Cp4.1LG15g01230 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG15g01230
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Pectate lyase
Location	Cp4.1LG15 : 968547 .. 974601 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTCCCGGTTTTGCTTCCCATTCAATTCCCTCTCTTTCGTTTCACAACTACTCGCATTTAACGCTCTCATACAAATCCCACAGATCGAGCGATCGAGAGATACAATACACAGTCGCTTAAAATTTTTTCGGAGAAGCAGAGAAAGCTTCAGAATCATCAATAATGGCGGTCACTCTTAGACTACAGTTTTCAACCGCTTCATTAATGTTCTTCCTTCTTCTCAACATCCTCTTCGTTCAATCCAGGTAAATGCTTCCTAATCGCGTCATTTCTCTGCGTTTTCGACAATAATGCCGTCGCGTCCGCCGCTACCGACGGCCTAAACTAGCGTAGTCTTGTTCGGAGTAATTTGTTGAATGTTGATCTTGATTTTTCTCATTTTTTGTTTCGTTTCACAATGTTGATAGTTTTGCTGGAGATCAGCGATTACAGAGCTTTAATTCTTCATCCATGGCGGACAGGTCAGTTTCCGAAACTAGACCTTCTCTGTTCTGAGTAATTTTTGAATGATTTTCTTGATTGTTCTCATTTTCTGTTTCGCTTCACAATGTTGATAGTTTTGCTGGAGATCAGCGATTGCAGAGCTTTAATTCTTCATCCATGGCGGACAGGTCAGTTTCCGAAACTAGACCTTCTCTGTTCTGAGTAATTTTTGAATGATTTTCTTGATTGTTCTCATTTTCTGTTTCGCTTCACAATGTTGATAGTTTTTCTGGAGATCAGAGACTGCAGAGCTTCAATTCTTCATCCATGGCGGACCGGTCAGTTTCCGAAACTAGACCTTCTCTGTTATTTTTCCCCCAATTTTTCTCTTCGTTTTCCGGCACATGATCTTCACGTGTCGATTTTATAAAAAACTTCATAAACTCTGAGAAAAATTATGGAAAACTAAATAATTTTACAATTTAAAATTAATTAAAATGCTAATTATTTTTATTATTAGTAGTATTAAAGGCATTTTGTTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNAATATTATAATGTAAATTTTATACTCTAGGTCGAAAGCGTAATTTAGGCCGTCAGATATATCAAACGGATCAGAAAATTGGAATTTTGAGATCGGATCAGGAAAATCTGGGCCGTTCATTCGTAGATTAAAACAAAAAAAAGAGGTCACAGAGTGTCTATATTAAGTACTTTCTTTGACTCTTTATTGACAAATTTACCCTTCGACATTCCATTTCAACCCTGGCCTAATTTTGGACCTTTTGGTCAATGGCCATTTTCACTTCCACGTGTACATTTCTTTTTCTCAGATTTGAATCTAACTTTCAAGAGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAAAAAATCTTTAAATACATAAATTAAATAATTCATTAAAACATATGGAACAGCCTTCCACCGACCAAGAGCTTAATAATAATAATATTATTATTTTGTTTCGATAATAAACTGAGATATTTTAATTATGTAATTAAATAAATATTTGTTTAATTGAAAATTTCAGGTATGTTAAGAATGAGCATGCCGTTGATAATCCAGAGGAAATTGCATCAATGGTGGATTTGTAAGATTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAATATTTATTTATGGGGCCAAATGAATAATTAAAAATGATTATTAATAATAAAAATGGAATTTGCTTTCGATTAGCATGTGACTTCTTTTACTCCAAGTATGCTGTTTTGATGCAAATCTGAAGTTTTAAATAAGTGTTAGAATGCGAAAATGACTTAAATAATAAGTAATTGATAGATTTAGTTTTTTTTTTTTAATTTTTTTTTATATTTAATTTATGAACTTTTAAGAGTCTGTTTAATTTCGTGTAGTTGAATGTAACCGTTAAATTCAATAAATAAATAAAAAATACATTTTATGATTATTAGTTTTATTTACTAAATTATAAAGAATATTTTTCAATTTTATCATTTGTTTAAAAAATATTTATATACTATTTAAATACTATAATATTATTTTTGATATTTAATAAATATTTAAATATTAGGAGTAGAAATCCTTCCTAAAATGTTGTGTTTGATATTCTAGAAGAATTTCCTTTTAAAATGTTTAAGAAAACTAAAAAATAATATTGTAATTTTTAAAAAATCAACCATTTAGAATTTAATTACAAAGAGTGTTTTAGAAGATATTAGTGTTATAAAATTTATATTATAATATGATTGGGAGGGACCCAGCCACCACGTTCATTGTCACTGCGATTTCAATCTCTTTCACACATGCCCATGTGGCGAGATCCACCTGTCACGCTCATAATTTAATTCTTGTCTCTTCGCTTATCCAAAAATATGGAAAATAGATATATAAATCTTCATGAATTTATGTTGAAGTGAATAATATTAAGTCAATTTCTTTCCCTTTTAAAGGATTAATAAACTTATATTATGAATCTTTGCTTTATGCATTATGAGTTCAATATGATAAATAAATGTCTGTATTTTATCTTTCTAAATCACTTACTGCTATCTATGTTCTTGAATCTGGTTTCTCATCCATTAGCTCGTTTATTTATGTTAATTTTTTTTAAAAGTTTCTAATAATTTCTTGAATTCTTGATTTTGTATTTTATAGGTAAAGTTGAATAACTTTTGTAGATGTGTTAGATACTTTTTTTTTATAAAAAATTTGTAATTTATTATTTTCTTTTTTCTGCTGGATTTATTGCGCAAATCATGCTGGCGGCAGCTGCATCGCATGCCGAAACTATAGTAATCAATAAATGAGACGACCTTGGCATTTAAAGATACCTTCACCGACACATCAAATTTTTGGTCAAATAAAGGAAACAAAAAATGGATTGCTTTCTGTTTCATCTGTAGCATTAAACTTTTACAGCCAACTTTACAACTTTTTAAGTAACGCTAGCTTTCCGTATGATCCGTATGCACCCAATTCATTGAATGTGGGACTCCACATTTAATGCCTATGAAATTCATTCTGGGTTTCACAAACAAAGCCTTAAATTTTCTTTCTTCTTGTGTTTGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNGGTGTCCATTTTTTTGTTGAGGATTATTGGGAGGGAGTTACACGTGGGCTAATTTAAGAAACGATCATGAATTTATGAATTTATAAGTAACTAATACATCTGTACGAGTCTTTTTGGGTAAGCCCAAAATAAAGACATGAGAGCTTATTCTCACCATATCATACCATTGTGGAGAGTCGTGATGCTCTTAACTTAGTCAAGTCAATAGAATCCTCAAATGTCGAACAAATGGCGTACTTTGTTCGAGGACTCCAGAGAAGGAGTCGAGCCTTGATTAATGGAAGAGAGGTTGTTCGAAGGCTCCATAGACCTCAGGAGAGGTTCTATAGTGTACTTTGTTCGAGGGGAGGGAGGTTGTTCGAGGGCTCCATAGGCATTAGGGGAGGTTCTATAGTGTACTTTGTTTGAGGGGAGGGAGTCTCAGATTGGCTAATTTAAGGAATGACTGAGCAATTCGCAGTTTGTTTCACGGTCTAAATTGGTTCATACTTACACATTCTTGTTTCATTCGATCTCACTTGTGTTTCTCATTCTTTACGGTAGTGCTCATGTGTAGTTATAATGTGGATGTGTAGTGATTGGGTGGTTATGTTTGGAAATTTCCCACAGGAGCATACGCAACAGCACAGAGAGGAGGAATTTGGGGTTCTTCTCTTGTGGAACAGGAAACCCAATTGATGATTGTTGGCGTTGTGACCCACATTGGCAACTGCGGCGAAAGCGCCTCGCCAATTGCGGCATTGGGTTTGGTCGTAATGCAGTTGGTGGCCGTGATGGGCGTTACTACGTCGTCTCTGATCCACGTGACGACGATCCTGTCAATCCCAGACCAGGCACCCTTCGCCATGCTGTGATTCAAGACAGACCATTATGGATTGTGTTCAAACGAGACATGGTGATCACTTTAAAGCAAGAACTCATCATGAACAGCTTCAAGACAATTGATGGGCGTGGCGTCAATGTGCACATCGCTTATGGTGCTTGTATTACTATCCAATTCATAACCAATGTTATTATTCATGGTTTGCATATTCATGACTGCAAGCCAACGGGGAACGCCATGGTTCGAAGCTCGCCTAGTCATTATGGATGGAGGACAATGGCTGATGGTGATGGGATTTCCATTTTTGGGTCGAGTCATATTTGGATTGACCATAATTCTCTTTCTTCTTGTTCTGATGGGCTCATTGATGCTATCATGGGATCAACTGCTATCACAATTTCTAACAATTACTTCACCCACCACAATGAGGTAAAAAGTTGCACTTTTGTCAAATGATCGCAAATGTTGGAATTTGTTCTGAAATTGGCTGAGATTGTTGCAAAACAGGTGATGCTCTTGGGACATAGTGACTCTTATGTAAGGGACAAGCAAATGCAAGTCACCATTGCTTATAACCATTTTGGTGAAGGTCTCATCCAAAGAATGCCAAGGTACTTTTCTCCTCTCTCTCTCTCTCATAATTGATTTTAATTATGTTATGAATCACGAACTCCACCGTGATATGATATTGTCTATTTTAAGCATAAATTCTCATGGCTGAATTGATTTTAGTTTCCGAAAAGGTCTCGTACCAATATATATAGTGTTCCTTACTTATAAAGTCATGATGTTCCTCTTGATTAGCTAACGTGAGACTACTATTTTCAATAATCCTTAATAAATAGTGTCCCTAGAGGCCTCCTTCTTTGGAGCTCTTGAACTTTGGAGTACACCCTTTGTTCAACACCTGAGTCACCTTTGACTACACTTTCGAGCCTCACCTCCGCTTCGAACAAAGTACACCACAAAGCCTCTCTTGAAGTCTCCTTCCCTGGAGCTCTCGAACAACCTCCCCTTATTTGAGGCTCGACTTCTTTTTTGGAGTCCTCGAACTAAGGGTGAACAAAGTACACCCTTTGTTCGACACCTGAGTCACCTTTGACTACACTTTCGAGCCTCACCTCCCATTCGAACAAAGTACACCACAAAACCTCTCTTGAGGTCTCCTTCCCTGGAGCTCTCGAACAACCTCCCCTTATTTGAGGCTCGACTCCTTTGGAGTTCTTGAACAAAGTACACCCTTTGTTCGACACCCGAGTCACCTTTGACTACACTTTCGAGCCTTACAACTTCTTTGTTCGGCACTTGAGGATTTTATTGGCAGTGTATGCCTCTAATACCATGTTAGAAATCACGACCTTCACAATTGTATGATATTGTCCACCTTAAGCATAAATTCTCGTGACTTTGCTTTTGATTTTCCTAAAGGTCTTATAACAATACAGATAGAATTTCTTAGTTATAATAAATCCATGACGGACTACTACTCTCAATAATCTTCAACAGATTCTGTGTACTCATACCTGAGAACCTTTATTTATGTCTAAATGCTATCTAAATTTTTAACGAACCTATTAGATGATTTTGTAAGTTACGTAACTAAAATAAACCCAAAAATGTTTACTCATGTGACCCAATAATTTAATATTTCAGGTGTAGACATGGGTATTTCCATGTAGTAAACAATGACTACACTCACTGGGTAATGTATGCCATTGGTGGAAGTGCTAATCCCACCATTAATAGCCAGGGCAACCGATATCTCGCCCCCGTCAACCCTTTTGCCAAAGAGGTATCTTCGTAGAACGCTTCAAATATAACTCAATAGATAAGATATCAATTAACATTCTAACGATCCATGGTTCAATTTTCTATCTCGCAATTGTTGACCCGTAGGTCACAAAGAGAGTTGTCACATCTAACGGTGTATGGAGGCATTGGAATTGGAGATCGGAGGGAGATCTCATGCTAAATGGAGCCTATTTCACTCCATCAGGGGCTGGTGCAGGAGCCAGTTATGCAAGAGCCTCAAGCTTAGGAGCCAAATCCTCTTCCTTGGTGGGCTCGCTTACTTCAAATGCAGGTGCCCTTTCTTGTCGTAGGGGATTCCGTTGTTAA

mRNA sequence

CGTCCCGGTTTTGCTTCCCATTCAATTCCCTCTCTTTCGTTTCACAACTACTCGCATTTAACGCTCTCATACAAATCCCACAGATCGAGCGATCGAGAGATACAATACACAGTCGCTTAAAATTTTTTCGGAGAAGCAGAGAAAGCTTCAGAATCATCAATAATGGCGGTCACTCTTAGACTACAGTTTTCAACCGCTTCATTAATGTTCTTCCTTCTTCTCAACATCCTCTTCGTTCAATCCAGTTTTGCTGGAGATCAGCGATTACAGAGCTTTAATTCTTCATCCATGGCGGACAGTTTTGCTGGAGATCAGCGATTGCAGAGCTTTAATTCTTCATCCATGGCGGACAGTTTTTCTGGAGATCAGAGACTGCAGAGCTTCAATTCTTCATCCATGGCGGACCGGTATGTTAAGAATGAGCATGCCGTTGATAATCCAGAGGAAATTGCATCAATGGTGGATTTGAGCATACGCAACAGCACAGAGAGGAGGAATTTGGGGTTCTTCTCTTGTGGAACAGGAAACCCAATTGATGATTGTTGGCGTTGTGACCCACATTGGCAACTGCGGCGAAAGCGCCTCGCCAATTGCGGCATTGGGTTTGGTCGTAATGCAGTTGGTGGCCGTGATGGGCGTTACTACGTCGTCTCTGATCCACGTGACGACGATCCTGTCAATCCCAGACCAGGCACCCTTCGCCATGCTGTGATTCAAGACAGACCATTATGGATTGTGTTCAAACGAGACATGGTGATCACTTTAAAGCAAGAACTCATCATGAACAGCTTCAAGACAATTGATGGGCGTGGCGTCAATGTGCACATCGCTTATGGTGCTTGTATTACTATCCAATTCATAACCAATGTTATTATTCATGGTTTGCATATTCATGACTGCAAGCCAACGGGGAACGCCATGGTTCGAAGCTCGCCTAGTCATTATGGATGGAGGACAATGGCTGATGGTGATGGGATTTCCATTTTTGGGTCGAGTCATATTTGGATTGACCATAATTCTCTTTCTTCTTGTTCTGATGGGCTCATTGATGCTATCATGGGATCAACTGCTATCACAATTTCTAACAATTACTTCACCCACCACAATGAGGTGATGCTCTTGGGACATAGTGACTCTTATGTAAGGGACAAGCAAATGCAAGTCACCATTGCTTATAACCATTTTGGGGCTGGTGCAGGAGCCAGTTATGCAAGAGCCTCAAGCTTAGGAGCCAAATCCTCTTCCTTGGTGGGCTCGCTTACTTCAAATGCAGGTGCCCTTTCTTGTCGTAGGGGATTCCGTTGTTAA

Coding sequence (CDS)

ATGGCGGTCACTCTTAGACTACAGTTTTCAACCGCTTCATTAATGTTCTTCCTTCTTCTCAACATCCTCTTCGTTCAATCCAGTTTTGCTGGAGATCAGCGATTACAGAGCTTTAATTCTTCATCCATGGCGGACAGTTTTGCTGGAGATCAGCGATTGCAGAGCTTTAATTCTTCATCCATGGCGGACAGTTTTTCTGGAGATCAGAGACTGCAGAGCTTCAATTCTTCATCCATGGCGGACCGGTATGTTAAGAATGAGCATGCCGTTGATAATCCAGAGGAAATTGCATCAATGGTGGATTTGAGCATACGCAACAGCACAGAGAGGAGGAATTTGGGGTTCTTCTCTTGTGGAACAGGAAACCCAATTGATGATTGTTGGCGTTGTGACCCACATTGGCAACTGCGGCGAAAGCGCCTCGCCAATTGCGGCATTGGGTTTGGTCGTAATGCAGTTGGTGGCCGTGATGGGCGTTACTACGTCGTCTCTGATCCACGTGACGACGATCCTGTCAATCCCAGACCAGGCACCCTTCGCCATGCTGTGATTCAAGACAGACCATTATGGATTGTGTTCAAACGAGACATGGTGATCACTTTAAAGCAAGAACTCATCATGAACAGCTTCAAGACAATTGATGGGCGTGGCGTCAATGTGCACATCGCTTATGGTGCTTGTATTACTATCCAATTCATAACCAATGTTATTATTCATGGTTTGCATATTCATGACTGCAAGCCAACGGGGAACGCCATGGTTCGAAGCTCGCCTAGTCATTATGGATGGAGGACAATGGCTGATGGTGATGGGATTTCCATTTTTGGGTCGAGTCATATTTGGATTGACCATAATTCTCTTTCTTCTTGTTCTGATGGGCTCATTGATGCTATCATGGGATCAACTGCTATCACAATTTCTAACAATTACTTCACCCACCACAATGAGGTGATGCTCTTGGGACATAGTGACTCTTATGTAAGGGACAAGCAAATGCAAGTCACCATTGCTTATAACCATTTTGGGGCTGGTGCAGGAGCCAGTTATGCAAGAGCCTCAAGCTTAGGAGCCAAATCCTCTTCCTTGGTGGGCTCGCTTACTTCAAATGCAGGTGCCCTTTCTTGTCGTAGGGGATTCCGTTGTTAA

Protein sequence

MAVTLRLQFSTASLMFFLLLNILFVQSSFAGDQRLQSFNSSSMADSFAGDQRLQSFNSSSMADSFSGDQRLQSFNSSSMADRYVKNEHAVDNPEEIASMVDLSIRNSTERRNLGFFSCGTGNPIDDCWRCDPHWQLRRKRLANCGIGFGRNAVGGRDGRYYVVSDPRDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSCSDGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGAGAGASYARASSLGAKSSSLVGSLTSNAGALSCRRGFRC

Homology

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BLAST of Cp4.1LG15g01230 vs. Swiss-Prot
Match: PLY20_ARATH (Probable pectate lyase 20 OS=Arabidopsis thaliana GN=At5g48900 PE=2 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 9.8e-139
Identity = 225/259 (86.87%), Postives = 244/259 (94.21%), Query Frame = 1


Query: 86  NEHAVDNPEEIASMVDLSIRNSTERRNLGFFSCGTGNPIDDCWRCDPHWQLRRKRLANCG 145
           +EHAV+NPEE+A+MVD+SIRNST RR LG+FSC TGNPIDDCWRCD  WQ RRK LANC 
Sbjct: 33  HEHAVENPEEVAAMVDMSIRNSTARRRLGYFSCSTGNPIDDCWRCDRRWQSRRKHLANCA 92

Query: 146 IGFGRNAVGGRDGRYYVVSDPRDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQEL 205
           IGFGRNA+GGRDGRYYVVSDP DD+PVNP+PGTLRHAVIQ+ PLWIVFKRDMVITLK+EL
Sbjct: 93  IGFGRNAIGGRDGRYYVVSDPNDDNPVNPKPGTLRHAVIQEEPLWIVFKRDMVITLKEEL 152

Query: 206 IMNSFKTIDGRGVNVHIAYGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRT 265
           IMNSFKTIDGRGVNVHIA GACITIQF+TN+IIHG+HIHDC+PTGNAMVRSSPSHYGWRT
Sbjct: 153 IMNSFKTIDGRGVNVHIANGACITIQFVTNIIIHGIHIHDCRPTGNAMVRSSPSHYGWRT 212

Query: 266 MADGDGISIFGSSHIWIDHNSLSSCSDGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDS 325
           MADGDGISIFGSSHIWIDHNSLS+C+DGLIDA+M STAITISNNYFTHHNEVMLLGHSD+
Sbjct: 213 MADGDGISIFGSSHIWIDHNSLSNCADGLIDAVMASTAITISNNYFTHHNEVMLLGHSDT 272

Query: 326 YVRDKQMQVTIAYNHFGAG 345
           Y RDK MQVTIAYNHFG G
Sbjct: 273 YTRDKVMQVTIAYNHFGEG 291

[Close]

BLAST of Cp4.1LG15g01230 vs. Swiss-Prot
Match: PLY8_ARATH (Probable pectate lyase 8 OS=Arabidopsis thaliana GN=At3g07010 PE=2 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 3.5e-136
Identity = 218/259 (84.17%), Postives = 245/259 (94.59%), Query Frame = 1


Query: 86  NEHAVDNPEEIASMVDLSIRNSTERRNLGFFSCGTGNPIDDCWRCDPHWQLRRKRLANCG 145
           +EHAV+NP+E+A+MVD+SIRNSTERR LG+FSC TGNPIDDCWRCD  WQLRRKRLA+C 
Sbjct: 32  HEHAVENPDEVAAMVDMSIRNSTERRRLGYFSCATGNPIDDCWRCDRKWQLRRKRLADCS 91

Query: 146 IGFGRNAVGGRDGRYYVVSDPRDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQEL 205
           IGFGRNA+GGRDGR+YVV+DP DDDPVNP PGTLRHAVIQD PLWI+FKRDMVITLKQEL
Sbjct: 92  IGFGRNAIGGRDGRFYVVTDPGDDDPVNPIPGTLRHAVIQDEPLWIIFKRDMVITLKQEL 151

Query: 206 IMNSFKTIDGRGVNVHIAYGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRT 265
           IMNSFKTIDGRGVNVHIA GAC+TIQ++TN+I+HG+H+HDCKPTGNAMVRSSPSHYG+R+
Sbjct: 152 IMNSFKTIDGRGVNVHIANGACLTIQYVTNIIVHGIHVHDCKPTGNAMVRSSPSHYGFRS 211

Query: 266 MADGDGISIFGSSHIWIDHNSLSSCSDGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDS 325
           MADGD ISIFGSSHIWIDHNSLS+C+DGL+DA+M STAIT+SNN+FTHHNEVMLLGHSDS
Sbjct: 212 MADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMSSTAITVSNNFFTHHNEVMLLGHSDS 271

Query: 326 YVRDKQMQVTIAYNHFGAG 345
           Y RDK MQVTIAYNHFG G
Sbjct: 272 YTRDKVMQVTIAYNHFGEG 290

[Close]

BLAST of Cp4.1LG15g01230 vs. Swiss-Prot
Match: PLY10_ARATH (Probable pectate lyase 10 OS=Arabidopsis thaliana GN=At3g24670 PE=2 SV=2)

HSP 1 Score: 483.4 bits (1243), Expect = 2.3e-135
Identity = 233/293 (79.52%), Postives = 256/293 (87.37%), Query Frame = 1


Query: 57  NSSSMADSFSGDQRLQSFNSSSMADRYVK-----NEHAVDNPEEIASMVDLSIRNSTERR 116
           NSS+MA   + D    S ++SS A++        NEHAV NPEE+A+MVD+ I+NSTERR
Sbjct: 23  NSSTMAQE-TEDLNSHSSSNSSTANKLPNDDGAWNEHAVKNPEEVAAMVDMKIKNSTERR 82

Query: 117 NLGFFSCGTGNPIDDCWRCDPHWQLRRKRLANCGIGFGRNAVGGRDGRYYVVSDPRDDDP 176
            LGFFSC TGNPIDDCWRCD +W LRRKRLANC IGFGRNA+GGRDGRYYVV+DP D D 
Sbjct: 83  RLGFFSCATGNPIDDCWRCDRNWHLRRKRLANCAIGFGRNAIGGRDGRYYVVTDPSDHDA 142

Query: 177 VNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGACITIQ 236
           VNPRPGTLRHAVIQDRPLWIVFKRDMVITL QELIMNSFKTIDGRGVNV IA GACITIQ
Sbjct: 143 VNPRPGTLRHAVIQDRPLWIVFKRDMVITLTQELIMNSFKTIDGRGVNVAIAGGACITIQ 202

Query: 237 FITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSCS 296
           ++TN+IIHG+++HDC+ TGNAMVRSSPSHYGWRTMADGD ISIFGSSHIWIDHNSLS+C+
Sbjct: 203 YVTNIIIHGINVHDCRRTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCA 262

Query: 297 DGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGAG 345
           DGLIDAIMGSTAITISNNY THHNEVML+GHSDSY RDK MQVTIAYNHFG G
Sbjct: 263 DGLIDAIMGSTAITISNNYMTHHNEVMLMGHSDSYTRDKLMQVTIAYNHFGEG 314

[Close]

BLAST of Cp4.1LG15g01230 vs. Swiss-Prot
Match: PLY1_ARATH (Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2)

HSP 1 Score: 476.9 bits (1226), Expect = 2.1e-133
Identity = 217/276 (78.62%), Postives = 247/276 (89.49%), Query Frame = 1


Query: 73  SFNSSSMADRYVKNEHAVDNPEEIA----SMVDLSIRNSTERRNLGFFSCGTGNPIDDCW 132
           + +S   +D    N+HAV NP+E+A    ++ ++S+RN TERR LG+F+CGTGNPIDDCW
Sbjct: 28  NISSLPRSDETEWNQHAVTNPDEVADEVLALTEMSVRNHTERRKLGYFTCGTGNPIDDCW 87

Query: 133 RCDPHWQLRRKRLANCGIGFGRNAVGGRDGRYYVVSDPRDDDPVNPRPGTLRHAVIQDRP 192
           RCDP+W   RKRLA+CGIGFGRNA+GGRDGR+YVV+DPRDD+PVNPRPGTLRHAVIQDRP
Sbjct: 88  RCDPNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDNPVNPRPGTLRHAVIQDRP 147

Query: 193 LWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGACITIQFITNVIIHGLHIHDCKP 252
           LWIVFKRDMVI LKQELI+NSFKTIDGRG NVHIA G CITIQF+TNVI+HGLHIHDCKP
Sbjct: 148 LWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIVHGLHIHDCKP 207

Query: 253 TGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSCSDGLIDAIMGSTAITISN 312
           TGNAMVRSS +H+GWRTMADGD ISIFGSSH+WIDHNSLS C+DGL+DA+MGSTAITISN
Sbjct: 208 TGNAMVRSSETHFGWRTMADGDAISIFGSSHVWIDHNSLSHCADGLVDAVMGSTAITISN 267

Query: 313 NYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGAG 345
           N+ THHNEVMLLGHSDSY+RDK MQVTIAYNHFG G
Sbjct: 268 NHLTHHNEVMLLGHSDSYMRDKAMQVTIAYNHFGVG 303

[Close]

BLAST of Cp4.1LG15g01230 vs. Swiss-Prot
Match: PLY14_ARATH (Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=2)

HSP 1 Score: 468.4 bits (1204), Expect = 7.5e-131
Identity = 218/260 (83.85%), Postives = 237/260 (91.15%), Query Frame = 1


Query: 86  NEHAVDNPEEIASMVDLSIRNSTERRNLGFFS-CGTGNPIDDCWRCDPHWQLRRKRLANC 145
           +EHAV +PEEIA+MVD+SIRNST RR LGFFS C TGNPIDDCWRCD  W  RRKRLA+C
Sbjct: 53  HEHAVKDPEEIAAMVDMSIRNSTYRRKLGFFSSCSTGNPIDDCWRCDKKWHRRRKRLADC 112

Query: 146 GIGFGRNAVGGRDGRYYVVSDPRDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQE 205
            IGFGRNAVGGRDGRYY+V+DP D DPV P+PGTLR+AVIQD PLWIVFKRDMVITL QE
Sbjct: 113 AIGFGRNAVGGRDGRYYIVTDPSDHDPVTPKPGTLRYAVIQDEPLWIVFKRDMVITLSQE 172

Query: 206 LIMNSFKTIDGRGVNVHIAYGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 265
           LIMNSFKTIDGRGVNVHIA GAC+T+Q++TN+IIHG++IHDCK TGNAMVRSS SHYGWR
Sbjct: 173 LIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIIIHGINIHDCKRTGNAMVRSSESHYGWR 232

Query: 266 TMADGDGISIFGSSHIWIDHNSLSSCSDGLIDAIMGSTAITISNNYFTHHNEVMLLGHSD 325
           TMADGDGISIFGSSHIWIDHNSLSSC+DGLIDAIMGSTAITISNNY THHNE +LLGH+D
Sbjct: 233 TMADGDGISIFGSSHIWIDHNSLSSCADGLIDAIMGSTAITISNNYLTHHNEAILLGHTD 292

Query: 326 SYVRDKQMQVTIAYNHFGAG 345
           SY RDK MQVTIAYNHFG G
Sbjct: 293 SYTRDKMMQVTIAYNHFGEG 312

[Close]

BLAST of Cp4.1LG15g01230 vs. TrEMBL
Match: A0A0A0LBK0_CUCSA (Pectate lyase OS=Cucumis sativus GN=Csa_3G624020 PE=3 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 7.3e-157
Identity = 265/281 (94.31%), Postives = 272/281 (96.80%), Query Frame = 1


Query: 64  SFSGDQRLQSFNSSSMADRYVKNEHAVDNPEEIASMVDLSIRNSTERRNLGFFSCGTGNP 123
           SF+ D+RL SFNSSSM  RY++NEHAVDNPEEIASMVDLSIRNSTERRNLGFFSCGTGNP
Sbjct: 27  SFAEDERLHSFNSSSMPYRYIENEHAVDNPEEIASMVDLSIRNSTERRNLGFFSCGTGNP 86

Query: 124 IDDCWRCDPHWQLRRKRLANCGIGFGRNAVGGRDGRYYVVSDPRDDDPVNPRPGTLRHAV 183
           IDDCWRCDP WQLRRK LANCGIGFGRNAVGGRDGRYYVVSDP DDDP+NPRPGTLRHAV
Sbjct: 87  IDDCWRCDPRWQLRRKHLANCGIGFGRNAVGGRDGRYYVVSDPGDDDPINPRPGTLRHAV 146

Query: 184 IQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGACITIQFITNVIIHGLHI 243
           IQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRG NVHIAYGACITIQFITNVIIHGLHI
Sbjct: 147 IQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHIAYGACITIQFITNVIIHGLHI 206

Query: 244 HDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSCSDGLIDAIMGSTA 303
           HDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSC+DGLIDA+MGSTA
Sbjct: 207 HDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAVMGSTA 266

Query: 304 ITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGAG 345
           ITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFG G
Sbjct: 267 ITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGEG 307

[Close]

BLAST of Cp4.1LG15g01230 vs. TrEMBL
Match: V7B4Q0_PHAVU (Pectate lyase OS=Phaseolus vulgaris GN=PHAVU_008G123000g PE=3 SV=1)

HSP 1 Score: 529.3 bits (1362), Expect = 4.0e-147
Identity = 251/277 (90.61%), Postives = 260/277 (93.86%), Query Frame = 1


Query: 70  RLQSFNSSSMADRY--VKNEHAVDNPEEIASMVDLSIRNSTERRNLGFFSCGTGNPIDDC 129
           R+QS  +SSMA+R     NEHAVDNPEEIASMVD SIRNST RRNL FFSCGTGNPIDDC
Sbjct: 49  RVQSLKNSSMAERLEDALNEHAVDNPEEIASMVDESIRNSTARRNLNFFSCGTGNPIDDC 108

Query: 130 WRCDPHWQLRRKRLANCGIGFGRNAVGGRDGRYYVVSDPRDDDPVNPRPGTLRHAVIQDR 189
           WRCD  W LRRKRLANCGIGFGRNA+GGRDGRYYVVSDP DDDPVNP+PGTLRHAVIQDR
Sbjct: 109 WRCDKRWYLRRKRLANCGIGFGRNAIGGRDGRYYVVSDPNDDDPVNPKPGTLRHAVIQDR 168

Query: 190 PLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGACITIQFITNVIIHGLHIHDCK 249
           PLWIVFKRDMVITLKQELIMNSFKTIDGRG NVHIAYGACIT+QFITNVIIHGLHIHDCK
Sbjct: 169 PLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHIAYGACITVQFITNVIIHGLHIHDCK 228

Query: 250 PTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSCSDGLIDAIMGSTAITIS 309
            TGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLS+C+DGLIDA+MGSTAITIS
Sbjct: 229 QTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSTCADGLIDAVMGSTAITIS 288

Query: 310 NNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGAG 345
           NNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFG G
Sbjct: 289 NNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGEG 325

[Close]

BLAST of Cp4.1LG15g01230 vs. TrEMBL
Match: M5VZ19_PRUPE (Pectate lyase OS=Prunus persica GN=PRUPE_ppa006229mg PE=3 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 2.0e-146
Identity = 242/259 (93.44%), Postives = 254/259 (98.07%), Query Frame = 1


Query: 86  NEHAVDNPEEIASMVDLSIRNSTERRNLGFFSCGTGNPIDDCWRCDPHWQLRRKRLANCG 145
           NEHAVDNP+EIASMVD+SIRNSTERRNLGFFSC TGNP+DDCWRCDPHWQL RKRLANCG
Sbjct: 39  NEHAVDNPDEIASMVDMSIRNSTERRNLGFFSCATGNPVDDCWRCDPHWQLHRKRLANCG 98

Query: 146 IGFGRNAVGGRDGRYYVVSDPRDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQEL 205
           IGFGRNAVGGRDG+YYVV++PRDDDP+NPRPGTLRHAVIQD+PLWIVFKRDMVITLKQEL
Sbjct: 99  IGFGRNAVGGRDGKYYVVNNPRDDDPINPRPGTLRHAVIQDQPLWIVFKRDMVITLKQEL 158

Query: 206 IMNSFKTIDGRGVNVHIAYGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRT 265
           IMNSFKTIDGRGVNVHIAYGACIT+QFITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRT
Sbjct: 159 IMNSFKTIDGRGVNVHIAYGACITVQFITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRT 218

Query: 266 MADGDGISIFGSSHIWIDHNSLSSCSDGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDS 325
           +ADGDGISIFGSSHIWIDHNSLS+C+DGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDS
Sbjct: 219 IADGDGISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDS 278

Query: 326 YVRDKQMQVTIAYNHFGAG 345
           Y RDK MQVTIAYNHFG G
Sbjct: 279 YTRDKLMQVTIAYNHFGEG 297

[Close]

BLAST of Cp4.1LG15g01230 vs. TrEMBL
Match: A0A0S3RUV8_PHAAN (Pectate lyase OS=Vigna angularis var. angularis GN=Vigan.04G176300 PE=3 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 4.4e-146
Identity = 249/277 (89.89%), Postives = 260/277 (93.86%), Query Frame = 1


Query: 70  RLQSFNSSSMADRY--VKNEHAVDNPEEIASMVDLSIRNSTERRNLGFFSCGTGNPIDDC 129
           R QS  +SSMA+      NEHA+DNPEEIASMVD SIRNST RRNL FFSCGTGNPIDDC
Sbjct: 105 RSQSLKNSSMAESLEDALNEHAIDNPEEIASMVDESIRNSTARRNLNFFSCGTGNPIDDC 164

Query: 130 WRCDPHWQLRRKRLANCGIGFGRNAVGGRDGRYYVVSDPRDDDPVNPRPGTLRHAVIQDR 189
           WRCD  W LRRK+LANCGIGFGRNA+GGRDGRYYVV++P DDDPVNP+PGTLRHAVIQD+
Sbjct: 165 WRCDKRWYLRRKKLANCGIGFGRNAIGGRDGRYYVVTNPNDDDPVNPKPGTLRHAVIQDQ 224

Query: 190 PLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGACITIQFITNVIIHGLHIHDCK 249
           PLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGACITIQFITNVIIHGLHIHDCK
Sbjct: 225 PLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGACITIQFITNVIIHGLHIHDCK 284

Query: 250 PTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSCSDGLIDAIMGSTAITIS 309
           PTGNAMVRSSPSHYGWRT+ADGDGISIFGSSHIWIDHNSLSSCSDGL+DAIMGSTAITIS
Sbjct: 285 PTGNAMVRSSPSHYGWRTLADGDGISIFGSSHIWIDHNSLSSCSDGLVDAIMGSTAITIS 344

Query: 310 NNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGAG 345
           NNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFG G
Sbjct: 345 NNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGEG 381

[Close]

BLAST of Cp4.1LG15g01230 vs. TrEMBL
Match: K7LAU1_SOYBN (Pectate lyase OS=Glycine max GN=GLYMA_08G356800 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 9.9e-146
Identity = 252/297 (84.85%), Postives = 265/297 (89.23%), Query Frame = 1


Query: 50  DQRLQSFNSSSMADSFSGDQRLQSFNSSSMADRY--VKNEHAVDNPEEIASMVDLSIRNS 109
           D  +Q   ++   D      R+QS  +SSMA+R     NEHAVDNPEEIASMVD SIRN 
Sbjct: 29  DNEMQKHEATESRDVVEEKLRVQSLKNSSMAERSGGALNEHAVDNPEEIASMVDESIRNY 88

Query: 110 TERRNLGFFSCGTGNPIDDCWRCDPHWQLRRKRLANCGIGFGRNAVGGRDGRYYVVSDPR 169
           T RRNL FFSCGTGNPIDDCWRCD  W  RRKRLANCGIGFGRNA+GGRDGRYYVVSDP 
Sbjct: 89  TARRNLNFFSCGTGNPIDDCWRCDKRWYARRKRLANCGIGFGRNAIGGRDGRYYVVSDPN 148

Query: 170 DDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGAC 229
           DDDPVNP+PGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGAC
Sbjct: 149 DDDPVNPKPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGAC 208

Query: 230 ITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSL 289
           ITIQF+TNVIIHGLHIHDCK TGNAMVRSSPSHYGWRT+ADGDGISIFGSSHIWIDHNSL
Sbjct: 209 ITIQFVTNVIIHGLHIHDCKVTGNAMVRSSPSHYGWRTLADGDGISIFGSSHIWIDHNSL 268

Query: 290 SSCSDGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGAG 345
           SSC+DGL+DA+MGSTAITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFG G
Sbjct: 269 SSCADGLVDAVMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGEG 325

[Close]

BLAST of Cp4.1LG15g01230 vs. TAIR10
Match: AT5G48900.1 (AT5G48900.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 494.6 bits (1272), Expect = 5.5e-140
Identity = 225/259 (86.87%), Postives = 244/259 (94.21%), Query Frame = 1


Query: 86  NEHAVDNPEEIASMVDLSIRNSTERRNLGFFSCGTGNPIDDCWRCDPHWQLRRKRLANCG 145
           +EHAV+NPEE+A+MVD+SIRNST RR LG+FSC TGNPIDDCWRCD  WQ RRK LANC 
Sbjct: 33  HEHAVENPEEVAAMVDMSIRNSTARRRLGYFSCSTGNPIDDCWRCDRRWQSRRKHLANCA 92

Query: 146 IGFGRNAVGGRDGRYYVVSDPRDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQEL 205
           IGFGRNA+GGRDGRYYVVSDP DD+PVNP+PGTLRHAVIQ+ PLWIVFKRDMVITLK+EL
Sbjct: 93  IGFGRNAIGGRDGRYYVVSDPNDDNPVNPKPGTLRHAVIQEEPLWIVFKRDMVITLKEEL 152

Query: 206 IMNSFKTIDGRGVNVHIAYGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRT 265
           IMNSFKTIDGRGVNVHIA GACITIQF+TN+IIHG+HIHDC+PTGNAMVRSSPSHYGWRT
Sbjct: 153 IMNSFKTIDGRGVNVHIANGACITIQFVTNIIIHGIHIHDCRPTGNAMVRSSPSHYGWRT 212

Query: 266 MADGDGISIFGSSHIWIDHNSLSSCSDGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDS 325
           MADGDGISIFGSSHIWIDHNSLS+C+DGLIDA+M STAITISNNYFTHHNEVMLLGHSD+
Sbjct: 213 MADGDGISIFGSSHIWIDHNSLSNCADGLIDAVMASTAITISNNYFTHHNEVMLLGHSDT 272

Query: 326 YVRDKQMQVTIAYNHFGAG 345
           Y RDK MQVTIAYNHFG G
Sbjct: 273 YTRDKVMQVTIAYNHFGEG 291

[Close]

BLAST of Cp4.1LG15g01230 vs. TAIR10
Match: AT3G07010.1 (AT3G07010.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 486.1 bits (1250), Expect = 2.0e-137
Identity = 218/259 (84.17%), Postives = 245/259 (94.59%), Query Frame = 1


Query: 86  NEHAVDNPEEIASMVDLSIRNSTERRNLGFFSCGTGNPIDDCWRCDPHWQLRRKRLANCG 145
           +EHAV+NP+E+A+MVD+SIRNSTERR LG+FSC TGNPIDDCWRCD  WQLRRKRLA+C 
Sbjct: 32  HEHAVENPDEVAAMVDMSIRNSTERRRLGYFSCATGNPIDDCWRCDRKWQLRRKRLADCS 91

Query: 146 IGFGRNAVGGRDGRYYVVSDPRDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQEL 205
           IGFGRNA+GGRDGR+YVV+DP DDDPVNP PGTLRHAVIQD PLWI+FKRDMVITLKQEL
Sbjct: 92  IGFGRNAIGGRDGRFYVVTDPGDDDPVNPIPGTLRHAVIQDEPLWIIFKRDMVITLKQEL 151

Query: 206 IMNSFKTIDGRGVNVHIAYGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRT 265
           IMNSFKTIDGRGVNVHIA GAC+TIQ++TN+I+HG+H+HDCKPTGNAMVRSSPSHYG+R+
Sbjct: 152 IMNSFKTIDGRGVNVHIANGACLTIQYVTNIIVHGIHVHDCKPTGNAMVRSSPSHYGFRS 211

Query: 266 MADGDGISIFGSSHIWIDHNSLSSCSDGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDS 325
           MADGD ISIFGSSHIWIDHNSLS+C+DGL+DA+M STAIT+SNN+FTHHNEVMLLGHSDS
Sbjct: 212 MADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMSSTAITVSNNFFTHHNEVMLLGHSDS 271

Query: 326 YVRDKQMQVTIAYNHFGAG 345
           Y RDK MQVTIAYNHFG G
Sbjct: 272 YTRDKVMQVTIAYNHFGEG 290

[Close]

BLAST of Cp4.1LG15g01230 vs. TAIR10
Match: AT3G24670.1 (AT3G24670.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 483.4 bits (1243), Expect = 1.3e-136
Identity = 233/293 (79.52%), Postives = 256/293 (87.37%), Query Frame = 1


Query: 57  NSSSMADSFSGDQRLQSFNSSSMADRYVK-----NEHAVDNPEEIASMVDLSIRNSTERR 116
           NSS+MA   + D    S ++SS A++        NEHAV NPEE+A+MVD+ I+NSTERR
Sbjct: 23  NSSTMAQE-TEDLNSHSSSNSSTANKLPNDDGAWNEHAVKNPEEVAAMVDMKIKNSTERR 82

Query: 117 NLGFFSCGTGNPIDDCWRCDPHWQLRRKRLANCGIGFGRNAVGGRDGRYYVVSDPRDDDP 176
            LGFFSC TGNPIDDCWRCD +W LRRKRLANC IGFGRNA+GGRDGRYYVV+DP D D 
Sbjct: 83  RLGFFSCATGNPIDDCWRCDRNWHLRRKRLANCAIGFGRNAIGGRDGRYYVVTDPSDHDA 142

Query: 177 VNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGACITIQ 236
           VNPRPGTLRHAVIQDRPLWIVFKRDMVITL QELIMNSFKTIDGRGVNV IA GACITIQ
Sbjct: 143 VNPRPGTLRHAVIQDRPLWIVFKRDMVITLTQELIMNSFKTIDGRGVNVAIAGGACITIQ 202

Query: 237 FITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSCS 296
           ++TN+IIHG+++HDC+ TGNAMVRSSPSHYGWRTMADGD ISIFGSSHIWIDHNSLS+C+
Sbjct: 203 YVTNIIIHGINVHDCRRTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCA 262

Query: 297 DGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGAG 345
           DGLIDAIMGSTAITISNNY THHNEVML+GHSDSY RDK MQVTIAYNHFG G
Sbjct: 263 DGLIDAIMGSTAITISNNYMTHHNEVMLMGHSDSYTRDKLMQVTIAYNHFGEG 314

[Close]

BLAST of Cp4.1LG15g01230 vs. TAIR10
Match: AT1G04680.1 (AT1G04680.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 476.9 bits (1226), Expect = 1.2e-134
Identity = 217/276 (78.62%), Postives = 247/276 (89.49%), Query Frame = 1


Query: 73  SFNSSSMADRYVKNEHAVDNPEEIA----SMVDLSIRNSTERRNLGFFSCGTGNPIDDCW 132
           + +S   +D    N+HAV NP+E+A    ++ ++S+RN TERR LG+F+CGTGNPIDDCW
Sbjct: 28  NISSLPRSDETEWNQHAVTNPDEVADEVLALTEMSVRNHTERRKLGYFTCGTGNPIDDCW 87

Query: 133 RCDPHWQLRRKRLANCGIGFGRNAVGGRDGRYYVVSDPRDDDPVNPRPGTLRHAVIQDRP 192
           RCDP+W   RKRLA+CGIGFGRNA+GGRDGR+YVV+DPRDD+PVNPRPGTLRHAVIQDRP
Sbjct: 88  RCDPNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDNPVNPRPGTLRHAVIQDRP 147

Query: 193 LWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGACITIQFITNVIIHGLHIHDCKP 252
           LWIVFKRDMVI LKQELI+NSFKTIDGRG NVHIA G CITIQF+TNVI+HGLHIHDCKP
Sbjct: 148 LWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIVHGLHIHDCKP 207

Query: 253 TGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSCSDGLIDAIMGSTAITISN 312
           TGNAMVRSS +H+GWRTMADGD ISIFGSSH+WIDHNSLS C+DGL+DA+MGSTAITISN
Sbjct: 208 TGNAMVRSSETHFGWRTMADGDAISIFGSSHVWIDHNSLSHCADGLVDAVMGSTAITISN 267

Query: 313 NYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGAG 345
           N+ THHNEVMLLGHSDSY+RDK MQVTIAYNHFG G
Sbjct: 268 NHLTHHNEVMLLGHSDSYMRDKAMQVTIAYNHFGVG 303

[Close]

BLAST of Cp4.1LG15g01230 vs. TAIR10
Match: AT4G13210.2 (AT4G13210.2 Pectin lyase-like superfamily protein)

HSP 1 Score: 468.4 bits (1204), Expect = 4.2e-132
Identity = 218/260 (83.85%), Postives = 237/260 (91.15%), Query Frame = 1


Query: 86  NEHAVDNPEEIASMVDLSIRNSTERRNLGFFS-CGTGNPIDDCWRCDPHWQLRRKRLANC 145
           +EHAV +PEEIA+MVD+SIRNST RR LGFFS C TGNPIDDCWRCD  W  RRKRLA+C
Sbjct: 53  HEHAVKDPEEIAAMVDMSIRNSTYRRKLGFFSSCSTGNPIDDCWRCDKKWHRRRKRLADC 112

Query: 146 GIGFGRNAVGGRDGRYYVVSDPRDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQE 205
            IGFGRNAVGGRDGRYY+V+DP D DPV P+PGTLR+AVIQD PLWIVFKRDMVITL QE
Sbjct: 113 AIGFGRNAVGGRDGRYYIVTDPSDHDPVTPKPGTLRYAVIQDEPLWIVFKRDMVITLSQE 172

Query: 206 LIMNSFKTIDGRGVNVHIAYGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 265
           LIMNSFKTIDGRGVNVHIA GAC+T+Q++TN+IIHG++IHDCK TGNAMVRSS SHYGWR
Sbjct: 173 LIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIIIHGINIHDCKRTGNAMVRSSESHYGWR 232

Query: 266 TMADGDGISIFGSSHIWIDHNSLSSCSDGLIDAIMGSTAITISNNYFTHHNEVMLLGHSD 325
           TMADGDGISIFGSSHIWIDHNSLSSC+DGLIDAIMGSTAITISNNY THHNE +LLGH+D
Sbjct: 233 TMADGDGISIFGSSHIWIDHNSLSSCADGLIDAIMGSTAITISNNYLTHHNEAILLGHTD 292

Query: 326 SYVRDKQMQVTIAYNHFGAG 345
           SY RDK MQVTIAYNHFG G
Sbjct: 293 SYTRDKMMQVTIAYNHFGEG 312

[Close]

BLAST of Cp4.1LG15g01230 vs. NCBI nr
Match: gi|659093009|ref|XP_008447332.1| (PREDICTED: probable pectate lyase 8 [Cucumis melo])

HSP 1 Score: 562.8 bits (1449), Expect = 4.7e-157
Identity = 266/281 (94.66%), Postives = 272/281 (96.80%), Query Frame = 1


Query: 64  SFSGDQRLQSFNSSSMADRYVKNEHAVDNPEEIASMVDLSIRNSTERRNLGFFSCGTGNP 123
           SF+ D+RLQSFNSSSM  RY+KNEHAVDNPEEIASMVD SIRNSTERRNLGFFSCGTGNP
Sbjct: 26  SFAEDERLQSFNSSSMPYRYIKNEHAVDNPEEIASMVDSSIRNSTERRNLGFFSCGTGNP 85

Query: 124 IDDCWRCDPHWQLRRKRLANCGIGFGRNAVGGRDGRYYVVSDPRDDDPVNPRPGTLRHAV 183
           IDDCWRCDP WQLRRK LANCGIGFGRNAVGGRDGRYYVVSDP DDDP+NPRPGTLRHAV
Sbjct: 86  IDDCWRCDPRWQLRRKHLANCGIGFGRNAVGGRDGRYYVVSDPGDDDPINPRPGTLRHAV 145

Query: 184 IQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGACITIQFITNVIIHGLHI 243
           IQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRG NVHIAYGACITIQFITNVIIHGLHI
Sbjct: 146 IQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHIAYGACITIQFITNVIIHGLHI 205

Query: 244 HDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSCSDGLIDAIMGSTA 303
           HDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSC+DGLIDA+MGSTA
Sbjct: 206 HDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAVMGSTA 265

Query: 304 ITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGAG 345
           ITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFG G
Sbjct: 266 ITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGEG 306

[Close]

BLAST of Cp4.1LG15g01230 vs. NCBI nr
Match: gi|449468610|ref|XP_004152014.1| (PREDICTED: probable pectate lyase 8 [Cucumis sativus])

HSP 1 Score: 561.6 bits (1446), Expect = 1.0e-156
Identity = 265/281 (94.31%), Postives = 272/281 (96.80%), Query Frame = 1


Query: 64  SFSGDQRLQSFNSSSMADRYVKNEHAVDNPEEIASMVDLSIRNSTERRNLGFFSCGTGNP 123
           SF+ D+RL SFNSSSM  RY++NEHAVDNPEEIASMVDLSIRNSTERRNLGFFSCGTGNP
Sbjct: 27  SFAEDERLHSFNSSSMPYRYIENEHAVDNPEEIASMVDLSIRNSTERRNLGFFSCGTGNP 86

Query: 124 IDDCWRCDPHWQLRRKRLANCGIGFGRNAVGGRDGRYYVVSDPRDDDPVNPRPGTLRHAV 183
           IDDCWRCDP WQLRRK LANCGIGFGRNAVGGRDGRYYVVSDP DDDP+NPRPGTLRHAV
Sbjct: 87  IDDCWRCDPRWQLRRKHLANCGIGFGRNAVGGRDGRYYVVSDPGDDDPINPRPGTLRHAV 146

Query: 184 IQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGACITIQFITNVIIHGLHI 243
           IQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRG NVHIAYGACITIQFITNVIIHGLHI
Sbjct: 147 IQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHIAYGACITIQFITNVIIHGLHI 206

Query: 244 HDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSCSDGLIDAIMGSTA 303
           HDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSC+DGLIDA+MGSTA
Sbjct: 207 HDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAVMGSTA 266

Query: 304 ITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGAG 345
           ITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFG G
Sbjct: 267 ITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGEG 307

[Close]

BLAST of Cp4.1LG15g01230 vs. NCBI nr
Match: gi|645259770|ref|XP_008235520.1| (PREDICTED: probable pectate lyase 8 [Prunus mume])

HSP 1 Score: 534.6 bits (1376), Expect = 1.4e-148
Identity = 254/290 (87.59%), Postives = 268/290 (92.41%), Query Frame = 1


Query: 57  NSSSMADSFSGDQRLQSFNSSSMAD--RYVKNEHAVDNPEEIASMVDLSIRNSTERRNLG 116
           N   +   F G + LQS  SSSMAD      NEHAVDNP+EIASMVD+SIRNSTERRNLG
Sbjct: 34  NEKLVNSRFVGTEELQSSKSSSMADWSDEALNEHAVDNPDEIASMVDMSIRNSTERRNLG 93

Query: 117 FFSCGTGNPIDDCWRCDPHWQLRRKRLANCGIGFGRNAVGGRDGRYYVVSDPRDDDPVNP 176
           FFSC TGNP+DDCWRCDPHWQL RKRLANCGIGFGRNAVGGRDG+YYVV++PRDDDP+NP
Sbjct: 94  FFSCATGNPVDDCWRCDPHWQLHRKRLANCGIGFGRNAVGGRDGKYYVVNNPRDDDPINP 153

Query: 177 RPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGACITIQFIT 236
           RPGTLRHAVIQD+PLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGACIT+QFIT
Sbjct: 154 RPGTLRHAVIQDQPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGACITVQFIT 213

Query: 237 NVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSCSDGL 296
           NVIIHGLHIHDCKPTGNAMVRSSPSHYGWRT+ADGDGISIFGSSHIWIDHNSLS+C+DGL
Sbjct: 214 NVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTIADGDGISIFGSSHIWIDHNSLSNCADGL 273

Query: 297 IDAIMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGAG 345
           IDAIMGSTAITISNNYFTHHNEVMLLGHSDSY RDK MQVTIAYNHFG G
Sbjct: 274 IDAIMGSTAITISNNYFTHHNEVMLLGHSDSYTRDKLMQVTIAYNHFGEG 323

[Close]

BLAST of Cp4.1LG15g01230 vs. NCBI nr
Match: gi|593434322|ref|XP_007140561.1| (hypothetical protein PHAVU_008G123000g [Phaseolus vulgaris])

HSP 1 Score: 529.3 bits (1362), Expect = 5.7e-147
Identity = 251/277 (90.61%), Postives = 260/277 (93.86%), Query Frame = 1


Query: 70  RLQSFNSSSMADRY--VKNEHAVDNPEEIASMVDLSIRNSTERRNLGFFSCGTGNPIDDC 129
           R+QS  +SSMA+R     NEHAVDNPEEIASMVD SIRNST RRNL FFSCGTGNPIDDC
Sbjct: 49  RVQSLKNSSMAERLEDALNEHAVDNPEEIASMVDESIRNSTARRNLNFFSCGTGNPIDDC 108

Query: 130 WRCDPHWQLRRKRLANCGIGFGRNAVGGRDGRYYVVSDPRDDDPVNPRPGTLRHAVIQDR 189
           WRCD  W LRRKRLANCGIGFGRNA+GGRDGRYYVVSDP DDDPVNP+PGTLRHAVIQDR
Sbjct: 109 WRCDKRWYLRRKRLANCGIGFGRNAIGGRDGRYYVVSDPNDDDPVNPKPGTLRHAVIQDR 168

Query: 190 PLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGACITIQFITNVIIHGLHIHDCK 249
           PLWIVFKRDMVITLKQELIMNSFKTIDGRG NVHIAYGACIT+QFITNVIIHGLHIHDCK
Sbjct: 169 PLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHIAYGACITVQFITNVIIHGLHIHDCK 228

Query: 250 PTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSCSDGLIDAIMGSTAITIS 309
            TGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLS+C+DGLIDA+MGSTAITIS
Sbjct: 229 QTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSTCADGLIDAVMGSTAITIS 288

Query: 310 NNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGAG 345
           NNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFG G
Sbjct: 289 NNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGEG 325

[Close]

BLAST of Cp4.1LG15g01230 vs. NCBI nr
Match: gi|595795535|ref|XP_007201029.1| (hypothetical protein PRUPE_ppa006229mg [Prunus persica])

HSP 1 Score: 526.9 bits (1356), Expect = 2.8e-146
Identity = 242/259 (93.44%), Postives = 254/259 (98.07%), Query Frame = 1


Query: 86  NEHAVDNPEEIASMVDLSIRNSTERRNLGFFSCGTGNPIDDCWRCDPHWQLRRKRLANCG 145
           NEHAVDNP+EIASMVD+SIRNSTERRNLGFFSC TGNP+DDCWRCDPHWQL RKRLANCG
Sbjct: 39  NEHAVDNPDEIASMVDMSIRNSTERRNLGFFSCATGNPVDDCWRCDPHWQLHRKRLANCG 98

Query: 146 IGFGRNAVGGRDGRYYVVSDPRDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQEL 205
           IGFGRNAVGGRDG+YYVV++PRDDDP+NPRPGTLRHAVIQD+PLWIVFKRDMVITLKQEL
Sbjct: 99  IGFGRNAVGGRDGKYYVVNNPRDDDPINPRPGTLRHAVIQDQPLWIVFKRDMVITLKQEL 158

Query: 206 IMNSFKTIDGRGVNVHIAYGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRT 265
           IMNSFKTIDGRGVNVHIAYGACIT+QFITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRT
Sbjct: 159 IMNSFKTIDGRGVNVHIAYGACITVQFITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRT 218

Query: 266 MADGDGISIFGSSHIWIDHNSLSSCSDGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDS 325
           +ADGDGISIFGSSHIWIDHNSLS+C+DGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDS
Sbjct: 219 IADGDGISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDS 278

Query: 326 YVRDKQMQVTIAYNHFGAG 345
           Y RDK MQVTIAYNHFG G
Sbjct: 279 YTRDKLMQVTIAYNHFGEG 297

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g01230 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PLY20_ARATH	9.8e-139	86.87	Probable pectate lyase 20 OS=Arabidopsis thaliana GN=At5g48900 PE=2 SV=1	[more]
PLY8_ARATH	3.5e-136	84.17	Probable pectate lyase 8 OS=Arabidopsis thaliana GN=At3g07010 PE=2 SV=1	[more]
PLY10_ARATH	2.3e-135	79.52	Probable pectate lyase 10 OS=Arabidopsis thaliana GN=At3g24670 PE=2 SV=2	[more]
PLY1_ARATH	2.1e-133	78.62	Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2	[more]
PLY14_ARATH	7.5e-131	83.85	Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=2	[more]

BLAST of Cp4.1LG15g01230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBK0_CUCSA	7.3e-157	94.31	Pectate lyase OS=Cucumis sativus GN=Csa_3G624020 PE=3 SV=1	[more]
V7B4Q0_PHAVU	4.0e-147	90.61	Pectate lyase OS=Phaseolus vulgaris GN=PHAVU_008G123000g PE=3 SV=1	[more]
M5VZ19_PRUPE	2.0e-146	93.44	Pectate lyase OS=Prunus persica GN=PRUPE_ppa006229mg PE=3 SV=1	[more]
A0A0S3RUV8_PHAAN	4.4e-146	89.89	Pectate lyase OS=Vigna angularis var. angularis GN=Vigan.04G176300 PE=3 SV=1	[more]
K7LAU1_SOYBN	9.9e-146	84.85	Pectate lyase OS=Glycine max GN=GLYMA_08G356800 PE=3 SV=1	[more]

BLAST of Cp4.1LG15g01230 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G48900.1	5.5e-140	86.87	Pectin lyase-like superfamily protein	[more]
AT3G07010.1	2.0e-137	84.17	Pectin lyase-like superfamily protein	[more]
AT3G24670.1	1.3e-136	79.52	Pectin lyase-like superfamily protein	[more]
AT1G04680.1	1.2e-134	78.62	Pectin lyase-like superfamily protein	[more]
AT4G13210.2	4.2e-132	83.85	Pectin lyase-like superfamily protein	[more]

BLAST of Cp4.1LG15g01230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659093009\|ref\|XP_008447332.1\|	4.7e-157	94.66	PREDICTED: probable pectate lyase 8 [Cucumis melo]	[more]
gi\|449468610\|ref\|XP_004152014.1\|	1.0e-156	94.31	PREDICTED: probable pectate lyase 8 [Cucumis sativus]	[more]
gi\|645259770\|ref\|XP_008235520.1\|	1.4e-148	87.59	PREDICTED: probable pectate lyase 8 [Prunus mume]	[more]
gi\|593434322\|ref\|XP_007140561.1\|	5.7e-147	90.61	hypothetical protein PHAVU_008G123000g [Phaseolus vulgaris]	[more]
gi\|595795535\|ref\|XP_007201029.1\|	2.8e-146	93.44	hypothetical protein PRUPE_ppa006229mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018082	AmbAllergen
IPR012334	Pectin_lyas_fold
IPR011050	Pectin_lyase_fold/virulence
IPR002022	Pec_lyase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045490	pectin catabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030570	pectate lyase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g01230.1	Cp4.1LG15g01230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002022	Pectate lyase/Amb allergen	PFAM	PF00544	Pec_lyase_C	coord: 205..341 score: 7.0
IPR002022	Pectate lyase/Amb allergen	SMART	SM00656	amb_all	coord: 196..374 score: 1.8
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 99..343 score: 1.73
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 122..344 score: 5.6
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 204..220 score: 2.9E-40coord: 268..289 score: 2.9E-40coord: 168..193 score: 2.9E-40coord: 144..161 score: 2.9
None	No IPR available	PANTHER	PTHR31683	FAMILY NOT NAMED	coord: 53..344 score: 4.6E
None	No IPR available	PANTHER	PTHR31683:SF19	PECTATE LYASE 10-RELATED	coord: 53..344 score: 4.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG15g01230	CmaCh19G001360	Cucurbita maxima (Rimu)	cmacpeB522
Cp4.1LG15g01230	CmoCh19G001550	Cucurbita moschata (Rifu)	cmocpeB481
Cp4.1LG15g01230	ClCG07G001720	Watermelon (Charleston Gray)	cpewcgB240
Cp4.1LG15g01230	Lsi05G010930	Bottle gourd (USVL1VR-Ls)	cpelsiB209
Cp4.1LG15g01230	MELO3C006338.2	Melon (DHL92) v3.6.1	cpemedB283
Cp4.1LG15g01230	MELO3C012791.2	Melon (DHL92) v3.6.1	cpemedB273
Cp4.1LG15g01230	CsaV3_3G028700	Cucumber (Chinese Long) v3	cpecucB0297
Cp4.1LG15g01230	CsaV3_3G011280	Cucumber (Chinese Long) v3	cpecucB0308
Cp4.1LG15g01230	Bhi05G000080	Wax gourd	cpewgoB0327
Cp4.1LG15g01230	CsGy3G011230	Cucumber (Gy14) v2	cgybcpeB341
Cp4.1LG15g01230	CsGy3G025360	Cucumber (Gy14) v2	cgybcpeB331
Cp4.1LG15g01230	Carg16513	Silver-seed gourd	carcpeB0332
Cp4.1LG15g01230	Carg08918	Silver-seed gourd	carcpeB1094
Cp4.1LG15g01230	Carg06272	Silver-seed gourd	carcpeB1329
Cp4.1LG15g01230	Carg05405	Silver-seed gourd	carcpeB0101

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG15g01230	Cp4.1LG12g00970	Cucurbita pepo (Zucchini)	cpecpeB155
Cp4.1LG15g01230	Cp4.1LG05g00730	Cucurbita pepo (Zucchini)	cpecpeB273
Cp4.1LG15g01230	Cp4.1LG08g02980	Cucurbita pepo (Zucchini)	cpecpeB284

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG15g01230	Silver-seed gourd	carcpeB0124
Cp4.1LG15g01230	Cucurbita pepo (Zucchini)	cpecpeB258
Cp4.1LG15g01230	Cucurbita pepo (Zucchini)	cpecpeB265
Cp4.1LG15g01230	Cucumber (Gy14) v1	cgycpeB0379
Cp4.1LG15g01230	Cucurbita maxima (Rimu)	cmacpeB615
Cp4.1LG15g01230	Cucurbita moschata (Rifu)	cmocpeB564
Cp4.1LG15g01230	Cucurbita moschata (Rifu)	cmocpeB848
Cp4.1LG15g01230	Wild cucumber (PI 183967)	cpecpiB242
Cp4.1LG15g01230	Cucumber (Chinese Long) v2	cpecuB238
Cp4.1LG15g01230	Watermelon (97103) v1	cpewmB258
Cp4.1LG15g01230	Melon (DHL92) v3.5.1	cpemeB231