Cp4.1LG15g01240 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAGTATTTTTATTTATTTATTATTATTATTTTTTTTTTACATAAAATATTCAAGGACATTATTATTAATTTATTGAATTTTATAAAATAGAATTTATATTATCGTACAAATACAATTTTTTTAAAGATTTCTGGACTGGGTGCGAAGTTGCTGTTCGATTCTCCAATGGCGGGGAAGGAGAATCTGAAGATTATTACAGACAAGAACCAGATGCGGACATGGACGAGGGCCATGAGATCGCAAGGCAAAACCATCGCCCTCGTTCCCACCATGGGATTCCTCCACGACGGCCATCTCTCCCTAATCGAAGAAGCTCACAAGCACACACACCTCGTTGTGGTCTCAATCTACGTTAACCCTAGCCAATTCGCCCCTTCCGAGGATCTCTCCACCTATCCTTCTGATTTCGACGGCGACATTCGGAAGCTCATGGCTGTTCCTGGAGGTGTTGATGCGGTTTTTCATCCTTACAATCTCTACGATTATGGAGTAGAATCAGCTCGTTGCGGAAATAGCGGCGTATCTAATGGAACGGCGGTGGTTTCTTGCTTGGAGGAGTCTGGATCAGGGCATGAGACATGGGTGAGGGTCGAGCGTTTGGAGAAGGGGATGTGTGGGATAAGAAGGCCTGTTTTCTTCAGAGGAGTTGCTACCATTGTTGCTAAGTTGTTCAATATTGTGGAGCCTGATGTTGCTGTGTTTGGGAAGAAGGATTATCAGCAATGGCGGATTATCAGGCGGATGGTGAGTTTCTCTGCAAGAGGGTGAATGGTTTTGATTTTGATATCTGTTTAGAGCTCAAAACTCATTGTTTATCATCTGAATTTGATTGCTTAATTCTAAGATTTATAAACTTAATTTGCATTCCTCGTCTTAGGGTACTAAATCTTGCATGTTTGCTAAACTATATTCAAAATTCGAAAAGCTGCTTCGATCAATACCGTTAGATGAACCGGTAGTTAAGTTCTCAAGAATGCTAAATCTTGCATGTTAGGAACCACGAACCTCCACAATGGTATGATATTGTCCATTTTGAGTATAAGCTCTCATAGTTGTACTTTTGGTTTCTCCAAAAGGCCTCATACCGATGGAGATTGTATTCCTTACTTATAAACTCATGATCATTCTTTAAATTAGCTAACGTGGACTCCCTCCCAATAGGGTATGACTTAAATTCCTGTCCCTCGAAGTTCATTTAGTTCTGATCTCGATGGTTAAAGTTTGGGTTGGGCAACAAGCCTCTTGGATGATATATGTTGCTCTAACTTCTTGCCTTATCATCTTTTGTTCTAGATTTCCACAAGTTATTGGGTGTTTACCCACATTTATAATCATTTGATTGAGATAGGCATATGTTTATTACCTCTGGTGGTAATGATTCTCACATCAACTCTTTTCCAGGTTCGAGATCTTGATTTTTCTATAAACATTGTGGGGTCTGAAATCATGCGCGATGTCGATGGTCTTGCAATGAGTTCGCGCAATGTCGGGCTCTCACTTGAAGAAAGACAAAAGGTTCTCTCCTTCACTGTTCTATCTACTTCTGTTCAAATTATGGTGTAGTAGTGTCTTCAATGTGCAAAGCATATTGGCTTTGTTGTTCATGATAGAATGATTACTTAGATTCAGAAACTGATTTACGTCTACGTCTTTCGTTTATAGGCATTGTCTATAAACAGGTCATTGTCAAAAGCAAAATCAGCCGCAGAAAGAGGTGAACTTAATTGCAAAAGCTTAAAGAGCTTGGTTGTCGATGAAATACGGGAAGCCGGTGGAGAACTTGATTACGTTGAGGTGAGCCCTAGATGATTTAAATATGAAGTCTGTAAAAGCCCAAGCCCACCGCTAGTAGATATTGTCCTCTTTGGACTTTCCCTTGAGGTTTTTAAAACACGTATGCTAGAGAGAGGTTTTCAAAACACGTATGCTAGAGAGAGGTTTTCAAAACACGTATGCTAGAGAGAGGTTTTCACACCCTTATAAAGAATGTTTTGTTCTCCTTCCCAACCGATGTGGGATCTCACAATCCACACCCCCTTTTAGGGTCCAACGTCCTTGTTGGCACTCGTTTTTAGTTCTAATACCATTTGTAGCTCAAGCCCACTGCTAGCAAACATTGTTCTCTTTGAGCTTTCCCTTTCGGGCTTTCCTTAAAGATTTTTAAAACGCGTTTACTTAGGGTGAGTTTTCCACACGTTTAATGTTTCGTTCTCCTCCCTGACCGATGTGGGATCTCACAAAGTCTTTCTGACTTAAGCCTATAATAAGCTTTTGATGTTCTGTTTGTAACATTGTGCAGCCTTTCAACTTAGTTAAGAGAGAGTGTGGAGTTGTAGCCTGTCTTTTTCATGGTTTTATTGTCTTTTTCATGAAAGGGGCTGTTTCTTGCTTCCGTTTTCCAAACTATTTTTGAAGACTGATAATGGGGCTGCTGAAAAGTAAATATGCATATGAATGAAATCATGGTTTGCTACTTGTCCATGTTTTTGGAAGGAAAAACAACTTCAATTCTCCTCCGAGTGAGGTTTTGTCGTGTATTCCATTCAAATTATCTCCATAGGCATCTGTAACTAAGTTTCTTTTTTTTTTATTCACCTGGTCTTATTTTGCTCGACTGGAGACTTTTTTCTCTCTAGATTGTGTGAGATCCCACATTGATAGGAGAGGGGAACGAGTACCAACGAGGACGCTGGGCTCCGAAAGGGGGTGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGAAGCGAAACATTTATTGTAAGAGTGTGAAAATCTCCCCTATAAGATGCATTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATATGCTAACGGTGGGACTTGGGCTGTTATAGATTGCTTCCCTTTTTTTTGTGAGCATTCTCTTTTGTCGGCCTTTTTAGTATTTTTCTCAATGAAAGTTCAACAATTCATTAAAATAAAAAACTTCAATTCTTCTCAAAACGAGAATTGGAAACATGGTATTCAACGTAATGTTATTCGTTATCCAAACACGTATCTGCTGAATTTAACAGTAAGTTTCATATGGTTTTTGTTGGCGACAGATTGTGGAACAAGAGAGTTTGGAGGTGGTGGAGGAGATCAAGAGTCCAGTTGTGATCTTGATAGCTGCCTGGTTTGGCAAAGTAAGGCTCATAGACAACATTGAAATAAGCATTTGAATATTTAGTTACTTCTCCTTCCTTCCTTCTGATCATCTTTTTGTACTTATTTTAGTGTTTCCGAGCTATGAGGCTTACACGTATTCGCTTAGTGTGTTTGAATAAATAGGTCGAGGTTTAGTGTGTTTGAATAAATAGGTCGAAGTTTAGGTAAACCGGCCCATATTTCATGTAAGACTGATAGCATAAGAACTTTAAACCACTTAAATAGTCCAAACTCAAGGCTCCCCAATGGAGAGCAAAAGAATAAAGAGAAGTCTCATTATTTTATGTCATTTGAATGCACTAGTTCTTTTGTACGTTATTGCCTAATATTCGA ATGGTAATTTCTGGACTGGGTGCGAAGTTGCTGTTCGATTCTCCAATGGCGGGGAAGGAGAATCTGAAGATTATTACAGACAAGAACCAGATGCGGACATGGACGAGGGCCATGAGATCGCAAGGCAAAACCATCGCCCTCGTTCCCACCATGGGATTCCTCCACGACGGCCATCTCTCCCTAATCGAAGAAGCTCACAAGCACACACACCTCGTTGTGGTCTCAATCTACGTTAACCCTAGCCAATTCGCCCCTTCCGAGGATCTCTCCACCTATCCTTCTGATTTCGACGGCGACATTCGGAAGCTCATGGCTGTTCCTGGAGGTGTTGATGCGGTTTTTCATCCTTACAATCTCTACGATTATGGAGTAGAATCAGCTCGTTGCGGAAATAGCGGCGTATCTAATGGAACGGCGGTGGTTTCTTGCTTGGAGGAGTCTGGATCAGGGCATGAGACATGGGTGAGGGTCGAGCGTTTGGAGAAGGGGATGTGTGGGATAAGAAGGCCTGTTTTCTTCAGAGGAGTTGCTACCATTGTTGCTAAGTTGTTCAATATTGTGGAGCCTGATGTTGCTGTGTTTGGGAAGAAGGATTATCAGCAATGGCGGATTATCAGGCGGATGGTTCGAGATCTTGATTTTTCTATAAACATTGTGGGGTCTGAAATCATGCGCGATGTCGATGGTCTTGCAATGAGTTCGCGCAATGTCGGGCTCTCACTTGAAGAAAGACAAAAGGCATTGTCTATAAACAGGTCATTGTCAAAAGCAAAATCAGCCGCAGAAAGAGGTGAACTTAATTGCAAAAGCTTAAAGAGCTTGATTGTGGAACAAGAGAGTTTGGAGGTGGTGGAGGAGATCAAGAGTCCAGTTGTGATCTTGATAGCTGCCTGGTTTGGCAAAGTAAGGCTCATAGACAACATTGAAATAAGCATTTGAATATTTAGTTACTTCTCCTTCCTTCCTTCTGATCATCTTTTTGTACTTATTTTAGTGTTTCCGAGCTATGAGGCTTACACGTATTCGCTTAGTGTGTTTGAATAAATAGGTCGAGGTTTAGTGTGTTTGAATAAATAGGTCGAAGTTTAGGTAAACCGGCCCATATTTCATGTAAGACTGATAGCATAAGAACTTTAAACCACTTAAATAGTCCAAACTCAAGGCTCCCCAATGGAGAGCAAAAGAATAAAGAGAAGTCTCATTATTTTATGTCATTTGAATGCACTAGTTCTTTTGTACGTTATTGCCTAATATTCGA ATGGTAATTTCTGGACTGGGTGCGAAGTTGCTGTTCGATTCTCCAATGGCGGGGAAGGAGAATCTGAAGATTATTACAGACAAGAACCAGATGCGGACATGGACGAGGGCCATGAGATCGCAAGGCAAAACCATCGCCCTCGTTCCCACCATGGGATTCCTCCACGACGGCCATCTCTCCCTAATCGAAGAAGCTCACAAGCACACACACCTCGTTGTGGTCTCAATCTACGTTAACCCTAGCCAATTCGCCCCTTCCGAGGATCTCTCCACCTATCCTTCTGATTTCGACGGCGACATTCGGAAGCTCATGGCTGTTCCTGGAGGTGTTGATGCGGTTTTTCATCCTTACAATCTCTACGATTATGGAGTAGAATCAGCTCGTTGCGGAAATAGCGGCGTATCTAATGGAACGGCGGTGGTTTCTTGCTTGGAGGAGTCTGGATCAGGGCATGAGACATGGGTGAGGGTCGAGCGTTTGGAGAAGGGGATGTGTGGGATAAGAAGGCCTGTTTTCTTCAGAGGAGTTGCTACCATTGTTGCTAAGTTGTTCAATATTGTGGAGCCTGATGTTGCTGTGTTTGGGAAGAAGGATTATCAGCAATGGCGGATTATCAGGCGGATGGTTCGAGATCTTGATTTTTCTATAAACATTGTGGGGTCTGAAATCATGCGCGATGTCGATGGTCTTGCAATGAGTTCGCGCAATGTCGGGCTCTCACTTGAAGAAAGACAAAAGGCATTGTCTATAAACAGGTCATTGTCAAAAGCAAAATCAGCCGCAGAAAGAGGTGAACTTAATTGCAAAAGCTTAAAGAGCTTGATTGTGGAACAAGAGAGTTTGGAGGTGGTGGAGGAGATCAAGAGTCCAGTTGTGATCTTGATAGCTGCCTGGTTTGGCAAAGTAAGGCTCATAGACAACATTGAAATAAGCATTTGA MVISGLGAKLLFDSPMAGKENLKIITDKNQMRTWTRAMRSQGKTIALVPTMGFLHDGHLSLIEEAHKHTHLVVVSIYVNPSQFAPSEDLSTYPSDFDGDIRKLMAVPGGVDAVFHPYNLYDYGVESARCGNSGVSNGTAVVSCLEESGSGHETWVRVERLEKGMCGIRRPVFFRGVATIVAKLFNIVEPDVAVFGKKDYQQWRIIRRMVRDLDFSINIVGSEIMRDVDGLAMSSRNVGLSLEERQKALSINRSLSKAKSAAERGELNCKSLKSLIVEQESLEVVEEIKSPVVILIAAWFGKVRLIDNIEISI
BLAST of Cp4.1LG15g01240 vs. Swiss-Prot
Match: PANC_LOTJA (Pantoate--beta-alanine ligase OS=Lotus japonicus GN=PANC PE=1 SV=3) HSP 1 Score: 399.8 bits (1026), Expect = 2.7e-110 Identity = 203/310 (65.48%), Postives = 245/310 (79.03%), Query Frame = 1
BLAST of Cp4.1LG15g01240 vs. Swiss-Prot
Match: PANC_ARATH (Pantoate--beta-alanine ligase OS=Arabidopsis thaliana GN=At5g48840 PE=1 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 2.1e-107 Identity = 202/306 (66.01%), Postives = 238/306 (77.78%), Query Frame = 1
BLAST of Cp4.1LG15g01240 vs. Swiss-Prot
Match: PANC_ORYSJ (Pantoate--beta-alanine ligase OS=Oryza sativa subsp. japonica GN=PANC PE=2 SV=2) HSP 1 Score: 362.8 bits (930), Expect = 3.6e-99 Identity = 200/316 (63.29%), Postives = 235/316 (74.37%), Query Frame = 1
BLAST of Cp4.1LG15g01240 vs. Swiss-Prot
Match: PANC_THESQ (Pantothenate synthetase OS=Thermotoga sp. (strain RQ2) GN=panC PE=3 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 4.5e-57 Identity = 131/303 (43.23%), Postives = 177/303 (58.42%), Query Frame = 1
BLAST of Cp4.1LG15g01240 vs. Swiss-Prot
Match: PANC_THEP1 (Pantothenate synthetase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=panC PE=3 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 7.7e-57 Identity = 131/303 (43.23%), Postives = 177/303 (58.42%), Query Frame = 1
BLAST of Cp4.1LG15g01240 vs. TrEMBL
Match: A0A0A0LBL8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G625640 PE=3 SV=1) HSP 1 Score: 439.9 bits (1130), Expect = 2.6e-120 Identity = 241/317 (76.03%), Postives = 252/317 (79.50%), Query Frame = 1
BLAST of Cp4.1LG15g01240 vs. TrEMBL
Match: F6HZY6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g05780 PE=3 SV=1) HSP 1 Score: 431.8 bits (1109), Expect = 7.1e-118 Identity = 222/308 (72.08%), Postives = 252/308 (81.82%), Query Frame = 1
BLAST of Cp4.1LG15g01240 vs. TrEMBL
Match: M5VKJ0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008786mg PE=3 SV=1) HSP 1 Score: 430.6 bits (1106), Expect = 1.6e-117 Identity = 225/324 (69.44%), Postives = 260/324 (80.25%), Query Frame = 1
BLAST of Cp4.1LG15g01240 vs. TrEMBL
Match: A0A059AVS4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00804 PE=3 SV=1) HSP 1 Score: 422.5 bits (1085), Expect = 4.3e-115 Identity = 213/305 (69.84%), Postives = 247/305 (80.98%), Query Frame = 1
BLAST of Cp4.1LG15g01240 vs. TrEMBL
Match: A0A067K3L9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17562 PE=3 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 1.3e-114 Identity = 218/311 (70.10%), Postives = 250/311 (80.39%), Query Frame = 1
BLAST of Cp4.1LG15g01240 vs. TAIR10
Match: AT5G48840.1 (AT5G48840.1 homolog of bacterial PANC) HSP 1 Score: 390.2 bits (1001), Expect = 1.2e-108 Identity = 202/306 (66.01%), Postives = 238/306 (77.78%), Query Frame = 1
BLAST of Cp4.1LG15g01240 vs. NCBI nr
Match: gi|778682111|ref|XP_004152022.2| (PREDICTED: LOW QUALITY PROTEIN: pantoate--beta-alanine ligase [Cucumis sativus]) HSP 1 Score: 482.3 bits (1240), Expect = 6.6e-133 Identity = 259/321 (80.69%), Postives = 269/321 (83.80%), Query Frame = 1
BLAST of Cp4.1LG15g01240 vs. NCBI nr
Match: gi|659130281|ref|XP_008465087.1| (PREDICTED: pantoate--beta-alanine ligase [Cucumis melo]) HSP 1 Score: 471.1 bits (1211), Expect = 1.5e-129 Identity = 254/315 (80.63%), Postives = 266/315 (84.44%), Query Frame = 1
BLAST of Cp4.1LG15g01240 vs. NCBI nr
Match: gi|778716155|ref|XP_004140085.2| (PREDICTED: LOW QUALITY PROTEIN: pantoate--beta-alanine ligase-like [Cucumis sativus]) HSP 1 Score: 450.7 bits (1158), Expect = 2.1e-123 Identity = 242/314 (77.07%), Postives = 257/314 (81.85%), Query Frame = 1
BLAST of Cp4.1LG15g01240 vs. NCBI nr
Match: gi|700203216|gb|KGN58349.1| (hypothetical protein Csa_3G625640 [Cucumis sativus]) HSP 1 Score: 439.9 bits (1130), Expect = 3.8e-120 Identity = 241/317 (76.03%), Postives = 252/317 (79.50%), Query Frame = 1
BLAST of Cp4.1LG15g01240 vs. NCBI nr
Match: gi|731396385|ref|XP_002266330.2| (PREDICTED: pantoate--beta-alanine ligase [Vitis vinifera]) HSP 1 Score: 431.8 bits (1109), Expect = 1.0e-117 Identity = 222/308 (72.08%), Postives = 252/308 (81.82%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|