Cp4.1LG15g02610 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG15g02610
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ankyrin-kinase, putative
Location	Cp4.1LG15 : 2505055 .. 2506192 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGATATGGATTTTGAGGTATGCTGATATATACAATGCCATAAAATCCAGATTGATTGAGGAATGCTGGGATCCAGAACCTGTTATGAGGCCTACTTTCTCTGAAATTATTGTAAGGTTGGATAAAATAGTTGCCAACTGCTCAAAACATGGATGGTGGAAGGACACATTTAAACTTCCCTGGTTTGTTCTTTTCCCTATAAAATGCTTCTCATGTCATTTCCTTTTTTCTTGGCAATCATTTTTTGTTCTAAAGTTCACAATTTGGAATGAAAATGTGAGACCTCACGTCAGTTGGAGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTTATTCTAGCCGATGCGTTTTAAAAATCTTGAGGGGAAGCCCGAAAGGGAAAGTCCAAAGAGGACAATATCTGCTAGCGATTGGTTTGGGCCGTCCCAAATGGTATCAGAGCTAGACATCGGACGATGTGTCAGCGGAAGGCTGAGCCCTGAAGGAGGGTGGACACGAGATGGTGTACCAATGAGGATGCTGGGTCCTGAAGGGAGTGGATTGTGAGATCCCACATTGGTTGGAGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACTTCTTCCTAGTAAACGCATTTTAAGAACCTTGAGGGGAAGCCCAAAAGGAAAATCTCAAAGAGGACAGTATCTGCTAGGGGTAGGTTTGGGTCGTTATAGGAAAACTAGAAAAGTAGAACGGAATTCCATCAATGAACTCGGTTTTAACTTTCAACTTCAACCAAATAAGTTCATTGAAATCATCTCTGTGGGAAGTAAGCTGTAGTGTGCAAAACATATGCATAAGAACAAAGTTTTGGATTGTGTGCAGGAAATAAGAAGGTAGAGGAACTCAACTCACTGTCTTCAGAAGTGGGCAAAGTGATAATGAATGAAGAACAATTCTCATAACATAGAGAGAGCTTCATTGTTGAGATTATTGAGAACACCATTAATGTTATCAAAGCTTTTCTGTTTCTTCTTAAATTATGTCTCATTCATTTTCAATTTGTATTGTCTCAATGGATTGGAGGGGTTCCTGTGTAAAATGTGTGCAAAAGCATTATTGTTTCTTTTCTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTT

mRNA sequence

ATGTTGATATGGATTTTGAGGTATGCTGATATATACAATGCCATAAAATCCAGATTGATTGAGGAATGCTGGGATCCAGAACCTGTTATGAGGCCTACTTTCTCTGAAATTATTGTAAGGTTGGATAAAATAGTTGCCAACTGCTCAAAACATGGATGGTGGAAGGACACATTTAAACTTCCCTGGTTTGTTCTTTTCCCTATAAAATGCTTCTCATGAAATAAGAAGGTAGAGGAACTCAACTCACTGTCTTCAGAAGTGGGCAAAGTGATAATGAATGAAGAACAATTCTCATAACATAGAGAGAGCTTCATTGTTGAGATTATTGAGAACACCATTAATGTTATCAAAGCTTTTCTGTTTCTTCTTAAATTATGTCTCATTCATTTTCAATTTGTATTGTCTCAATGGATTGGAGGGGTTCCTGTGTAAAATGTGTGCAAAAGCATTATTGTTTCTTTTCTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGTTGATATGGATTTTGAGGTATGCTGATATATACAATGCCATAAAATCCAGATTGATTGAGGAATGCTGGGATCCAGAACCTGTTATGAGGCCTACTTTCTCTGAAATTATTGTAAGGTTGGATAAAATAGTTGCCAACTGCTCAAAACATGGATGGTGGAAGGACACATTTAAACTTCCCTGGTTTGTTCTTTTCCCTATAAAATGCTTCTCATGA

Protein sequence

MLIWILRYADIYNAIKSRLIEECWDPEPVMRPTFSEIIVRLDKIVANCSKHGWWKDTFKLPWFVLFPIKCFS

Homology

[Close]

BLAST of Cp4.1LG15g02610 vs. Swiss-Prot
Match: SHKC_DICDI (Dual specificity protein kinase shkC OS=Dictyostelium discoideum GN=shkC PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 3.2e-06
Identity = 23/62 (37.10%), Postives = 35/62 (56.45%), Query Frame = 1


Query: 18  RLIEECWDPEPVMRPTFSEIIVRLDKI-----VANCSKHGWWKDTF----KLPWFVLFPI 71
           RLIE+CWD EP+ RP+F EII  LD +     +++ +   +WK +F    ++PW      
Sbjct: 256 RLIEKCWDKEPISRPSFKEIISALDHVIIDAAISDLNGRDFWKKSFLTEQEVPWEAFIDA 315

[Close]

BLAST of Cp4.1LG15g02610 vs. TrEMBL
Match: A0A0A0K3V6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G051390 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.3e-19
Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 1


Query: 19  LIEECWDPEPVMRPTFSEIIVRLDKIVANCSKHGWWKDTFKLPW 63
           LIEECWDPEPVMRPTFSEIIVRLDKIVANCSK GWWKDTFKLPW
Sbjct: 429 LIEECWDPEPVMRPTFSEIIVRLDKIVANCSKQGWWKDTFKLPW 472

[Close]

BLAST of Cp4.1LG15g02610 vs. TrEMBL
Match: A0A151UBX4_CAJCA (Dual specificity protein kinase pyk1 OS=Cajanus cajan GN=KK1_021084 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 5.1e-19
Identity = 40/46 (86.96%), Postives = 45/46 (97.83%), Query Frame = 1


Query: 19  LIEECWDPEPVMRPTFSEIIVRLDKIVANCSKHGWWKDTFKLPWFV 65
           LIEECWDP+PV+RPTFS++IVRLDKIVANCSK GWWKDTFKLPW+V
Sbjct: 432 LIEECWDPQPVVRPTFSQVIVRLDKIVANCSKQGWWKDTFKLPWYV 477

[Close]

BLAST of Cp4.1LG15g02610 vs. TrEMBL
Match: M5VPL0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005127mg PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 8.7e-19
Identity = 41/51 (80.39%), Postives = 44/51 (86.27%), Query Frame = 1


Query: 12  YNAIKSRLIEECWDPEPVMRPTFSEIIVRLDKIVANCSKHGWWKDTFKLPW 63
           Y  +   LIEECWDP+PV+RP FSEIIVRLDKIVANCSK GWWKDTFKLPW
Sbjct: 425 YPPVLKELIEECWDPKPVVRPIFSEIIVRLDKIVANCSKQGWWKDTFKLPW 475

[Close]

BLAST of Cp4.1LG15g02610 vs. TrEMBL
Match: W9RF61_9ROSA (Dual specificity protein kinase shkC OS=Morus notabilis GN=L484_020365 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 8.7e-19
Identity = 41/44 (93.18%), Postives = 43/44 (97.73%), Query Frame = 1


Query: 19  LIEECWDPEPVMRPTFSEIIVRLDKIVANCSKHGWWKDTFKLPW 63
           LIEECWDPEPV+RPTFSEIIVRLDKIV+NCSK GWWKDTFKLPW
Sbjct: 435 LIEECWDPEPVVRPTFSEIIVRLDKIVSNCSKQGWWKDTFKLPW 478

[Close]

BLAST of Cp4.1LG15g02610 vs. TrEMBL
Match: A0A059AZL1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01867 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.3e-18
Identity = 40/45 (88.89%), Postives = 43/45 (95.56%), Query Frame = 1


Query: 19  LIEECWDPEPVMRPTFSEIIVRLDKIVANCSKHGWWKDTFKLPWF 64
           LIEECWDPE V+RPTFSEIIVRLDKIVANCS+ GWWKDTFKLPW+
Sbjct: 407 LIEECWDPESVVRPTFSEIIVRLDKIVANCSRQGWWKDTFKLPWY 451

[Close]

BLAST of Cp4.1LG15g02610 vs. TAIR10
Match: AT2G43850.1 (AT2G43850.1 Integrin-linked protein kinase family)

HSP 1 Score: 89.7 bits (221), Expect = 7.7e-19
Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = 1


Query: 19  LIEECWDPEPVMRPTFSEIIVRLDKIVANCSKHGWWKDTFKLPW 63
           LIE+CW PE  +RPTFSEII+RLDKIVANCSK GWWKDTFK PW
Sbjct: 435 LIEKCWHPEAGIRPTFSEIIIRLDKIVANCSKQGWWKDTFKFPW 478

[Close]

BLAST of Cp4.1LG15g02610 vs. TAIR10
Match: AT3G59830.1 (AT3G59830.1 Integrin-linked protein kinase family)

HSP 1 Score: 87.0 bits (214), Expect = 5.0e-18
Identity = 35/44 (79.55%), Postives = 37/44 (84.09%), Query Frame = 1


Query: 19  LIEECWDPEPVMRPTFSEIIVRLDKIVANCSKHGWWKDTFKLPW 63
           LIEECW PE  +RP FSEII+RLDKIV NCSK GWWKDTFK PW
Sbjct: 433 LIEECWHPEISVRPIFSEIIIRLDKIVTNCSKQGWWKDTFKFPW 476

[Close]

BLAST of Cp4.1LG15g02610 vs. TAIR10
Match: AT2G31800.1 (AT2G31800.1 Integrin-linked protein kinase family)

HSP 1 Score: 86.7 bits (213), Expect = 6.6e-18
Identity = 35/44 (79.55%), Postives = 37/44 (84.09%), Query Frame = 1


Query: 19  LIEECWDPEPVMRPTFSEIIVRLDKIVANCSKHGWWKDTFKLPW 63
           LIEECWD E  +RPTFSEIIVRLDKI  +CSK GWWKDTFK PW
Sbjct: 432 LIEECWDTETFVRPTFSEIIVRLDKIFVHCSKQGWWKDTFKFPW 475

[Close]

BLAST of Cp4.1LG15g02610 vs. NCBI nr
Match: gi|449438147|ref|XP_004136851.1| (PREDICTED: dual specificity protein kinase shkC-like [Cucumis sativus])

HSP 1 Score: 103.2 bits (256), Expect = 1.9e-19
Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 1


Query: 19  LIEECWDPEPVMRPTFSEIIVRLDKIVANCSKHGWWKDTFKLPW 63
           LIEECWDPEPVMRPTFSEIIVRLDKIVANCSK GWWKDTFKLPW
Sbjct: 429 LIEECWDPEPVMRPTFSEIIVRLDKIVANCSKQGWWKDTFKLPW 472

[Close]

BLAST of Cp4.1LG15g02610 vs. NCBI nr
Match: gi|659110529|ref|XP_008455272.1| (PREDICTED: serine/threonine-protein kinase TNNI3K-like isoform X2 [Cucumis melo])

HSP 1 Score: 103.2 bits (256), Expect = 1.9e-19
Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 1


Query: 19  LIEECWDPEPVMRPTFSEIIVRLDKIVANCSKHGWWKDTFKLPW 63
           LIEECWDPEPVMRPTFSEIIVRLDKIVANCSK GWWKDTFKLPW
Sbjct: 429 LIEECWDPEPVMRPTFSEIIVRLDKIVANCSKQGWWKDTFKLPW 472

[Close]

BLAST of Cp4.1LG15g02610 vs. NCBI nr
Match: gi|659110527|ref|XP_008455271.1| (PREDICTED: serine/threonine-protein kinase TNNI3K-like isoform X1 [Cucumis melo])

HSP 1 Score: 103.2 bits (256), Expect = 1.9e-19
Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 1


Query: 19  LIEECWDPEPVMRPTFSEIIVRLDKIVANCSKHGWWKDTFKLPW 63
           LIEECWDPEPVMRPTFSEIIVRLDKIVANCSK GWWKDTFKLPW
Sbjct: 429 LIEECWDPEPVMRPTFSEIIVRLDKIVANCSKQGWWKDTFKLPW 472

[Close]

BLAST of Cp4.1LG15g02610 vs. NCBI nr
Match: gi|694380183|ref|XP_009366238.1| (PREDICTED: dual specificity protein kinase shkC-like [Pyrus x bretschneideri])

HSP 1 Score: 102.4 bits (254), Expect = 3.3e-19
Identity = 42/51 (82.35%), Postives = 44/51 (86.27%), Query Frame = 1


Query: 12  YNAIKSRLIEECWDPEPVMRPTFSEIIVRLDKIVANCSKHGWWKDTFKLPW 63
           Y  +   LIEECWDPEPVMRP FSEIIVRLD+IVANCSK GWWKDTFKLPW
Sbjct: 427 YPPVVKELIEECWDPEPVMRPIFSEIIVRLDRIVANCSKQGWWKDTFKLPW 477

[Close]

BLAST of Cp4.1LG15g02610 vs. NCBI nr
Match: gi|657946288|ref|XP_008384025.1| (PREDICTED: dual specificity protein kinase shkC-like [Malus domestica])

HSP 1 Score: 102.4 bits (254), Expect = 3.3e-19
Identity = 42/51 (82.35%), Postives = 44/51 (86.27%), Query Frame = 1


Query: 12  YNAIKSRLIEECWDPEPVMRPTFSEIIVRLDKIVANCSKHGWWKDTFKLPW 63
           Y  +   LIEECWDPEPVMRP FSEIIVRLD+IVANCSK GWWKDTFKLPW
Sbjct: 427 YPPVLKELIEECWDPEPVMRPIFSEIIVRLDRIVANCSKQGWWKDTFKLPW 477

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g02610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SHKC_DICDI	3.2e-06	37.10	Dual specificity protein kinase shkC OS=Dictyostelium discoideum GN=shkC PE=3 SV...	[more]

BLAST of Cp4.1LG15g02610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3V6_CUCSA	1.3e-19	97.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G051390 PE=4 SV=1	[more]
A0A151UBX4_CAJCA	5.1e-19	86.96	Dual specificity protein kinase pyk1 OS=Cajanus cajan GN=KK1_021084 PE=4 SV=1	[more]
M5VPL0_PRUPE	8.7e-19	80.39	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005127mg PE=4 SV=1	[more]
W9RF61_9ROSA	8.7e-19	93.18	Dual specificity protein kinase shkC OS=Morus notabilis GN=L484_020365 PE=4 SV=1	[more]
A0A059AZL1_EUCGR	4.3e-18	88.89	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01867 PE=4 SV=1	[more]

BLAST of Cp4.1LG15g02610 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G43850.1	7.7e-19	81.82	Integrin-linked protein kinase family	[more]
AT3G59830.1	5.0e-18	79.55	Integrin-linked protein kinase family	[more]
AT2G31800.1	6.6e-18	79.55	Integrin-linked protein kinase family	[more]

BLAST of Cp4.1LG15g02610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438147\|ref\|XP_004136851.1\|	1.9e-19	97.73	PREDICTED: dual specificity protein kinase shkC-like [Cucumis sativus]	[more]
gi\|659110529\|ref\|XP_008455272.1\|	1.9e-19	97.73	PREDICTED: serine/threonine-protein kinase TNNI3K-like isoform X2 [Cucumis melo]	[more]
gi\|659110527\|ref\|XP_008455271.1\|	1.9e-19	97.73	PREDICTED: serine/threonine-protein kinase TNNI3K-like isoform X1 [Cucumis melo]	[more]
gi\|694380183\|ref\|XP_009366238.1\|	3.3e-19	82.35	PREDICTED: dual specificity protein kinase shkC-like [Pyrus x bretschneideri]	[more]
gi\|657946288\|ref\|XP_008384025.1\|	3.3e-19	82.35	PREDICTED: dual specificity protein kinase shkC-like [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000186	activation of MAPKK activity
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway
cellular_component	GO:0005622	intracellular
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004709	MAP kinase kinase kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g02610.1	Cp4.1LG15g02610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23257	SERINE-THREONINE PROTEIN KINASE	coord: 19..62 score: 1.5
None	No IPR available	PANTHER	PTHR23257:SF378	INTEGRIN-LINKED PROTEIN KINASE FAMILY PROTEIN-RELATED	coord: 19..62 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG15g02610	Silver-seed gourd	carcpeB0919
Cp4.1LG15g02610	Silver-seed gourd	carcpeB1034
Cp4.1LG15g02610	Cucumber (Chinese Long) v3	cpecucB0318
Cp4.1LG15g02610	Wax gourd	cpewgoB0329
Cp4.1LG15g02610	Cucurbita pepo (Zucchini)	cpecpeB268
Cp4.1LG15g02610	Cucumber (Gy14) v1	cgycpeB0903
Cp4.1LG15g02610	Cucurbita maxima (Rimu)	cmacpeB120
Cp4.1LG15g02610	Cucurbita maxima (Rimu)	cmacpeB522
Cp4.1LG15g02610	Cucurbita moschata (Rifu)	cmocpeB094
Cp4.1LG15g02610	Cucurbita moschata (Rifu)	cmocpeB481
Cp4.1LG15g02610	Bottle gourd (USVL1VR-Ls)	cpelsiB206
Cp4.1LG15g02610	Watermelon (Charleston Gray)	cpewcgB219
Cp4.1LG15g02610	Watermelon (97103) v1	cpewmB239
Cp4.1LG15g02610	Melon (DHL92) v3.5.1	cpemeB217
Cp4.1LG15g02610	Cucumber (Gy14) v2	cgybcpeB752
Cp4.1LG15g02610	Melon (DHL92) v3.6.1	cpemedB279