Cp4.1LG15g00440 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG15g00440
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptiontRNA isopentenyltransferase
LocationCp4.1LG15 : 295612 .. 296598 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAGTAATTTGGCAATGGTTAACCACGAGCTTCCATTTGGGGAAGTGAACATCAAAGGGTTAACTCCGGCACGGCGGCTGATCAAAGAAAAGCAAAAGGTGGTGGTGGTGATGGGAGCCACCGGCAGCGGAAAATCCCGGCTTTCCATTGACCTAGCCACCCACTTCGCCAATTGTGAAATAATCAACTCCGACAAAATTCAACTCCATGACGGCCTCGACATTGTCACCAACAAAATCACCCCCGACGAGCAACGTGGAGTACCGCATCACTTACTCGGCATAGCCAGCCCTTTCCTAGACTTCGGCATCGCCAAATTCTGCCGCATGGCCACCCTGGCCGCCGACTCCATCGTCCACCGTGCCCACCTCCCAATCATAGTCGGCGGTTCCAACTCCTACGTCGAGGCTTTAGTCGACGATTACCCAACGTTTCGCTCAAAATACGAATGTTGCTTTCTTTGGGTGGACGTTTCGATGCCGCTTCTCCATTCGTCGGTGTCGGACCGAGTGGATAAGATGGTTGAAAATGGACTTGTCGAGGAGGTTCGAAACTTGTTCGACCCGAATAATGTGGATTATTCCCACGGCATCAGGAAGGCAATTGGTGTCCCGGAGCTGGACCGCTACCTTCGCGCATCTAATTCAGACTATGAAATACGAGAGAAGCTACTACAAGAAGCCATTGCGGAGATCAAGGCGAACACGTGTGAGTTGGCGTGTCGCCAAGTGGACAAAATCCTTCGCCTTAGGAATGTCAAAGGCTGGAAGATACACAGGGTGGATGCCACGGAGGCGTTTAGGAAGAAAGGGAAAGAAGGTGACGAGGCGTGGACTAAGCTTGTGGCTGGACCAAGCGCCATGATTGTAGCGCACTTTCTGACCCAACCCCACGGTCAACCCTATCTGAAACATAAGGCTTTCAGAATGCCTTTCAAGAGGGCGCCCACCACCGCCGCCGCCGCCGCCGCCGCCGCCCGTTAG

mRNA sequence

ATGATCAGTAATTTGGCAATGGTTAACCACGAGCTTCCATTTGGGGAAGTGAACATCAAAGGGTTAACTCCGGCACGGCGGCTGATCAAAGAAAAGCAAAAGGTGGTGGTGGTGATGGGAGCCACCGGCAGCGGAAAATCCCGGCTTTCCATTGACCTAGCCACCCACTTCGCCAATTGTGAAATAATCAACTCCGACAAAATTCAACTCCATGACGGCCTCGACATTGTCACCAACAAAATCACCCCCGACGAGCAACGTGGAGTACCGCATCACTTACTCGGCATAGCCAGCCCTTTCCTAGACTTCGGCATCGCCAAATTCTGCCGCATGGCCACCCTGGCCGCCGACTCCATCGTCCACCGTGCCCACCTCCCAATCATAGTCGGCGGTTCCAACTCCTACGTCGAGGCTTTAGTCGACGATTACCCAACGTTTCGCTCAAAATACGAATGTTGCTTTCTTTGGGTGGACGTTTCGATGCCGCTTCTCCATTCGTCGGTGTCGGACCGAGTGGATAAGATGGTTGAAAATGGACTTGTCGAGGAGGTTCGAAACTTGTTCGACCCGAATAATGTGGATTATTCCCACGGCATCAGGAAGGCAATTGGTGTCCCGGAGCTGGACCGCTACCTTCGCGCATCTAATTCAGACTATGAAATACGAGAGAAGCTACTACAAGAAGCCATTGCGGAGATCAAGGCGAACACGTGTGAGTTGGCGTGTCGCCAAGTGGACAAAATCCTTCGCCTTAGGAATGTCAAAGGCTGGAAGATACACAGGGTGGATGCCACGGAGGCGTTTAGGAAGAAAGGGAAAGAAGGTGACGAGGCGTGGACTAAGCTTGTGGCTGGACCAAGCGCCATGATTGTAGCGCACTTTCTGACCCAACCCCACGGTCAACCCTATCTGAAACATAAGGCTTTCAGAATGCCTTTCAAGAGGGCGCCCACCACCGCCGCCGCCGCCGCCGCCGCCGCCCGTTAG

Coding sequence (CDS)

ATGATCAGTAATTTGGCAATGGTTAACCACGAGCTTCCATTTGGGGAAGTGAACATCAAAGGGTTAACTCCGGCACGGCGGCTGATCAAAGAAAAGCAAAAGGTGGTGGTGGTGATGGGAGCCACCGGCAGCGGAAAATCCCGGCTTTCCATTGACCTAGCCACCCACTTCGCCAATTGTGAAATAATCAACTCCGACAAAATTCAACTCCATGACGGCCTCGACATTGTCACCAACAAAATCACCCCCGACGAGCAACGTGGAGTACCGCATCACTTACTCGGCATAGCCAGCCCTTTCCTAGACTTCGGCATCGCCAAATTCTGCCGCATGGCCACCCTGGCCGCCGACTCCATCGTCCACCGTGCCCACCTCCCAATCATAGTCGGCGGTTCCAACTCCTACGTCGAGGCTTTAGTCGACGATTACCCAACGTTTCGCTCAAAATACGAATGTTGCTTTCTTTGGGTGGACGTTTCGATGCCGCTTCTCCATTCGTCGGTGTCGGACCGAGTGGATAAGATGGTTGAAAATGGACTTGTCGAGGAGGTTCGAAACTTGTTCGACCCGAATAATGTGGATTATTCCCACGGCATCAGGAAGGCAATTGGTGTCCCGGAGCTGGACCGCTACCTTCGCGCATCTAATTCAGACTATGAAATACGAGAGAAGCTACTACAAGAAGCCATTGCGGAGATCAAGGCGAACACGTGTGAGTTGGCGTGTCGCCAAGTGGACAAAATCCTTCGCCTTAGGAATGTCAAAGGCTGGAAGATACACAGGGTGGATGCCACGGAGGCGTTTAGGAAGAAAGGGAAAGAAGGTGACGAGGCGTGGACTAAGCTTGTGGCTGGACCAAGCGCCATGATTGTAGCGCACTTTCTGACCCAACCCCACGGTCAACCCTATCTGAAACATAAGGCTTTCAGAATGCCTTTCAAGAGGGCGCCCACCACCGCCGCCGCCGCCGCCGCCGCCGCCCGTTAG

Protein sequence

MISNLAMVNHELPFGEVNIKGLTPARRLIKEKQKVVVVMGATGSGKSRLSIDLATHFANCEIINSDKIQLHDGLDIVTNKITPDEQRGVPHHLLGIASPFLDFGIAKFCRMATLAADSIVHRAHLPIIVGGSNSYVEALVDDYPTFRSKYECCFLWVDVSMPLLHSSVSDRVDKMVENGLVEEVRNLFDPNNVDYSHGIRKAIGVPELDRYLRASNSDYEIREKLLQEAIAEIKANTCELACRQVDKILRLRNVKGWKIHRVDATEAFRKKGKEGDEAWTKLVAGPSAMIVAHFLTQPHGQPYLKHKAFRMPFKRAPTTAAAAAAAAR
Homology
[Close]
BLAST of Cp4.1LG15g00440 vs. Swiss-Prot
Match: IPT3_ARATH (Adenylate isopentenyltransferase 3, chloroplastic OS=Arabidopsis thaliana GN=IPT3 PE=1 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 2.0e-87
Identity = 175/296 (59.12%), Postives = 208/296 (70.27%), Query Frame = 1 

Query: 32  KQKVVVVMGATGSGKSRLSIDLATHFANCEIINSDKIQLHDGLDIVTNKITPDEQRGVPH 91
           K KVVV+MGATG+GKSRLS+D+AT F   EIINSDKIQ+H GLDIVTNKIT +E  GVPH
Sbjct: 40  KDKVVVIMGATGTGKSRLSVDIATRF-RAEIINSDKIQVHQGLDIVTNKITSEESCGVPH 99

Query: 92  HLLGIASPFLDFGIAKFCRMATLAADSIVHRAHLPIIVGGSNSYVEALVDDYPT-FRSKY 151
           HLLG+  P  D   A +C MA L+ +S+++R  LPIIVGGSNSYVEALVDD    FRS+Y
Sbjct: 100 HLLGVLPPEADLTAANYCHMANLSIESVLNRGKLPIIVGGSNSYVEALVDDKENKFRSRY 159

Query: 152 ECCFLWVDVSMPLLHSSVSDRVDKMVENGLVEEVRNLFDPNNVDYSHGIRKAIGVPELDR 211
           +CCFLWVDV++P+LH  VS+RVDKMVE+G+VEEVR  FD +N DYS GI+KAIG PE DR
Sbjct: 160 DCCFLWVDVALPVLHGFVSERVDKMVESGMVEEVREFFDFSNSDYSRGIKKAIGFPEFDR 219

Query: 212 YLRASN-SDYEIREKLLQEAIAEIKANTCELACRQVDKILRLRNVKGWKIHRVDATEAFR 271
           + R     + E RE+LL + + EIK NT ELACRQ +KI RLR VK W I RVDAT  F 
Sbjct: 220 FFRNEQFLNVEDREELLSKVLEEIKRNTFELACRQREKIERLRKVKKWSIQRVDATPVFT 279

Query: 272 KKGKEGDE--AWTKLVAGPSAMIVAHFLTQPHGQPYLKHKAFRMPFKRAPTTAAAA 324
           K+  + D   AW +LVAGPS   V+ FL            A R P   A T  AAA
Sbjct: 280 KRRSKMDANVAWERLVAGPSTDTVSRFLLD---------IASRRPLVEASTAVAAA 325

[Close]
BLAST of Cp4.1LG15g00440 vs. Swiss-Prot
Match: IPT5_ARATH (Adenylate isopentenyltransferase 5, chloroplastic OS=Arabidopsis thaliana GN=IPT5 PE=1 SV=2)

HSP 1 Score: 320.1 bits (819), Expect = 2.9e-86
Identity = 175/316 (55.38%), Postives = 217/316 (68.67%), Query Frame = 1 

Query: 17  VNIKGLTPARRLIKEKQKVVVVMGATGSGKSRLSIDLATHFANCEIINSDKIQLHDGLDI 76
           +N +G        + K KVV VMGATG+GKSRL+IDLAT F   EI+NSDKIQ++ GLDI
Sbjct: 17  LNFQGNMVDVPFFRRKDKVVFVMGATGTGKSRLAIDLATRFP-AEIVNSDKIQVYKGLDI 76

Query: 77  VTNKITPDEQRGVPHHLLG-IASPFLDFGIAKFCRMATLAADSIVHRAHLPIIVGGSNSY 136
           VTNK+TP+E  GVPHHLLG +   + DF    F R A  A +SIV R  +PII GGSNSY
Sbjct: 77  VTNKVTPEESLGVPHHLLGTVHDTYEDFTAEDFQREAIRAVESIVQRDRVPIIAGGSNSY 136

Query: 137 VEALVDDYPTFRSKYECCFLWVDVSMPLLHSSVSDRVDKMVENGLVEEVRNLFDPNNVDY 196
           +EALV+D   FR +Y CCFLWVDVS P+LHS VS+RVDKMV+ GLV+EVR +FDP++ DY
Sbjct: 137 IEALVNDCVDFRLRYNCCFLWVDVSRPVLHSFVSERVDKMVDMGLVDEVRRIFDPSSSDY 196

Query: 197 SHGIRKAIGVPELDRYLRASNSDY--EIREKLLQEAIAEIKANTCELACRQVDKILRLRN 256
           S GIR+AIGVPELD +LR+   +Y  E  E+LL+ AI +IK NTC LACRQ+ KI RL  
Sbjct: 197 SAGIRRAIGVPELDEFLRSEMRNYPAETTERLLETAIEKIKENTCLLACRQLQKIQRLYK 256

Query: 257 VKGWKIHRVDATEAFRKKGKEGDEAWTKLVAGPSAMIVAHFLTQPHGQPYLKHKAFRMP- 316
              W +HRVDATE F ++G+E DEAW   VA PSA+ V  FL+      +L+     +P 
Sbjct: 257 QWKWNMHRVDATEVFLRRGEEADEAWDNSVAHPSALAVEKFLSYSDDH-HLEGANILLPE 316

Query: 317 FKRAPTTAAAAAAAAR 329
               P   AA AA +R
Sbjct: 317 ISAVPPLPAAVAAISR 330

[Close]
BLAST of Cp4.1LG15g00440 vs. Swiss-Prot
Match: IPT7_ARATH (Adenylate isopentenyltransferase 7, mitochondrial OS=Arabidopsis thaliana GN=IPT7 PE=2 SV=2)

HSP 1 Score: 266.5 bits (680), Expect = 3.7e-70
Identity = 152/269 (56.51%), Postives = 189/269 (70.26%), Query Frame = 1 

Query: 32  KQKVVVVMGATGSGKSRLSIDLATHFANCEIINSDKIQLHDGLDIVTNKITPDEQRGVPH 91
           K+KV+ VMGATGSGKSRL+IDLAT F   EIINSDKIQL+ GLD++TNK+TP E RGVPH
Sbjct: 33  KEKVIFVMGATGSGKSRLAIDLATRFQG-EIINSDKIQLYKGLDVLTNKVTPKECRGVPH 92

Query: 92  HLLGIA-SPFLDFGIAKFCRMATLAADSIVHRAHLPIIVGGSNSYVEALVDDYPTFR-SK 151
           HLLG+  S   +    ++ R+A+ A   +     LPI+ GGSNSY+EALV+    F  + 
Sbjct: 93  HLLGVFDSEAGNLTATQYSRLASQAISKLSANNKLPIVAGGSNSYIEALVNHSSGFLLNN 152

Query: 152 YECCFLWVDVSMPLLHSSVSDRVDKMVENGLVEEVRNLFDPNNVDYSHGIRKAIGVPELD 211
           Y+CCF+WVDVS+P+L+S VS RVD+M+E GL+EEVR +F+P   +YS GIR+AIGVPEL 
Sbjct: 153 YDCCFIWVDVSLPVLNSFVSKRVDRMMEAGLLEEVREVFNP-KANYSVGIRRAIGVPELH 212

Query: 212 RYLR-ASNSDYEIREKLLQEAIAEIKANTCELACRQVDKILRLRNVKGWK--IHRVDATE 271
            YLR  S  D   + K+L  A+  IK NT  LACRQ+ KI RL   K WK  +HRVDATE
Sbjct: 213 EYLRNESLVDRATKSKMLDVAVKNIKKNTEILACRQLKKIQRLH--KKWKMSMHRVDATE 272

Query: 272 AFRKKG-KEGDEAWTKLVAGPSAMIVAHF 295
            F K+  +E DEAW  LVA PS  IV  F
Sbjct: 273 VFLKRNVEEQDEAWENLVARPSERIVDKF 297

[Close]
BLAST of Cp4.1LG15g00440 vs. Swiss-Prot
Match: IPT_HUMLU (Adenylate isopentenyltransferase OS=Humulus lupulus PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.5e-58
Identity = 134/309 (43.37%), Postives = 182/309 (58.90%), Query Frame = 1 

Query: 26  RRLIKEKQKVVVVMGATGSGKSRLSIDLATHFANCEIINSDKIQLHDGLDIVTNKITPDE 85
           RR    K+K++V+MGATG+GKSRLSIDLA HF   E+INSDK+Q++ GLDI TNKI+  +
Sbjct: 23  RRQRHRKEKLLVLMGATGTGKSRLSIDLAAHFP-LEVINSDKMQVYKGLDITTNKISVPD 82

Query: 86  QRGVPHHLLGIASPFL-DFGIAKFCRMATLAADSIVHRAHLPIIVGGSNSYVEALVDD-- 145
           + GVPHHLLG   P   +   A F  +A  A   I  R  LP++VGGSNS++ AL+ D  
Sbjct: 83  RGGVPHHLLGEVDPARGELTPADFRSLAGKAVSEITGRRKLPVLVGGSNSFIHALLVDRF 142

Query: 146 --------------YPTFRSKYECCFLWVDVSMPLLHSSVSDRVDKMVENGLVEEVRNLF 205
                           +   +Y+CCFLWVDVS+ +L   ++ RVD M+E G+ +E+   +
Sbjct: 143 DSSGPGVFEEGSHSVVSSELRYDCCFLWVDVSVKVLTDYLAKRVDDMLELGMFDELAEFY 202

Query: 206 DPNNVDYSH------GIRKAIGVPELDRY---LRASNSDYE------IREKLLQEAIAEI 265
            P + D+        G+RKAIGVPE DRY    R  + + E      +R    +EA+  I
Sbjct: 203 SPEDEDHDEDSATRTGLRKAIGVPEFDRYFEKFRPGDVEGEDPGRDRVRRGAFEEAVRAI 262

Query: 266 KANTCELACRQVDKILRLRNVKGWKIHRVDATEAFR-----KKGKEGDEAWTKLVAGPSA 298
           K NTC LA RQ+ KILRL+   GW + R+DATE+FR       G++  E W K V  PS 
Sbjct: 263 KENTCHLAKRQIGKILRLKGA-GWDLRRLDATESFRAAMTSDSGEKCTEIWEKQVLEPSV 322

[Close]
BLAST of Cp4.1LG15g00440 vs. Swiss-Prot
Match: IPT8_ARATH (Adenylate isopentenyltransferase 8, chloroplastic OS=Arabidopsis thaliana GN=IPT8 PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.8e-56
Identity = 130/292 (44.52%), Postives = 181/292 (61.99%), Query Frame = 1 

Query: 32  KQKVVVVMGATGSGKSRLSIDLATHFANCEIINSDKIQLHDGLDIVTNKITPDEQRGVPH 91
           KQKVVV+MGATGSGKS LSIDLAT F+  EI+NSDKIQ +DGL + TN+++  E+ GVPH
Sbjct: 42  KQKVVVIMGATGSGKSCLSIDLATRFSG-EIVNSDKIQFYDGLKVTTNQMSILERCGVPH 101

Query: 92  HLLGIASPF-LDFGIAKFCRMATLAADSIVHRAHLPIIVGGSNSYVEALVDD------YP 151
           HLLG   P   +   ++F  +A+ +   I  R +LPII GGSNS++ AL+ D      YP
Sbjct: 102 HLLGELPPDDSELTTSEFRSLASRSISEITARGNLPIIAGGSNSFIHALLVDRFDPKTYP 161

Query: 152 TFRS--------KYECCFLWVDVSMPLLHSSVSDRVDKMVENGLVEEVRNLFDP---NNV 211
            F S        +YECCFLWVDVS+ +L   +S RVD+M+E+G+ EE+   +DP    + 
Sbjct: 162 -FSSETSISSGLRYECCFLWVDVSVSVLFEYLSKRVDQMMESGMFEELAGFYDPRYSGSA 221

Query: 212 DYSHGIRKAIGVPELDRYL-------RASNSDY-EIREKLLQEAIAEIKANTCELACRQV 271
             +HGI K IG+PE DRY        +   S++ + R+    EA+ EIK NT  LA +Q+
Sbjct: 222 IRAHGIHKTIGIPEFDRYFSLYPPERKQKMSEWDQARKGAYDEAVQEIKENTWRLAKKQI 281

Query: 272 DKILRLRNVKGWKIHRVDATEAFRKKGKEGDEAWTKLVAGPSAMIVAHFLTQ 298
           ++I++L++  GW I R+DAT +F   G+   E W   V   S  +V  FL +
Sbjct: 282 ERIMKLKS-SGWDIQRLDATPSF---GRSSREIWDNTVLDESIKVVKRFLVK 327

[Close]
BLAST of Cp4.1LG15g00440 vs. TrEMBL
Match: F6KSY3_MALDO (Adenylate isopentenyltransferase OS=Malus domestica GN=IPT3a PE=2 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.2e-94
Identity = 176/268 (65.67%), Postives = 214/268 (79.85%), Query Frame = 1 

Query: 30  KEKQKVVVVMGATGSGKSRLSIDLATHFANCEIINSDKIQLHDGLDIVTNKITPDEQRGV 89
           ++K+KVV+VMGATG+GKSRLSIDLAT F   EIINSDK+Q+++GLDIVTNKIT +EQRGV
Sbjct: 30  RQKEKVVIVMGATGTGKSRLSIDLATCFP-AEIINSDKMQVYEGLDIVTNKITKEEQRGV 89

Query: 90  PHHLLGIASPFLDFGIAKFCRMATLAADSIVHRAHLPIIVGGSNSYVEALVDDYP-TFRS 149
           PHHLLG+  P  DF    FC + ++A +SI+ R  LPIIVGGSNSY+EAL+DDY   FRS
Sbjct: 90  PHHLLGMLDPHEDFTARDFCDLTSIAIESILGRDRLPIIVGGSNSYIEALIDDYDYKFRS 149

Query: 150 KYECCFLWVDVSMPLLHSSVSDRVDKMVENGLVEEVRNLFDPNNVDYSHGIRKAIGVPEL 209
           KY+CCFLWVDVS P+LHS VS RVD MV NG+V+E R  FDP N DY+ GIR+AIGVPE 
Sbjct: 150 KYDCCFLWVDVSTPVLHSFVSKRVDHMVHNGMVDEAREYFDP-NADYTKGIRRAIGVPEF 209

Query: 210 DRYLR-ASNSDYEIREKLLQEAIAEIKANTCELACRQVDKILRLRNVKGWKIHRVDATEA 269
           D+Y R     D E R +LL++A+ EIK NTC+LACRQ++KI RLRN+KGW +H +DATE 
Sbjct: 210 DKYFRYGPFLDEETRTRLLRQAVDEIKDNTCKLACRQLEKIHRLRNIKGWNLHPLDATEV 269

Query: 270 FRKKGKEGDEAWTKLVAGPSAMIVAHFL 296
           FRK+G+E DEAW KLV+G SAMIV  FL
Sbjct: 270 FRKRGEEADEAWKKLVSGTSAMIVGQFL 295

[Close]
BLAST of Cp4.1LG15g00440 vs. TrEMBL
Match: A0A088MS25_ROSHC (IPT3 OS=Rosa hybrid cultivar PE=2 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.2e-94
Identity = 190/319 (59.56%), Postives = 231/319 (72.41%), Query Frame = 1 

Query: 9   NHELPFGEVNIKGLTPARRLIKEKQKVVVVMGATGSGKSRLSIDLATHFANCEIINSDKI 68
           N  L  G  +   L     + ++K KVV+VMGATG+GKS+LSIDLAT F   EIINSDK+
Sbjct: 15  NVPLSIGGGHSHNLLDVLNVHRQKDKVVIVMGATGTGKSKLSIDLATRFP-AEIINSDKM 74

Query: 69  QLHDGLDIVTNKITPDEQRGVPHHLLGIASPFLDFGIAKFCRMATLAADSIVHRAHLPII 128
           QL++GLDI TNKI+P EQRGVPHHLLG+  P  DF    FC +  LA +SI++R  LPII
Sbjct: 75  QLYEGLDIATNKISPQEQRGVPHHLLGVLDPNADFSADDFCGITCLAVESILNRDRLPII 134

Query: 129 VGGSNSYVEALVDDY-PTFRSKYECCFLWVDVSMPLLHSSVSDRVDKMVENGLVEEVRNL 188
           VGGSNSY+EAL+D Y   FRS+Y+CCFLWVDVS+P+L S VSDRVD+MVENG+VEEVR  
Sbjct: 135 VGGSNSYIEALIDGYDKMFRSRYDCCFLWVDVSLPVLQSFVSDRVDQMVENGMVEEVREF 194

Query: 189 FDPNNVDYSHGIRKAIGVPELDRYLRASNS-DYEIREKLLQEAIAEIKANTCELACRQVD 248
           FDP   DY+ GIR+AIGVPE D + R   S D E R  LL++AI E+K NTC+LACRQ++
Sbjct: 195 FDP-KADYTKGIRRAIGVPEFDDFFRYGPSLDEETRAWLLEQAINEVKDNTCKLACRQLE 254

Query: 249 KILRLRNVKGWKIHRVDATEAFRKKGKEGDEAWTKLVAGPSAMIVAHFLTQPHGQPYLKH 308
           KI RLRN KGW +H +DATE FRK+GKE DEAW +LV+GPSA+IV  FL     +     
Sbjct: 255 KIRRLRN-KGWSLHPLDATEVFRKRGKEADEAWDRLVSGPSAVIVRQFLYNVKAEVPTNL 314

Query: 309 KAFRMPFKRAPTTAAAAAA 326
            A R+P   A  TAA AAA
Sbjct: 315 TAIRVP--AAMETAALAAA 328

[Close]
BLAST of Cp4.1LG15g00440 vs. TrEMBL
Match: F6KQG7_MALDO (Adenylate isopentenyltransferase OS=Malus domestica GN=IPT3a PE=2 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 2.0e-94
Identity = 175/268 (65.30%), Postives = 215/268 (80.22%), Query Frame = 1 

Query: 30  KEKQKVVVVMGATGSGKSRLSIDLATHFANCEIINSDKIQLHDGLDIVTNKITPDEQRGV 89
           ++K+KVV+VMGATG+GKSRLSIDLAT F   EIINSDK+Q+++GLDIVTNKIT +EQRGV
Sbjct: 30  RQKEKVVIVMGATGTGKSRLSIDLATCFP-AEIINSDKMQVYEGLDIVTNKITKEEQRGV 89

Query: 90  PHHLLGIASPFLDFGIAKFCRMATLAADSIVHRAHLPIIVGGSNSYVEALVDDYP-TFRS 149
           PHHLLG+  P  DF    FC + ++A +SI+ R  LPIIVGGSNSY+EAL+DDY   FRS
Sbjct: 90  PHHLLGMLDPHEDFTARDFCDLTSIAIESILGRDRLPIIVGGSNSYIEALIDDYDYKFRS 149

Query: 150 KYECCFLWVDVSMPLLHSSVSDRVDKMVENGLVEEVRNLFDPNNVDYSHGIRKAIGVPEL 209
           KY+CCFLWVDVS P+LHS VS RVD MV+NG+V+E R  FDP N DY+ GIR+AIGVPE 
Sbjct: 150 KYDCCFLWVDVSTPVLHSFVSKRVDHMVQNGMVDEAREYFDP-NADYTKGIRRAIGVPEF 209

Query: 210 DRYLR-ASNSDYEIREKLLQEAIAEIKANTCELACRQVDKILRLRNVKGWKIHRVDATEA 269
           D+Y R     + E R +LL++A+ EIK NTC+LACRQ++KI RLRN+KGW +H +DATE 
Sbjct: 210 DKYFRYGPFLEEETRARLLRQAVDEIKDNTCKLACRQLEKIHRLRNIKGWNLHPLDATEV 269

Query: 270 FRKKGKEGDEAWTKLVAGPSAMIVAHFL 296
           FRK+G+E DEAW KLV+G SAMIV  FL
Sbjct: 270 FRKRGEEADEAWKKLVSGTSAMIVGQFL 295

[Close]
BLAST of Cp4.1LG15g00440 vs. TrEMBL
Match: Q09Q94_9ROSA (Isopentenyltransferase OS=Malus hupehensis PE=2 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 3.4e-94
Identity = 175/268 (65.30%), Postives = 214/268 (79.85%), Query Frame = 1 

Query: 30  KEKQKVVVVMGATGSGKSRLSIDLATHFANCEIINSDKIQLHDGLDIVTNKITPDEQRGV 89
           ++K+KVV+VMGATG+GKSRLSIDLAT F   EIINSDK+Q+++GLDIVTNKIT +EQRGV
Sbjct: 30  RQKEKVVIVMGATGTGKSRLSIDLATCFP-AEIINSDKMQVYEGLDIVTNKITKEEQRGV 89

Query: 90  PHHLLGIASPFLDFGIAKFCRMATLAADSIVHRAHLPIIVGGSNSYVEALVDDYP-TFRS 149
           PHHLLG+  P  DF    FC + ++A +SI+ R  LPIIVGGSNSY+EAL+DDY   FRS
Sbjct: 90  PHHLLGMLDPHEDFTARDFCDLTSIAIESILGRDRLPIIVGGSNSYIEALIDDYDYKFRS 149

Query: 150 KYECCFLWVDVSMPLLHSSVSDRVDKMVENGLVEEVRNLFDPNNVDYSHGIRKAIGVPEL 209
           KY+CCFLWVDVS P LHS VS RVD MV+NG+V+E R  FDP N DY+ GIR+AIGVPE 
Sbjct: 150 KYDCCFLWVDVSTPALHSFVSKRVDHMVQNGMVDEAREYFDP-NADYTKGIRRAIGVPEF 209

Query: 210 DRYLR-ASNSDYEIREKLLQEAIAEIKANTCELACRQVDKILRLRNVKGWKIHRVDATEA 269
           D+Y R     + E R +LL++A+ EIK NTC+LACRQ++KI RLRN+KGW +H +DATE 
Sbjct: 210 DKYFRYGPFLEEETRARLLRQAVDEIKDNTCKLACRQLEKIHRLRNIKGWNLHPLDATEV 269

Query: 270 FRKKGKEGDEAWTKLVAGPSAMIVAHFL 296
           FRK+G+E DEAW KLV+G SAMIV  FL
Sbjct: 270 FRKRGEEADEAWKKLVSGTSAMIVGQFL 295

[Close]
BLAST of Cp4.1LG15g00440 vs. TrEMBL
Match: A0A0D2R0Z9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G082600 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 5.8e-94
Identity = 181/268 (67.54%), Postives = 209/268 (77.99%), Query Frame = 1 

Query: 30  KEKQKVVVVMGATGSGKSRLSIDLATHFANCEIINSDKIQLHDGLDIVTNKITPDEQRGV 89
           + K+KVV++MGATG+GKSRLSIDLAT F   EIINSDKIQ+H+GLDIVTNKI+ +E+ G+
Sbjct: 33  RHKEKVVILMGATGTGKSRLSIDLATRFP-AEIINSDKIQVHEGLDIVTNKISEEERSGI 92

Query: 90  PHHLLGIASPFLDFGIAKFCRMATLAADSIVHRAHLPIIVGGSNSYVEALVDDYPT-FRS 149
           PHHLLG+ SP +DF +  F  MA+ A  SIV R+ LPII GGSNSY+EALVDD  + FRS
Sbjct: 93  PHHLLGVISPNIDFTVTNFVDMASRATASIVSRSQLPIIAGGSNSYIEALVDDERSRFRS 152

Query: 150 KYECCFLWVDVSMPLLHSSVSDRVDKMVENGLVEEVRNLFDPNNVDYSHGIRKAIGVPEL 209
           KYECCFLWVDV+MP+LH  VS RVDKMVENG+V+E R+ FD  N +YS GIRKAIGVPE 
Sbjct: 153 KYECCFLWVDVAMPVLHQYVSGRVDKMVENGMVDEARSFFD-YNANYSKGIRKAIGVPEF 212

Query: 210 DRYLRASN-SDYEIREKLLQEAIAEIKANTCELACRQVDKILRLRNVKGWKIHRVDATEA 269
           DRY RA    D   R KLLQEAI EIK NTC LACRQ DKI RLRN K W IHR+DATE 
Sbjct: 213 DRYFRAEPFLDKRQRAKLLQEAIQEIKRNTCRLACRQFDKIQRLRNKKNWTIHRLDATEV 272

Query: 270 FRKKGKEGDEAWTKLVAGPSAMIVAHFL 296
           F ++GK  DEAW +LVA PS  IVA FL
Sbjct: 273 FLRRGKGADEAWEELVADPSTEIVAQFL 298

[Close]
BLAST of Cp4.1LG15g00440 vs. TAIR10
Match: AT3G63110.1 (AT3G63110.1 isopentenyltransferase 3)

HSP 1 Score: 323.9 bits (829), Expect = 1.1e-88
Identity = 175/296 (59.12%), Postives = 208/296 (70.27%), Query Frame = 1 

Query: 32  KQKVVVVMGATGSGKSRLSIDLATHFANCEIINSDKIQLHDGLDIVTNKITPDEQRGVPH 91
           K KVVV+MGATG+GKSRLS+D+AT F   EIINSDKIQ+H GLDIVTNKIT +E  GVPH
Sbjct: 40  KDKVVVIMGATGTGKSRLSVDIATRF-RAEIINSDKIQVHQGLDIVTNKITSEESCGVPH 99

Query: 92  HLLGIASPFLDFGIAKFCRMATLAADSIVHRAHLPIIVGGSNSYVEALVDDYPT-FRSKY 151
           HLLG+  P  D   A +C MA L+ +S+++R  LPIIVGGSNSYVEALVDD    FRS+Y
Sbjct: 100 HLLGVLPPEADLTAANYCHMANLSIESVLNRGKLPIIVGGSNSYVEALVDDKENKFRSRY 159

Query: 152 ECCFLWVDVSMPLLHSSVSDRVDKMVENGLVEEVRNLFDPNNVDYSHGIRKAIGVPELDR 211
           +CCFLWVDV++P+LH  VS+RVDKMVE+G+VEEVR  FD +N DYS GI+KAIG PE DR
Sbjct: 160 DCCFLWVDVALPVLHGFVSERVDKMVESGMVEEVREFFDFSNSDYSRGIKKAIGFPEFDR 219

Query: 212 YLRASN-SDYEIREKLLQEAIAEIKANTCELACRQVDKILRLRNVKGWKIHRVDATEAFR 271
           + R     + E RE+LL + + EIK NT ELACRQ +KI RLR VK W I RVDAT  F 
Sbjct: 220 FFRNEQFLNVEDREELLSKVLEEIKRNTFELACRQREKIERLRKVKKWSIQRVDATPVFT 279

Query: 272 KKGKEGDE--AWTKLVAGPSAMIVAHFLTQPHGQPYLKHKAFRMPFKRAPTTAAAA 324
           K+  + D   AW +LVAGPS   V+ FL            A R P   A T  AAA
Sbjct: 280 KRRSKMDANVAWERLVAGPSTDTVSRFLLD---------IASRRPLVEASTAVAAA 325

[Close]
BLAST of Cp4.1LG15g00440 vs. TAIR10
Match: AT5G19040.1 (AT5G19040.1 isopentenyltransferase 5)

HSP 1 Score: 320.1 bits (819), Expect = 1.6e-87
Identity = 175/316 (55.38%), Postives = 217/316 (68.67%), Query Frame = 1 

Query: 17  VNIKGLTPARRLIKEKQKVVVVMGATGSGKSRLSIDLATHFANCEIINSDKIQLHDGLDI 76
           +N +G        + K KVV VMGATG+GKSRL+IDLAT F   EI+NSDKIQ++ GLDI
Sbjct: 17  LNFQGNMVDVPFFRRKDKVVFVMGATGTGKSRLAIDLATRFP-AEIVNSDKIQVYKGLDI 76

Query: 77  VTNKITPDEQRGVPHHLLG-IASPFLDFGIAKFCRMATLAADSIVHRAHLPIIVGGSNSY 136
           VTNK+TP+E  GVPHHLLG +   + DF    F R A  A +SIV R  +PII GGSNSY
Sbjct: 77  VTNKVTPEESLGVPHHLLGTVHDTYEDFTAEDFQREAIRAVESIVQRDRVPIIAGGSNSY 136

Query: 137 VEALVDDYPTFRSKYECCFLWVDVSMPLLHSSVSDRVDKMVENGLVEEVRNLFDPNNVDY 196
           +EALV+D   FR +Y CCFLWVDVS P+LHS VS+RVDKMV+ GLV+EVR +FDP++ DY
Sbjct: 137 IEALVNDCVDFRLRYNCCFLWVDVSRPVLHSFVSERVDKMVDMGLVDEVRRIFDPSSSDY 196

Query: 197 SHGIRKAIGVPELDRYLRASNSDY--EIREKLLQEAIAEIKANTCELACRQVDKILRLRN 256
           S GIR+AIGVPELD +LR+   +Y  E  E+LL+ AI +IK NTC LACRQ+ KI RL  
Sbjct: 197 SAGIRRAIGVPELDEFLRSEMRNYPAETTERLLETAIEKIKENTCLLACRQLQKIQRLYK 256

Query: 257 VKGWKIHRVDATEAFRKKGKEGDEAWTKLVAGPSAMIVAHFLTQPHGQPYLKHKAFRMP- 316
              W +HRVDATE F ++G+E DEAW   VA PSA+ V  FL+      +L+     +P 
Sbjct: 257 QWKWNMHRVDATEVFLRRGEEADEAWDNSVAHPSALAVEKFLSYSDDH-HLEGANILLPE 316

Query: 317 FKRAPTTAAAAAAAAR 329
               P   AA AA +R
Sbjct: 317 ISAVPPLPAAVAAISR 330

[Close]
BLAST of Cp4.1LG15g00440 vs. TAIR10
Match: AT3G23630.1 (AT3G23630.1 isopentenyltransferase 7)

HSP 1 Score: 266.5 bits (680), Expect = 2.1e-71
Identity = 152/269 (56.51%), Postives = 189/269 (70.26%), Query Frame = 1 

Query: 32  KQKVVVVMGATGSGKSRLSIDLATHFANCEIINSDKIQLHDGLDIVTNKITPDEQRGVPH 91
           K+KV+ VMGATGSGKSRL+IDLAT F   EIINSDKIQL+ GLD++TNK+TP E RGVPH
Sbjct: 33  KEKVIFVMGATGSGKSRLAIDLATRFQG-EIINSDKIQLYKGLDVLTNKVTPKECRGVPH 92

Query: 92  HLLGIA-SPFLDFGIAKFCRMATLAADSIVHRAHLPIIVGGSNSYVEALVDDYPTFR-SK 151
           HLLG+  S   +    ++ R+A+ A   +     LPI+ GGSNSY+EALV+    F  + 
Sbjct: 93  HLLGVFDSEAGNLTATQYSRLASQAISKLSANNKLPIVAGGSNSYIEALVNHSSGFLLNN 152

Query: 152 YECCFLWVDVSMPLLHSSVSDRVDKMVENGLVEEVRNLFDPNNVDYSHGIRKAIGVPELD 211
           Y+CCF+WVDVS+P+L+S VS RVD+M+E GL+EEVR +F+P   +YS GIR+AIGVPEL 
Sbjct: 153 YDCCFIWVDVSLPVLNSFVSKRVDRMMEAGLLEEVREVFNP-KANYSVGIRRAIGVPELH 212

Query: 212 RYLR-ASNSDYEIREKLLQEAIAEIKANTCELACRQVDKILRLRNVKGWK--IHRVDATE 271
            YLR  S  D   + K+L  A+  IK NT  LACRQ+ KI RL   K WK  +HRVDATE
Sbjct: 213 EYLRNESLVDRATKSKMLDVAVKNIKKNTEILACRQLKKIQRLH--KKWKMSMHRVDATE 272

Query: 272 AFRKKG-KEGDEAWTKLVAGPSAMIVAHF 295
            F K+  +E DEAW  LVA PS  IV  F
Sbjct: 273 VFLKRNVEEQDEAWENLVARPSERIVDKF 297

[Close]
BLAST of Cp4.1LG15g00440 vs. TAIR10
Match: AT3G19160.1 (AT3G19160.1 ATP/ADP isopentenyltransferases)

HSP 1 Score: 221.1 bits (562), Expect = 1.0e-57
Identity = 130/292 (44.52%), Postives = 181/292 (61.99%), Query Frame = 1 

Query: 32  KQKVVVVMGATGSGKSRLSIDLATHFANCEIINSDKIQLHDGLDIVTNKITPDEQRGVPH 91
           KQKVVV+MGATGSGKS LSIDLAT F+  EI+NSDKIQ +DGL + TN+++  E+ GVPH
Sbjct: 42  KQKVVVIMGATGSGKSCLSIDLATRFSG-EIVNSDKIQFYDGLKVTTNQMSILERCGVPH 101

Query: 92  HLLGIASPF-LDFGIAKFCRMATLAADSIVHRAHLPIIVGGSNSYVEALVDD------YP 151
           HLLG   P   +   ++F  +A+ +   I  R +LPII GGSNS++ AL+ D      YP
Sbjct: 102 HLLGELPPDDSELTTSEFRSLASRSISEITARGNLPIIAGGSNSFIHALLVDRFDPKTYP 161

Query: 152 TFRS--------KYECCFLWVDVSMPLLHSSVSDRVDKMVENGLVEEVRNLFDP---NNV 211
            F S        +YECCFLWVDVS+ +L   +S RVD+M+E+G+ EE+   +DP    + 
Sbjct: 162 -FSSETSISSGLRYECCFLWVDVSVSVLFEYLSKRVDQMMESGMFEELAGFYDPRYSGSA 221

Query: 212 DYSHGIRKAIGVPELDRYL-------RASNSDY-EIREKLLQEAIAEIKANTCELACRQV 271
             +HGI K IG+PE DRY        +   S++ + R+    EA+ EIK NT  LA +Q+
Sbjct: 222 IRAHGIHKTIGIPEFDRYFSLYPPERKQKMSEWDQARKGAYDEAVQEIKENTWRLAKKQI 281

Query: 272 DKILRLRNVKGWKIHRVDATEAFRKKGKEGDEAWTKLVAGPSAMIVAHFLTQ 298
           ++I++L++  GW I R+DAT +F   G+   E W   V   S  +V  FL +
Sbjct: 282 ERIMKLKS-SGWDIQRLDATPSF---GRSSREIWDNTVLDESIKVVKRFLVK 327

[Close]
BLAST of Cp4.1LG15g00440 vs. TAIR10
Match: AT1G68460.1 (AT1G68460.1 isopentenyltransferase 1)

HSP 1 Score: 216.1 bits (549), Expect = 3.3e-56
Identity = 128/295 (43.39%), Postives = 179/295 (60.68%), Query Frame = 1 

Query: 32  KQKVVVVMGATGSGKSRLSIDLATHFANCEIINSDKIQLHDGLDIVTNKITPDEQRGVPH 91
           K KVVV++GATG+GKSRLS+DLAT F + EIINSDKIQ+++GL+I TN+IT  ++RGVPH
Sbjct: 64  KDKVVVILGATGAGKSRLSVDLATRFPS-EIINSDKIQVYEGLEITTNQITLQDRRGVPH 123

Query: 92  HLLGIASP-FLDFGIAKFCRMATLAADSIVHRAHLPIIVGGSNSYVEALV-----DDYPT 151
           HLLG+ +P   +    +F   A+     I  R  +PII GGSNS+V AL+       +  
Sbjct: 124 HLLGVINPEHGELTAGEFRSAASNVVKEITSRQKVPIIAGGSNSFVHALLAQRFDPKFDP 183

Query: 152 FRS---------KYECCFLWVDVSMPLLHSSVSDRVDKMVENGLVEEVRNLFDP--NNVD 211
           F S         +YECCF+WVDVS  +L+  +  RVD+M+++G+ EE+   +DP  + ++
Sbjct: 184 FSSGSCLISSDLRYECCFIWVDVSETVLYEYLLRRVDEMMDSGMFEELSRFYDPVKSGLE 243

Query: 212 YSHGIRKAIGVPELDRYLRASNSDYE------IREKLLQEAIAEIKANTCELACRQVDKI 271
              GIRKAIGVPE D Y +    + +      +R+    +A+ +IK NT  LA RQV KI
Sbjct: 244 TRFGIRKAIGVPEFDGYFKEYPPEKKMIKWDALRKAAYDKAVDDIKRNTWTLAKRQVKKI 303

Query: 272 LRLRNVKGWKIHRVDATEAFR------KKGKEGDEAWTKLVAGPSAMIVAHFLTQ 298
             L++  GW+I RVDAT +F+         K+  E W + V  PS  IV   L Q
Sbjct: 304 EMLKDA-GWEIERVDATASFKAVMMKSSSEKKWRENWEEQVLEPSVKIVKRHLVQ 356

[Close]
BLAST of Cp4.1LG15g00440 vs. NCBI nr
Match: gi|694332220|ref|XP_009356755.1| (PREDICTED: adenylate isopentenyltransferase 3, chloroplastic [Pyrus x bretschneideri])

HSP 1 Score: 357.8 bits (917), Expect = 2.0e-95
Identity = 187/300 (62.33%), Postives = 228/300 (76.00%), Query Frame = 1 

Query: 30  KEKQKVVVVMGATGSGKSRLSIDLATHFANCEIINSDKIQLHDGLDIVTNKITPDEQRGV 89
           ++K+KVV+VMGATG+GKSRLSIDLAT F   EIINSDK+Q+++GLDIVTNKIT +EQRGV
Sbjct: 18  RQKEKVVIVMGATGTGKSRLSIDLATCFP-AEIINSDKMQVYEGLDIVTNKITKEEQRGV 77

Query: 90  PHHLLGIASPFLDFGIAKFCRMATLAADSIVHRAHLPIIVGGSNSYVEALVDDYP-TFRS 149
           PHHLLGI  P  DF    FC + +LA +S++ R  LPIIVGGSNSY+EALVDD+   FRS
Sbjct: 78  PHHLLGILDPNEDFTARDFCDLTSLAIESVLGRDRLPIIVGGSNSYIEALVDDHDYKFRS 137

Query: 150 KYECCFLWVDVSMPLLHSSVSDRVDKMVENGLVEEVRNLFDPNNVDYSHGIRKAIGVPEL 209
           KYECCFLWVDVS+P++HS VS RVD+MV+NG+V+E R  FDP N DY  GIR+AIGVPE 
Sbjct: 138 KYECCFLWVDVSVPVMHSFVSGRVDRMVQNGMVDEAREFFDP-NADYMKGIRRAIGVPEF 197

Query: 210 DRYLR-ASNSDYEIREKLLQEAIAEIKANTCELACRQVDKILRLRNVKGWKIHRVDATEA 269
           D+Y R     D E R +LLQ+A+ EIK NTC+LACRQ++KI RLRN+KGW +H +DATE 
Sbjct: 198 DKYFRYGPLLDEETRARLLQQAVDEIKDNTCKLACRQLEKIHRLRNIKGWNLHPLDATEV 257

Query: 270 FRKKGKEGDEAWTKLVAGPSAMIVAHFLTQPHGQPYLKHKAFRMPFKRAPTTAAAAAAAA 328
           FRK+GKE DEAW KLV+GP AMIV  FL     +      + R+P       AA AAA+A
Sbjct: 258 FRKRGKEADEAWEKLVSGPGAMIVGQFLYNMTAEVPPHIGSLRVP-------AALAAASA 308

[Close]
BLAST of Cp4.1LG15g00440 vs. NCBI nr
Match: gi|684058038|gb|AIN44214.1| (IPT3 [Rosa hybrid cultivar])

HSP 1 Score: 354.8 bits (909), Expect = 1.7e-94
Identity = 190/319 (59.56%), Postives = 231/319 (72.41%), Query Frame = 1 

Query: 9   NHELPFGEVNIKGLTPARRLIKEKQKVVVVMGATGSGKSRLSIDLATHFANCEIINSDKI 68
           N  L  G  +   L     + ++K KVV+VMGATG+GKS+LSIDLAT F   EIINSDK+
Sbjct: 15  NVPLSIGGGHSHNLLDVLNVHRQKDKVVIVMGATGTGKSKLSIDLATRFP-AEIINSDKM 74

Query: 69  QLHDGLDIVTNKITPDEQRGVPHHLLGIASPFLDFGIAKFCRMATLAADSIVHRAHLPII 128
           QL++GLDI TNKI+P EQRGVPHHLLG+  P  DF    FC +  LA +SI++R  LPII
Sbjct: 75  QLYEGLDIATNKISPQEQRGVPHHLLGVLDPNADFSADDFCGITCLAVESILNRDRLPII 134

Query: 129 VGGSNSYVEALVDDY-PTFRSKYECCFLWVDVSMPLLHSSVSDRVDKMVENGLVEEVRNL 188
           VGGSNSY+EAL+D Y   FRS+Y+CCFLWVDVS+P+L S VSDRVD+MVENG+VEEVR  
Sbjct: 135 VGGSNSYIEALIDGYDKMFRSRYDCCFLWVDVSLPVLQSFVSDRVDQMVENGMVEEVREF 194

Query: 189 FDPNNVDYSHGIRKAIGVPELDRYLRASNS-DYEIREKLLQEAIAEIKANTCELACRQVD 248
           FDP   DY+ GIR+AIGVPE D + R   S D E R  LL++AI E+K NTC+LACRQ++
Sbjct: 195 FDP-KADYTKGIRRAIGVPEFDDFFRYGPSLDEETRAWLLEQAINEVKDNTCKLACRQLE 254

Query: 249 KILRLRNVKGWKIHRVDATEAFRKKGKEGDEAWTKLVAGPSAMIVAHFLTQPHGQPYLKH 308
           KI RLRN KGW +H +DATE FRK+GKE DEAW +LV+GPSA+IV  FL     +     
Sbjct: 255 KIRRLRN-KGWSLHPLDATEVFRKRGKEADEAWDRLVSGPSAVIVRQFLYNVKAEVPTNL 314

Query: 309 KAFRMPFKRAPTTAAAAAA 326
            A R+P   A  TAA AAA
Sbjct: 315 TAIRVP--AAMETAALAAA 328

[Close]
BLAST of Cp4.1LG15g00440 vs. NCBI nr
Match: gi|315143145|gb|ADT82707.1| (adenylate isopentenyltransferase [Malus domestica])

HSP 1 Score: 354.8 bits (909), Expect = 1.7e-94
Identity = 176/268 (65.67%), Postives = 214/268 (79.85%), Query Frame = 1 

Query: 30  KEKQKVVVVMGATGSGKSRLSIDLATHFANCEIINSDKIQLHDGLDIVTNKITPDEQRGV 89
           ++K+KVV+VMGATG+GKSRLSIDLAT F   EIINSDK+Q+++GLDIVTNKIT +EQRGV
Sbjct: 30  RQKEKVVIVMGATGTGKSRLSIDLATCFP-AEIINSDKMQVYEGLDIVTNKITKEEQRGV 89

Query: 90  PHHLLGIASPFLDFGIAKFCRMATLAADSIVHRAHLPIIVGGSNSYVEALVDDYP-TFRS 149
           PHHLLG+  P  DF    FC + ++A +SI+ R  LPIIVGGSNSY+EAL+DDY   FRS
Sbjct: 90  PHHLLGMLDPHEDFTARDFCDLTSIAIESILGRDRLPIIVGGSNSYIEALIDDYDYKFRS 149

Query: 150 KYECCFLWVDVSMPLLHSSVSDRVDKMVENGLVEEVRNLFDPNNVDYSHGIRKAIGVPEL 209
           KY+CCFLWVDVS P+LHS VS RVD MV NG+V+E R  FDP N DY+ GIR+AIGVPE 
Sbjct: 150 KYDCCFLWVDVSTPVLHSFVSKRVDHMVHNGMVDEAREYFDP-NADYTKGIRRAIGVPEF 209

Query: 210 DRYLR-ASNSDYEIREKLLQEAIAEIKANTCELACRQVDKILRLRNVKGWKIHRVDATEA 269
           D+Y R     D E R +LL++A+ EIK NTC+LACRQ++KI RLRN+KGW +H +DATE 
Sbjct: 210 DKYFRYGPFLDEETRTRLLRQAVDEIKDNTCKLACRQLEKIHRLRNIKGWNLHPLDATEV 269

Query: 270 FRKKGKEGDEAWTKLVAGPSAMIVAHFL 296
           FRK+G+E DEAW KLV+G SAMIV  FL
Sbjct: 270 FRKRGEEADEAWKKLVSGTSAMIVGQFL 295

[Close]
BLAST of Cp4.1LG15g00440 vs. NCBI nr
Match: gi|325112793|gb|ADY80558.1| (adenylate isopentenyltransferase [Malus domestica])

HSP 1 Score: 354.0 bits (907), Expect = 2.8e-94
Identity = 175/268 (65.30%), Postives = 215/268 (80.22%), Query Frame = 1 

Query: 30  KEKQKVVVVMGATGSGKSRLSIDLATHFANCEIINSDKIQLHDGLDIVTNKITPDEQRGV 89
           ++K+KVV+VMGATG+GKSRLSIDLAT F   EIINSDK+Q+++GLDIVTNKIT +EQRGV
Sbjct: 30  RQKEKVVIVMGATGTGKSRLSIDLATCFP-AEIINSDKMQVYEGLDIVTNKITKEEQRGV 89

Query: 90  PHHLLGIASPFLDFGIAKFCRMATLAADSIVHRAHLPIIVGGSNSYVEALVDDYP-TFRS 149
           PHHLLG+  P  DF    FC + ++A +SI+ R  LPIIVGGSNSY+EAL+DDY   FRS
Sbjct: 90  PHHLLGMLDPHEDFTARDFCDLTSIAIESILGRDRLPIIVGGSNSYIEALIDDYDYKFRS 149

Query: 150 KYECCFLWVDVSMPLLHSSVSDRVDKMVENGLVEEVRNLFDPNNVDYSHGIRKAIGVPEL 209
           KY+CCFLWVDVS P+LHS VS RVD MV+NG+V+E R  FDP N DY+ GIR+AIGVPE 
Sbjct: 150 KYDCCFLWVDVSTPVLHSFVSKRVDHMVQNGMVDEAREYFDP-NADYTKGIRRAIGVPEF 209

Query: 210 DRYLR-ASNSDYEIREKLLQEAIAEIKANTCELACRQVDKILRLRNVKGWKIHRVDATEA 269
           D+Y R     + E R +LL++A+ EIK NTC+LACRQ++KI RLRN+KGW +H +DATE 
Sbjct: 210 DKYFRYGPFLEEETRARLLRQAVDEIKDNTCKLACRQLEKIHRLRNIKGWNLHPLDATEV 269

Query: 270 FRKKGKEGDEAWTKLVAGPSAMIVAHFL 296
           FRK+G+E DEAW KLV+G SAMIV  FL
Sbjct: 270 FRKRGEEADEAWKKLVSGTSAMIVGQFL 295

[Close]
BLAST of Cp4.1LG15g00440 vs. NCBI nr
Match: gi|110671857|gb|ABG82043.1| (isopentenyltransferase [Malus hupehensis])

HSP 1 Score: 353.2 bits (905), Expect = 4.9e-94
Identity = 175/268 (65.30%), Postives = 214/268 (79.85%), Query Frame = 1 

Query: 30  KEKQKVVVVMGATGSGKSRLSIDLATHFANCEIINSDKIQLHDGLDIVTNKITPDEQRGV 89
           ++K+KVV+VMGATG+GKSRLSIDLAT F   EIINSDK+Q+++GLDIVTNKIT +EQRGV
Sbjct: 30  RQKEKVVIVMGATGTGKSRLSIDLATCFP-AEIINSDKMQVYEGLDIVTNKITKEEQRGV 89

Query: 90  PHHLLGIASPFLDFGIAKFCRMATLAADSIVHRAHLPIIVGGSNSYVEALVDDYP-TFRS 149
           PHHLLG+  P  DF    FC + ++A +SI+ R  LPIIVGGSNSY+EAL+DDY   FRS
Sbjct: 90  PHHLLGMLDPHEDFTARDFCDLTSIAIESILGRDRLPIIVGGSNSYIEALIDDYDYKFRS 149

Query: 150 KYECCFLWVDVSMPLLHSSVSDRVDKMVENGLVEEVRNLFDPNNVDYSHGIRKAIGVPEL 209
           KY+CCFLWVDVS P LHS VS RVD MV+NG+V+E R  FDP N DY+ GIR+AIGVPE 
Sbjct: 150 KYDCCFLWVDVSTPALHSFVSKRVDHMVQNGMVDEAREYFDP-NADYTKGIRRAIGVPEF 209

Query: 210 DRYLR-ASNSDYEIREKLLQEAIAEIKANTCELACRQVDKILRLRNVKGWKIHRVDATEA 269
           D+Y R     + E R +LL++A+ EIK NTC+LACRQ++KI RLRN+KGW +H +DATE 
Sbjct: 210 DKYFRYGPFLEEETRARLLRQAVDEIKDNTCKLACRQLEKIHRLRNIKGWNLHPLDATEV 269

Query: 270 FRKKGKEGDEAWTKLVAGPSAMIVAHFL 296
           FRK+G+E DEAW KLV+G SAMIV  FL
Sbjct: 270 FRKRGEEADEAWKKLVSGTSAMIVGQFL 295

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g00440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IPT3_ARATH2.0e-8759.12Adenylate isopentenyltransferase 3, chloroplastic OS=Arabidopsis thaliana GN=IPT... [more]
IPT5_ARATH2.9e-8655.38Adenylate isopentenyltransferase 5, chloroplastic OS=Arabidopsis thaliana GN=IPT... [more]
IPT7_ARATH3.7e-7056.51Adenylate isopentenyltransferase 7, mitochondrial OS=Arabidopsis thaliana GN=IPT... [more]
IPT_HUMLU1.5e-5843.37Adenylate isopentenyltransferase OS=Humulus lupulus PE=1 SV=1[more]
IPT8_ARATH1.8e-5644.52Adenylate isopentenyltransferase 8, chloroplastic OS=Arabidopsis thaliana GN=IPT... [more]
BLAST of Cp4.1LG15g00440 vs. TrEMBL
Match NameE-valueIdentityDescription
F6KSY3_MALDO1.2e-9465.67Adenylate isopentenyltransferase OS=Malus domestica GN=IPT3a PE=2 SV=1[more]
A0A088MS25_ROSHC1.2e-9459.56IPT3 OS=Rosa hybrid cultivar PE=2 SV=1[more]
F6KQG7_MALDO2.0e-9465.30Adenylate isopentenyltransferase OS=Malus domestica GN=IPT3a PE=2 SV=1[more]
Q09Q94_9ROSA3.4e-9465.30Isopentenyltransferase OS=Malus hupehensis PE=2 SV=1[more]
A0A0D2R0Z9_GOSRA5.8e-9467.54Uncharacterized protein OS=Gossypium raimondii GN=B456_004G082600 PE=4 SV=1[more]
BLAST of Cp4.1LG15g00440 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G63110.11.1e-8859.12 isopentenyltransferase 3[more]
AT5G19040.11.6e-8755.38 isopentenyltransferase 5[more]
AT3G23630.12.1e-7156.51 isopentenyltransferase 7[more]
AT3G19160.11.0e-5744.52 ATP/ADP isopentenyltransferases[more]
AT1G68460.13.3e-5643.39 isopentenyltransferase 1[more]
BLAST of Cp4.1LG15g00440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|694332220|ref|XP_009356755.1|2.0e-9562.33PREDICTED: adenylate isopentenyltransferase 3, chloroplastic [Pyrus x bretschnei... [more]
gi|684058038|gb|AIN44214.1|1.7e-9459.56IPT3 [Rosa hybrid cultivar][more]
gi|315143145|gb|ADT82707.1|1.7e-9465.67adenylate isopentenyltransferase [Malus domestica][more]
gi|325112793|gb|ADY80558.1|2.8e-9465.30adenylate isopentenyltransferase [Malus domestica][more]
gi|110671857|gb|ABG82043.1|4.9e-9465.30isopentenyltransferase [Malus hupehensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR018022IPT
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008033 tRNA processing
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005575 cellular_component
molecular_function GO:0016740 transferase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g00440.1Cp4.1LG15g00440.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018022tRNA dimethylallyltransferasePFAMPF01715IPPTcoord: 152..245
score: 4.2E-12coord: 69..146
score: 2.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 32..148
score: 5.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 34..189
score: 4.12
NoneNo IPR availableGENE3DG3DSA:1.10.287.890coord: 163..245
score: 7.0
NoneNo IPR availablePANTHERPTHR11088TRNA DELTA 2 -ISOPENTENYLPYROPHOSPHATE TRANSFERASE-RELATEDcoord: 22..295
score: 7.2E
NoneNo IPR availablePANTHERPTHR11088:SF30ADENYLATE ISOPENTENYLTRANSFERASE 3, CHLOROPLASTICcoord: 22..295
score: 7.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g00440CmaCh19G000500Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g00440CmaCh17G011650Cucurbita maxima (Rimu)cmacpeB374
Cp4.1LG15g00440CmoCh17G011400Cucurbita moschata (Rifu)cmocpeB337
Cp4.1LG15g00440CmoCh19G000490Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g00440Cla014749Watermelon (97103) v1cpewmB244
Cp4.1LG15g00440MELO3C015852Melon (DHL92) v3.5.1cpemeB222
Cp4.1LG15g00440ClCG09G006930Watermelon (Charleston Gray)cpewcgB226
Cp4.1LG15g00440Lsi02G023050Bottle gourd (USVL1VR-Ls)cpelsiB203
Cp4.1LG15g00440Carg07237Silver-seed gourdcarcpeB0160
Cp4.1LG15g00440Carg16850Silver-seed gourdcarcpeB1057
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG15g00440Cp4.1LG17g01230Cucurbita pepo (Zucchini)cpecpeB259
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG15g00440Wax gourdcpewgoB0321
Cp4.1LG15g00440Cucurbita pepo (Zucchini)cpecpeB154
Cp4.1LG15g00440Cucurbita pepo (Zucchini)cpecpeB273
Cp4.1LG15g00440Cucumber (Gy14) v1cgycpeB0507
Cp4.1LG15g00440Cucurbita maxima (Rimu)cmacpeB373
Cp4.1LG15g00440Cucurbita maxima (Rimu)cmacpeB615
Cp4.1LG15g00440Cucurbita moschata (Rifu)cmocpeB564
Cp4.1LG15g00440Wild cucumber (PI 183967)cpecpiB240
Cp4.1LG15g00440Wild cucumber (PI 183967)cpecpiB254
Cp4.1LG15g00440Cucumber (Chinese Long) v2cpecuB236
Cp4.1LG15g00440Cucumber (Chinese Long) v2cpecuB253
Cp4.1LG15g00440Bottle gourd (USVL1VR-Ls)cpelsiB192
Cp4.1LG15g00440Bottle gourd (USVL1VR-Ls)cpelsiB211
Cp4.1LG15g00440Bottle gourd (USVL1VR-Ls)cpelsiB209
Cp4.1LG15g00440Watermelon (Charleston Gray)cpewcgB239
Cp4.1LG15g00440Watermelon (Charleston Gray)cpewcgB240
Cp4.1LG15g00440Watermelon (Charleston Gray)cpewcgB242
Cp4.1LG15g00440Watermelon (97103) v1cpewmB253
Cp4.1LG15g00440Watermelon (97103) v1cpewmB272
Cp4.1LG15g00440Melon (DHL92) v3.5.1cpemeB239
Cp4.1LG15g00440Cucumber (Gy14) v2cgybcpeB190
Cp4.1LG15g00440Cucumber (Gy14) v2cgybcpeB753
Cp4.1LG15g00440Cucumber (Chinese Long) v3cpecucB0294
Cp4.1LG15g00440Cucumber (Chinese Long) v3cpecucB0320