCRPVFGGVWTNAVDNAFGAYTPCAIDSLVVVISHLLVLGLCIYRIWLMKKS 60
           MG E   WYC+PV  GVWT  VD AFGAYTPCAIDS V+ ISHL++L LC+YR+WL+ K 
Sbjct: 1   MGFEPLDWYCKPVPNGVWTKTVDYAFGAYTPCAIDSFVLGISHLVLLILCLYRLWLITKD 60

Query: 61  SAVQRFCLKSKIYNYVLCLLAGYCTSVLLFKLIMGISVLNLDGQAALGPYEVDM 115
             V +FCL+SK ++Y L LLA Y T+  LF+L+M ISVL+LDG A   PYE  M
Sbjct: 61  HKVDKFCLRSKWFSYFLALLAAYATAEPLFRLVMRISVLDLDG-AGFPPYEAFM 113

[Close]
BLAST of Cp4.1LG15g02890 vs. TAIR10
Match: AT1G30420.1 (AT1G30420.1 multidrug resistance-associated protein 12)

HSP 1 Score: 107.8 bits (268), Expect = 6.0e-24
Identity = 50/112 (44.64%), Postives = 73/112 (65.18%), Query Frame = 1 

Query: 1   MGIELFVWYCRPVFGGVWTNAVDNAFGAYTPCAIDSLVVVISHLLVLGLCIYRIWLMKKS 60
           MG E   WYC+P+  G W    D AFGAYTPCAIDSLV+++S+ ++LGLC YRIW+   +
Sbjct: 1   MGFEALNWYCKPIAEGFWEKTPDGAFGAYTPCAIDSLVMIVSNSVLLGLCFYRIWITLYN 60

Query: 61  SAVQRFCLKSKIYNYVLCLLAGYCTSVLLFKLIMGISVLNLDGQAALGPYEV 113
           +  Q + L+   Y+ VL +LA  C    + +L+MGIS+ ++  +  L P+EV
Sbjct: 61  AKAQIYVLRKMYYHCVLWILACCCVVEPVLRLVMGISLFDMGDETDLPPFEV 112

[Close]
BLAST of Cp4.1LG15g02890 vs. TAIR10
Match: AT1G30410.1 (AT1G30410.1 multidrug resistance-associated protein 13)

HSP 1 Score: 84.3 bits (207), Expect = 7.1e-17
Identity = 45/112 (40.18%), Postives = 59/112 (52.68%), Query Frame = 1 

Query: 1   MGIELFVWYCRPVFGGVWTNAVDNAFGAYTPCAIDSLVVVISHLLVLGLCIYRIWLMKKS 60
           MG E   WYC+PV  G W  AVD AFGAYTPCAIDSLV+++SH ++LGL           
Sbjct: 1   MGFEALNWYCKPVADGFWEKAVDGAFGAYTPCAIDSLVMLVSHFVLLGL----------- 60

Query: 61  SAVQRFCLKSKIYNYVLCLLAGYCTSVLLFKLIMGISVLNLDGQAALGPYEV 113
                              LA YC    + +L+MGIS+ ++D +    P+EV
Sbjct: 61  -------------------LACYCVVEPVLRLVMGISLFDMDEETDFPPFEV 82

[Close]
BLAST of Cp4.1LG15g02890 vs. NCBI nr
Match: gi|659089773|ref|XP_008445683.1| (PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member 2-like [Cucumis melo])

HSP 1 Score: 177.6 bits (449), Expect = 1.8e-41
Identity = 88/112 (78.57%), Postives = 92/112 (82.14%), Query Frame = 1 

Query: 1   MGIELFVWYCRPVFGGVWTNAVDNAFGAYTPCAIDSLVVVISHLLVLGLCIYRIWLMKKS 60
           M  + F WYCRPV GGVWTNAVDNAFGAYTPCAIDSLVVVISHL+VLGLCIYRIWL+ K 
Sbjct: 1   MAFKPFFWYCRPVVGGVWTNAVDNAFGAYTPCAIDSLVVVISHLVVLGLCIYRIWLINKD 60

Query: 61  SAVQRFCLKSKIYNYVLCLLAGYCTSVLLFKLIMGISVLNLDGQAALGPYEV 113
             VQRFCLKS  YNYVLCLLA  C    L KLIMGISVLNLDGQ AL P+EV
Sbjct: 61  FKVQRFCLKSGTYNYVLCLLATCCAFEPLLKLIMGISVLNLDGQTALAPFEV 112

[Close]
BLAST of Cp4.1LG15g02890 vs. NCBI nr
Match: gi|778710155|ref|XP_011656526.1| (PREDICTED: ABC transporter C family member 2-like [Cucumis sativus])

HSP 1 Score: 176.8 bits (447), Expect = 3.0e-41
Identity = 88/112 (78.57%), Postives = 92/112 (82.14%), Query Frame = 1 

Query: 1   MGIELFVWYCRPVFGGVWTNAVDNAFGAYTPCAIDSLVVVISHLLVLGLCIYRIWLMKKS 60
           M  + F WYCRPV GGVW NAVDNAFGAYTPCAIDSLVVVISHL+VLGLCIYRIWL+KK 
Sbjct: 1   MAFKPFFWYCRPVAGGVWRNAVDNAFGAYTPCAIDSLVVVISHLVVLGLCIYRIWLIKKD 60

Query: 61  SAVQRFCLKSKIYNYVLCLLAGYCTSVLLFKLIMGISVLNLDGQAALGPYEV 113
             VQRFCLKS  YNYVLCLLA  C    L KLIMGISVLNLDGQ AL P+EV
Sbjct: 61  FKVQRFCLKSGTYNYVLCLLATCCAFEPLLKLIMGISVLNLDGQTALAPFEV 112

[Close]
BLAST of Cp4.1LG15g02890 vs. NCBI nr
Match: gi|700190772|gb|KGN45976.1| (hypothetical protein Csa_6G040635 [Cucumis sativus])

HSP 1 Score: 176.8 bits (447), Expect = 3.0e-41
Identity = 88/112 (78.57%), Postives = 92/112 (82.14%), Query Frame = 1 

Query: 1   MGIELFVWYCRPVFGGVWTNAVDNAFGAYTPCAIDSLVVVISHLLVLGLCIYRIWLMKKS 60
           M  + F WYCRPV GGVW NAVDNAFGAYTPCAIDSLVVVISHL+VLGLCIYRIWL+KK 
Sbjct: 1   MAFKPFFWYCRPVAGGVWRNAVDNAFGAYTPCAIDSLVVVISHLVVLGLCIYRIWLIKKD 60

Query: 61  SAVQRFCLKSKIYNYVLCLLAGYCTSVLLFKLIMGISVLNLDGQAALGPYEV 113
             VQRFCLKS  YNYVLCLLA  C    L KLIMGISVLNLDGQ AL P+EV
Sbjct: 61  FKVQRFCLKSGTYNYVLCLLATCCAFEPLLKLIMGISVLNLDGQTALAPFEV 112

[Close]
BLAST of Cp4.1LG15g02890 vs. NCBI nr
Match: gi|657961227|ref|XP_008372211.1| (PREDICTED: ABC transporter C family member 2-like [Malus domestica])

HSP 1 Score: 173.3 bits (438), Expect = 3.3e-40
Identity = 82/112 (73.21%), Postives = 94/112 (83.93%), Query Frame = 1 

Query: 1   MGIELFVWYCRPVFGGVWTNAVDNAFGAYTPCAIDSLVVVISHLLVLGLCIYRIWLMKKS 60
           MG +L  WYCRPV GGVWT AV+NAFGAYTPC +DSLVV ISHL+VLGLCIYRIW +KK 
Sbjct: 1   MGFQLLDWYCRPVPGGVWTRAVENAFGAYTPCTVDSLVVCISHLVVLGLCIYRIWRIKKD 60

Query: 61  SAVQRFCLKSKIYNYVLCLLAGYCTSVLLFKLIMGISVLNLDGQAALGPYEV 113
             VQRFCL+SK+YNY+L LLA YCT+  +F+LIMGISVLNLDGQ  L P+EV
Sbjct: 61  FKVQRFCLQSKVYNYMLGLLAAYCTAEPVFRLIMGISVLNLDGQTGLAPFEV 112

[Close]
BLAST of Cp4.1LG15g02890 vs. NCBI nr
Match: gi|657982755|ref|XP_008383428.1| (PREDICTED: ABC transporter C family member 2 [Malus domestica])

HSP 1 Score: 172.6 bits (436), Expect = 5.7e-40
Identity = 83/112 (74.11%), Postives = 93/112 (83.04%), Query Frame = 1 

Query: 1   MGIELFVWYCRPVFGGVWTNAVDNAFGAYTPCAIDSLVVVISHLLVLGLCIYRIWLMKKS 60
           MG E   WYCRPV GGVWT AV+NAFGAYTPCA+DSLVV ISHL+VLGLCIYRIW +KK 
Sbjct: 1   MGFEPLDWYCRPVPGGVWTRAVENAFGAYTPCAVDSLVVCISHLVVLGLCIYRIWRIKKD 60

Query: 61  SAVQRFCLKSKIYNYVLCLLAGYCTSVLLFKLIMGISVLNLDGQAALGPYEV 113
              QRFCL+SK+YNY+L LLA YCT+  LF+LIMGISVLNLDGQ  L P+EV
Sbjct: 61  FKAQRFCLQSKVYNYMLGLLAAYCTAEPLFRLIMGISVLNLDGQIGLAPFEV 112

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g02890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AB2C_ARATH2.2e-3161.26ABC transporter C family member 2 OS=Arabidopsis thaliana GN=ABCC2 PE=1 SV=2[more]
AB1C_ARATH6.3e-3159.65ABC transporter C family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=1[more]
AB12C_ARATH8.5e-2851.79ABC transporter C family member 12 OS=Arabidopsis thaliana GN=ABCC12 PE=2 SV=1[more]
AB11C_ARATH1.1e-2244.64ABC transporter C family member 11 OS=Arabidopsis thaliana GN=ABCC11 PE=2 SV=2[more]
BLAST of Cp4.1LG15g02890 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDY1_CUCSA2.1e-4178.57Uncharacterized protein OS=Cucumis sativus GN=Csa_6G040635 PE=4 SV=1[more]
A0A0A0KKT9_CUCSA1.1e-3972.32Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525360 PE=4 SV=1[more]
W9STG2_9ROSA9.7e-3972.32Uncharacterized protein OS=Morus notabilis GN=L484_009932 PE=4 SV=1[more]
M5X2K5_PRUPE9.7e-3971.43Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000145mg PE=4 SV=1[more]
A0A067ERV0_CITSI2.4e-3767.26Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043487mg PE=4 SV=1[more]
BLAST of Cp4.1LG15g02890 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G34660.11.2e-3261.26 multidrug resistance-associated protein 2[more]
AT1G30400.13.5e-3259.65 multidrug resistance-associated protein 1[more]
AT1G30420.16.0e-2444.64 multidrug resistance-associated protein 12[more]
AT1G30410.17.1e-1740.18 multidrug resistance-associated protein 13[more]
BLAST of Cp4.1LG15g02890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659089773|ref|XP_008445683.1|1.8e-4178.57PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member 2-like [Cucumis ... [more]
gi|778710155|ref|XP_011656526.1|3.0e-4178.57PREDICTED: ABC transporter C family member 2-like [Cucumis sativus][more]
gi|700190772|gb|KGN45976.1|3.0e-4178.57hypothetical protein Csa_6G040635 [Cucumis sativus][more]
gi|657961227|ref|XP_008372211.1|3.3e-4073.21PREDICTED: ABC transporter C family member 2-like [Malus domestica][more]
gi|657982755|ref|XP_008383428.1|5.7e-4074.11PREDICTED: ABC transporter C family member 2 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0005524 ATP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g02890.1Cp4.1LG15g02890.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR24223FAMILY NOT NAMEDcoord: 10..112
score: 2.3
NoneNo IPR availablePANTHERPTHR24223:SF251ABC TRANSPORTER C FAMILY MEMBER 11-RELATEDcoord: 10..112
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g02890Cla009465Watermelon (97103) v1cpewmB245
Cp4.1LG15g02890Lsi05G008790Bottle gourd (USVL1VR-Ls)cpelsiB215
Cp4.1LG15g02890Bhi05G000487Wax gourdcpewgoB0325
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG15g02890Cucumber (Gy14) v1cgycpeB0820
Cp4.1LG15g02890Cucurbita maxima (Rimu)cmacpeB524
Cp4.1LG15g02890Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g02890Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g02890Cucumber (Chinese Long) v2cpecuB246
Cp4.1LG15g02890Melon (DHL92) v3.5.1cpemeB230
Cp4.1LG15g02890Cucumber (Gy14) v2cgybcpeB339
Cp4.1LG15g02890Melon (DHL92) v3.6.1cpemedB269
Cp4.1LG15g02890Cucumber (Chinese Long) v3cpecucB0306