Cp4.1LG15g02810 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG15g02810
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ubiquitin carboxyl-terminal hydrolase family protein
Location	Cp4.1LG15 : 3082472 .. 3083539 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGACCGAAGAGGAAAATATATTATAGAGTTGATGAACTTGACAAAGTTATGGAGTTGCAGAAAAAGCCGTCCCTTATACTGAAGCTTATAAACATTATCCAATCTCAAAAGCACAAGTTTATATTCTTGAGGGACTTGGAGAAAGAAGTGGGATTTGTCCAAAAATGGAATTTCATGGCTGTTATTGAGAAGTACTCTTCGATTTTTTATGTTGATTCTGGAAGCTGTAGAAGGCCCTATGTTAGGCTCACCAATAAAGCTGAAAAGATTGCTAGTGAAGAACATAAGGTTAAGAGTGCAATGGAACCAATTGTAGTTAAGAATTTGAGGAAGCTGTTGATGCTGTCGGTTGACTGTCGAGTACCGCTCGAAAATATAGAGTTCATCGCGTCTGAATTGGGTTTGCCTTGTGACTTCAAAACTTCATTGATTCCTGAGTACCCTGAATTCTTTTCAGTGAAGGAAGTTGATGGGAAAGCCCACCTACATTTGGAGAATTGGGATTCTTCGCTTGCAATCAGTGCTCGGGAGGAAGGTTTCGGTAGAGCCAGAGATGTGTCTTCTTGTGAGAATCGAAAAAGAGTTCGAATATCGAAGGATGGCAACTTTTCTGGTCCATTTGCATTCAAGATGTGTTTTCCTCCAGGCTTTAGGCCAAACATGAGTTACCTTGAACATCTTGAAAGGTGGCAGAAAATGGATTTTCCTTCTCCATACTTGAACGCGAGGAGATTTGACGCAGCTGATCCGAAGGCAAGAAAGAGAGTCGTTGCTGTTCTTCACGAGTTTCTAAGCTTGACAATGGAAAAAAGGATGAGATCAACACAATTGGATGCATTTCATAGGGAGTTTCTTCTTCCATCAAAACTATTGCTGTGCTTGTTAAAGCATCAAGGAATCTTCTACATCACTAATAAAGGTGCAAGGAGTACAGTACTTCTGAAAGAAGCCTATGAAGGTTCAGTTTTGAGTGATAAATGCCCCTTGCTGTTGCACTATGATAGATTCCTTTCACTCTGTGGTAGGAGGGACAAGAATTGCAATTCACCCCAGGTTCGTTTCTAG

mRNA sequence

ATGAGACCGAAGAGGAAAATATATTATAGAGTTGATGAACTTGACAAAGTTATGGAGTTGCAGAAAAAGCCGTCCCTTATACTGAAGCTTATAAACATTATCCAATCTCAAAAGCACAAGTTTATATTCTTGAGGGACTTGGAGAAAGAAGTGGGATTTGTCCAAAAATGGAATTTCATGGCTGTTATTGAGAAGTACTCTTCGATTTTTTATGTTGATTCTGGAAGCTGTAGAAGGCCCTATGTTAGGCTCACCAATAAAGCTGAAAAGATTGCTAGTGAAGAACATAAGGTTAAGAGTGCAATGGAACCAATTGTAGTTAAGAATTTGAGGAAGCTGTTGATGCTGTCGGTTGACTGTCGAGTACCGCTCGAAAATATAGAGTTCATCGCGTCTGAATTGGGTTTGCCTTGTGACTTCAAAACTTCATTGATTCCTGAGTACCCTGAATTCTTTTCAGTGAAGGAAGTTGATGGGAAAGCCCACCTACATTTGGAGAATTGGGATTCTTCGCTTGCAATCAGTGCTCGGGAGGAAGGTTTCGGTAGAGCCAGAGATGTGTCTTCTTGTGAGAATCGAAAAAGAGTTCGAATATCGAAGGATGGCAACTTTTCTGGTCCATTTGCATTCAAGATGTGTTTTCCTCCAGGCTTTAGGCCAAACATGAGTTACCTTGAACATCTTGAAAGGTGGCAGAAAATGGATTTTCCTTCTCCATACTTGAACGCGAGGAGATTTGACGCAGCTGATCCGAAGGCAAGAAAGAGAGTCGTTGCTGTTCTTCACGAGTTTCTAAGCTTGACAATGGAAAAAAGGATGAGATCAACACAATTGGATGCATTTCATAGGGAGTTTCTTCTTCCATCAAAACTATTGCTGTGCTTGTTAAAGCATCAAGGAATCTTCTACATCACTAATAAAGGTGCAAGGAGTACAGTACTTCTGAAAGAAGCCTATGAAGGTTCAGTTTTGAGTGATAAATGCCCCTTGCTGTTGCACTATGATAGATTCCTTTCACTCTGTGGTAGGAGGGACAAGAATTGCAATTCACCCCAGGTTCGTTTCTAG

Coding sequence (CDS)

ATGAGACCGAAGAGGAAAATATATTATAGAGTTGATGAACTTGACAAAGTTATGGAGTTGCAGAAAAAGCCGTCCCTTATACTGAAGCTTATAAACATTATCCAATCTCAAAAGCACAAGTTTATATTCTTGAGGGACTTGGAGAAAGAAGTGGGATTTGTCCAAAAATGGAATTTCATGGCTGTTATTGAGAAGTACTCTTCGATTTTTTATGTTGATTCTGGAAGCTGTAGAAGGCCCTATGTTAGGCTCACCAATAAAGCTGAAAAGATTGCTAGTGAAGAACATAAGGTTAAGAGTGCAATGGAACCAATTGTAGTTAAGAATTTGAGGAAGCTGTTGATGCTGTCGGTTGACTGTCGAGTACCGCTCGAAAATATAGAGTTCATCGCGTCTGAATTGGGTTTGCCTTGTGACTTCAAAACTTCATTGATTCCTGAGTACCCTGAATTCTTTTCAGTGAAGGAAGTTGATGGGAAAGCCCACCTACATTTGGAGAATTGGGATTCTTCGCTTGCAATCAGTGCTCGGGAGGAAGGTTTCGGTAGAGCCAGAGATGTGTCTTCTTGTGAGAATCGAAAAAGAGTTCGAATATCGAAGGATGGCAACTTTTCTGGTCCATTTGCATTCAAGATGTGTTTTCCTCCAGGCTTTAGGCCAAACATGAGTTACCTTGAACATCTTGAAAGGTGGCAGAAAATGGATTTTCCTTCTCCATACTTGAACGCGAGGAGATTTGACGCAGCTGATCCGAAGGCAAGAAAGAGAGTCGTTGCTGTTCTTCACGAGTTTCTAAGCTTGACAATGGAAAAAAGGATGAGATCAACACAATTGGATGCATTTCATAGGGAGTTTCTTCTTCCATCAAAACTATTGCTGTGCTTGTTAAAGCATCAAGGAATCTTCTACATCACTAATAAAGGTGCAAGGAGTACAGTACTTCTGAAAGAAGCCTATGAAGGTTCAGTTTTGAGTGATAAATGCCCCTTGCTGTTGCACTATGATAGATTCCTTTCACTCTGTGGTAGGAGGGACAAGAATTGCAATTCACCCCAGGTTCGTTTCTAG

Protein sequence

MRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIASEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQVRF

Homology

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BLAST of Cp4.1LG15g02810 vs. Swiss-Prot
Match: RPD1_ARATH (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.8e-31
Identity = 115/354 (32.49%), Postives = 180/354 (50.85%), Query Frame = 1


Query: 3   PKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFI---FLRDLEKEVGFVQKWNF 62
           PK++   R    D  ME++KK   ++K  ++I SQ +  I    L  L + +G   K + 
Sbjct: 41  PKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHE 100

Query: 63  M-AVIEKYSSIFYVDSGSCRRP-YVRLTNKAEKIASEEHKVKSAMEPIVVKNLRKLLMLS 122
             A + K+  +F +     +R  Y RLT KA      EH+      P  V  LRKL+M+S
Sbjct: 101 PGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMS 160

Query: 123 VDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGK----AHLHLENWDSSLA 182
              R+ LE++    +E GLP DF+ S+I ++P+FF +  +DG+     ++ +   D +L+
Sbjct: 161 NTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRL--IDGEETRDKYIEIVEKDPNLS 220

Query: 183 ISAREEGFGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQK 242
           I A E    R R++   E R +   ++D  FS    F + FPPGF+    +   + +WQ+
Sbjct: 221 ICAIE----RVREI---EYRTKGIDAEDVRFS----FVVNFPPGFKIGKYFRIAVWKWQR 280

Query: 243 MDFPSPYLNARRFD----AADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPS 302
           + + SPY +   +D     A  +  KR VA +HE LSLT+EK++   ++  F     LP 
Sbjct: 281 LPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPK 340

Query: 303 KLLLCLLKHQGIFYIT---NKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSL 341
           KL   LL+HQGIFYI+   N G   TV L+E Y+   L +   + L   R   L
Sbjct: 341 KLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAEL 381

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BLAST of Cp4.1LG15g02810 vs. TrEMBL
Match: A0A0A0LVT2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G164710 PE=4 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 9.1e-178
Identity = 318/354 (89.83%), Postives = 329/354 (92.94%), Query Frame = 1


Query: 1   MRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDLEKEVGFVQKWNFM 60
           MRPKRKIYYRV ELDKVM+LQKKPSLILKLINIIQSQK+KFI LRDLEKEVGFVQKWNFM
Sbjct: 45  MRPKRKIYYRVAELDKVMDLQKKPSLILKLINIIQSQKNKFILLRDLEKEVGFVQKWNFM 104

Query: 61  AVIEKYSSIFYVDSGSCR-RPYVRLTNKAEKIASEEHKVKSAMEPIVVKNLRKLLMLSVD 120
           AVIEKYSSIFYV SGS R  PYVRL+NKAE IASEE KVKSAMEPI+VKNLRKLLMLSVD
Sbjct: 105 AVIEKYSSIFYVGSGSSRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVD 164

Query: 121 CRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREE 180
           CRVPLENIEFIASELGLPCDFKTSLIP+YPEFFSVKEVDGKAHLHLENWDSSLAI ARE+
Sbjct: 165 CRVPLENIEFIASELGLPCDFKTSLIPKYPEFFSVKEVDGKAHLHLENWDSSLAICARED 224

Query: 181 GFGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSP 240
            F +ARD+SSC   KRVRISKDGNFSGPFAFKMCFP GFRPN SYLEHLERWQKMDFPSP
Sbjct: 225 RFAKARDLSSCGYGKRVRISKDGNFSGPFAFKMCFPSGFRPNTSYLEHLERWQKMDFPSP 284

Query: 241 YLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQ 300
           YLNARRFD ADPK RKRVVAVLHEFLSLTMEKRM STQLDAFHREFLLPSKLLLCL+KHQ
Sbjct: 285 YLNARRFDVADPKTRKRVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQ 344

Query: 301 GIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQV 354
           GIFYITNKGARSTV LKE YEGS+L DKCPLLLH DRFLSLCGRRD +CNS QV
Sbjct: 345 GIFYITNKGARSTVFLKEGYEGSILVDKCPLLLHSDRFLSLCGRRDMSCNSHQV 398

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BLAST of Cp4.1LG15g02810 vs. TrEMBL
Match: M5WG21_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007448mg PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 4.4e-140
Identity = 254/346 (73.41%), Postives = 286/346 (82.66%), Query Frame = 1


Query: 2   RPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDLEKEVGFVQKWNFMA 61
           RPKRK+Y+RV ELDKVM+ QKKP+LIL+L +IIQSQKH+ + LRDLEKEVGFVQKWNFMA
Sbjct: 14  RPKRKVYHRVHELDKVMDFQKKPALILQLKSIIQSQKHQSLLLRDLEKEVGFVQKWNFMA 73

Query: 62  VIEKYSSIFYVDSGSCRRPYVRLTNKAEKIASEEHKVKSAMEPIVVKNLRKLLMLSVDCR 121
            IEKY SIFYV  G+   P+V L  KA+K+A EE + K  MEPI+VKNLRKLLMLSVDCR
Sbjct: 74  AIEKYPSIFYVGGGNRTPPFVTLAEKAKKVAREEAEAKDLMEPILVKNLRKLLMLSVDCR 133

Query: 122 VPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGF 181
           VPLENIEFI SELGLP DFK SL+P+YPE FSVKEV+GK HLHLENWDSS+A++AREE  
Sbjct: 134 VPLENIEFIESELGLPNDFKKSLLPKYPEIFSVKEVNGKLHLHLENWDSSIAVTAREEQL 193

Query: 182 GRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYL 241
           G     +      +VRISKDGNF GP AF+M FP GFRPN SYLE LERWQKMDFPSPYL
Sbjct: 194 GGEGISAPSGLGNKVRISKDGNFLGPHAFRMSFPAGFRPNTSYLEQLERWQKMDFPSPYL 253

Query: 242 NARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGI 301
           NARRFD ADPK RKRVVAVLHE LSLTM+KRM S QLDAFH E+ LPSKLLLCL+KH GI
Sbjct: 254 NARRFDIADPKVRKRVVAVLHELLSLTMQKRMTSAQLDAFHSEYFLPSKLLLCLIKHPGI 313

Query: 302 FYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKN 348
           FYITNKGARSTV LKEAY+G  L +KCPLLL  D+F++L GRR+ N
Sbjct: 314 FYITNKGARSTVFLKEAYDGLNLINKCPLLLFNDKFVALSGRREIN 359

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BLAST of Cp4.1LG15g02810 vs. TrEMBL
Match: A0A067JMI5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22647 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 7.5e-140
Identity = 259/356 (72.75%), Postives = 301/356 (84.55%), Query Frame = 1


Query: 2   RPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDLEKEVGFVQKWNFMA 61
           RPK+KIY+RV ELD+VM+LQKKPSLIL L +IIQSQKH+ + LRDLEK+VGFVQKWNFMA
Sbjct: 14  RPKKKIYHRVHELDRVMDLQKKPSLILHLKSIIQSQKHQCLLLRDLEKQVGFVQKWNFMA 73

Query: 62  VIEKYSSIFYVDSGSCRRP-YVRLTNKAEKIASEEHKVKSAMEPIVVKNLRKLLMLSVDC 121
           V+EKY SIF V  GS R P +V LT KA KIA++EH+ + +MEPI+V+NLRKLLM+SVDC
Sbjct: 74  VLEKYPSIFRVGGGSDRTPPFVTLTEKAIKIANQEHEARESMEPILVRNLRKLLMMSVDC 133

Query: 122 RVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEG 181
           RVPLE IEFI +ELGLP  FK SLIP+YPE+FSVK V+GKA+LHLENWDSSLAI+AREE 
Sbjct: 134 RVPLEKIEFIGNELGLPQGFKNSLIPKYPEYFSVKNVNGKAYLHLENWDSSLAITAREER 193

Query: 182 FGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPY 241
                  +S   +K+VRISKDGNF GPFAF+M FP GFRPN SYLE LERWQ+++FPSPY
Sbjct: 194 LSLEGVSASNPPKKKVRISKDGNFLGPFAFRMRFPAGFRPNASYLEELERWQRLEFPSPY 253

Query: 242 LNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQG 301
           LNARRFDAADPKARKRVVAVLHE LSLT+EKRM S QLDAFH E LLPS+LLLCL+K+ G
Sbjct: 254 LNARRFDAADPKARKRVVAVLHELLSLTIEKRMTSLQLDAFHSESLLPSRLLLCLVKNPG 313

Query: 302 IFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKN-CNSPQVRF 356
           IFYITNKGARSTV LKEAY+GS L DKCPLLL  D+F++L GRR+ N CN  ++RF
Sbjct: 314 IFYITNKGARSTVFLKEAYDGSNLIDKCPLLLFNDKFVALSGRRESNFCN--EMRF 367

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BLAST of Cp4.1LG15g02810 vs. TrEMBL
Match: V4T294_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020719mg PE=4 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 6.0e-137
Identity = 252/350 (72.00%), Postives = 294/350 (84.00%), Query Frame = 1


Query: 2   RPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDLEKEVGFVQKWNFMA 61
           R K+KIY RV ELD+VMELQKKPSLIL+L +IIQSQK K + LRDLEK+VGFV KWNFMA
Sbjct: 14  RSKKKIYRRVHELDRVMELQKKPSLILQLKSIIQSQKQKCL-LRDLEKQVGFVHKWNFMA 73

Query: 62  VIEKYSSIFYVDSGSCRRP-YVRLTNKAEKIASEEHKVKSAMEPIVVKNLRKLLMLSVDC 121
           VIEKY SIF+V  GS R+P +V LT KAEKIA EE   +  MEPI+VKNLRKLLM+SVDC
Sbjct: 74  VIEKYPSIFHVGGGSNRKPPFVTLTQKAEKIADEEEVARELMEPILVKNLRKLLMMSVDC 133

Query: 122 RVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEG 181
           RVPLE IEFI SELGLP DFK + +P+Y +FF+VK+ +GK +L+L+NWD+SLA++AREE 
Sbjct: 134 RVPLEKIEFIESELGLPQDFKKAFLPKYDDFFTVKDTNGKPYLYLQNWDASLAVTAREER 193

Query: 182 FGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPY 241
             R   + S   +KRVRI+KDGN+SGP AFK+CFP GFRPN SYLE LERWQ+M+FPSPY
Sbjct: 194 LAREGVLDSAGAQKRVRITKDGNYSGPNAFKICFPAGFRPNTSYLEQLERWQRMEFPSPY 253

Query: 242 LNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQG 301
           LNARRF+ ADPKARKRVVAVLHE LSLTMEKRM S QLDAFH E++LP KLLLCL+KH G
Sbjct: 254 LNARRFELADPKARKRVVAVLHELLSLTMEKRMTSAQLDAFHSEYMLPHKLLLCLIKHHG 313

Query: 302 IFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKN-CN 350
           IFYITNKGARSTVLLKEAY+GS L DKCPLLL+ D+F++L GRR+ N CN
Sbjct: 314 IFYITNKGARSTVLLKEAYDGSNLIDKCPLLLYNDKFVALSGRREINSCN 362

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BLAST of Cp4.1LG15g02810 vs. TrEMBL
Match: F6HJ48_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0087g00260 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 7.8e-137
Identity = 246/349 (70.49%), Postives = 295/349 (84.53%), Query Frame = 1


Query: 2   RPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDLEKEVGFVQKWNFMA 61
           RPK+KIY+RV ELD+VM+L+KKP LIL+L +IIQSQKH+ + LRDLEK+VGFV KWNFMA
Sbjct: 25  RPKKKIYHRVHELDRVMDLKKKPCLILQLKSIIQSQKHQSLLLRDLEKQVGFVHKWNFMA 84

Query: 62  VIEKYSSIFYVDSGSCRRPYVRLTNKAEKIASEEHKVKSAMEPIVVKNLRKLLMLSVDCR 121
           VIEKY SIF V+ G+   P V LT KA++IA EE + +  MEPI+V+NLRKLLM+SVDCR
Sbjct: 85  VIEKYPSIFRVNGGNRTPPSVELTEKAKRIADEETEARKQMEPILVENLRKLLMMSVDCR 144

Query: 122 VPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGF 181
           VPLENIEFI SELGLP DFK +LIP+YPEFFSVK+ +G+A+L LENWDSSLA++ARE+ F
Sbjct: 145 VPLENIEFIESELGLPQDFKETLIPKYPEFFSVKDFNGRAYLQLENWDSSLAVTAREKRF 204

Query: 182 GRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYL 241
            R R + S  + ++ R+SKDGNFSGP+AF M +P GFRPNMSYLE ++RWQKM+FPSPYL
Sbjct: 205 ARERVLDSVGHARKARVSKDGNFSGPYAFLMSYPAGFRPNMSYLEEVQRWQKMEFPSPYL 264

Query: 242 NARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGI 301
           NARRF+AADPKARKRVVAVLHE LSLTMEKRM S QLDAFH EFLLP++LLLCL+KH GI
Sbjct: 265 NARRFEAADPKARKRVVAVLHELLSLTMEKRMTSAQLDAFHSEFLLPARLLLCLIKHHGI 324

Query: 302 FYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKN-CN 350
           FYITNKGARSTV LKEAY+GS L +K PLL   ++F++L GRR+   CN
Sbjct: 325 FYITNKGARSTVFLKEAYDGSNLIEKSPLLGFNNKFVALSGRRESTLCN 373

[Close]

BLAST of Cp4.1LG15g02810 vs. TAIR10
Match: AT1G79120.1 (AT1G79120.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 483.4 bits (1243), Expect = 1.2e-136
Identity = 238/349 (68.19%), Postives = 286/349 (81.95%), Query Frame = 1


Query: 2   RPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDLEKEVGFVQKWNFMA 61
           RPK+K+Y+RV +LDK ++L KKPSLIL+L +IIQ+QKH  + LRDLEK VGFV KWN MA
Sbjct: 56  RPKQKVYHRVHDLDKAIDLNKKPSLILQLKSIIQAQKHGSLLLRDLEKHVGFVHKWNLMA 115

Query: 62  VIEKYSSIFYVDSGSCRRPYVRLTNKAEKIASEEHKVKSAMEPIVVKNLRKLLMLSVDCR 121
            IEKY +IFYV  G    P+V LT KA+KIA+EE +   +MEPI+V NLRKLLM+SVDCR
Sbjct: 116 AIEKYPTIFYVGGGHKEPPFVMLTEKAKKIAAEESEATESMEPILVNNLRKLLMMSVDCR 175

Query: 122 VPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGF 181
           VPLE +EFI S +GLP DFK++LIP+Y EFFS+K ++GK +L LENWDSSLAI+ARE+  
Sbjct: 176 VPLEKVEFIQSAMGLPQDFKSTLIPKYTEFFSLKVINGKVNLVLENWDSSLAITAREDRL 235

Query: 182 GRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYL 241
            R     S  +RKRVRI+KDGNF G  AFK+ FPPGFRPN SYLE  E+WQKM+FPSPYL
Sbjct: 236 SREGFSESVGDRKRVRITKDGNFLGRNAFKISFPPGFRPNASYLEEFEKWQKMEFPSPYL 295

Query: 242 NARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGI 301
           NARRFDAADPKARKRVVAVLHE LSLTMEKR+   QLDAFH E+LLPS+L+LCL+KHQGI
Sbjct: 296 NARRFDAADPKARKRVVAVLHELLSLTMEKRVTCAQLDAFHSEYLLPSRLILCLIKHQGI 355

Query: 302 FYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNS 351
           FYITNKGAR TV LK+AY GS L +KCPLLL +DRF++LCGR++ N ++
Sbjct: 356 FYITNKGARGTVFLKDAYAGSNLIEKCPLLLFHDRFVALCGRKEVNLSN 404

[Close]

BLAST of Cp4.1LG15g02810 vs. TAIR10
Match: AT5G21970.1 (AT5G21970.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 174.9 bits (442), Expect = 9.0e-44
Identity = 109/342 (31.87%), Postives = 178/342 (52.05%), Query Frame = 1


Query: 10  RVDELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDLE---KEVGFVQKWNFMAVIEKY 69
           RV EL+   E  K  S ++ L+ +++ ++   + +R  E   +++   +       I K 
Sbjct: 57  RVQELEIATEKWKIASKVIFLMEVLKGERDMIMTVRSFEQYRRQINLPKPHKISDFIRKS 116

Query: 70  SSIFYVDSGSCRRPYVRLTNKAEKIASEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLEN 129
             +F +        +  LT   E +  E  K+         +++ + LM+SVD ++PL+ 
Sbjct: 117 PKLFELYKDQRGVLWCGLTEGGEDLLDEHDKLLEENGDKAAEHVTRCLMMSVDKKLPLDK 176

Query: 130 IEFIASELGLPCDFKTSLIPEYPEFFSVKEV-DGKAHLHLENWDSSLAISAREEG-FGRA 189
           I     + GLP DF+ + +  +P+ F V ++ DG+ +L L +W+ + AI+  E+   G  
Sbjct: 177 IVHFRRDFGLPLDFRINWVYNFPQHFKVVKLGDGEEYLELVSWNPAWAITELEKKTLGIT 236

Query: 190 RDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNAR 249
            D   CE+       K G  S   AF M FPP ++    Y   +E +QK  + SPY +AR
Sbjct: 237 ED---CEH-------KPGMLS--LAFPMKFPPSYKKMYRYRGKIEHFQKRSYLSPYADAR 296

Query: 250 RFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGIFYI 309
             +A   +  KR +AV+HE LS T+EKR+ +  L  F REF++P KL+   LKH GIFY+
Sbjct: 297 GLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIFLKHCGIFYV 356

Query: 310 TNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDK 347
           + +G R +V L E YEG  L +KCPL+L  ++ L   G R +
Sbjct: 357 SERGKRFSVFLTEGYEGPELIEKCPLILWKEKLLKFTGYRGR 386

[Close]

BLAST of Cp4.1LG15g02810 vs. TAIR10
Match: AT4G01037.1 (AT4G01037.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 170.6 bits (431), Expect = 1.7e-42
Identity = 108/346 (31.21%), Postives = 181/346 (52.31%), Query Frame = 1


Query: 1   MRPKRKIYYRVDEL--DKVMELQKKPSLILKLINIIQSQKHKFIFLRDLEK---EVGFVQ 60
           + P R    R  EL  D V++  KK  L+L +  I+ SQ  + + LR L K   ++G  +
Sbjct: 69  VEPVRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKK 128

Query: 61  KWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIASEEHKVKSAMEPIVVKNLRKLLM 120
           +  F+A++ KY  +F +          ++T++AE++  +E ++++ +E ++V  LRKL+M
Sbjct: 129 RRRFIALLRKYPGVFEIVEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVM 188

Query: 121 LSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAIS 180
           +S+D R+ LE I  + ++LGLP +F+ ++   YP++F V        L L +WD  LA+S
Sbjct: 189 MSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWDPELAVS 248

Query: 181 AREEGFGRARDVSSCENRKRVRISKDGNFSGPFAF-KMCFPPGFRPNMSYLEHLERWQKM 240
           A E        +S  +NR R    ++     P  F ++  P G   + S    + +++ M
Sbjct: 249 AAE--------LSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDM 308

Query: 241 DFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLC 300
            + SPY +     +   +  K    V+HE LSLT EKR     L  F  EF    +L   
Sbjct: 309 QYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGM 368

Query: 301 LLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSL 341
           L++H  +FY++ KG R +V L+EAY  S L DK PL L  ++  +L
Sbjct: 369 LIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRAL 406

[Close]

BLAST of Cp4.1LG15g02810 vs. TAIR10
Match: AT5G48040.1 (AT5G48040.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 140.6 bits (353), Expect = 1.9e-33
Identity = 101/339 (29.79%), Postives = 164/339 (48.38%), Query Frame = 1


Query: 13  ELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDL---EKEVGFVQKWNFMAVIEKYSSI 72
           ELD V+  +K    +  L+++I +     + +  L     ++G  Q+    A I +Y +I
Sbjct: 44  ELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQLGLPQELKLSAFIRRYPNI 103

Query: 73  F----YVDSGSCRRPYVRLTNKAEKIASEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLE 132
           F    Y DS     P   LT +   +  EE  V    E  V+  L KLLML+ +  + L 
Sbjct: 104 FVEHCYWDSAGTSVPCFGLTRETIDLYYEEVDVSRVNERDVLVRLCKLLMLTCERTLSLH 163

Query: 133 NIEFIASELGLPCDFKTSLIPEYPEFFSV----KEVDGKAHLHLENWDSSLAISAREEGF 192
           +I+ +  +LGLP D++ SLI ++P+ FS+     ++DG   L L +WD  LA+S      
Sbjct: 164 SIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDG---LKLIHWDEHLAVS------ 223

Query: 193 GRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYL 252
                        ++++ +D       AF + F  GF      +E L+ WQ++ + SPY+
Sbjct: 224 -------------QMQLREDVGNDERMAFPVKFTRGFGLKRKSIEWLQEWQRLPYTSPYV 283

Query: 253 NARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGI 312
           +A   D     + KR V V HE L LT+ K+     +    + F LP K      +H GI
Sbjct: 284 DASHLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKVFERHPGI 343

Query: 313 FYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSL 341
           FYI+ K    TV+L+EAY+   L +K PL+   ++F ++
Sbjct: 344 FYISMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANM 360

[Close]

BLAST of Cp4.1LG15g02810 vs. TAIR10
Match: AT4G33495.1 (AT4G33495.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 136.7 bits (343), Expect = 2.7e-32
Identity = 115/354 (32.49%), Postives = 180/354 (50.85%), Query Frame = 1


Query: 3   PKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFI---FLRDLEKEVGFVQKWNF 62
           PK++   R    D  ME++KK   ++K  ++I SQ +  I    L  L + +G   K + 
Sbjct: 41  PKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHE 100

Query: 63  M-AVIEKYSSIFYVDSGSCRRP-YVRLTNKAEKIASEEHKVKSAMEPIVVKNLRKLLMLS 122
             A + K+  +F +     +R  Y RLT KA      EH+      P  V  LRKL+M+S
Sbjct: 101 PGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMS 160

Query: 123 VDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGK----AHLHLENWDSSLA 182
              R+ LE++    +E GLP DF+ S+I ++P+FF +  +DG+     ++ +   D +L+
Sbjct: 161 NTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRL--IDGEETRDKYIEIVEKDPNLS 220

Query: 183 ISAREEGFGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQK 242
           I A E    R R++   E R +   ++D  FS    F + FPPGF+    +   + +WQ+
Sbjct: 221 ICAIE----RVREI---EYRTKGIDAEDVRFS----FVVNFPPGFKIGKYFRIAVWKWQR 280

Query: 243 MDFPSPYLNARRFD----AADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPS 302
           + + SPY +   +D     A  +  KR VA +HE LSLT+EK++   ++  F     LP 
Sbjct: 281 LPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPK 340

Query: 303 KLLLCLLKHQGIFYIT---NKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSL 341
           KL   LL+HQGIFYI+   N G   TV L+E Y+   L +   + L   R   L
Sbjct: 341 KLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAEL 381

[Close]

BLAST of Cp4.1LG15g02810 vs. NCBI nr
Match: gi|659071667|ref|XP_008461321.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 634.0 bits (1634), Expect = 1.5e-178
Identity = 317/354 (89.55%), Postives = 330/354 (93.22%), Query Frame = 1


Query: 1   MRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDLEKEVGFVQKWNFM 60
           MRPKRKIYYRV ELDKVM+LQKKPSLILKLINIIQSQKHKFI LRDLEKEVGFVQKWNFM
Sbjct: 45  MRPKRKIYYRVAELDKVMDLQKKPSLILKLINIIQSQKHKFILLRDLEKEVGFVQKWNFM 104

Query: 61  AVIEKYSSIFYVDSGSCR-RPYVRLTNKAEKIASEEHKVKSAMEPIVVKNLRKLLMLSVD 120
           AVIEKYSSIFYV SGS R  PYVRL+NKAE IASEE KVKSAMEPI+VKNLRKLLMLSVD
Sbjct: 105 AVIEKYSSIFYVGSGSSRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVD 164

Query: 121 CRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREE 180
           CRVPLENIEFIASELGLPCDFKTSLIP+YPEFFSVKE DGKAHL+LENWDSSLA+ ARE+
Sbjct: 165 CRVPLENIEFIASELGLPCDFKTSLIPKYPEFFSVKEADGKAHLNLENWDSSLAVCARED 224

Query: 181 GFGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSP 240
           GFG+ARD+SSC + KRVRISKDGNF GPFAFKMCFPPGFRPN SYLEHLERWQKMDFPSP
Sbjct: 225 GFGKARDLSSCGSGKRVRISKDGNFCGPFAFKMCFPPGFRPNTSYLEHLERWQKMDFPSP 284

Query: 241 YLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQ 300
           YLNARRFD ADPK RKRVVAVLHEFLSLTMEKRM STQLDAFHREFLLPSKLLLCL+KHQ
Sbjct: 285 YLNARRFDVADPKTRKRVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQ 344

Query: 301 GIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQV 354
           GIFYITNKGARSTV LKE YEGS L DKCPLLLH DRFLSLCGRRD +CN+ QV
Sbjct: 345 GIFYITNKGARSTVFLKEGYEGSTLVDKCPLLLHSDRFLSLCGRRDVSCNTHQV 398

[Close]

BLAST of Cp4.1LG15g02810 vs. NCBI nr
Match: gi|449443632|ref|XP_004139581.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus])

HSP 1 Score: 630.9 bits (1626), Expect = 1.3e-177
Identity = 318/354 (89.83%), Postives = 329/354 (92.94%), Query Frame = 1


Query: 1   MRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDLEKEVGFVQKWNFM 60
           MRPKRKIYYRV ELDKVM+LQKKPSLILKLINIIQSQK+KFI LRDLEKEVGFVQKWNFM
Sbjct: 45  MRPKRKIYYRVAELDKVMDLQKKPSLILKLINIIQSQKNKFILLRDLEKEVGFVQKWNFM 104

Query: 61  AVIEKYSSIFYVDSGSCR-RPYVRLTNKAEKIASEEHKVKSAMEPIVVKNLRKLLMLSVD 120
           AVIEKYSSIFYV SGS R  PYVRL+NKAE IASEE KVKSAMEPI+VKNLRKLLMLSVD
Sbjct: 105 AVIEKYSSIFYVGSGSSRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVD 164

Query: 121 CRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREE 180
           CRVPLENIEFIASELGLPCDFKTSLIP+YPEFFSVKEVDGKAHLHLENWDSSLAI ARE+
Sbjct: 165 CRVPLENIEFIASELGLPCDFKTSLIPKYPEFFSVKEVDGKAHLHLENWDSSLAICARED 224

Query: 181 GFGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSP 240
            F +ARD+SSC   KRVRISKDGNFSGPFAFKMCFP GFRPN SYLEHLERWQKMDFPSP
Sbjct: 225 RFAKARDLSSCGYGKRVRISKDGNFSGPFAFKMCFPSGFRPNTSYLEHLERWQKMDFPSP 284

Query: 241 YLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQ 300
           YLNARRFD ADPK RKRVVAVLHEFLSLTMEKRM STQLDAFHREFLLPSKLLLCL+KHQ
Sbjct: 285 YLNARRFDVADPKTRKRVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQ 344

Query: 301 GIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQV 354
           GIFYITNKGARSTV LKE YEGS+L DKCPLLLH DRFLSLCGRRD +CNS QV
Sbjct: 345 GIFYITNKGARSTVFLKEGYEGSILVDKCPLLLHSDRFLSLCGRRDMSCNSHQV 398

[Close]

BLAST of Cp4.1LG15g02810 vs. NCBI nr
Match: gi|595862784|ref|XP_007211465.1| (hypothetical protein PRUPE_ppa007448mg [Prunus persica])

HSP 1 Score: 505.8 bits (1301), Expect = 6.3e-140
Identity = 254/346 (73.41%), Postives = 286/346 (82.66%), Query Frame = 1


Query: 2   RPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDLEKEVGFVQKWNFMA 61
           RPKRK+Y+RV ELDKVM+ QKKP+LIL+L +IIQSQKH+ + LRDLEKEVGFVQKWNFMA
Sbjct: 14  RPKRKVYHRVHELDKVMDFQKKPALILQLKSIIQSQKHQSLLLRDLEKEVGFVQKWNFMA 73

Query: 62  VIEKYSSIFYVDSGSCRRPYVRLTNKAEKIASEEHKVKSAMEPIVVKNLRKLLMLSVDCR 121
            IEKY SIFYV  G+   P+V L  KA+K+A EE + K  MEPI+VKNLRKLLMLSVDCR
Sbjct: 74  AIEKYPSIFYVGGGNRTPPFVTLAEKAKKVAREEAEAKDLMEPILVKNLRKLLMLSVDCR 133

Query: 122 VPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGF 181
           VPLENIEFI SELGLP DFK SL+P+YPE FSVKEV+GK HLHLENWDSS+A++AREE  
Sbjct: 134 VPLENIEFIESELGLPNDFKKSLLPKYPEIFSVKEVNGKLHLHLENWDSSIAVTAREEQL 193

Query: 182 GRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYL 241
           G     +      +VRISKDGNF GP AF+M FP GFRPN SYLE LERWQKMDFPSPYL
Sbjct: 194 GGEGISAPSGLGNKVRISKDGNFLGPHAFRMSFPAGFRPNTSYLEQLERWQKMDFPSPYL 253

Query: 242 NARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGI 301
           NARRFD ADPK RKRVVAVLHE LSLTM+KRM S QLDAFH E+ LPSKLLLCL+KH GI
Sbjct: 254 NARRFDIADPKVRKRVVAVLHELLSLTMQKRMTSAQLDAFHSEYFLPSKLLLCLIKHPGI 313

Query: 302 FYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKN 348
           FYITNKGARSTV LKEAY+G  L +KCPLLL  D+F++L GRR+ N
Sbjct: 314 FYITNKGARSTVFLKEAYDGLNLINKCPLLLFNDKFVALSGRREIN 359

[Close]

BLAST of Cp4.1LG15g02810 vs. NCBI nr
Match: gi|643711605|gb|KDP25112.1| (hypothetical protein JCGZ_22647 [Jatropha curcas])

HSP 1 Score: 505.0 bits (1299), Expect = 1.1e-139
Identity = 259/356 (72.75%), Postives = 301/356 (84.55%), Query Frame = 1


Query: 2   RPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDLEKEVGFVQKWNFMA 61
           RPK+KIY+RV ELD+VM+LQKKPSLIL L +IIQSQKH+ + LRDLEK+VGFVQKWNFMA
Sbjct: 14  RPKKKIYHRVHELDRVMDLQKKPSLILHLKSIIQSQKHQCLLLRDLEKQVGFVQKWNFMA 73

Query: 62  VIEKYSSIFYVDSGSCRRP-YVRLTNKAEKIASEEHKVKSAMEPIVVKNLRKLLMLSVDC 121
           V+EKY SIF V  GS R P +V LT KA KIA++EH+ + +MEPI+V+NLRKLLM+SVDC
Sbjct: 74  VLEKYPSIFRVGGGSDRTPPFVTLTEKAIKIANQEHEARESMEPILVRNLRKLLMMSVDC 133

Query: 122 RVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEG 181
           RVPLE IEFI +ELGLP  FK SLIP+YPE+FSVK V+GKA+LHLENWDSSLAI+AREE 
Sbjct: 134 RVPLEKIEFIGNELGLPQGFKNSLIPKYPEYFSVKNVNGKAYLHLENWDSSLAITAREER 193

Query: 182 FGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPY 241
                  +S   +K+VRISKDGNF GPFAF+M FP GFRPN SYLE LERWQ+++FPSPY
Sbjct: 194 LSLEGVSASNPPKKKVRISKDGNFLGPFAFRMRFPAGFRPNASYLEELERWQRLEFPSPY 253

Query: 242 LNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQG 301
           LNARRFDAADPKARKRVVAVLHE LSLT+EKRM S QLDAFH E LLPS+LLLCL+K+ G
Sbjct: 254 LNARRFDAADPKARKRVVAVLHELLSLTIEKRMTSLQLDAFHSESLLPSRLLLCLVKNPG 313

Query: 302 IFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKN-CNSPQVRF 356
           IFYITNKGARSTV LKEAY+GS L DKCPLLL  D+F++L GRR+ N CN  ++RF
Sbjct: 314 IFYITNKGARSTVFLKEAYDGSNLIDKCPLLLFNDKFVALSGRRESNFCN--EMRF 367

[Close]

BLAST of Cp4.1LG15g02810 vs. NCBI nr
Match: gi|802743301|ref|XP_012087404.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Jatropha curcas])

HSP 1 Score: 505.0 bits (1299), Expect = 1.1e-139
Identity = 259/356 (72.75%), Postives = 301/356 (84.55%), Query Frame = 1


Query: 2   RPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDLEKEVGFVQKWNFMA 61
           RPK+KIY+RV ELD+VM+LQKKPSLIL L +IIQSQKH+ + LRDLEK+VGFVQKWNFMA
Sbjct: 45  RPKKKIYHRVHELDRVMDLQKKPSLILHLKSIIQSQKHQCLLLRDLEKQVGFVQKWNFMA 104

Query: 62  VIEKYSSIFYVDSGSCRRP-YVRLTNKAEKIASEEHKVKSAMEPIVVKNLRKLLMLSVDC 121
           V+EKY SIF V  GS R P +V LT KA KIA++EH+ + +MEPI+V+NLRKLLM+SVDC
Sbjct: 105 VLEKYPSIFRVGGGSDRTPPFVTLTEKAIKIANQEHEARESMEPILVRNLRKLLMMSVDC 164

Query: 122 RVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEG 181
           RVPLE IEFI +ELGLP  FK SLIP+YPE+FSVK V+GKA+LHLENWDSSLAI+AREE 
Sbjct: 165 RVPLEKIEFIGNELGLPQGFKNSLIPKYPEYFSVKNVNGKAYLHLENWDSSLAITAREER 224

Query: 182 FGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPY 241
                  +S   +K+VRISKDGNF GPFAF+M FP GFRPN SYLE LERWQ+++FPSPY
Sbjct: 225 LSLEGVSASNPPKKKVRISKDGNFLGPFAFRMRFPAGFRPNASYLEELERWQRLEFPSPY 284

Query: 242 LNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQG 301
           LNARRFDAADPKARKRVVAVLHE LSLT+EKRM S QLDAFH E LLPS+LLLCL+K+ G
Sbjct: 285 LNARRFDAADPKARKRVVAVLHELLSLTIEKRMTSLQLDAFHSESLLPSRLLLCLVKNPG 344

Query: 302 IFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKN-CNSPQVRF 356
           IFYITNKGARSTV LKEAY+GS L DKCPLLL  D+F++L GRR+ N CN  ++RF
Sbjct: 345 IFYITNKGARSTVFLKEAYDGSNLIDKCPLLLFNDKFVALSGRRESNFCN--EMRF 398

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g02810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RPD1_ARATH	4.8e-31	32.49	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1	[more]

BLAST of Cp4.1LG15g02810 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVT2_CUCSA	9.1e-178	89.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G164710 PE=4 SV=1	[more]
M5WG21_PRUPE	4.4e-140	73.41	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007448mg PE=4 SV=1	[more]
A0A067JMI5_JATCU	7.5e-140	72.75	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22647 PE=4 SV=1	[more]
V4T294_9ROSI	6.0e-137	72.00	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020719mg PE=4 SV=1	[more]
F6HJ48_VITVI	7.8e-137	70.49	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0087g00260 PE=4 SV=...	[more]

BLAST of Cp4.1LG15g02810 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G79120.1	1.2e-136	68.19	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G21970.1	9.0e-44	31.87	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G01037.1	1.7e-42	31.21	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G48040.1	1.9e-33	29.79	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G33495.1	2.7e-32	32.49	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

BLAST of Cp4.1LG15g02810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659071667\|ref\|XP_008461321.1\|	1.5e-178	89.55	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo]	[more]
gi\|449443632\|ref\|XP_004139581.1\|	1.3e-177	89.83	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus]	[more]
gi\|595862784\|ref\|XP_007211465.1\|	6.3e-140	73.41	hypothetical protein PRUPE_ppa007448mg [Prunus persica]	[more]
gi\|643711605\|gb\|KDP25112.1\|	1.1e-139	72.75	hypothetical protein JCGZ_22647 [Jatropha curcas]	[more]
gi\|802743301\|ref\|XP_012087404.1\|	1.1e-139	72.75	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021099	PORR_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g02810.1	Cp4.1LG15g02810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 10..344 score: 9.8E
None	No IPR available	PANTHER	PTHR31476	FAMILY NOT NAMED	coord: 2..352 score: 5.0E
None	No IPR available	PANTHER	PTHR31476:SF11	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN	coord: 2..352 score: 5.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG15g02810	CmoCh19G003550	Cucurbita moschata (Rifu)	cmocpeB481

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG15g02810	Cucurbita maxima (Rimu)	cmacpeB522
Cp4.1LG15g02810	Bottle gourd (USVL1VR-Ls)	cpelsiB206