Cp4.1LG15g01810 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTCTCATGATCCTTCTCTATTGCCCGTGGGAGTGAGATTCAGGCCTACCGATCCACAACTTCTTCAGTACTTGCATTGGAAGATTCATGGGCAACCATATTTCAAACGTGCAGTCTTAGACTGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGGTTCGGAGGCATGGACGGCGAAGATCTCTATTTCTTCACCAAACTCAAGAGGTCAACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCGGCCAATCCAATTTTTGCTACAAAAACCGATAAAACAATAATCGGTTATTGCAAACGCTTTAGGTTCGTTCTGTCATTTTGATTTCAATTTTTGTTAGAATCTTTAACCTTATGTTTGTGTCCTTGGAACATTTAAGTCATTGAATACATTTTAGGTACGAGAATGTCCAGTTGCCCGAGCATCATGGGGAATGGATTATGCATGAATATAGCTTGTATCAAGATTCGATACAACAAGCGGTAGATTCAGATTATGTTTTATGCCGATTCAAAAAGAACGAAAGACTTAAAAGAAAATTACAAAAAAATCTCGAGGAGGAGCAACTTAGCAAGAGAAGAATGACCACCTGA ATGGTGAGATTCAGGCCTACCGATCCACAACTTCTTCAGTACTTGCATTGGAAGATTCATGGGCAACCATATTTCAAACGTGCAGTCTTAGACTGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGGTTCGGAGGCATGGACGGCGAAGATCTCTATTTCTTCACCAAACTCAAGAGGTCAACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCGGCCAATCCAATTTTTGCTACAAAAACCGATAAAACAATAATCGGTTATTGCAAACGCTTTAGGTACGAGAATGTCCAGTTGCCCGAGCATCATGGGGAATGGATTATGCATGAATATAGCTTGTATCAAGATTCGATACAACAAGCGGTAGATTCAGATTATGTTTTATGCCGATTCAAAAAGAACGAAAGACTTAAAAGAAAATTACAAAAAAATCTCGAGGAGGAGCAACTTAGCAAGAGAAGAATGACCACCTGA ATGGTGAGATTCAGGCCTACCGATCCACAACTTCTTCAGTACTTGCATTGGAAGATTCATGGGCAACCATATTTCAAACGTGCAGTCTTAGACTGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGGTTCGGAGGCATGGACGGCGAAGATCTCTATTTCTTCACCAAACTCAAGAGGTCAACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCGGCCAATCCAATTTTTGCTACAAAAACCGATAAAACAATAATCGGTTATTGCAAACGCTTTAGGTACGAGAATGTCCAGTTGCCCGAGCATCATGGGGAATGGATTATGCATGAATATAGCTTGTATCAAGATTCGATACAACAAGCGGTAGATTCAGATTATGTTTTATGCCGATTCAAAAAGAACGAAAGACTTAAAAGAAAATTACAAAAAAATCTCGAGGAGGAGCAACTTAGCAAGAGAAGAATGACCACCTGA MVRFRPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGMDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSANPIFATKTDKTIIGYCKRFRYENVQLPEHHGEWIMHEYSLYQDSIQQAVDSDYVLCRFKKNERLKRKLQKNLEEEQLSKRRMTT
BLAST of Cp4.1LG15g01810 vs. TrEMBL
Match: A0A0A0KXM1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296900 PE=4 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 2.6e-64 Identity = 120/174 (68.97%), Postives = 140/174 (80.46%), Query Frame = 1
BLAST of Cp4.1LG15g01810 vs. TrEMBL
Match: A0A0A0LFJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G838730 PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 1.4e-62 Identity = 115/173 (66.47%), Postives = 139/173 (80.35%), Query Frame = 1
BLAST of Cp4.1LG15g01810 vs. TrEMBL
Match: A0A0A0M0I5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G652300 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 3.5e-61 Identity = 116/175 (66.29%), Postives = 141/175 (80.57%), Query Frame = 1
BLAST of Cp4.1LG15g01810 vs. TrEMBL
Match: A0A061FR05_THECC (Transcription factor-like protein OS=Theobroma cacao GN=TCM_044639 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.6e-26 Identity = 73/165 (44.24%), Postives = 99/165 (60.00%), Query Frame = 1
BLAST of Cp4.1LG15g01810 vs. TrEMBL
Match: A0A061FS95_THECC (Transcription factor-like protein OS=Theobroma cacao GN=TCM_044667 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 2.8e-26 Identity = 73/165 (44.24%), Postives = 99/165 (60.00%), Query Frame = 1
BLAST of Cp4.1LG15g01810 vs. NCBI nr
Match: gi|449448878|ref|XP_004142192.1| (PREDICTED: NAC transcription factor 29-like [Cucumis sativus]) HSP 1 Score: 253.1 bits (645), Expect = 3.7e-64 Identity = 120/174 (68.97%), Postives = 140/174 (80.46%), Query Frame = 1
BLAST of Cp4.1LG15g01810 vs. NCBI nr
Match: gi|778688961|ref|XP_011652873.1| (PREDICTED: NAC domain-containing protein 102-like [Cucumis sativus]) HSP 1 Score: 247.3 bits (630), Expect = 2.0e-62 Identity = 115/173 (66.47%), Postives = 139/173 (80.35%), Query Frame = 1
BLAST of Cp4.1LG15g01810 vs. NCBI nr
Match: gi|659131362|ref|XP_008465646.1| (PREDICTED: NAC domain-containing protein 72-like [Cucumis melo]) HSP 1 Score: 245.7 bits (626), Expect = 5.9e-62 Identity = 121/175 (69.14%), Postives = 141/175 (80.57%), Query Frame = 1
BLAST of Cp4.1LG15g01810 vs. NCBI nr
Match: gi|659085698|ref|XP_008443554.1| (PREDICTED: protein SOMBRERO-like [Cucumis melo]) HSP 1 Score: 244.2 bits (622), Expect = 1.7e-61 Identity = 121/175 (69.14%), Postives = 141/175 (80.57%), Query Frame = 1
BLAST of Cp4.1LG15g01810 vs. NCBI nr
Match: gi|449442783|ref|XP_004139160.1| (PREDICTED: NAC domain-containing protein 66-like [Cucumis sativus]) HSP 1 Score: 242.7 bits (618), Expect = 5.0e-61 Identity = 116/175 (66.29%), Postives = 141/175 (80.57%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|