Cp4.1LG15g01090 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACCCGCCGTTATTTCTCAACACAGTGCCTCCCATATTTCCCTCCTCGCTCACTTCCATTTTTCGCTAGGTTGAAGCCGAGTTGAGCTGAGCTTCCTCTCCGCTCCTTTTGTCTGATAAAAGTTGAACGAAACATGGCGCTATGGATGGAGGATGGTTCGGATCCCTTAACAGAGAACGAGAAAGCTGATCTTGAGGCCATAGCTGCCCTTAAAGAGAGTTCTGCTCTCGAGTTCAAGGTCTCTCTCTATATCATATTTACGTTTTGGCGTGTTCTAAATGAAATTTTGACTTCAAATGATTGGAAATCGGTATTTTGGCTGTTGCGGAGGACTTCATTGTTCTGTTGCTTGATTTGTTAACCGCGGACTGTTAAATTCGTGTGGTTTGCTTAATTGCTCTTAATTGTTACAAGAAGTTGGATGCGAGTAAAAGTGATTGAATTGAGCTCGTAGTTATTGGCAAGGATATTTGTTTTCTCTATTGAATGTTCGTCTCCTTTTCGTTCTATTTTGTTTTAAAGATGGGTATGCCAATGTTCAAGAGACTTTAGAAGGTGATCACTTGAAAATCTTGATGTGATTATTTATTTTAATCTTTAGTATGAATATTGGGAGTGTTGAATCTGGTTGTGATGGCTTTACATATGCATGTTGTTGAAAAATTGGTAAAAACTGCTCTCTATGATGGGAAGATTAAGTTTCTGAATCCCGTAATCTATTTCAGATCATTATTTGGACTTGAAATTGGTGTGCAATTGAAACCGTAGTCCTTAGAATCAAGAAATTATGACTAGTGTGAGATTCCACATTGGTTGAAGAGGGGAATGAAGCATTACTTATAAGGCTGTGGAAGCTTCTCCCTAATAAACGTGTTTTGAAACTATGAGGCTGATAGCGATACGTAACGAGCCAAAGTGGACAATAACTACTAGCAGTGAGCTTGGATTGTTACAACTAGTGTGTCCATCTTGGACACCCCAACACTTATTGAACACGTATTGATGTTAGATACTAGTTGTACAAAGTCAATGTAGGTCCAACATTTGTTAGACATGTATCAAACACTCAACTTTGAATAAAATTTGAGAGTGAAATATATCAAACTCATTTTGTGAGCATGTAAATGCATAAACTTATTAACTTTGAATTTGCTTCATGTATAAATGTGAGACCCCACATCGGTTGGGAGGAGAACGAAGCATTCTTTATAAGGGTATGGAAACATCTCCTTAGCATACGCGTAGCTCGAAAGAGAAAACCCAAAAAAGACAATATCTGGTAGCAGTGGGCTTGAGCCGTTACAATAAAAGTGATATATTTTTACAAATGTATTCTTGTTATGTTGCATCCATATCTCGAGTTTGTATCCGTGCTTCTTAACCATAGCCTTTAGGCATGTTTCAGAGTGTTTTTTAAATGAGTAAAATCACTTTTTTCATGTTTAAAACCACTATGAAACATGTCTTTAATTGTTTGGTTTTATACTTTTAAATGTTAAAATTGATTTTCAGAAGCACTTTTAACGATTTCAAAATCACTCTCAAACACGCCCGTTAATTGCTCGTGTCTTTGTTTCATTTGATAAACAAGTTGCGAGTTTCAAGTTTAAATGAATTCATCTATCTGGTTTTATCTTGTAAGTTTCCTATTCTTTTCTCTTTGCAGGAAAAGGGAAATCAATTTGTCAGGTTGGGAAGAAAGCACTATGCTGATGCTATTGATTGCTACACCAGAGCAATAAATCAGAAATCCCTAAGCAACTCTGAGAACTCTATTATTTTTTCAAATCGAGCTCACGTGAATTTACTACTCGGAAACTATAGACGAGCTCTTAACGATGCTGAGGAAGCAATCAATTTGTGTCCCACAAACATCAAGGTAATTATTTTCTTCTTCCAAATACATGTGTTTCCTTAATGTTCCAAATACTCTATTTAGGACAAAAAGATCCCATCAATGTTGTAATCTTTTAACTTTCCCTCTAGCTCGACCTATGTTTTAGATTAAAATTATATAGTTTAATGAAATGACGTGATCGTTATGTAGGCAATTTATCGAGCTGCTAAAGCATCTCTTTCCCTGAATTTATTAGATGAAGCAAAGTCCTATTGTGTAAGTGGGATAAAGTGCGACCCAAATAATGTAGAAATCAAAAATCTCGAGAGACAGATTGATTCGCTGAGATTCGAGCAGGAACAACGCGAGGCTTTAGTCACAAAAGCGATTGCAGATGCAAAGGTTTCGTAATGTACAATCTATGATCATACTTTTGCTTTATCATTTAGCTGCTCAATTCATGTTTTATTATATAAACGACGCAGAAGCTTGTTTCTGCAATCGTGCAACGAGGTTTGAAGATTGGGAGCGCTTCGTATCAAGAACTAACTGGATTAAGAAAGCCTGTATTAGATAAAAATAACATTCTCCATTGGCCAGTTCTTCTACTGTATGCAGAGGTTATGTCCAGTGACTTCATTGAGGATTTCTGTGAGACTGATATGTTTGCAGCTCATCTGGATATGATATCCTTCAGATTTTTAATTGAGAATTTGTGTGATGATTTTCATTTGAATTGACAAATTTGGGAATCCTTAGCTTTCAAACATGTTTTCAGAAGATTGTCCACCTTTGCCTTGGGATGCAGAGAACAAATATACCCGTGAAGCAGTTGAACTATACTATGAGGTAGCAAGTTTCTGTATATACATAAGTTATGTGAGCTTAGCTAGTTTATATTAATCTTTATGTGCTGGTTGTATCAGGCTGGTTCAGGAATTTGTTTATCGAACGAGAAAATTTTACGGAATCTTCTAGAGGGAACCGCTGCGTCTAATGTTGAAAGCATTGCGCTCGATGAGAAAGATGAAGTTGAAGATTCAAATCATGTCACTTCTGCAAGTAAGCCTTTTTATTTCCGTGTTTGCTGAAAATTTTATCCGTTATTTTATTTTTAAGAAATAGAGGAATACGACATAGAAAAAAAAAACTCGCCCCCAATAAAATAAGAGTTCGACACTAACTATGTCATACGGTCTAATGACCGACGTCCACGTCATTTTATCTGTTCTATCAATGGTTCCCTTATTGGTCATTTGGACGTATATTAAGTAGGGTGCCAGATTGTGTTTTCTTCCACAATGTTGTAAGGAACCTTTTGTAATTGGTATCCCATGGCCTATCATTCTTTGCAATAAACCACCACCTAGAAAGTAAAAAACTCAGTCAAATGATGTGGGTGTTAATACGACTACCTTCAGATAATGAAATGGTTTTATAATTGAATTTGTTTGGAGGAAAGTAGGAGATACTTCTTGTGAGATCCCATGTCGATTGGAGAGAGGAACGTGTGCCAGTGAGGACATTGTGCCCCGAAGGAGGTGGATTATGAGATCCTACATCGATTGGAGAGGGAAACGAGTGCCAGCGAGGACGTTGGGGCCCGAAGGGGGTGGATTGTGAAATCCCACATCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACTTCTTTCTTGAAAGCGTATTTTAAAAATCTTGAGGGGAAGCTCAAAAGAGAAAGCTCAAAGAGAACAATATTTGCTGGCGGTGAACTTGGACGTCAACTGGCTGAGTCAACTGGCTGAGTAGTAGGGAGGGGAGGGTAGTTAGGCCAATTTTTCAGGATCGATCTTTAGAAACAGAAGGCATTCATGAGCTATCCATCATCCTTGAATTGGAAGTTCACTGTTTTCCTCTCAATGTCCCATTATTTCCCTTGGTTATGTCTGAAAATTCTTCTCAAATCTTCTTCATTATTAATCCTGGACACTTGAATCCATGCAACTGTCTTTTAAATATAAGTACAATTGCAAGGAAAGAAAAATGACTCGAGAGGTGAAATATGCGTGTATTCACAAAGGAAGAGATTGTCGGGATCGATATTTATGTCTCAGCAATCTTTCTGTTTACTTAAACATTATAGTTCACACCCCAACAAGGTCAATATTCGAGCAAAAGTGGACAAAACTCAACGGTAATTGACATGTAATCCTTCCCTTAAGGTTCGAGGTTCAAATCCTGATCCCCATTTGTTGCACTAAAGAAAACAAGGTCAATATTCGAGTGTGCTGATCATACTCTTAAAAACTGTCATCTGATTTCTATGTGCACTATTTTTTCATATAAAGGCTCTTCTAAATGGATCAAAGTCGATGAAAAGACGATGCTTCACGACGTTCTAAAGAAGCCTAACCATATTATACCAGGAATACCAGGTGCACTGTTACCTTAATCATTTTCTAACATCATAACTACTTTGCATCAAAACTACTGAAAATGACTATATGTTCTTTGTATTTGATTCTTTTGGATGCAGTCTTTTATGTTGTTTCAAGGAACTCAAAATTTTACAAAGAGTTCAAAGCTGGGAGATGGGTTCCTCCTTCATGAGGTTATTTGATGCAACTTTTTGCTTAGGTCAATGCTGGTTCTGTGATTTTGCAAATTTTGTTTTCATGATTGACTTAGGATATGTTAATAATACTTGTTCCAGTGTGCAACTTAAAATATCTTACCATTATTATTATTATTTATTTATTTTACCAAAGTTTTCTTGTTCTTAAGTTGATGTTAATAGTCAATTGAATTCGGTATATGTTTTACTAATGGTTCAAATATGAGTTACCTTCATTTTTATTGAATAAAATTATTAGTAGGAATTATTTATTTAATGTAGAATATATATCAATATAAAATAACTACCGAAGAGGTAAAATAGTTTCTCAAACATAGCATAGCTCAATTGGTTTGAACGTTATAATATTTTTTAGACGAAAAGTTTGC TACCCGCCGTTATTTCTCAACACAGTGCCTCCCATATTTCCCTCCTCGCTCACTTCCATTTTTCGCTAGGTTGAAGCCGAGTTGAGCTGAGCTTCCTCTCCGCTCCTTTTGTCTGATAAAAGTTGAACGAAACATGGCGCTATGGATGGAGGATGGTTCGGATCCCTTAACAGAGAACGAGAAAGCTGATCTTGAGGCCATAGCTGCCCTTAAAGAGAGTTCTGCTCTCGAGTTCAAGGAAAAGGGAAATCAATTTGTCAGGTTGGGAAGAAAGCACTATGCTGATGCTATTGATTGCTACACCAGAGCAATAAATCAGAAATCCCTAAGCAACTCTGAGAACTCTATTATTTTTTCAAATCGAGCTCACGTGAATTTACTACTCGGAAACTATAGACGAGCTCTTAACGATGCTGAGGAAGCAATCAATTTGTGTCCCACAAACATCAAGGCAATTTATCGAGCTGCTAAAGCATCTCTTTCCCTGAATTTATTAGATGAAGCAAAGTCCTATTGTGTAAGTGGGATAAAGTGCGACCCAAATAATGTAGAAATCAAAAATCTCGAGAGACAGATTGATTCGCTGAGATTCGAGCAGGAACAACGCGAGGCTTTAGTCACAAAAGCGATTGCAGATGCAAAGAAGCTTGTTTCTGCAATCGTGCAACGAGGTTTGAAGATTGGGAGCGCTTCGTATCAAGAACTAACTGGATTAAGAAAGCCTGTATTAGATAAAAATAACATTCTCCATTGGCCAGTTCTTCTACTGTATGCAGAGGTTATGTCCAGTGACTTCATTGAGGATTTCTATTGTCCACCTTTGCCTTGGGATGCAGAGAACAAATATACCCGTGAAGCAGTTGAACTATACTATGAGGCTGGTTCAGGAATTTGTTTATCGAACGAGAAAATTTTACGGAATCTTCTAGAGGGAACCGCTGCGTCTAATGTTGAAAGCATTGCGCTCGATGAGAAAGATGAAGTTGAAGATTCAAATCATGTCACTTCTGCAAGCTCTTCTAAATGGATCAAAGTCGATGAAAAGACGATGCTTCACGACGTTCTAAAGAAGCCTAACCATATTATACCAGGAATACCAGTCTTTTATGTTGTTTCAAGGAACTCAAAATTTTACAAAGAGTTCAAAGCTGGGAGATGGGTTCCTCCTTCATGAGGTTATTTGATGCAACTTTTTGCTTAGGTCAATGCTGGTTCTGTGATTTTGCAAATTTTGTTTTCATGATTGACTTAGGATATGTTAATAATACTTGTTCCAGTGTGCAACTTAAAATATCTTACCATTATTATTATTATTTATTTATTTTACCAAAGTTTTCTTGTTCTTAAGTTGATGTTAATAGTCAATTGAATTCGGTATATGTTTTACTAATGGTTCAAATATGAGTTACCTTCATTTTTATTGAATAAAATTATTAGTAGGAATTATTTATTTAATGTAGAATATATATCAATATAAAATAACTACCGAAGAGGTAAAATAGTTTCTCAAACATAGCATAGCTCAATTGGTTTGAACGTTATAATATTTTTTAGACGAAAAGTTTGC ATGGCGCTATGGATGGAGGATGGTTCGGATCCCTTAACAGAGAACGAGAAAGCTGATCTTGAGGCCATAGCTGCCCTTAAAGAGAGTTCTGCTCTCGAGTTCAAGGAAAAGGGAAATCAATTTGTCAGGTTGGGAAGAAAGCACTATGCTGATGCTATTGATTGCTACACCAGAGCAATAAATCAGAAATCCCTAAGCAACTCTGAGAACTCTATTATTTTTTCAAATCGAGCTCACGTGAATTTACTACTCGGAAACTATAGACGAGCTCTTAACGATGCTGAGGAAGCAATCAATTTGTGTCCCACAAACATCAAGGCAATTTATCGAGCTGCTAAAGCATCTCTTTCCCTGAATTTATTAGATGAAGCAAAGTCCTATTGTGTAAGTGGGATAAAGTGCGACCCAAATAATGTAGAAATCAAAAATCTCGAGAGACAGATTGATTCGCTGAGATTCGAGCAGGAACAACGCGAGGCTTTAGTCACAAAAGCGATTGCAGATGCAAAGAAGCTTGTTTCTGCAATCGTGCAACGAGGTTTGAAGATTGGGAGCGCTTCGTATCAAGAACTAACTGGATTAAGAAAGCCTGTATTAGATAAAAATAACATTCTCCATTGGCCAGTTCTTCTACTGTATGCAGAGGTTATGTCCAGTGACTTCATTGAGGATTTCTATTGTCCACCTTTGCCTTGGGATGCAGAGAACAAATATACCCGTGAAGCAGTTGAACTATACTATGAGGCTGGTTCAGGAATTTGTTTATCGAACGAGAAAATTTTACGGAATCTTCTAGAGGGAACCGCTGCGTCTAATGTTGAAAGCATTGCGCTCGATGAGAAAGATGAAGTTGAAGATTCAAATCATGTCACTTCTGCAAGCTCTTCTAAATGGATCAAAGTCGATGAAAAGACGATGCTTCACGACGTTCTAAAGAAGCCTAACCATATTATACCAGGAATACCAGTCTTTTATGTTGTTTCAAGGAACTCAAAATTTTACAAAGAGTTCAAAGCTGGGAGATGGGTTCCTCCTTCATGA MALWMEDGSDPLTENEKADLEAIAALKESSALEFKEKGNQFVRLGRKHYADAIDCYTRAINQKSLSNSENSIIFSNRAHVNLLLGNYRRALNDAEEAINLCPTNIKAIYRAAKASLSLNLLDEAKSYCVSGIKCDPNNVEIKNLERQIDSLRFEQEQREALVTKAIADAKKLVSAIVQRGLKIGSASYQELTGLRKPVLDKNNILHWPVLLLYAEVMSSDFIEDFYCPPLPWDAENKYTREAVELYYEAGSGICLSNEKILRNLLEGTAASNVESIALDEKDEVEDSNHVTSASSSKWIKVDEKTMLHDVLKKPNHIIPGIPVFYVVSRNSKFYKEFKAGRWVPPS
BLAST of Cp4.1LG15g01090 vs. Swiss-Prot
Match: TTC4_DICDI (Tetratricopeptide repeat protein 4 homolog OS=Dictyostelium discoideum GN=ttc4 PE=3 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 5.0e-33 Identity = 104/343 (30.32%), Postives = 157/343 (45.77%), Query Frame = 1
BLAST of Cp4.1LG15g01090 vs. Swiss-Prot
Match: TTC4_HUMAN (Tetratricopeptide repeat protein 4 OS=Homo sapiens GN=TTC4 PE=1 SV=3) HSP 1 Score: 104.0 bits (258), Expect = 3.4e-21 Identity = 84/292 (28.77%), Postives = 128/292 (43.84%), Query Frame = 1
BLAST of Cp4.1LG15g01090 vs. Swiss-Prot
Match: TTC4_BOVIN (Tetratricopeptide repeat protein 4 OS=Bos taurus GN=TTC4 PE=2 SV=2) HSP 1 Score: 100.1 bits (248), Expect = 4.9e-20 Identity = 84/283 (29.68%), Postives = 126/283 (44.52%), Query Frame = 1
BLAST of Cp4.1LG15g01090 vs. Swiss-Prot
Match: CNS1_SCHPO (Hsp70/Hsp90 co-chaperone cns1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cns1 PE=3 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 4.1e-19 Identity = 77/266 (28.95%), Postives = 124/266 (46.62%), Query Frame = 1
BLAST of Cp4.1LG15g01090 vs. Swiss-Prot
Match: CNS1_YEAST (Hsp70/Hsp90 co-chaperone CNS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CNS1 PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.8e-15 Identity = 86/324 (26.54%), Postives = 144/324 (44.44%), Query Frame = 1
BLAST of Cp4.1LG15g01090 vs. TrEMBL
Match: A0A0A0LDZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G611360 PE=4 SV=1) HSP 1 Score: 521.2 bits (1341), Expect = 9.9e-145 Identity = 261/294 (88.78%), Postives = 280/294 (95.24%), Query Frame = 1
BLAST of Cp4.1LG15g01090 vs. TrEMBL
Match: D7U393_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g04590 PE=4 SV=1) HSP 1 Score: 489.6 bits (1259), Expect = 3.2e-135 Identity = 252/364 (69.23%), Postives = 291/364 (79.95%), Query Frame = 1
BLAST of Cp4.1LG15g01090 vs. TrEMBL
Match: M5XBF5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007535mg PE=4 SV=1) HSP 1 Score: 481.5 bits (1238), Expect = 8.7e-133 Identity = 245/363 (67.49%), Postives = 296/363 (81.54%), Query Frame = 1
BLAST of Cp4.1LG15g01090 vs. TrEMBL
Match: V4TTY0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020743mg PE=4 SV=1) HSP 1 Score: 476.5 bits (1225), Expect = 2.8e-131 Identity = 242/363 (66.67%), Postives = 288/363 (79.34%), Query Frame = 1
BLAST of Cp4.1LG15g01090 vs. TrEMBL
Match: A0A061DQB6_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_003855 PE=4 SV=1) HSP 1 Score: 473.4 bits (1217), Expect = 2.4e-130 Identity = 244/362 (67.40%), Postives = 286/362 (79.01%), Query Frame = 1
BLAST of Cp4.1LG15g01090 vs. TAIR10
Match: AT1G04130.1 (AT1G04130.1 Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 418.7 bits (1075), Expect = 3.5e-117 Identity = 208/362 (57.46%), Postives = 274/362 (75.69%), Query Frame = 1
BLAST of Cp4.1LG15g01090 vs. TAIR10
Match: AT2G42810.2 (AT2G42810.2 protein phosphatase 5.2) HSP 1 Score: 57.4 bits (137), Expect = 2.0e-08 Identity = 46/147 (31.29%), Postives = 73/147 (49.66%), Query Frame = 1
BLAST of Cp4.1LG15g01090 vs. TAIR10
Match: AT1G62740.1 (AT1G62740.1 stress-inducible protein, putative) HSP 1 Score: 55.8 bits (133), Expect = 6.0e-08 Identity = 42/128 (32.81%), Postives = 58/128 (45.31%), Query Frame = 1
BLAST of Cp4.1LG15g01090 vs. TAIR10
Match: AT4G12400.2 (AT4G12400.2 stress-inducible protein, putative) HSP 1 Score: 55.5 bits (132), Expect = 7.8e-08 Identity = 41/113 (36.28%), Postives = 56/113 (49.56%), Query Frame = 1
BLAST of Cp4.1LG15g01090 vs. TAIR10
Match: AT1G12270.1 (AT1G12270.1 stress-inducible protein, putative) HSP 1 Score: 50.4 bits (119), Expect = 2.5e-06 Identity = 40/113 (35.40%), Postives = 57/113 (50.44%), Query Frame = 1
BLAST of Cp4.1LG15g01090 vs. NCBI nr
Match: gi|778681984|ref|XP_011651622.1| (PREDICTED: tetratricopeptide repeat protein 4 homolog [Cucumis sativus]) HSP 1 Score: 597.4 bits (1539), Expect = 1.6e-167 Identity = 304/364 (83.52%), Postives = 328/364 (90.11%), Query Frame = 1
BLAST of Cp4.1LG15g01090 vs. NCBI nr
Match: gi|659093078|ref|XP_008447360.1| (PREDICTED: tetratricopeptide repeat protein 4 homolog [Cucumis melo]) HSP 1 Score: 597.4 bits (1539), Expect = 1.6e-167 Identity = 303/364 (83.24%), Postives = 326/364 (89.56%), Query Frame = 1
BLAST of Cp4.1LG15g01090 vs. NCBI nr
Match: gi|700203178|gb|KGN58311.1| (hypothetical protein Csa_3G611360 [Cucumis sativus]) HSP 1 Score: 521.2 bits (1341), Expect = 1.4e-144 Identity = 261/294 (88.78%), Postives = 280/294 (95.24%), Query Frame = 1
BLAST of Cp4.1LG15g01090 vs. NCBI nr
Match: gi|1009148844|ref|XP_015892156.1| (PREDICTED: tetratricopeptide repeat protein 4 homolog [Ziziphus jujuba]) HSP 1 Score: 501.9 bits (1291), Expect = 8.9e-139 Identity = 256/363 (70.52%), Postives = 294/363 (80.99%), Query Frame = 1
BLAST of Cp4.1LG15g01090 vs. NCBI nr
Match: gi|225437945|ref|XP_002269637.1| (PREDICTED: tetratricopeptide repeat protein 4 homolog [Vitis vinifera]) HSP 1 Score: 489.6 bits (1259), Expect = 4.6e-135 Identity = 252/364 (69.23%), Postives = 291/364 (79.95%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|