Cp4.1LG15g01330 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG15g01330
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTranscription initiation factor IIF alpha subunit family protein
LocationCp4.1LG15 : 984993 .. 990855 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTATCATTCCCGTTTTCGCCTGCAATTTTCTCAAAATTCTCATCGCTCTCTTCATCTTCTTTCTTCTCTTCGGTTCCTCTCTTAAATTTCTCTCTGCTCCTACTATTAGCTTCCTCTCCCTCTGTTACATCGTCTAATTTCTGGAGATCGTCTAATTTCTGGAGATCGTCTAATTTCTGGAGATTGAGGAGAATTTTGCACGAATTTGCCCTGCAATTTTACGGTAAGAAATCTTTCCATCCTTTTGTTTCTTCCTAAATTGGGTGGGTTTTGGCTGTTATTTGAAGAAAAAAAGAACTCCTAGATTTGTAATAGGAATTCTTTTTGACTACCTTGGCCTAGTGGTGAGGGGAATGCAAATAATATAGGGTTTTGAGCTAATGGATTGATTGTGATCACCAACCTAAGATTTAAGCTGTGATATAATATCTTACTGATTATCTTAGCAACCAAACGTAGAAGGCGCAGTTGTTGGGTGAGAATGTCAAGCTAAGCTGCCCAAACATTCACAGATATATATATATATATACAAAGGGATTCTTTGGTGATTCGTGATTTTTCTTGGGTGTTGTAGATTTTTGTGGCTGAATTAGGGGGTACGCGATGTCTTTGGATTTGATGCTGAAGCCATCGTGCAGTGGATGCGGATCCACGACGGAGCTGTATGGGAGCAATTGTAAGCACATGACATTGTGCTTGTCCTGTGGCAAAACTATGGCTGAGAACAAGGGAAAATGTTATGACTGTGGTGCTACCCTAACTCGCTTAATAAGAGTTCGTTCTCTACCTCGTCTTTCTTAAGTAGCGTGATGATTTGAATGTGTTAAATTTGTACTCATGTGATTAGGGCTTTTCATTTGTGACAAATTTAATAATTTTCATAATAGCGTGGATTGAGTATTGTCTGCCTATATTCTAGGAATACAATGTTCGATCAAGTGCAAGTAGCGACAAGAACTACTGCATTGGGAGGTTCATGAGCGGGCTGCCAAACTTTTCTAAGAAGAAAAACGCTGAGAATAAATGGTCTCTTTACAAGGAAGGTCTACAAGGACGCCACCTTACGGATGCCCTTCGGGTACTTTGTTGACTTTTGTTTTGCTTCGTTTCTTAAGTTTGTCTTTGGATAGTTTATTGTTTTGGAAGCCTGGATACTGTTGACATGATATCGATTTTTCTTTTAGAACTTATTAACTGTTGAGAGAAAATAGGGCAAAGGTAATTGATGCTATACTTCATCAAGATGAAAAGGGATACACATTCTTTACGCAGATAAATGATCCCTTATGGACTTGGAGTCTCGTGCATTTTTTTTGCCACTTCTTGGGCCTTCTGCCACTGTAGAGTACAGAAACGTATCTTCATTGTATTAATTGGCACTTTTCTATTTTTTTTAATGCGTACATATATGTTAAACCATGTAATTATATGCTTCGTATTCAATATTTAAATACTACCTCGTGTTAACCATAATTCAGCTTTGACCTTGGAGATGCATTTGATTAATATCTTGTTGCGTTTTTTTTTTTCTTTTTTCTCCCTTGAAGTTAGTTGTTTTGTTGCTTATTGCTCATCGTTTTTTTTTTTTTTTGGAAGTTTTTTGCAATCTTGTCCTGCCTGACCCTTATTAATTATGATTCTGTTAATGTAGGAAAAGTACAAGAATAGACCCTGGGTCTTGGAAGATGAAACGGGTCAATTTCAATTCCAAGGTCATCTTGAGGGCTCACAATCAGCAACATATTACTTGCTTGTATTGCAAGGAAAGGAATTTACGGCCATTCCTGCTGGTTCTTGGTATGGTTTATCTTTGATTTAGTTTGCTATGAATCAAGTTATAGACCTTTATTTGTTTGTCATAATCTTCTTCATACTTGGTTTTTACATTATCCTATTCTTGAAGGCTTTTATATTGTTAGGGTGAAAATTTTCAAGTCATCCATGGTGGTATTGGCATGACTGACCTGAATTTTCAGGTACAACTTCAACAAAGTGGCACAGTATAAGCAACTTACTTTGGAGGAGGCAGAAGAAAAAATGAAGAATCGAAAGAAGACGGCAGATGGATATGAAAGATGGATGATGAAAGCTGCAAATAATGGTGCTGCTGCATTTGGTGAAGTTGAGAAGTTTGATGACAAAGAAGGTGCTCGTGGTGGTGGTGGTAGGGGACGGAGAAAAGCTACTGGTGATGAGAATGAAGGTAATGCCTCAGATAGGGGAGAGGAAGATGAAGAAGAAGAGGCAACAAGGAAGAACAGATTGGGACTCAATAAAAAGGGTGGCGGTGACGACGACGACGACGAAGGTCCTAGGGGAGGTGACCATGACATGGATGATGATGATATTGAGAAAGGTAAATCTTTCCCATTTATAGAAAAACAAAGCAATTCGAGCTGTACCATGTCATTGTCATCTCTAAAGAACGTCACTTGCCATCTGTTAGATTGTTTGTTTGATAGGCCATCACCATCATATGGGAATAAAATGCATCAAATGAGTGGTTTAAAGTTTTGGATGGAATTATGTTGGCAAATTCTTTTGTTCTTATCCAGGAAGATCAAATTTTCACCATGTTTTTTTTAATAATTTGTTTTTGGAAGGAAACACTTATGTCTCCATGCATGTGAAATTCAGAAATTAATTCACATGATGAGCATTGAGGCCAATGTCATTGTTCCTCTTTGTTAACGTGCCTGTTGAACTTTATAGGAGATGATTGGGAGCATGAAGAGATTTTTACTGATGATGATGAAACTACTGCTCCAGATCGTGAAGAAAGGGAGGATTTAGCCCCTGAAGTTCCTGCACCTCCAGAAATCAAGCAGGTTGTCTAGCACTTGGAAAAAAAAAAAAAAAAAAAATCACTGATACATATCATTTCATTGATTGAATAGAAACAATTCTATATTGTTAAATTTAACAGTTGAAGTAACCATATATGTTTTCCTCCAAAGTTGCCGAAAAGGTCGTAAGAAACGTTTCTAAAAAATGAAAAGGAAAGAAAAGAAAAGAAATGAAAAAAAAGCTAATGCAGGATGGGTGATGAAAAGTAGGGAAGGCAGAGAGGAGATTTTGTATGACCATAATTTTTTTTCCTGAAAGTAGCCCCTATGTGTCTACGACCACCATTCACATGAAAATATGCATGGGGCGTGGTAAATGAAAGCGGTATAGTGGAGCATTTTGCATTGGGCTCTATTTATCTAACTGCTGATATAATTCCATATATAATTATGAAATCTTTGTCGAGTGTTTGCAATGAAGAGTAAAGTCAGGATGATAGAATGCTTACAGGATTTACAACTTGAGCTTAGGATATGGAGTACTATTTAAGAAGGAATAGGAAAAAGGCAAGGTGTACAAGGACGGTAGAAATTATTTTATGAAATAGTAGTCGTGGATGTCGTGTTATTATGTAATTCTTAGTTTTTCCTAGAATCTGTTGCTGCTAGAGTCTTCATTGTTACTATTACTATTGTAGTCTAATGGGGTATGTATTTTCTTCGGTGGCCTAGGCTGGCCGATTTGATACTCAATCTGAAAACATCACCGACATTTTTGCGATTTGGTTTAGACGTAGTAGTAACCTGAAGCCCTTGATATAACTAACACCTTAATGTTTGATGTCCATTGACCTTCAAAATCATCTGGAGTTCTGGTTGACATCTTGGATTTGTTGTCCATTTTCCTGAATATAGTGTAACGTTTCAAGTCAAAGATATCACATATCAGATACAGATGGCCTGTTTGTATGCTTAAGCTTTCTAGTTCAGCAAATTATTTTCTCACTATGCAGGATGACGAAGACGAGGAGGATGAAGAAAATGAAGGGGAAGGGGGGCTGAGCAAATCTGGGAAAGAGTTGAAGAAATTGCTTAGGCGTACTGGAGGGCTTAATGATTCAGATGGAGAGGACGATGACGACGACGACGATGTAAGATTCTCTTTTGATTTCTGTGAACAGAATTTAACAGCATCCAAAACTTTAAATTATAATGACCCTACGAGCAGTTTTTCGAATAGAATCTGTATGAATTGCACTTGATCATTAGTCATGGTATTTTTAGCAGTCTAAAGCAGCATTATTTTGATCATGTATTTTGCTCTCTGCAATGCCTTGAACCACCCTGATTTGGCTTAGCAAGGACCATGTAAATAATATAGAATTTAGAGAGAACGGATTAACACCTATATAAAATTTAATATCTTACGAGTTACTTTGACAATTAAACGTAGTAAGGGCAAACAGTTGTATTGGGAATAATCAAGGTGCGCCCAGAAAACAATGATGAAAAGAATTTCTATTAGCAGCAACAAAAATTTGTTAGCAGTGTCAACGATGCCTCGATATTTTTGGAATCCTACCGAGTTGACCTGATCGAATCAGCCTTTATACATAGCCCTCTACTTATTGTGATACTGCCTGCATTTTCTACTGTTAAGTGGCTTTATACCTTTTATGTATTCAGGAGGAGGATACTGGTGACACACCAGTTTTGCCTTCGAAGCAGAAGGATACTGTTAAGGAAGAAGCTGCGTCCAGCAGTCCCTCAAAACCAACACCTTCTGGATCTGCTAAGGGAACCCCCTCCACTGCAAAGACCGCAAAAGGAAAAAGAAAAAACGGCGAGGATGTGAAACCATCCAGTGCACCTCCGAAGAAAATGAAAACAGAGACGGTATGTCGTGCTGTCTCATGGTTTAGTCTTACGGTTTAAGCTTCGAGAACGAGAGTACTTTTACTTATATTAGAAGGATAAACAACTTTTTTTTGGGATATTCAGGAATCAAAGCCTACAGATGAAGCCTTGTCTACTTCTAAAAGTACAGCCTCAAAAGGTGCACCAGTATCGGTCAAAACTGAATCAGCATCGAATTCTGGACCCGTTACTGAGGAAGAAATTAGAGCTGTCTTGCGCCAAAGGACACCCGTAACGACGCAGGATCTTGTTGCGAAATTCAAGGCAAGACTGCGATGTAAAGAGGTATAATGTTGCTATGGTTTCATGACATGTTTTACATAAACTGTTCTTTCACTATGTTATGGTTGAGAAGCGGGCGGTTTAGGGTGTTTCATCATTCACTTTTCCTTCACTTCTTTGGTCGATCGCGAGCGAAATATGAACTCGATGGACCACAACTATTCTGTGATGCCTTATATTATATCCCATTATGCAGGACAAGAATGCTTTTGCAGAGATCCTTAGGAGAATCTCAAGGATCCAAAAGACGAACGGAGGACCGAGTTACGTCGTGTTGAGAAAACCCGAAGACTAGAAGAATTAAGTGTATGTTTCATCTTTATGATGTTACTGGCTTTCATCGAGTAGAATGTTTATGTGGTGAAACTGTGTGCTGCAAAAGCTCGAAGAGCCTCTTCTTTCACTCACATGGTGTGGTGCTTTTATCTAGGCAAAGGGCAAAGGGCAAAGGGCAAAGGGCAAAGGGCAAAGGATAAATTTGTGAGTTTGAAAGAGAGGTTGGGAATACGTTGAGAAAGAAACGAAAAGAAATGTTGAGACCCTTTGTCATATTGGTTGTCATATTGATTTTGGCGTTTTTTCTTTGAATTTCTAAAATAATGGAATGAGTAAACTAAGTATTTAAGATTTGATCCTTATCTTCTTCACGTGCTTTGATTAAAGTTTATTATCTTGCTCACTTGTGAGGATTAACTCACCGGGATCGGGATGTCTTATCTGTCTTCGTCTTGTCTTCTATGAGATTTGATGTTGTCTGTGTCTGCTTTGTTCTGTTATGTATTGTCATTAGTCTCATGGGTTTTAAAATGCGTCTACTAGGGAGAAGTTTCTACCACTGAAGTTTAGAGAAACGATGTACTTATGAGGATTAACTGATC

mRNA sequence

GTATCATTCCCGTTTTCGCCTGCAATTTTCTCAAAATTCTCATCGCTCTCTTCATCTTCTTTCTTCTCTTCGGTTCCTCTCTTAAATTTCTCTCTGCTCCTACTATTAGCTTCCTCTCCCTCTGTTACATCGTCTAATTTCTGGAGATCGTCTAATTTCTGGAGATCGTCTAATTTCTGGAGATTGAGGAGAATTTTGCACGAATTTGCCCTGCAATTTTACGATTTTTGTGGCTGAATTAGGGGGTACGCGATGTCTTTGGATTTGATGCTGAAGCCATCGTGCAGTGGATGCGGATCCACGACGGAGCTGTATGGGAGCAATTGTAAGCACATGACATTGTGCTTGTCCTGTGGCAAAACTATGGCTGAGAACAAGGGAAAATGTTATGACTGTGGTGCTACCCTAACTCGCTTAATAAGAGAATACAATGTTCGATCAAGTGCAAGTAGCGACAAGAACTACTGCATTGGGAGGTTCATGAGCGGGCTGCCAAACTTTTCTAAGAAGAAAAACGCTGAGAATAAATGGTCTCTTTACAAGGAAGGTCTACAAGGACGCCACCTTACGGATGCCCTTCGGGAAAAGTACAAGAATAGACCCTGGGTCTTGGAAGATGAAACGGGTCAATTTCAATTCCAAGGTCATCTTGAGGGCTCACAATCAGCAACATATTACTTGCTTGTATTGCAAGGAAAGGAATTTACGGCCATTCCTGCTGGTTCTTGGTACAACTTCAACAAAGTGGCACAGTATAAGCAACTTACTTTGGAGGAGGCAGAAGAAAAAATGAAGAATCGAAAGAAGACGGCAGATGGATATGAAAGATGGATGATGAAAGCTGCAAATAATGGTGCTGCTGCATTTGGTGAAGTTGAGAAGTTTGATGACAAAGAAGGTGCTCGTGGTGGTGGTGGTAGGGGACGGAGAAAAGCTACTGGTGATGAGAATGAAGGTAATGCCTCAGATAGGGGAGAGGAAGATGAAGAAGAAGAGGCAACAAGGAAGAACAGATTGGGACTCAATAAAAAGGGTGGCGGTGACGACGACGACGACGAAGGTCCTAGGGGAGGTGACCATGACATGGATGATGATGATATTGAGAAAGGAGATGATTGGGAGCATGAAGAGATTTTTACTGATGATGATGAAACTACTGCTCCAGATCGTGAAGAAAGGGAGGATTTAGCCCCTGAAGTTCCTGCACCTCCAGAAATCAAGCAGGATGACGAAGACGAGGAGGATGAAGAAAATGAAGGGGAAGGGGGGCTGAGCAAATCTGGGAAAGAGTTGAAGAAATTGCTTAGGCGTACTGGAGGGCTTAATGATTCAGATGGAGAGGACGATGACGACGACGACGATGAGGAGGATACTGGTGACACACCAGTTTTGCCTTCGAAGCAGAAGGATACTGTTAAGGAAGAAGCTGCGTCCAGCAGTCCCTCAAAACCAACACCTTCTGGATCTGCTAAGGGAACCCCCTCCACTGCAAAGACCGCAAAAGGAAAAAGAAAAAACGGCGAGGATGTGAAACCATCCAGTGCACCTCCGAAGAAAATGAAAACAGAGACGGAATCAAAGCCTACAGATGAAGCCTTGTCTACTTCTAAAAGTACAGCCTCAAAAGGTGCACCAGTATCGGTCAAAACTGAATCAGCATCGAATTCTGGACCCGTTACTGAGGAAGAAATTAGAGCTGTCTTGCGCCAAAGGACACCCGTAACGACGCAGGATCTTGTTGCGAAATTCAAGGCAAGACTGCGATGTAAAGAGGACAAGAATGCTTTTGCAGAGATCCTTAGGAGAATCTCAAGGATCCAAAAGACGAACGGAGGACCGAGTTACGTCGTGTTGAGAAAACCCGAAGACTAGAAGAATTAAGTGCAAAGGGCAAAGGGCAAAGGGCAAAGGGCAAAGGGCAAAGGATAAATTTGTGAGTTTGAAAGAGAGGTTGGGAATACGTTGAGAAAGAAACGAAAAGAAATGTTGAGACCCTTTGTCATATTGGTTGTCATATTGATTTTGGCGTTTTTTCTTTGAATTTCTAAAATAATGGAATGAGTAAACTAAGTATTTAAGATTTGATCCTTATCTTCTTCACGTGCTTTGATTAAAGTTTATTATCTTGCTCACTTGTGAGGATTAACTCACCGGGATCGGGATGTCTTATCTGTCTTCGTCTTGTCTTCTATGAGATTTGATGTTGTCTGTGTCTGCTTTGTTCTGTTATGTATTGTCATTAGTCTCATGGGTTTTAAAATGCGTCTACTAGGGAGAAGTTTCTACCACTGAAGTTTAGAGAAACGATGTACTTATGAGGATTAACTGATC

Coding sequence (CDS)

ATGTCTTTGGATTTGATGCTGAAGCCATCGTGCAGTGGATGCGGATCCACGACGGAGCTGTATGGGAGCAATTGTAAGCACATGACATTGTGCTTGTCCTGTGGCAAAACTATGGCTGAGAACAAGGGAAAATGTTATGACTGTGGTGCTACCCTAACTCGCTTAATAAGAGAATACAATGTTCGATCAAGTGCAAGTAGCGACAAGAACTACTGCATTGGGAGGTTCATGAGCGGGCTGCCAAACTTTTCTAAGAAGAAAAACGCTGAGAATAAATGGTCTCTTTACAAGGAAGGTCTACAAGGACGCCACCTTACGGATGCCCTTCGGGAAAAGTACAAGAATAGACCCTGGGTCTTGGAAGATGAAACGGGTCAATTTCAATTCCAAGGTCATCTTGAGGGCTCACAATCAGCAACATATTACTTGCTTGTATTGCAAGGAAAGGAATTTACGGCCATTCCTGCTGGTTCTTGGTACAACTTCAACAAAGTGGCACAGTATAAGCAACTTACTTTGGAGGAGGCAGAAGAAAAAATGAAGAATCGAAAGAAGACGGCAGATGGATATGAAAGATGGATGATGAAAGCTGCAAATAATGGTGCTGCTGCATTTGGTGAAGTTGAGAAGTTTGATGACAAAGAAGGTGCTCGTGGTGGTGGTGGTAGGGGACGGAGAAAAGCTACTGGTGATGAGAATGAAGGTAATGCCTCAGATAGGGGAGAGGAAGATGAAGAAGAAGAGGCAACAAGGAAGAACAGATTGGGACTCAATAAAAAGGGTGGCGGTGACGACGACGACGACGAAGGTCCTAGGGGAGGTGACCATGACATGGATGATGATGATATTGAGAAAGGAGATGATTGGGAGCATGAAGAGATTTTTACTGATGATGATGAAACTACTGCTCCAGATCGTGAAGAAAGGGAGGATTTAGCCCCTGAAGTTCCTGCACCTCCAGAAATCAAGCAGGATGACGAAGACGAGGAGGATGAAGAAAATGAAGGGGAAGGGGGGCTGAGCAAATCTGGGAAAGAGTTGAAGAAATTGCTTAGGCGTACTGGAGGGCTTAATGATTCAGATGGAGAGGACGATGACGACGACGACGATGAGGAGGATACTGGTGACACACCAGTTTTGCCTTCGAAGCAGAAGGATACTGTTAAGGAAGAAGCTGCGTCCAGCAGTCCCTCAAAACCAACACCTTCTGGATCTGCTAAGGGAACCCCCTCCACTGCAAAGACCGCAAAAGGAAAAAGAAAAAACGGCGAGGATGTGAAACCATCCAGTGCACCTCCGAAGAAAATGAAAACAGAGACGGAATCAAAGCCTACAGATGAAGCCTTGTCTACTTCTAAAAGTACAGCCTCAAAAGGTGCACCAGTATCGGTCAAAACTGAATCAGCATCGAATTCTGGACCCGTTACTGAGGAAGAAATTAGAGCTGTCTTGCGCCAAAGGACACCCGTAACGACGCAGGATCTTGTTGCGAAATTCAAGGCAAGACTGCGATGTAAAGAGGACAAGAATGCTTTTGCAGAGATCCTTAGGAGAATCTCAAGGATCCAAAAGACGAACGGAGGACCGAGTTACGTCGTGTTGAGAAAACCCGAAGACTAG

Protein sequence

MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNVRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGLQGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANNGAAAFGEVEKFDDKEGARGGGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKPTDEALSTSKSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
BLAST of Cp4.1LG15g01330 vs. Swiss-Prot
Match: T2FA_ARATH (Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74 PE=1 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 2.7e-182
Identity = 369/548 (67.34%), Postives = 437/548 (79.74%), Query Frame = 1

Query: 1   MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYN 60
           MS  L L  SC GCGS ++LYGS+C+HMTLCL CG+TMA+NK KC++CG  +TRLIREYN
Sbjct: 1   MSNCLQLNTSCVGCGSQSDLYGSSCRHMTLCLKCGRTMAQNKSKCHECGTVVTRLIREYN 60

Query: 61  VRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGLQGRHLTDALREKYKNRPWVL 120
           VR++A +DKNY IGRF++GLPNF  KK +ENKWSL K+  QGR  TDA REK KN+PW+L
Sbjct: 61  VRAAAPTDKNYFIGRFVTGLPNF--KKGSENKWSLRKDIPQGRQFTDAQREKLKNKPWIL 120

Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
           EDETGQFQ+QGHLEGSQSATYYLLV+Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQFQYQGHLEGSQSATYYLLVMQNKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 181 KNRKKTADGYERWMMKAANNGAAAFGEVEKFDDKEGARGGGGRGRRKAT-GDENEGNASD 240
           KNR+KTADGY+RWMMKAANNG A FGEV+   +  G  GGGGRGR+K++ GDE EGN SD
Sbjct: 181 KNRRKTADGYQRWMMKAANNGPALFGEVDNEKESGGTSGGGGRGRKKSSGGDEEEGNVSD 240

Query: 241 RGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDD 300
           RG+EDEEEEA+RK+RLGLN+K   DDDD+EGPRGGD DMDDDDIEKGDDWEHEEIFTDDD
Sbjct: 241 RGDEDEEEEASRKSRLGLNRK-SNDDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDD 300

Query: 301 ETTAPDREERED-LAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLN 360
           E    D EERED LAPE+PAPPEIKQD++DEE+EE   EGGLSKSGKELKKLL +  GL+
Sbjct: 301 EAVGNDPEEREDLLAPEIPAPPEIKQDEDDEENEEE--EGGLSKSGKELKKLLGKANGLD 360

Query: 361 DSDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKG 420
           +SD +DDDD DDEE+T    V  SKQK+  KEE   ++P+KP PSG  +GTP  AK +KG
Sbjct: 361 ESDEDDDDDSDDEEETNYGTVTNSKQKEAAKEEPVDNAPAKPAPSGPPRGTP-PAKPSKG 420

Query: 421 KRK--NGEDVKPSSAPPKKMKTETESKPT---DEALSTSKST----ASKGAPVSVKTESA 480
           KRK  +G+  KPSS+  KK+KTE + K +   + A + SKS     A K  P S    S+
Sbjct: 421 KRKLNDGDSKKPSSSVQKKVKTENDPKSSLKEERANTVSKSNTPTKAVKAEPASAPASSS 480

Query: 481 S-NSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGG 537
           S  +GPVTE+EIRAVL ++  VTTQDLV++FKARL+ KEDKNAFA ILR+IS+IQK  G 
Sbjct: 481 SAATGPVTEDEIRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISKIQKNAGS 540

BLAST of Cp4.1LG15g01330 vs. Swiss-Prot
Match: T2FA_DICDI (General transcription factor IIF subunit 1 OS=Dictyostelium discoideum GN=gtf2f1 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 8.4e-11
Identity = 113/446 (25.34%), Postives = 190/446 (42.60%), Query Frame = 1

Query: 114 KNRPWVLEDETGQFQFQGHLEGSQ-SATYYLLVLQGK-EFTAIPAGSWYNFNKVAQYKQL 173
           K  PW LED  G   +QG++EG+Q S+ Y+L + Q      A+P   WYNF    +++ L
Sbjct: 146 KTIPWKLEDSEGNNTYQGNVEGNQASSNYFLFMFQSDGSIKAVPCNDWYNFRPKKEFQSL 205

Query: 174 TLEEAEEKMKNRKKTADGYERWMMKAANNGAAAFGEVEKFDDKEGARGGGGRGRRKATGD 233
           T EEAE+ MK + +  D +   + K             K D      GG     +K+  +
Sbjct: 206 TTEEAEDFMKKKNQEWDVFTSRLQK-------------KTDPSGSGSGGSESSGKKSIEE 265

Query: 234 ENEGNASDRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEH 293
             E    +R E+    + T + +          + +DEG           + E GD  + 
Sbjct: 266 LEEAEHRNRNEDPNRYKTTNEEKKKKKAPARRREREDEG-----------NGEDGDAPDF 325

Query: 294 EEIFTDDDETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLL 353
           E  F DDD+ T  D +                +D+   E++E E +  L++ G E+KK++
Sbjct: 326 ESKFDDDDDDTYMDGDGLTG------------EDENQIEEDEEEEDVDLTEGGLEMKKMI 385

Query: 354 RR-----------------------TGGLNDSDGEDDDDDDDEEDTGDTPVLPSKQ---- 413
           ++                       TGG +D D ++DD+D D++D  + P +  K     
Sbjct: 386 KKQQQQNDSEDDLADDDDKKDNNGGTGGGDDEDDDEDDEDPDQDDLSNLPKVFGKSNADG 445

Query: 414 --KDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGK-RKNGEDVKPSSAPPKKMKTETE 473
               +VK+E      SK +     K   S+ K+ + K +KN  D    +   KK+K E  
Sbjct: 446 TTNSSVKKEDDGGKDSKSSKKSKKKDKDSSPKSKEKKSKKNKSDSSVDNRESKKIKKEPS 505

Query: 474 SKPTDEALSTSKSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA 528
           S    +  S S+    +   +        N  P TEE I+ VL++   V + DL+  FK 
Sbjct: 506 SPQAVQPNSPSQQQQQQQQNID------PNDPPFTEEYIKIVLQKSKKVKSLDLINIFKG 549

BLAST of Cp4.1LG15g01330 vs. TrEMBL
Match: A0A0A0LCA6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G624050 PE=4 SV=1)

HSP 1 Score: 925.6 bits (2391), Expect = 2.7e-266
Identity = 498/540 (92.22%), Postives = 517/540 (95.74%), Query Frame = 1

Query: 1   MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYN 60
           MS DL+LK SCSGCGSTTELYGSNCKHMTLCL+CGKTMAENKGKCYDCGAT+TRLIREYN
Sbjct: 1   MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60

Query: 61  VRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGLQGRHLTDALREKYKNRPWVL 120
           VR+SAS+DKNY IGRFMSGLPNFSKK+NAENKWSLYKEGLQGR L+DALREKYKNRPW+L
Sbjct: 61  VRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120

Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
           EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 181 KNRKKTADGYERWMMKAANNGAAAFGEVEKFDDKEGARGGGGRGRRKATGDENEGNASDR 240
           KNRKKTADGYERWMMKAA+NG AAFGEVEKFDDKE   G  GRGRRK TGDENEGN SDR
Sbjct: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETV-GTSGRGRRKTTGDENEGNVSDR 240

Query: 241 GEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDE 300
           GEEDEEEEA RKNRLGL+KKGGGDDDD+EGPRGGDHD+DDDDIEKGDDWEHEEIFTDDDE
Sbjct: 241 GEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDE 300

Query: 301 TTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDS 360
           TTAPDREEREDLAPEVPAPPEIKQD+ED EDEENEGEGGLSKSGKELKKLLRRTGGLNDS
Sbjct: 301 TTAPDREEREDLAPEVPAPPEIKQDEED-EDEENEGEGGLSKSGKELKKLLRRTGGLNDS 360

Query: 361 DGEDDDDDDD-EEDTGDTPVLPSKQKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGK 420
           DGEDDDDDDD +EDTG TPVLPSKQKDTVKEEAA++SPSKPTPSGSAKGTPSTAKTAKGK
Sbjct: 361 DGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGK 420

Query: 421 RKNGEDVKPSSAPPKKMKTETESKPTDEALSTSKSTASKGAPVSVKTESASNSGPVTEEE 480
           RKNGEDVKPSSAPPKKMKTETESK TDE + TSKSTASKGAP SVKTE +S+SGPVTEEE
Sbjct: 421 RKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEE 480

Query: 481 IRAVLRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 540
           IRAVLRQRTPVTTQDLVAKFKARLR  EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Sbjct: 481 IRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 538

BLAST of Cp4.1LG15g01330 vs. TrEMBL
Match: D7TRJ8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0187g00350 PE=4 SV=1)

HSP 1 Score: 736.1 bits (1899), Expect = 3.0e-209
Identity = 411/542 (75.83%), Postives = 468/542 (86.35%), Query Frame = 1

Query: 1   MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYN 60
           MS DLMLKPSCSGCGSTT+LYGSNCKHMTLCLSCGKTMAEN GKCYDCG  +TRLIREYN
Sbjct: 1   MSFDLMLKPSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLIREYN 60

Query: 61  VRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGLQGRHLTDALREKYKNRPWVL 120
           VR+++S DKNY IGRF++GLP FSKKKNA+NKWSL+KEGLQGR ++DALREKYKN+PW+L
Sbjct: 61  VRTNSSGDKNYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLL 120

Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
           EDETGQ+Q+ G LEGSQSATYYLL++QGKEF AIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 181 KNRKKTADGYERWMMKAANNGAAAFGEVEKFDDKE-GARGGGGRGRRKATGDENEGNASD 240
           KNR++TADGY+RWMMKAANNG AAFGEVEK DDKE G   GGGRGR+K TGDE EGN SD
Sbjct: 181 KNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSD 240

Query: 241 RGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDD 300
           + EEDEEEEA RKNRLGLNK+ G  DDD+EGPRGGDHD+DDDDIEKGDDWEHEEIFTDDD
Sbjct: 241 KAEEDEEEEAERKNRLGLNKRSG--DDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDD 300

Query: 301 ETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLND 360
           E    D EEREDLAPEVPAPPEIKQD+ED ED+ NE EGGLSKSGKELKKLL +  G+ND
Sbjct: 301 EAVGNDPEEREDLAPEVPAPPEIKQDEED-EDDSNEEEGGLSKSGKELKKLLGKAAGMND 360

Query: 361 SDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGK 420
           SD EDDDDD++E++ G +PVL  KQKD  KEE A +SP K + + SA+ TP T+K++KGK
Sbjct: 361 SDAEDDDDDEEEDEIGLSPVLAPKQKDVPKEEPADNSPMK-SATASARSTPPTSKSSKGK 420

Query: 421 RK-NGEDVKPSS-APPKKMKTETESKPT--DEALSTSKSTAS-KGAP-VSVKTESASNSG 480
           RK NG+D+K ++  PPKK+KTE ESK +  DE  S SK TA+ KG P  SVKT S S++G
Sbjct: 421 RKSNGDDMKTTNGGPPKKVKTENESKSSAKDEGPSPSKVTATPKGTPSSSVKTGSTSSAG 480

Query: 481 PVTEEEIRAVLRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVV 536
           PVTE+EIRAVL Q+ PVTTQDLVAKFKARL+ +EDK AFA+ILRRIS+IQKTN GP+YVV
Sbjct: 481 PVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTN-GPNYVV 537

BLAST of Cp4.1LG15g01330 vs. TrEMBL
Match: B9S068_RICCO (Tfiif-alpha, putative OS=Ricinus communis GN=RCOM_1299530 PE=4 SV=1)

HSP 1 Score: 734.9 bits (1896), Expect = 6.8e-209
Identity = 420/540 (77.78%), Postives = 466/540 (86.30%), Query Frame = 1

Query: 2   SLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNV 61
           ++DLMLK SCSGCGSTT+LYGSNCKHMTLCLSCGKTMAEN  KC+DCGAT++RLIREYNV
Sbjct: 3   TMDLMLKGSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHAKCFDCGATVSRLIREYNV 62

Query: 62  RSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGLQGRHLTDALREKYKNRPWVLE 121
           R+S+SSDKNY IGRF++GLP+FSKKKNAENKWSL KEGLQGR LTDALREKYKNRPW+LE
Sbjct: 63  RASSSSDKNYFIGRFVTGLPSFSKKKNAENKWSLQKEGLQGRQLTDALREKYKNRPWLLE 122

Query: 122 DETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 181
           DETGQFQ+QGHLEGSQSATYYLL+LQGKEF AIPA SWYNFNKVAQYKQLTLEEAEEKM+
Sbjct: 123 DETGQFQYQGHLEGSQSATYYLLILQGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEKMR 182

Query: 182 NRKKTADGYERWMMKAANNGAAAFGEVEKFDDKEGARGGGGRGRRKATGDENEGNASDRG 241
           NR+KTADGYERWMMKAANNG AAFGEVEK DDK+      GRGR+KA GD+ EGN SDRG
Sbjct: 183 NRRKTADGYERWMMKAANNGPAAFGEVEKLDDKDSG-AASGRGRKKAAGDDEEGNVSDRG 242

Query: 242 EEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDET 301
           +EDEEEEA RKNRLGLNK+GG  DDD+EGPRGGDHD+DDDDIEKGDDWEHEEIFTDDDE 
Sbjct: 243 DEDEEEEAARKNRLGLNKRGG--DDDEEGPRGGDHDIDDDDIEKGDDWEHEEIFTDDDEA 302

Query: 302 TAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSD 361
              DREEREDLAPEVPAPPEIKQ DED+EDEENE EGGLSKSGKELKKLL R GGLNDSD
Sbjct: 303 VGNDREEREDLAPEVPAPPEIKQ-DEDDEDEENE-EGGLSKSGKELKKLLGRAGGLNDSD 362

Query: 362 GEDDDDDDD-EEDTGDTPVLPSKQKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGKR 421
            EDDDDDDD +ED   +PVL  KQ  T KEE A +SP+KP  S S+KGTPST+K+AKGKR
Sbjct: 363 AEDDDDDDDMDEDVSISPVLAPKQ--TPKEEPADNSPAKPMTSASSKGTPSTSKSAKGKR 422

Query: 422 K-NGEDVKPSS-APPKKMKTETESKPT--DEALSTSKSTAS-KGAPVSVKTESASNSGPV 481
           K N ++ K ++ AP KK+KTE E KPT  +E+  TSKS+A+ K AP S KT S S   PV
Sbjct: 423 KLNSDEAKQTNVAPQKKVKTENELKPTVKEESAPTSKSSATPKAAPPSAKTGSTS---PV 482

Query: 482 TEEEIRAVLRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLR 536
           TEEEIRAVL Q  PVTTQDLVA+FK+RL+  EDK AFA+ILRRIS+IQKT+G  SYVVLR
Sbjct: 483 TEEEIRAVLLQNGPVTTQDLVARFKSRLKSSEDKKAFADILRRISKIQKTSGS-SYVVLR 531

BLAST of Cp4.1LG15g01330 vs. TrEMBL
Match: B9IH94_POPTR (Transcription initiation factor IIF alpha subunit family protein OS=Populus trichocarpa GN=POPTR_0016s01680g PE=4 SV=2)

HSP 1 Score: 731.5 bits (1887), Expect = 7.5e-208
Identity = 422/544 (77.57%), Postives = 470/544 (86.40%), Query Frame = 1

Query: 1   MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYN 60
           MS DL+LKPSCSGCGSTT+LYGSNCKHMTLCL+CGKTMAEN+GKC+DCG T++RLIREYN
Sbjct: 1   MSFDLLLKPSCSGCGSTTDLYGSNCKHMTLCLNCGKTMAENRGKCFDCGTTVSRLIREYN 60

Query: 61  VRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGLQGRHLTDALREKYKNRPWVL 120
           VR+S SSDKNY IGRF++GLP+FSKKKNAENKWSL+KEG+ GR +TDALREK+KN+PW+L
Sbjct: 61  VRASTSSDKNYFIGRFVTGLPSFSKKKNAENKWSLHKEGILGRQITDALREKFKNKPWLL 120

Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSW--YNFNKVAQYKQLTLEEAEE 180
           EDETGQ Q+QGHLEGSQSATYYLL++ GKEF AIPAGSW  YNFNKVA YKQLTLEEAEE
Sbjct: 121 EDETGQSQYQGHLEGSQSATYYLLMMTGKEFVAIPAGSWYVYNFNKVAHYKQLTLEEAEE 180

Query: 181 KMKNRKKTADGYERWMMKAANNGAAAFGEVEKFDDKEGARGGGGRGRRKATGDENEGNAS 240
           KMKNR+KTADGYERWMMKAANNGAAAFGEVEK DDKEG   GG  GRRKA+GD++EGN S
Sbjct: 181 KMKNRRKTADGYERWMMKAANNGAAAFGEVEKVDDKEGVSAGGRGGRRKASGDDDEGNVS 240

Query: 241 DRGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDD 300
           DRGEEDEEEEA RK+RLGLNK+GG  DDD+EGPRGGD DMDDDDIEKGDDWEHEEIFTDD
Sbjct: 241 DRGEEDEEEEAGRKSRLGLNKQGG--DDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDD 300

Query: 301 DETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLN 360
           DE  A D EEREDLAPEVPAPPEIKQ DED+EDEENE EGGLSKSGKELKKLL +  GLN
Sbjct: 301 DEAVAIDPEEREDLAPEVPAPPEIKQ-DEDDEDEENE-EGGLSKSGKELKKLLGKANGLN 360

Query: 361 DSDGEDDDDDDDEEDTGDTPVLPSKQKDTV-KEEAASSSPSKPTPSGSAKGTPSTAKTAK 420
           +SD EDDDDD+D +D   +PVL  KQKD V KEEAA  SP+KPTPSGSAKGTPST+K+AK
Sbjct: 361 ESDVEDDDDDEDMDD-DISPVLAPKQKDVVPKEEAADISPAKPTPSGSAKGTPSTSKSAK 420

Query: 421 GKRK-NGEDVKPSS-APPKKMKTETESKPT--DEALSTSKSTAS-KGAPVSVKTESASNS 480
           GKRK NGED K S+ AP KK+KTE E KP   +E+   +K TA+ K  P S KT S S S
Sbjct: 421 GKRKLNGEDAKSSNGAPVKKVKTENEVKPAVKEESSPATKGTATPKVTPPSSKTGSTSGS 480

Query: 481 -GPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSY 536
            GPVTEEEIRAVL Q  PVTTQDLVA+FK+RLR  EDK AFA+ILRRIS+IQKT+G  +Y
Sbjct: 481 TGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGS-NY 538

BLAST of Cp4.1LG15g01330 vs. TrEMBL
Match: A0A067L7G8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03950 PE=4 SV=1)

HSP 1 Score: 731.1 bits (1886), Expect = 9.8e-208
Identity = 418/542 (77.12%), Postives = 463/542 (85.42%), Query Frame = 1

Query: 1   MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYN 60
           MS DLMLKPSCSGCGST ELYGSNCKHMTLCL+CGKTMAEN+GKCYDCGAT+TRLIREYN
Sbjct: 1   MSFDLMLKPSCSGCGSTQELYGSNCKHMTLCLTCGKTMAENRGKCYDCGATVTRLIREYN 60

Query: 61  VRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGLQGRHLTDALREKYKNRPWVL 120
           VR+S+SSDKNY IGRF++GLP+FSKKK+AENKWSL+K+GLQGR LTDALREKY+N+PW+L
Sbjct: 61  VRASSSSDKNYFIGRFVTGLPSFSKKKSAENKWSLHKDGLQGRQLTDALREKYRNKPWML 120

Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
           EDETGQ Q+QGHLEGSQSATYYLL+LQGKEF AIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQSQYQGHLEGSQSATYYLLILQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 181 KNRKKTADGYERWMMKAANNGAAAFGEVEKFDDKEGARGGGGRGRRKATGDENEGNASDR 240
           KNR+KTADGY+RWMMKAANNGAAAFGEVEKFDDKE    GG  GR+K  GDE EGN SDR
Sbjct: 181 KNRRKTADGYQRWMMKAANNGAAAFGEVEKFDDKESGTAGGKGGRKKPAGDEEEGNVSDR 240

Query: 241 GEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDE 300
            EEDEEEEA RKNRLGLNK+ G  DDD+EG RGGDHDMDDDD EKGDDWEHEEIFTDDDE
Sbjct: 241 AEEDEEEEAARKNRLGLNKRSG--DDDEEGLRGGDHDMDDDDSEKGDDWEHEEIFTDDDE 300

Query: 301 TTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDS 360
               D EEREDLAPEVPAPPEIKQD+ED EDEENE EGGLSKSGKELKKLL +  GLNDS
Sbjct: 301 AVGNDPEEREDLAPEVPAPPEIKQDEED-EDEENE-EGGLSKSGKELKKLLGKAAGLNDS 360

Query: 361 DGEDDDDDDD-EEDTGDTPVLPSKQKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGK 420
           D EDDDDD+D EED   +PVL  KQKD  KEE   +SP+KP PS SAKGTPS +K+AKGK
Sbjct: 361 DAEDDDDDEDMEEDV--SPVLAPKQKDAPKEEPVDNSPAKPMPSSSAKGTPSNSKSAKGK 420

Query: 421 RK-NGEDVKPSS-APPKKMKTETESKPT--DEALSTSKSTAS-KGAPVSVKTESASNSGP 480
           RK +G+D K SS AP KK+K E + KPT  +E   T+KS+ + KGA  S+K  S S   P
Sbjct: 421 RKLSGDDAKTSSGAPQKKVKAENDLKPTVKEEHAPTAKSSPTPKGATSSLKPGSTS---P 480

Query: 481 VTEEEIRAVLRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVL 537
           VTEEEIRAVL Q  PVTTQDLVA+FK+RL+  EDK AFAEILRRIS+IQKT+G  +YVVL
Sbjct: 481 VTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRRISKIQKTSGS-NYVVL 532

BLAST of Cp4.1LG15g01330 vs. TAIR10
Match: AT4G12610.2 (AT4G12610.2 transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors)

HSP 1 Score: 424.1 bits (1089), Expect = 1.3e-118
Identity = 266/403 (66.00%), Postives = 315/403 (78.16%), Query Frame = 1

Query: 146 LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANNGAAAF 205
           +Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAANNG A F
Sbjct: 1   MQNKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPALF 60

Query: 206 GEVEKFDDKEGARGGGGRGRRKAT-GDENEGNASDRGEEDEEEEATRKNRLGLNKKGGGD 265
           GEV+   +  G  GGGGRGR+K++ GDE EGN SDRG+EDEEEEA+RK+RLGLN+K   D
Sbjct: 61  GEVDNEKESGGTSGGGGRGRKKSSGGDEEEGNVSDRGDEDEEEEASRKSRLGLNRK-SND 120

Query: 266 DDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIK 325
           DDD+EGPRGGD DMDDDDIEKGDDWEHEEIFTDDDE    D EERED LAPE+PAPPEIK
Sbjct: 121 DDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLLAPEIPAPPEIK 180

Query: 326 QDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDEEDTGDTPVLPSK 385
           QD++DEE+EE   EGGLSKSGKELKKLL +  GL++SD +DDDD DDEE+T    V  SK
Sbjct: 181 QDEDDEENEEE--EGGLSKSGKELKKLLGKANGLDESDEDDDDDSDDEEETNYGTVTNSK 240

Query: 386 QKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTETE 445
           QK+  KEE   ++P+KP PSG  +GTP  AK +KGKRK  +G+  KPSS+  KK+KTE +
Sbjct: 241 QKEAAKEEPVDNAPAKPAPSGPPRGTP-PAKPSKGKRKLNDGDSKKPSSSVQKKVKTEND 300

Query: 446 SKPT---DEALSTSKST----ASKGAPVSVKTESAS-NSGPVTEEEIRAVLRQRTPVTTQ 505
            K +   + A + SKS     A K  P S    S+S  +GPVTE+EIRAVL ++  VTTQ
Sbjct: 301 PKSSLKEERANTVSKSNTPTKAVKAEPASAPASSSSAATGPVTEDEIRAVLMEKKQVTTQ 360

Query: 506 DLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRK 537
           DLV++FKARL+ KEDKNAFA ILR+IS+IQK  G  ++VVLR+
Sbjct: 361 DLVSRFKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLRE 399

BLAST of Cp4.1LG15g01330 vs. NCBI nr
Match: gi|449468614|ref|XP_004152016.1| (PREDICTED: transcription initiation factor IIF subunit alpha isoform X1 [Cucumis sativus])

HSP 1 Score: 925.6 bits (2391), Expect = 3.9e-266
Identity = 498/540 (92.22%), Postives = 517/540 (95.74%), Query Frame = 1

Query: 1   MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYN 60
           MS DL+LK SCSGCGSTTELYGSNCKHMTLCL+CGKTMAENKGKCYDCGAT+TRLIREYN
Sbjct: 1   MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60

Query: 61  VRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGLQGRHLTDALREKYKNRPWVL 120
           VR+SAS+DKNY IGRFMSGLPNFSKK+NAENKWSLYKEGLQGR L+DALREKYKNRPW+L
Sbjct: 61  VRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120

Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
           EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 181 KNRKKTADGYERWMMKAANNGAAAFGEVEKFDDKEGARGGGGRGRRKATGDENEGNASDR 240
           KNRKKTADGYERWMMKAA+NG AAFGEVEKFDDKE   G  GRGRRK TGDENEGN SDR
Sbjct: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETV-GTSGRGRRKTTGDENEGNVSDR 240

Query: 241 GEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDE 300
           GEEDEEEEA RKNRLGL+KKGGGDDDD+EGPRGGDHD+DDDDIEKGDDWEHEEIFTDDDE
Sbjct: 241 GEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDE 300

Query: 301 TTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDS 360
           TTAPDREEREDLAPEVPAPPEIKQD+ED EDEENEGEGGLSKSGKELKKLLRRTGGLNDS
Sbjct: 301 TTAPDREEREDLAPEVPAPPEIKQDEED-EDEENEGEGGLSKSGKELKKLLRRTGGLNDS 360

Query: 361 DGEDDDDDDD-EEDTGDTPVLPSKQKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGK 420
           DGEDDDDDDD +EDTG TPVLPSKQKDTVKEEAA++SPSKPTPSGSAKGTPSTAKTAKGK
Sbjct: 361 DGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGK 420

Query: 421 RKNGEDVKPSSAPPKKMKTETESKPTDEALSTSKSTASKGAPVSVKTESASNSGPVTEEE 480
           RKNGEDVKPSSAPPKKMKTETESK TDE + TSKSTASKGAP SVKTE +S+SGPVTEEE
Sbjct: 421 RKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEE 480

Query: 481 IRAVLRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 540
           IRAVLRQRTPVTTQDLVAKFKARLR  EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Sbjct: 481 IRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 538

BLAST of Cp4.1LG15g01330 vs. NCBI nr
Match: gi|778682069|ref|XP_011651640.1| (PREDICTED: transcription initiation factor IIF subunit alpha isoform X2 [Cucumis sativus])

HSP 1 Score: 781.2 bits (2016), Expect = 1.2e-222
Identity = 430/464 (92.67%), Postives = 444/464 (95.69%), Query Frame = 1

Query: 77  MSGLPNFSKKKNAENKWSLYKEGLQGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGS 136
           MSGLPNFSKK+NAENKWSLYKEGLQGR L+DALREKYKNRPW+LEDETGQFQFQGHLEGS
Sbjct: 1   MSGLPNFSKKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGS 60

Query: 137 QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 196
           QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK
Sbjct: 61  QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 120

Query: 197 AANNGAAAFGEVEKFDDKEGARGGGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLG 256
           AA+NG AAFGEVEKFDDKE   G  GRGRRK TGDENEGN SDRGEEDEEEEA RKNRLG
Sbjct: 121 AASNGPAAFGEVEKFDDKETV-GTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLG 180

Query: 257 LNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEV 316
           L+KKGGGDDDD+EGPRGGDHD+DDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEV
Sbjct: 181 LSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEV 240

Query: 317 PAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDD-EEDTG 376
           PAPPEIKQD+ED EDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDD +EDTG
Sbjct: 241 PAPPEIKQDEED-EDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTG 300

Query: 377 DTPVLPSKQKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKK 436
            TPVLPSKQKDTVKEEAA++SPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKK
Sbjct: 301 GTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKK 360

Query: 437 MKTETESKPTDEALSTSKSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDL 496
           MKTETESK TDE + TSKSTASKGAP SVKTE +S+SGPVTEEEIRAVLRQRTPVTTQDL
Sbjct: 361 MKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDL 420

Query: 497 VAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 540
           VAKFKARLR  EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Sbjct: 421 VAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 462

BLAST of Cp4.1LG15g01330 vs. NCBI nr
Match: gi|659092993|ref|XP_008447327.1| (PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIF subunit alpha [Cucumis melo])

HSP 1 Score: 777.3 bits (2006), Expect = 1.7e-221
Identity = 428/464 (92.24%), Postives = 442/464 (95.26%), Query Frame = 1

Query: 77  MSGLPNFSKKKNAENKWSLYKEGLQGRHLTDALREKYKNRPWVLEDETGQFQFQGHLEGS 136
           MSGLPNFSKK+NAENKWSLYKEGLQGR LTDALREKYKNRPW+LEDETGQFQFQGHLEGS
Sbjct: 1   MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGS 60

Query: 137 QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 196
           QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAE KMKNRKKTADGYERWMMK
Sbjct: 61  QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEXKMKNRKKTADGYERWMMK 120

Query: 197 AANNGAAAFGEVEKFDDKEGARGGGGRGRRKATGDENEGNASDRGEEDEEEEATRKNRLG 256
           AA+NG AAFGEVEKFDDKE   G  GRGRRK TGDENEGN SDRGEEDEEEEA RKNRLG
Sbjct: 121 AASNGPAAFGEVEKFDDKETV-GTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLG 180

Query: 257 LNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEV 316
           L+KKGGGDDDD+EGPRGGDHD+DDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEV
Sbjct: 181 LSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEV 240

Query: 317 PAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDD-EEDTG 376
           PAPPEIKQD+ED EDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDD +EDTG
Sbjct: 241 PAPPEIKQDEED-EDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTG 300

Query: 377 DTPVLPSKQKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKK 436
            TPVLPSKQKDTVKEEAA++SPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKK
Sbjct: 301 GTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKK 360

Query: 437 MKTETESKPTDEALSTSKSTASKGAPVSVKTESASNSGPVTEEEIRAVLRQRTPVTTQDL 496
           MKTETE KPTDE + TSKSTASKGAP SVKTE +S+SGPVTEEEIRAVLRQRTPVTTQDL
Sbjct: 361 MKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDL 420

Query: 497 VAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 540
           VAKFKARLR  EDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Sbjct: 421 VAKFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED 462

BLAST of Cp4.1LG15g01330 vs. NCBI nr
Match: gi|731439312|ref|XP_002262798.3| (PREDICTED: transcription initiation factor IIF subunit alpha [Vitis vinifera])

HSP 1 Score: 736.1 bits (1899), Expect = 4.4e-209
Identity = 411/542 (75.83%), Postives = 468/542 (86.35%), Query Frame = 1

Query: 1   MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYN 60
           MS DLMLKPSCSGCGSTT+LYGSNCKHMTLCLSCGKTMAEN GKCYDCG  +TRLIREYN
Sbjct: 1   MSFDLMLKPSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLIREYN 60

Query: 61  VRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGLQGRHLTDALREKYKNRPWVL 120
           VR+++S DKNY IGRF++GLP FSKKKNA+NKWSL+KEGLQGR ++DALREKYKN+PW+L
Sbjct: 61  VRTNSSGDKNYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLL 120

Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
           EDETGQ+Q+ G LEGSQSATYYLL++QGKEF AIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 181 KNRKKTADGYERWMMKAANNGAAAFGEVEKFDDKE-GARGGGGRGRRKATGDENEGNASD 240
           KNR++TADGY+RWMMKAANNG AAFGEVEK DDKE G   GGGRGR+K TGDE EGN SD
Sbjct: 181 KNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSD 240

Query: 241 RGEEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDD 300
           + EEDEEEEA RKNRLGLNK+ G  DDD+EGPRGGDHD+DDDDIEKGDDWEHEEIFTDDD
Sbjct: 241 KAEEDEEEEAERKNRLGLNKRSG--DDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDD 300

Query: 301 ETTAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLND 360
           E    D EEREDLAPEVPAPPEIKQD+ED ED+ NE EGGLSKSGKELKKLL +  G+ND
Sbjct: 301 EAVGNDPEEREDLAPEVPAPPEIKQDEED-EDDSNEEEGGLSKSGKELKKLLGKAAGMND 360

Query: 361 SDGEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGK 420
           SD EDDDDD++E++ G +PVL  KQKD  KEE A +SP K + + SA+ TP T+K++KGK
Sbjct: 361 SDAEDDDDDEEEDEIGLSPVLAPKQKDVPKEEPADNSPMK-SATASARSTPPTSKSSKGK 420

Query: 421 RK-NGEDVKPSS-APPKKMKTETESKPT--DEALSTSKSTAS-KGAP-VSVKTESASNSG 480
           RK NG+D+K ++  PPKK+KTE ESK +  DE  S SK TA+ KG P  SVKT S S++G
Sbjct: 421 RKSNGDDMKTTNGGPPKKVKTENESKSSAKDEGPSPSKVTATPKGTPSSSVKTGSTSSAG 480

Query: 481 PVTEEEIRAVLRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVV 536
           PVTE+EIRAVL Q+ PVTTQDLVAKFKARL+ +EDK AFA+ILRRIS+IQKTN GP+YVV
Sbjct: 481 PVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTN-GPNYVV 537

BLAST of Cp4.1LG15g01330 vs. NCBI nr
Match: gi|255556707|ref|XP_002519387.1| (PREDICTED: transcription initiation factor IIF subunit alpha [Ricinus communis])

HSP 1 Score: 734.9 bits (1896), Expect = 9.7e-209
Identity = 420/540 (77.78%), Postives = 466/540 (86.30%), Query Frame = 1

Query: 2   SLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYNV 61
           ++DLMLK SCSGCGSTT+LYGSNCKHMTLCLSCGKTMAEN  KC+DCGAT++RLIREYNV
Sbjct: 3   TMDLMLKGSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHAKCFDCGATVSRLIREYNV 62

Query: 62  RSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGLQGRHLTDALREKYKNRPWVLE 121
           R+S+SSDKNY IGRF++GLP+FSKKKNAENKWSL KEGLQGR LTDALREKYKNRPW+LE
Sbjct: 63  RASSSSDKNYFIGRFVTGLPSFSKKKNAENKWSLQKEGLQGRQLTDALREKYKNRPWLLE 122

Query: 122 DETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 181
           DETGQFQ+QGHLEGSQSATYYLL+LQGKEF AIPA SWYNFNKVAQYKQLTLEEAEEKM+
Sbjct: 123 DETGQFQYQGHLEGSQSATYYLLILQGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEKMR 182

Query: 182 NRKKTADGYERWMMKAANNGAAAFGEVEKFDDKEGARGGGGRGRRKATGDENEGNASDRG 241
           NR+KTADGYERWMMKAANNG AAFGEVEK DDK+      GRGR+KA GD+ EGN SDRG
Sbjct: 183 NRRKTADGYERWMMKAANNGPAAFGEVEKLDDKDSG-AASGRGRKKAAGDDEEGNVSDRG 242

Query: 242 EEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDET 301
           +EDEEEEA RKNRLGLNK+GG  DDD+EGPRGGDHD+DDDDIEKGDDWEHEEIFTDDDE 
Sbjct: 243 DEDEEEEAARKNRLGLNKRGG--DDDEEGPRGGDHDIDDDDIEKGDDWEHEEIFTDDDEA 302

Query: 302 TAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSD 361
              DREEREDLAPEVPAPPEIKQ DED+EDEENE EGGLSKSGKELKKLL R GGLNDSD
Sbjct: 303 VGNDREEREDLAPEVPAPPEIKQ-DEDDEDEENE-EGGLSKSGKELKKLLGRAGGLNDSD 362

Query: 362 GEDDDDDDD-EEDTGDTPVLPSKQKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGKR 421
            EDDDDDDD +ED   +PVL  KQ  T KEE A +SP+KP  S S+KGTPST+K+AKGKR
Sbjct: 363 AEDDDDDDDMDEDVSISPVLAPKQ--TPKEEPADNSPAKPMTSASSKGTPSTSKSAKGKR 422

Query: 422 K-NGEDVKPSS-APPKKMKTETESKPT--DEALSTSKSTAS-KGAPVSVKTESASNSGPV 481
           K N ++ K ++ AP KK+KTE E KPT  +E+  TSKS+A+ K AP S KT S S   PV
Sbjct: 423 KLNSDEAKQTNVAPQKKVKTENELKPTVKEESAPTSKSSATPKAAPPSAKTGSTS---PV 482

Query: 482 TEEEIRAVLRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLR 536
           TEEEIRAVL Q  PVTTQDLVA+FK+RL+  EDK AFA+ILRRIS+IQKT+G  SYVVLR
Sbjct: 483 TEEEIRAVLLQNGPVTTQDLVARFKSRLKSSEDKKAFADILRRISKIQKTSGS-SYVVLR 531

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
T2FA_ARATH2.7e-18267.34Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP... [more]
T2FA_DICDI8.4e-1125.34General transcription factor IIF subunit 1 OS=Dictyostelium discoideum GN=gtf2f1... [more]
Match NameE-valueIdentityDescription
A0A0A0LCA6_CUCSA2.7e-26692.22Uncharacterized protein OS=Cucumis sativus GN=Csa_3G624050 PE=4 SV=1[more]
D7TRJ8_VITVI3.0e-20975.83Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0187g00350 PE=4 SV=... [more]
B9S068_RICCO6.8e-20977.78Tfiif-alpha, putative OS=Ricinus communis GN=RCOM_1299530 PE=4 SV=1[more]
B9IH94_POPTR7.5e-20877.57Transcription initiation factor IIF alpha subunit family protein OS=Populus tric... [more]
A0A067L7G8_JATCU9.8e-20877.12Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03950 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G12610.21.3e-11866.00 transcription activators;DNA binding;RNA polymerase II transcription... [more]
Match NameE-valueIdentityDescription
gi|449468614|ref|XP_004152016.1|3.9e-26692.22PREDICTED: transcription initiation factor IIF subunit alpha isoform X1 [Cucumis... [more]
gi|778682069|ref|XP_011651640.1|1.2e-22292.67PREDICTED: transcription initiation factor IIF subunit alpha isoform X2 [Cucumis... [more]
gi|659092993|ref|XP_008447327.1|1.7e-22192.24PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIF subunit alph... [more]
gi|731439312|ref|XP_002262798.3|4.4e-20975.83PREDICTED: transcription initiation factor IIF subunit alpha [Vitis vinifera][more]
gi|255556707|ref|XP_002519387.1|9.7e-20977.78PREDICTED: transcription initiation factor IIF subunit alpha [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0032968positive regulation of transcription elongation from RNA polymerase II promoter
GO:0006367transcription initiation from RNA polymerase II promoter
GO:0015979photosynthesis
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0016021integral component of membrane
GO:0009579thylakoid
GO:0009522photosystem I
Vocabulary: INTERPRO
TermDefinition
IPR011991Winged helix-turn-helix DNA-binding domain
IPR011039TFIIF_interaction
IPR008851TFIIF-alpha
IPR001280PSI_PsaA/B
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015979 photosynthesis
biological_process GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter
biological_process GO:0016125 sterol metabolic process
biological_process GO:0048316 seed development
biological_process GO:0030259 lipid glycosylation
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0006413 translational initiation
biological_process GO:0006367 transcription initiation from RNA polymerase II promoter
cellular_component GO:0009522 photosystem I
cellular_component GO:0005840 ribosome
cellular_component GO:0005634 nucleus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009579 thylakoid
molecular_function GO:0003824 catalytic activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0008022 protein C-terminus binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0051507 beta-sitosterol UDP-glucosyltransferase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g01330.1Cp4.1LG15g01330.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001280Photosystem I PsaA/PsaBGENE3DG3DSA:1.20.1130.10coord: 41..107
score: 4.
IPR008851Transcription initiation factor IIF, alpha subunitPFAMPF05793TFIIF_alphacoord: 48..535
score: 8.9E
IPR011039Transcription Factor IIF, Rap30/Rap74, interactionunknownSSF50916Rap30/74 interaction domainscoord: 53..183
score: 4.97
IPR011991Winged helix-turn-helix DNA-binding domainGENE3DG3DSA:1.10.10.10coord: 468..535
score: 5.7
IPR011991Winged helix-turn-helix DNA-binding domainunknownSSF46785"Winged helix" DNA-binding domaincoord: 468..535
score: 1.22
NoneNo IPR availablePANTHERPTHR13011TFIIF-ALPHAcoord: 221..539
score: 4.4E-163coord: 1..204
score: 4.4E
NoneNo IPR availablePANTHERPTHR13011:SF0GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 1coord: 221..539
score: 4.4E-163coord: 1..204
score: 4.4E

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG15g01330Cp4.1LG05g00750Cucurbita pepo (Zucchini)cpecpeB273
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG15g01330Cucumber (Gy14) v2cgybcpeB341
Cp4.1LG15g01330Melon (DHL92) v3.6.1cpemedB283
Cp4.1LG15g01330Silver-seed gourdcarcpeB0124
Cp4.1LG15g01330Silver-seed gourdcarcpeB0332
Cp4.1LG15g01330Silver-seed gourdcarcpeB1329
Cp4.1LG15g01330Cucumber (Chinese Long) v3cpecucB0308
Cp4.1LG15g01330Cucurbita pepo (Zucchini)cpecpeB155
Cp4.1LG15g01330Cucurbita pepo (Zucchini)cpecpeB258
Cp4.1LG15g01330Cucurbita pepo (Zucchini)cpecpeB265
Cp4.1LG15g01330Cucurbita pepo (Zucchini)cpecpeB284
Cp4.1LG15g01330Cucurbita moschata (Rifu)cmocpeB848