Cp4.1LG15g01920 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGAGTTTGGAATACAATTTGTGGAGTGGAGCCACTGAAAATGATAGGACGAAGGAGGAAATTGCGAAGAACTGACCACATCCACAATGAAAAACAACCATCAAATTTCAAAGGCCTTTGTTCAATTGAAAGGCCTTATTTAAGGCTTCCAAGACATGCCAATCTCTGTATTGCGTATTGAATTTTCTGCGAATATTCTGTTTCTTTCTCCCTCTCTCAAGGAGTGACCCTAAAGGAAAGAAGATTGTTGTTAAAACAGATTTCAATTTCGTTTCTCTTTCTCTTTCTTCATCCTTTCCTCTGGGTTTTCTGTTTGTTTCCCGAGAAAACAACGGAAAGTGAAAAAGGGGATCAGGGAAAATCCTTGAGGAAAATGGAGAAGAAAGGGGAAAAGAATGTGGGCGAAAATATGAGCAAATTTCAATTGAGTTTTTGGGATTTGGCTGTGTTTAGCACCGTTGTTATTGCCTTCCTTTTTGGCCTTCTTTGTGTTTACCTAACCATGCCGGCCTCCGATTATAGCTTTCTTAAGCTTCCTCGCAACCTTCAAGATCTTCAAATCCTCAGGTAGTTCTTCTGTTCATTGCGTTTTCTTTCGATTTTGATGATGGATTTTTTCGTTTCGTTCGTTTTCTGGATTCTTTTTATGGTTTGATCGCTTGATTAGGTCATTTTTCTTGTGATTTCTGGAATTGGGTTTGCCTGAGTTCTTGTTCTTGATGTGATTAGCTAACCTTTCAATGGCTTGCTCTTGAATGATTTGATTGTCTTTTGAATGGGCACTAAATACTTTTGTTAGGGAGTTTCAAATTCAAGTGTTTGTATCAGAAATATGATCAGATCTGGCACTTTCCTTGATACAGTTTTTGTGGGATTCTTATGGTTTTGGCTGATGAGATTTGGGCAGCACTTTCTTGAATGTTTGTGGATATGGTTTGTGTGCGATACACGTTGGTTGGAGAGGGGAACGAAGCATTCCTTTTAAGGATGAGGAAACCTCTCCCTAATAGATGCTTTTTAAAACTGTGAGGCTGATGGTGATACGTAACGGACCAAAGCTAATAATATCTGCTAGCGGCGGGTTTGGGCTGTTACAAATAGCATTAGAACCAGACATTGGGCCATGTGCCATCGAGGATGCTGGCCCCCCAAGGGAGATGGATTGTGTAACGGCCCAAATCCATAGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTCAAGGCTTTAAAATGCGTCTGCTAGGGGAAGGTTTCCACACATTTATAAAGGGTGGTTTGATCTCCTCTCCAACCGTGAAGGTTTCCACACCCTTATAAATGGTGGTTTGTTCTCCTCCCCAACCAATGTGAGACATCACAATCCACCATTGGTTGGGGAGGAGAACAAATCACCATTCATAAGGGTGTGGAAACCTTCCCCTAAAAGACGTGTTTTAAAGCCTTGAGGGGAAACCTGAAAGGGAAAGCCCAAAGATGACAATATCTATTAGTGGTGGATCTGGGCCGTTACAGATTGTGAGATCCCATATTGGTTGGAGAGGGTAACGAAGGATTCCTTACAAGTGTGGGGAAACCTCTCCTTAATAGACACGTTTTAAAACCGTGAGGCTGACGGCAATACGTAAGGACCCAAAACGGATAATATCTACTTAGCGGTGGGTTTGGGTTATTACTTATCTCGTCATCATAAATGTTGCTATGTAAAAGCTTGTGGATGGTTAAAATGTGGCTTGATGAATATTCTTTCTTTTAGAGATCACCTTGAGGAATATACAAGTGACTACACTGCACAGGTCTTAGTAGGATACTGCGTTGTATACATCTTTATGCAAACCTTCATGATACCTGGAACTGTTTTCATGTCACTGCTGGCTGGAGCCCTTTTCGGGGTCTTCAAGGGCGTTGCTCTCGTCGTCTTCACCGCTACAGCCGGAGCTTCCTCTTGCTATTTCCTCTCGAAGATGATCGGGAAGCCCCTCGCCTTTACTCTTTGGCCTGACAAGGTGAAGTTCTTTCAAGATCAGGTAAGTTTCATATCCCCATCTCTTTCGTAGTCGATTCTATAAGGTTTTTTCGATGTTGAATCGATTCCTCTCTCAGGTTTCTAGGAGAAGGGAAGGGCTGTTGAACTACATGCTTTTTCTAAGATTGACTCCTACCTTGCCAAATACGTTTATCAATGTTGCATCTCCGATCGTCGATGTGCCTTACCATACCTTCTTCTTTGCTACCGTCGTTGGTCTCATCCCGGCTGCCTACGTTACAGTCAAGGTAATCACTTCTCCATTTCCATTGTTTGTCTTTGTGTTGCTCGTAGCTCATTGTCATGGGTTTCTAGAGAGGGATGATCTGTGATCCGACATTGGTTAGATAGGGGAACGATCCCTTCCTTATTAGGGTGTAGAAACCTCTCCCTAGTAGACACGTTTTAAAAACTTCAGTGGGCTTGGCTTGTTACAAACGGTATTAGAGCCAGACATCGGCCTGTGTGCCAGCGGGACGCTAGCTCCCAAGAGGGGTGGATTGTAAGATCCTACACCGGTTGAAGAGGGAAAGGAAACATTCTTTATAAGGGTGTGGAAACCTGTCCCTAATTACATAGTTCGGAAATGCATTTAGAAGCATACTTGACATTCTTAGGTGAGTGAGTGAGTGAAGAACTAATGTTGATTTGGCTGTTTGCTTCTCAGCTCATATATTGATGTTTCTAAAGTGTATATTGAGTGACTCGAACATCTCGAATTGTATGACAGGCTGGGCTGACGCTCGGAGAATTACAATCGGTTGGTGATCTTTACGACTTCAACTCGATTGCCACATTGTTTCTGATCGGAATTGTGTCAGTGACCCCGACATTAGTTGGCAAGAGTAAAGCATAGGATCCTATGGCGTAACGCTTGAGCGAATTTGCAGCCTCGTTCCTTGTACAGGTATAGCGTAATCACCCGAACAAGCCATTGAAGGTGATTATGGATCTCGTTTGGTGTCGAACATAATGTGGATGTCGGGTTTGGAGGATTGGGAGAAGGGTCAGAGTTATTAAATTTGGATAATTGTATTTGATTGACCAGAAAAATGATAAAAGGAATGATCATATTCATTTGATTCCCCAGAAAATTATAAAATGGAAGATCATATTCATTTGTGAATATTTTGTTTATATTCTGGGAAATTTGTAATATCTTTTGAATATCCGATTTCTCGATCAAATGTAAATATCTTCATCTAG CGAGTTTGGAATACAATTTGTGGAGTGGAGCCACTGAAAATGATAGGACGAAGGAGGAAATTGCGAAGAACTGACCACATCCACAATGAAAAACAACCATCAAATTTCAAAGGCCTTTGTTCAATTGAAAGGCCTTATTTAAGGCTTCCAAGACATGCCAATCTCTGTATTGCGTATTGAATTTTCTGCGAATATTCTGTTTCTTTCTCCCTCTCTCAAGGAGTGACCCTAAAGGAAAGAAGATTGTTGTTAAAACAGATTTCAATTTCGTTTCTCTTTCTCTTTCTTCATCCTTTCCTCTGGGTTTTCTGTTTGTTTCCCGAGAAAACAACGGAAAGTGAAAAAGGGGATCAGGGAAAATCCTTGAGGAAAATGGAGAAGAAAGGGGAAAAGAATGTGGGCGAAAATATGAGCAAATTTCAATTGAGTTTTTGGGATTTGGCTGTGTTTAGCACCGTTGTTATTGCCTTCCTTTTTGGCCTTCTTTGTGTTTACCTAACCATGCCGGCCTCCGATTATAGCTTTCTTAAGCTTCCTCGCAACCTTCAAGATCTTCAAATCCTCAGAGATCACCTTGAGGAATATACAAGTGACTACACTGCACAGGTCTTAGTAGGATACTGCGTTGTATACATCTTTATGCAAACCTTCATGATACCTGGAACTGTTTTCATGTCACTGCTGGCTGGAGCCCTTTTCGGGGTCTTCAAGGGCGTTGCTCTCGTCGTCTTCACCGCTACAGCCGGAGCTTCCTCTTGCTATTTCCTCTCGAAGATGATCGGGAAGCCCCTCGCCTTTACTCTTTGGCCTGACAAGGTGAAGTTCTTTCAAGATCAGGTTTCTAGGAGAAGGGAAGGGCTGTTGAACTACATGCTTTTTCTAAGATTGACTCCTACCTTGCCAAATACGTTTATCAATGTTGCATCTCCGATCGTCGATGTGCCTTACCATACCTTCTTCTTTGCTACCGTCGTTGGTCTCATCCCGGCTGCCTACGTTACAGTCAAGGCTGGGCTGACGCTCGGAGAATTACAATCGGTTGGTGATCTTTACGACTTCAACTCGATTGCCACATTGTTTCTGATCGGAATTGTGTCAGTGACCCCGACATTAGTTGGCAAGAGTAAAGCATAGGATCCTATGGCGTAACGCTTGAGCGAATTTGCAGCCTCGTTCCTTGTACAGGTATAGCGTAATCACCCGAACAAGCCATTGAAGGTGATTATGGATCTCGTTTGGTGTCGAACATAATGTGGATGTCGGGTTTGGAGGATTGGGAGAAGGGTCAGAGTTATTAAATTTGGATAATTGTATTTGATTGACCAGAAAAATGATAAAAGGAATGATCATATTCATTTGATTCCCCAGAAAATTATAAAATGGAAGATCATATTCATTTGTGAATATTTTGTTTATATTCTGGGAAATTTGTAATATCTTTTGAATATCCGATTTCTCGATCAAATGTAAATATCTTCATCTAG ATGGAGAAGAAAGGGGAAAAGAATGTGGGCGAAAATATGAGCAAATTTCAATTGAGTTTTTGGGATTTGGCTGTGTTTAGCACCGTTGTTATTGCCTTCCTTTTTGGCCTTCTTTGTGTTTACCTAACCATGCCGGCCTCCGATTATAGCTTTCTTAAGCTTCCTCGCAACCTTCAAGATCTTCAAATCCTCAGAGATCACCTTGAGGAATATACAAGTGACTACACTGCACAGGTCTTAGTAGGATACTGCGTTGTATACATCTTTATGCAAACCTTCATGATACCTGGAACTGTTTTCATGTCACTGCTGGCTGGAGCCCTTTTCGGGGTCTTCAAGGGCGTTGCTCTCGTCGTCTTCACCGCTACAGCCGGAGCTTCCTCTTGCTATTTCCTCTCGAAGATGATCGGGAAGCCCCTCGCCTTTACTCTTTGGCCTGACAAGGTGAAGTTCTTTCAAGATCAGGTTTCTAGGAGAAGGGAAGGGCTGTTGAACTACATGCTTTTTCTAAGATTGACTCCTACCTTGCCAAATACGTTTATCAATGTTGCATCTCCGATCGTCGATGTGCCTTACCATACCTTCTTCTTTGCTACCGTCGTTGGTCTCATCCCGGCTGCCTACGTTACAGTCAAGGCTGGGCTGACGCTCGGAGAATTACAATCGGTTGGTGATCTTTACGACTTCAACTCGATTGCCACATTGTTTCTGATCGGAATTGTGTCAGTGACCCCGACATTAGTTGGCAAGAGTAAAGCATAG MEKKGEKNVGENMSKFQLSFWDLAVFSTVVIAFLFGLLCVYLTMPASDYSFLKLPRNLQDLQILRDHLEEYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYFLSKMIGKPLAFTLWPDKVKFFQDQVSRRREGLLNYMLFLRLTPTLPNTFINVASPIVDVPYHTFFFATVVGLIPAAYVTVKAGLTLGELQSVGDLYDFNSIATLFLIGIVSVTPTLVGKSKA
BLAST of Cp4.1LG15g01920 vs. Swiss-Prot
Match: Y4958_ARATH (Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana GN=At4g09580 PE=1 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 1.1e-82 Identity = 144/238 (60.50%), Postives = 195/238 (81.93%), Query Frame = 1
BLAST of Cp4.1LG15g01920 vs. Swiss-Prot
Match: TM41_DICDI (Transmembrane protein 41 homolog OS=Dictyostelium discoideum GN=DDB_G0275543 PE=3 SV=2) HSP 1 Score: 193.4 bits (490), Expect = 3.1e-48 Identity = 98/233 (42.06%), Postives = 152/233 (65.24%), Query Frame = 1
BLAST of Cp4.1LG15g01920 vs. Swiss-Prot
Match: TM41B_CHICK (Transmembrane protein 41B OS=Gallus gallus GN=TMEM41B PE=2 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.5e-39 Identity = 86/231 (37.23%), Postives = 138/231 (59.74%), Query Frame = 1
BLAST of Cp4.1LG15g01920 vs. Swiss-Prot
Match: TM41B_HUMAN (Transmembrane protein 41B OS=Homo sapiens GN=TMEM41B PE=1 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.5e-39 Identity = 86/231 (37.23%), Postives = 139/231 (60.17%), Query Frame = 1
BLAST of Cp4.1LG15g01920 vs. Swiss-Prot
Match: TM41B_XENLA (Transmembrane protein 41B OS=Xenopus laevis GN=tmem41b PE=2 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 2.6e-39 Identity = 79/199 (39.70%), Postives = 127/199 (63.82%), Query Frame = 1
BLAST of Cp4.1LG15g01920 vs. TrEMBL
Match: A0A0A0LI03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G901130 PE=4 SV=1) HSP 1 Score: 455.3 bits (1170), Expect = 4.9e-125 Identity = 234/253 (92.49%), Postives = 243/253 (96.05%), Query Frame = 1
BLAST of Cp4.1LG15g01920 vs. TrEMBL
Match: A0A061G6G3_THECC (SNARE associated Golgi protein family OS=Theobroma cacao GN=TCM_016549 PE=4 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 4.9e-109 Identity = 202/250 (80.80%), Postives = 229/250 (91.60%), Query Frame = 1
BLAST of Cp4.1LG15g01920 vs. TrEMBL
Match: B9SNT6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1278190 PE=4 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 4.9e-109 Identity = 203/247 (82.19%), Postives = 225/247 (91.09%), Query Frame = 1
BLAST of Cp4.1LG15g01920 vs. TrEMBL
Match: B9MU43_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s02260g PE=4 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 1.1e-108 Identity = 201/240 (83.75%), Postives = 223/240 (92.92%), Query Frame = 1
BLAST of Cp4.1LG15g01920 vs. TrEMBL
Match: K4CN28_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 399.8 bits (1026), Expect = 2.4e-108 Identity = 201/253 (79.45%), Postives = 228/253 (90.12%), Query Frame = 1
BLAST of Cp4.1LG15g01920 vs. TAIR10
Match: AT4G17790.1 (AT4G17790.1 SNARE associated Golgi protein family) HSP 1 Score: 378.3 bits (970), Expect = 3.8e-105 Identity = 188/238 (78.99%), Postives = 217/238 (91.18%), Query Frame = 1
BLAST of Cp4.1LG15g01920 vs. TAIR10
Match: AT4G09580.1 (AT4G09580.1 SNARE associated Golgi protein family) HSP 1 Score: 307.8 bits (787), Expect = 6.4e-84 Identity = 144/238 (60.50%), Postives = 195/238 (81.93%), Query Frame = 1
BLAST of Cp4.1LG15g01920 vs. TAIR10
Match: AT1G71940.2 (AT1G71940.2 SNARE associated Golgi protein family) HSP 1 Score: 303.1 bits (775), Expect = 1.6e-82 Identity = 145/219 (66.21%), Postives = 185/219 (84.47%), Query Frame = 1
BLAST of Cp4.1LG15g01920 vs. NCBI nr
Match: gi|449436828|ref|XP_004136194.1| (PREDICTED: uncharacterized membrane protein At4g09580 [Cucumis sativus]) HSP 1 Score: 455.3 bits (1170), Expect = 7.0e-125 Identity = 234/253 (92.49%), Postives = 243/253 (96.05%), Query Frame = 1
BLAST of Cp4.1LG15g01920 vs. NCBI nr
Match: gi|659132059|ref|XP_008465994.1| (PREDICTED: uncharacterized membrane protein At4g09580 [Cucumis melo]) HSP 1 Score: 453.0 bits (1164), Expect = 3.5e-124 Identity = 234/253 (92.49%), Postives = 242/253 (95.65%), Query Frame = 1
BLAST of Cp4.1LG15g01920 vs. NCBI nr
Match: gi|694424840|ref|XP_009340187.1| (PREDICTED: uncharacterized membrane protein At4g09580-like [Pyrus x bretschneideri]) HSP 1 Score: 407.1 bits (1045), Expect = 2.2e-110 Identity = 204/245 (83.27%), Postives = 229/245 (93.47%), Query Frame = 1
BLAST of Cp4.1LG15g01920 vs. NCBI nr
Match: gi|470128990|ref|XP_004300415.1| (PREDICTED: uncharacterized membrane protein At4g09580 [Fragaria vesca subsp. vesca]) HSP 1 Score: 402.5 bits (1033), Expect = 5.4e-109 Identity = 203/251 (80.88%), Postives = 232/251 (92.43%), Query Frame = 1
BLAST of Cp4.1LG15g01920 vs. NCBI nr
Match: gi|255573459|ref|XP_002527655.1| (PREDICTED: uncharacterized membrane protein At4g09580 [Ricinus communis]) HSP 1 Score: 402.1 bits (1032), Expect = 7.0e-109 Identity = 203/247 (82.19%), Postives = 225/247 (91.09%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |