Cp4.1LG15g00030 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG15g00030
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMediator of RNA polymerase II transcription subunit 33A
LocationCp4.1LG15 : 70610 .. 83069 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAACCAGGGTTCAAATCTAATTTGATTTCTTCAATTACTTAAACCAGGGTTTTCTTCTTCCATCATTTTACGCGCCGCGAACAATTTCATGTACCTCTAAATTTTGGACATACACGAGAATGAACCCCAAATGTTTTCTCAAATAACTTCAATCTACTCACCCTGAATCTCTTTTCCATCCATTATTCCCTTTCCCTGAGCAAGAAATTCTGTGGGTCAGATTCTCCCATGGCGGTTTCCGCTCAACCGCCCGGTCAACTGCAGGGGATCGCTGGTGTTTGGGACACTGTGTTGGAGCTTACCAAGTCGGCGCAGGAGAAGAACAGCGATCCACTGCTTTGGGCGGTTCAGCTCAGCTCCAGCCTCAATTCGGCTAGTGTTTCCTTGCCGTCTGTCGAGCTCGCCCACCTCTTGGTCTCTCATATTTGTTGGGACAATCACGTTCCGATCATGTGGAAATTCCTTGAGAAGGCAATGACCGCCAGAATCGTTCCTCCCCTGCTGGTTATTGCTCTTCTTTCTACCAGGTCTCATTTGTTCTAGCATTTTGATTAAAGCTTCTTCGCTTCCTCGAATTGTTATTTAAATGTATCATATTGAGTGCTTCATTAGTAATACTTTGAATTTGCTTATGGTTTCTTTATGTATCCGCGTGGACATTTGTGAAAATAAGTTACCGTATGCTTAGATTTCGTGCGTTGTTGGGTAACTGCCTTTCTGCTTGCACATCATCCATAATCAGCTATAATTTCGTTGTGCTGTAGTTGTCTACTGTTGATATATGTTCTAGTCTGTATCTGTTGCCTCTTGTCCAATAATTCACTTCAATTTGCATCAGATACTGGCTTTGAGTGTGGAAGATCATTTTATTTTTCTTCCTCTTTTGTTATACTTCGATTTTTCTCATCCACTATTCACCGTCCAAAGCTGACATATACCACATTTCAGGGCAATTCCATACAGAAAGCTTCGACCTGCAGCATACAGGCTTTACCTGGAACTTCTAAGCAGACACGTCTTTTCATCAACATTGGAAGTCAATGGACCCAATTACCCAAGGTAGATTTCATTGCAGTTTACTCGTGTCATTATAGTGGTTAGCCACATTCTCTTTTCATTCTGTTTAACCATTTTTCTTTCTCGATGGTAAACCTAGAGGAAAGCTTTTGCCTTGAGAGGCATTTGGCTGTATAACTCTAAGCAAAGCCAACCACGTCCACATAATGTTCCTTCCTGGAGAAAGACACTAGCTAGGAAGTCTATTTTGAGTTTTATCATGAGTATTGATACCCGCGTGGGGCAAGCTCCAATTAAAAGAAGAAGTTCACTTTGTTGAGGTTTTTAGAGTGCTGGATCACCTTATAAAGGCTAGGGTTCAACAAGTTTCTTTTATTGACAATATCCTTTAGCACGGAATTCCTAGATAGAAATCCTGTTAACATCAAGCTTATCTCTTCAATCTTTCTAATTATCTTCCTTTATGGTTGTTTTGAATTTTCGATTCCTTTTTTTTTTATATATAAAAAAATACGTATTAAAAAATAATGGGAGAAATGCCTCAACCTTATTGCACCATCATTTGTTTCATCACCCACCCCCCAGATTTTTATTTTATGCAACTGGAGGAAAAGGCTTCATGAATGATGTTATGCCATTTCAGGATCATGCAAACCATCGATGACGTCCTTCATCTGTCCCAGATATTTGGTCTCCAGACATGTGAACCTGGGCTACTTATGGTTGAATTATTCTTTTCAATTGTATGGCATTTGCTTGATGCATCATTGGATGATGAAGGATTGCTGGAACTTCCTGCAGAAGAAAGATCAGTGTGGCTAATCAGGCCACAACCACATGATATGGAACTAGATGTTCATGATTCTTTTGGTGAGAAGAAAACTGAGAACAGTGAAAATCTGCTTAAAGTGAACACTGCAAAAGCTATTGAGATTATTGGGCAGTTCCTGCAAAATAAGAAAACTGCAAGGATTTTGTGCTTGGCCCATCAAAATATGTAAGAAGTATAATTCTTCCTAACCTTGTTTGTCTTCTCTCTCCGTCATCTTTGATTTCTGAAGGAAAGAAAAGCGTATGGATTTTAAGAATGGCCACATTTCATTGAGACTACCACTAGTTATTGGAATAACGTATGCTGCTTTAATGTTAAATTAATACAAAATTTTTAGAGCTCAATGAAAATGATTAACATAATTCTGCTTTCTGGGTCTTAGGCCATTGCACTGGGCAGGTTTTGCCCAGCGGTTACAACTACTTGCAGCAAACTCAGTAGTTTTGAGGAACACAAAACTAATAACTCCAGAGGTCCTTCTGCACTGGACATCCGATAAACATAGGTTTTTATCACAAGAAGGAAAAACAACATCTCAGTTAGAGTTCCATGATGTAATGGCTTCTGGATCGCTCTTTTCTTCCGCTGGTCAATCTCATGGCGTTAATTGGTCTGCATTGTGGCTTCCCATTGATTTGTTCCTGGAGGATGCCATGGATGGATCACAAGTTCTGGCAACTAGTGCTGTTGAGCGTCTGATTTGTATGAGCTTACAATTTTTATAGTGCTTGAGTGACTCTTCAATTAAATTGAAATTCTAAGTTTCTATAAGAGTTCTATTGATCCAGAGTTATCTGCAGGCTTGATAAAATCTTTGCGGGCAGTTAATGATGCCTCCTGGCACAATACATTTTTGGGTTTGTGGATTGCAGCGTTGCGACTTATTCAAAGGGTAGGATCAATTAGCGTTTTGATAAATGAATCATGTTTATCTGTTTATATCCTCTTTATGTTCAGATATTAACTTTGTCCAAAATGATTTCATCCGCACAATTTACTTAATTAGCAGGTCCATTGCCTTGAATTGAGAGATTTAAAGTGATTTCTGTTCTATGATAATTGCATGGTAACTTTATGCTGGCTTATAAAGTTTATACTATGTTCTTCTTTCTCCTTTATATTTTAACTCCAAGATTGGGGGAGATGGATAAAAAAAGCAGCATTGAAGTTCAATCTTTTAATAAGCCTGACTCATGTGGCAGTTTTACTCTGTTTGTGACAATAATCTACTTAAAATACGGTCTCCTTCTGTTGAATTGGGGAAACGTACCTTGCAAGAAAATTAAGCATCCATCCCTCTTTTCACTTATACTCCTCTTTATTATTATTTGAGTATTTATTACCTTTAGGTAAAAAAAACTCAGGTTTAATCTGCCTACATCTGGGGGGCATTTAACTTATTCCAACCTGCTTATATTTGCTAATTCAAATTTCCATTTTAGGAAAGGGATCCAAGTGAGGGTCCTGTGCCTCGTTTGGATACATGCTTGTGCATGTTATTGTCAATTACAACCCTTGCAGTCACCATTATTATTGAAGAAGAGGAAGGTGAACTAAAGGAGGAGGATGAATGCAGCCCAAGTAAAAGTAGAGATGAGAAGCAGTCTTCAGGAAAGCGCCGACAAGGTTTGATTACGAGCTTGCAGATGTTGGGTGAATATGAGAGCTTGCTGACTCCTCCTCAATCCGTTATTGTAGTAGCCAATCAGGCTGCCGCAAAAGCAGTAATGTTCATATCAGGAGTTGCAGTTGGTAATGAGTACTATGACTGTGTTAGTATGAATGACACACCTATTAATTGTTGTAAGTACTTGTTCTTATTTCAGAATTTAACATTGGTTGTATGGATTCTAATGAGCAATGGTCTCTAGAATATTTAAATTGGTGAATATTTGCGTTCTTTTGGAACTTCTAAACATAGTCAATTGACCTGTTCTATCTCCATTCATCTGCAAATGCTAACCCTTAGATTCATCTGCAAATGATAACCTTTAGATTCATGCTCAATTTCTCAAGATTTCCTGGGAGTACAATTCTGTTAGAACAGTCAAATCTTTTATAAAAGGACATTATTGACTTCATGCTAAAAAATTGCTTGGTTCAGTGGTTGACATTTATTCATCAACAAGTGCAAAATTTTGGATTGACGTTCTTCAAGAATCATTATTACTGGAATTCTGCTTGAACAATTTATCTTCAATGAAGCACATTATTGAACGTATCCCCAAAATTATTTTATTCTGTGGACAAACTAATTCTAGATGTGGCATAGGATTCTGGCGTGCAAATCTACATAGTATAGTAGTCTTTGTTATCCTGTACATACATCTTAAATTTTAATTTACAATGGTTCTTTTGATCCTTGAAGATTTCTCTCTCACTCTCTCTCTCTCTCTCTCACACACACACACACACATTGTTGCATACATATGCACATCCGAAATGTATTCTCTTGTGTGGCTAATTTGTTGCTTTTTCTTGTTGCAGCTGGAAATATGCGGCATCTGATTGTTGAGGCTTGTATTTCTAGGAATCTTCTAGATACATCGGCATATTTTTGGCCAGGCTATGTAAATACACGCAGCAGTCAAGTGCCTCGTAGTGCATCTAGTCAGGTGGTTGGTTGGTCATCATTCATGAAAGGGTCGTCCCTAACTCCGTCAATGGTGAATGCTTTAGAGGCAACTCCAGCTTCTAGGTATGCTCCCACAAGTATCTTTTTGTATCATGTAATGCCATATTGAGGGAAGATGATTAATTAAAGGACCAAGTTCAGTACCTAGGTTCTGTATTTTGTTTCCCAAAAAAGTGAATACAGATGCAGCGACTATGTGTTGCAGACAGGGAAGCTGGAAATAGATTTGGATAGCTTCTTGAAGTTATGAAAATTAGGAAGGTGGGGAAAGCTGGGTATTCTAAGCAGGTTTAATAGAAGGGGTTGGAGAGAGGTGCTAAATTTTGTTCCCTATTATCCTTCTTTTTGTCAGTTAGGGGGCAAAATATAAGGGGTCACTGAGAGGAATGACAAGAGGGTGAAAATGGGTAATTCATGGTCCAATCAACGGTTGGGTAGACGAAATATTAGTGATTCAGGACGAAATATTAGTGATTCAGGAAGGTGGCTGACGGGGGGAAACTAGAGATGAGATGAACATAGTAAGTAAGATGGATTTATAAACGATTAGATTGATTTCTAACAAGGAGTTTTTTTCCCGGATGAGAAACAAGAGAATATCATTCAAGAGGCAAAAGCCAAAACAAAACAACTTAAGGGACAAGGGAATAAGGCATCCCCTCTTCCGAAGGAAAGAAGTTGATGGTTTCTATCGAGTAGTTACAAGACAACCTGTGTTGCGCACTCCAAGTAGAGGCCATAAACTGTACGAGGTCACAAAAAGAAAGAAGAGAGCTCGACTTATCTGTAAACACTCTAGAATTTCTCTCTTTCCAAAGAAGCCAAGGAATAGCCCTATCAAGATTCATCCAAAGCACTCCAGCTTTGTATTTCAGCCACCACTCAGAGAATTCCAACCAACCACAAAACTATACCACGCAGCTTACACCCCTGCAACCCAAACATTTGACCGAATAAATTCCACACTTTTCCAGCGAACTCACGGTGCATCAGCAGATGGGAAGAAGACTCCTCATTTTTACAGCACATAACACACATATTGGGGGAGATACACAGGTTGGGGTACCTCCGTTAAACTTTGTCTAGAGTATTTGAGGTCCGTAGTCCACAAAAAAAATGAACTTAGGAATCATCCGTTCCCAAAGGTGAGTACACTATGCTTCATCTAACACTCTTCTCTTTTCTTGAAGAGCAACCAAGGCCAAAGGAACTGTAAATATACCAGACTTATCCAGCTTCGAAAGCAAAGTATCATCCCTTTGAGTGGATTATCTAGTTTCCAATAGCAAGCCTAGCTCACCACCCCTCCAACTCTCTGTCAGAAACCACTTCTCAAACCAAGATCCCAATCGTTACTGTACACAGTATTGAGAGAATAAAGGACAACTATATACAATAACATATATCATAACCATCCCTCTCAAGCGGGAGCAAATATGTCGATCATGCTCAGCTTGTTGGAGTGATGATTTTCTTGAACCGTTTAAGGCTTTAGTGAGAATATCCCTCAGTTATTCTCCTGTCTTCACATATCAGGTGGACAGCAACCCTGGTTGTATTTTCTCACAAATAAAATGACATTCAATATGTTTAGTTCACTCATGTAACAATGGAATAGATGCAAATTGAAGTGCAGCTTGATTATCTCACCACAATTTTGCTGGTATTGTATACTAAAGCCTATCTCAGTTAACAATTGATATATCCACACTATTTCACATATAGTCTGTGCCACAACTCAATATTATGACTCAACACTTGATTATGAAACCACGTTCTGCTTCTTACTCTTCCACGACACTAAATTTCCTCCTACGAAGACAATATTATGACTCAAAGCTTGTGATTTTCTTGGGAGCTTATATCTTTGAGCATTAGTCTCTTTTCATCTCTTCAATAAAAGTTTGGTTCTTGTTAGGAAAGGAAAAAAAAAAAAAAAAAGAATACAAGGGAAGGAAGAAAAATTAAGGGAACAAATATGTGAACAAAATAAAAGAGAGAATAACTATGGAATATTTCCACAAGGGTCAATAATCAACAAAATTATTTGTTGAACAAAATCTTTGGGAAACGTACATGTTGTCACCGTAATACATTTATGGAGTTTTATCACATTCATAAGCGTACATCAGATGCGTTGCAATTTTACCCAGTAGTATGCCAATTAATTTTAACTTAAAGCTCATGGATTTGATGTAAGCTTAGCGGAGATTGAGAAGATCTATGAGATTGCCATAAATGGTTCAGGTGACGAGAAGATATCTGCAGCTTCCATTTTGTGTGGGGCATCACTTGTTCGAGGCTGGAATCTACAGGTGAATGACAGTTGATGCCTCTGATTTGTATGGCACTGTGTGAAGGTTTTTTCCCCAATATTTTTGTAAAAGATTAATTTTGCATCTGTTCTCCACTATTAACATCTGGGATTATTTTAACCCATTTTCTTCTAGGAACACACTGTTCTATTTATATCCAGATTATTGTCGCCACCAATTCCTGCAGATTACCCTGGAAGTGATAGCTATTTGATCGACTATGCCCCATTTCTGAATGTTCTACTGGTTGGAATATCATCAGTTGATTGCGTGCAGATTTTTTCCTTGCATGGCATGGTAAGAATGTTAACCTTGCTTATTTGACCCTGCTGATAAGCATCTGAATCTGAAGTTACCTTTTTATATAATAGATTCTGTGTGCAAGCTTGGTAGAGGTTTTATATATGAATTTACTCTTCATTTATAGCCATTATAAATTAAGTATGAGAGCTGATTTGTTTCGGAGAAGTTTTGAAAGGGTTTGATGCCTGGCTTTTGATAGGTGGGACGGAGGCCTATTGACTAAGAGAAAATTCCTTATAAGCCCATTCAAATAATCATTAGATTCAATTTTTGTTTAATAATCTATATCCTTCGGCCGACCTGAAAATAGTTCAAATGACATGAAGTATATACTTTTTGACTAGGAGACTAGAGGTTTGAATCCCACCCTATTGTTGAACTCAAAAAANCCTGCTTCAATGATTCTGAACATACTTGATTTTTGACATGGAAAAGAATTCGGTTTGAACAGAGTAATTGAGACCTTATTTTCATTGTACTATGAGCTTATTTTTCCCCCCTTTTTTTTGCTGTTTGATGCCAGGTTCCTCTACTTGCAGGTCAATTAATGCCAATCTGCGAAGCTTTTGGATCAAGTACCCCCAAGTCATGGATCCTTACATCTGGGGAAGAACTTACTTGTCATGCAGTGTTCTCCTTGGCTTTTACACTTCTATTGAGGTTGTGGCGGTTTCATCACCCACCTATTGAAAATGTGAAGGGAGATGCACGGCCTGTGGGATCTCAGCTAACTCCTGAATATCTGCTATTGGTTCGAAATTCTCAGTTAGCATCTTTTGGAAAGTCACCCAAGGATCGACTTAAAGTCAGACGGCTGTCAAAATTGTTGAAATTTTCTTTAGAACCTACATTCATGGATTCCTTTCCAAAATTGAAAGGGTGGTACCGGCAACATCAAGAATGCATTGCTTCCATTCCCCCTGGTCTTGTACCTGGGGCCCCTGTTCATCAAACTGTTGATGCTCTCTTGACCATGATGTTCAAGAAGATAAATCGTGGTGGTCAGTCTTTGACTTCAACTACTTCAGCAAGCAGCAACTCATCTGGATCTGCAAATGAAGAGGCCTCCATTAAGCTTAAAGTGCCTGCATGGGACATCCTTGAAGCAACTCCCTTCGTTCTCGATGCTGCTCTTACTGCCTGTGCTCATGGACGATTGTCTCCCCGTGATTTGGCTACAGGCAAGTCTGAAACACTGTTTTAATGAGAAACAAGAAAGGTTAATCTATTACTTAGAATATAAAATTCTGCATGTGGTTTATTTTTTTGAGAACTTATGAATTCTTTTTGGACTAATACCATTCTTGATGTTTAAATATAGAACTTACCTTCATTTATTGTGATTTGTCATTAAATTAAATGTTTAAATATTACATGTCTAAGTAGATTATTAATAACAAAAAATGAAAAATGTTAGGAACCTGCTCTCTCTCTCTCTCTCTCCCTTCTGTTAGAATATTACAAAGAACCCTTTCACTTAATTGGATTATTAATACCTTCAATTCCCGTTGCTCTCTTCCCCTCCTTCCCCACCCTTGCTTCATGCAAATCTACCTTATTAATACAAAAAGTCTCTCTTATTATTTGTGGATTATAAATCTAATTTGCTTCCCCTTTTGTTTTGCAATATTAATAGAGGTTTGGTCTAACGTAGAAATAGGTAGCTCATCTAAAGGAGGAGCTAAGACCTTGGTTACAGTGGGGATAAGTGATGTGATACAATTAGACTCAACTTCCAGTAGCTCAATTTCCCTCCCATTCTCCCCCAAATTTGGGACTTGATGAAAATGGACTAATTTTAAAAAAAGTAAACATCGATAGATGTTTACATTTTTCTAGTGGGTGGGGAGTAACATTTTTATTCTTTTTGGTGTGATGTAACCCGGAAAAATGCACCTGATGAATTTTGGATCAAGTTTGGGCTGATGAGGAGGATTGTGAACTGAAGAAAAATACACAAATTCTCGAAGAGGTAGTTTTAAGGAAAATTTTTGGAGTTGGGGATGGATTTGGAGGAAGACATTTCTAGGAGATTGGAATTTGAGTACTCGTCATGACATTCGATATAAAGGAAGGTTGCAGCGAGAATGAATTCTCCCCAAAAATGATTGGAACATTACTGGGAAGTATAAGAGAACGAGTTAATCAAGAAGTTGTCCTTTTTTTTTTCCCCAGTAATTCCATTTTGTTAAGGAATGCCCACCCATGAACAATATAAACAATACCATGAGATGAAAATGAGCCAAGAGTTGAATTGACATCGTCTCGAGCATTGTCTCTTCTAAGAACTTTGTGAATTTGTGTACTGCGGGCTTCTTGATGAATCCATATTTGTACCCTTGTGACGGCTTATAGAAAATATATTTCTTCTCAGGATCAATATAGGAACAATCTGTTGTTGGTTTGCTTGGTAAGTTCTTTACCTCATTGTTTCAGGACTCAAAGACCTTGCTGATTTTCTACCGGCATCCTTTGCTACTATTGTGTGCTACTTTTCAGCTGAAGTTACACGTGGTATATGGAAGCCAGCATTCATGAACGGAACTGATTGGCCTAGTCCTGCTGCAACTTTGTCCGTTGTTGAGCAACAGATTAAAAAGATTCTTGCTGCAACTGGTGTTGATGTCCCTAGTCTTGCTCTAGGTAAATTCTTGATGCGCACTAATGCCGTTTTATATATATATATATATATATATATATATTTTATTAGAACATCTGGAAACTATTTTCCTACTTTTATCAATTTCATTGAGTTAGTATTTGGTTTCTATACTTCTTTTTTAGAAATTAAAACGAAGGTCAAGATAAGAAAGCCCTCCCAACCATTAGAATGGAGATTGAAGAAATGCTCTCCAATTGATTTGAATAAAGGAGGATGGTGATAAAACTTTCATAAAGAAAATAAATGTTACGAAGAGCACCTCTATATTCTCTCTACCTGGTTAGGTAGGTGCATTTTTCATCTTCCCCACCCCATATATTCTCTCTACTTGGTTAGGTAGGTGCCAAAGCACAGCCTGCTGTTGGTCCGCAAAATCTGCCTTCTACACTTTATGAGTTAGCCGAACAACAATCAGAAAAAAAAGTTTATCGTCCTGGTGGGGAAAAGATATTTAGTAAGCCAAATATCTCCATTATCAACTCTCTAGAAAACTCAAGAGTCTCAGCCGAAGTAATAGAAGCAATTTCCTAAGCGTCTAGGATATATTCTTCATACAAATATATTAATCTGAATACGTCTCACGGAAGACGATAGAAATGGTAAGAATGATAGCGACTTCATATCAAAGAATTTTTCAAGACAAGTCATTAGAGTAACGTCGACGCTTTTTGTACAAATATTCAGTTTTTATCTTCTTAGTGGTGCCATAGCAACAACAGTTTACTTCCTAACTGCCTCGTATCTTTGATTCTTCTTGATAGGAAAGCTTTTTGTAAATAGTCTTTTGGATTGGTGGGTGGGGGAGGGGGGATCTCCTGCCCTTAGATTGTTGCTGTTTTTTGGTCTTTGCAACATATTCACAGGTTTCTTATCAAGAGGAAAAAAAAGAAAGAAAAGAATGACAGTGACTTTGCACTGTTTGAAATGTGATGAAGCTGCAACACATTCACTTGATCTCTCACCAGAGTAACTCTTGAAAAACATAAAAAATTGAATTGGTATTGCATTTTTCATGTGTTTTCTGTTCAACCTAAAATTGAGCTTGAATTGCCTATTTGCAGGAGGAAGTTTTCCAGCTATGCTTCCTTTACCCTTGGCTGCCCTAATAAGCCTCACAATAACCTATAAACTGGATAAAGCCTCTGAACGCCTTCTTGCCCTCGTTGGCCCCGCGCTAAATTCGCTCGTTGCTGGTTGTTCGTGGCCTTGCACACCTATTATAGCCTCATTGTGGGCTCAGAAAGTGAAGCGATGGAATGACTTCCTTGTGTTCTCTGCTTCTCGCACTGTTTTTCACCATAATAGTGATGCTGTTGTCCAGCTGCTTAAGAGTTGTTTCACTTCGACTCTGGGTTTAGGCAACTCCAACGTAAACAGCGGTGGAGGTGTAGGCGCACTCCTCGGTCACGGTTTCGGTTCTCACGTTTTAGGAGGGATGTCTCCAGTGGCTCCTGGGATTCTCTATCTCCGTGTGCATCGATGTGTTAGAGATGCTTTGTTCTTGGTGGAGGAGATTGTCTCTCTTTTAATGCTCTCTGTCAAAGACATTGCAGTTACTGGGCTACCAAAGGAGAAGGCTGAAAAACTAAAGAAGTCCAAGCATGGAATGAGATGTGAACAGGTTTCTTTTGCTTCTGCAATGGCACGCGTTAAACTTGCAGCTTCTCTTGGAGCTTCATTAGTTTGGATATCCGGTGGATCAGGCTTGGTCCAATCTTTGTATAAAGAAACCTTGCCGTCTTGGTTTTTATCAGTCCATTCAGTAGACCGTGAAGGTGTAGAATATGGAGGTATGGTTCCTGTGCTTAGGGGCTATGCACTTGCATTCTTTTCAGTACTTTGTGGGACGTTCTCCTGGGGCATAGACTCGATATCATCAGCGTCGAAGAGGCGTGCAAAGCTTCTCGACGCCCACCTCGAATTTCTTGCGAGCGCATTGGATGGAAAATTCTCCATTGGGTGTGATTGGGCTACATGGCGGGCTTATGTTTCTGGGTTCGTGAGCTTGCTGGTGCGTTGTGCACCGAAGTGGTTGCTCGAGGTGGATTTGAAGGTGTTGGAGAGGTTGGGCAAAGGATTAAGGCAGTTGAACGAGGAGGAATTGGCTCTTGCATTGCTGGAAAGTGGTGGGTTGACTGCAATGGGTGCAGCAGCGGAACTTATTATTGAAGGAGGATTTTAAATGTTACAGACTTAACATGAAAAGTGAACCATTTTTGTTTAGAAAAACTGGAACCATCAACTGACGTAGGTTTCCCTTAGCATCATATCCCCAGTAATGCAACGTTCATGTACACAAATGGTTCTTACCGCTGCTCTGCATAGGCATATTAGCCGCCGTTTTTTTTTTGGCTAAAAATCTGAAGTAATGATATTCAAAATTTTAGCATGTAATTCATGTATCATTAAATTTGTGAAAAATATGTAACAATTTAGGCCACATCCTATTAAATTTGTATATTTTAGTTTAACAGTTTTGACCTCGAATAGATCAAGAATGTAAGTTCAAAAAAACTTAATAGCAATTAGATTTAATCATATAAAATAGAAAGTTTGACCATTGAATTGTACACGAGGTTGATTGAATTGTACACGAGGTTGAGGTGTTGTGATGTCCCATATTGGTTGGGGAGGAGATACGAGGTTGAGGTGTTGTGATGTCCCATATTGGTTGGAGAGGAGATACGAGGTTGAG

mRNA sequence

TGAACCAGGGTTCAAATCTAATTTGATTTCTTCAATTACTTAAACCAGGGTTTTCTTCTTCCATCATTTTACGCGCCGCGAACAATTTCATGTACCTCTAAATTTTGGACATACACGAGAATGAACCCCAAATGTTTTCTCAAATAACTTCAATCTACTCACCCTGAATCTCTTTTCCATCCATTATTCCCTTTCCCTGAGCAAGAAATTCTGTGGGTCAGATTCTCCCATGGCGGTTTCCGCTCAACCGCCCGGTCAACTGCAGGGGATCGCTGGTGTTTGGGACACTGTGTTGGAGCTTACCAAGTCGGCGCAGGAGAAGAACAGCGATCCACTGCTTTGGGCGGTTCAGCTCAGCTCCAGCCTCAATTCGGCTAGTGTTTCCTTGCCGTCTGTCGAGCTCGCCCACCTCTTGGTCTCTCATATTTGTTGGGACAATCACGTTCCGATCATGTGGAAATTCCTTGAGAAGGCAATGACCGCCAGAATCGTTCCTCCCCTGCTGGTTATTGCTCTTCTTTCTACCAGGGCAATTCCATACAGAAAGCTTCGACCTGCAGCATACAGGCTTTACCTGGAACTTCTAAGCAGACACGTCTTTTCATCAACATTGGAAGTCAATGGACCCAATTACCCAAGGATCATGCAAACCATCGATGACGTCCTTCATCTGTCCCAGATATTTGGTCTCCAGACATGTGAACCTGGGCTACTTATGGTTGAATTATTCTTTTCAATTGTATGGCATTTGCTTGATGCATCATTGGATGATGAAGGATTGCTGGAACTTCCTGCAGAAGAAAGATCAGTGTGGCTAATCAGGCCACAACCACATGATATGGAACTAGATGTTCATGATTCTTTTGGTGAGAAGAAAACTGAGAACAGTGAAAATCTGCTTAAAGTGAACACTGCAAAAGCTATTGAGATTATTGGGCAGTTCCTGCAAAATAAGAAAACTGCAAGGATTTTGTGCTTGGCCCATCAAAATATGCCATTGCACTGGGCAGGTTTTGCCCAGCGGTTACAACTACTTGCAGCAAACTCAGTAGTTTTGAGGAACACAAAACTAATAACTCCAGAGGTCCTTCTGCACTGGACATCCGATAAACATAGGTTTTTATCACAAGAAGGAAAAACAACATCTCAGTTAGAGTTCCATGATGTAATGGCTTCTGGATCGCTCTTTTCTTCCGCTGGTCAATCTCATGGCGTTAATTGGTCTGCATTGTGGCTTCCCATTGATTTGTTCCTGGAGGATGCCATGGATGGATCACAAGTTCTGGCAACTAGTGCTGTTGAGCGTCTGATTTGCTTGATAAAATCTTTGCGGGCAGTTAATGATGCCTCCTGGCACAATACATTTTTGGGTTTGTGGATTGCAGCGTTGCGACTTATTCAAAGGGAAAGGGATCCAAGTGAGGGTCCTGTGCCTCGTTTGGATACATGCTTGTGCATGTTATTGTCAATTACAACCCTTGCAGTCACCATTATTATTGAAGAAGAGGAAGGTGAACTAAAGGAGGAGGATGAATGCAGCCCAAGTAAAAGTAGAGATGAGAAGCAGTCTTCAGGAAAGCGCCGACAAGGTTTGATTACGAGCTTGCAGATGTTGGGTGAATATGAGAGCTTGCTGACTCCTCCTCAATCCGTTATTGTAGTAGCCAATCAGGCTGCCGCAAAAGCAGTAATGTTCATATCAGGAGTTGCAGTTGGTAATGAGTACTATGACTGTGTTAGTATGAATGACACACCTATTAATTGTTGCTATGTAAATACACGCAGCAGTCAAGTGCCTCGTAGTGCATCTAGTCAGGTGGTTGGTTGGTCATCATTCATGAAAGGGTCGTCCCTAACTCCGTCAATGGTGAATGCTTTAGAGGCAACTCCAGCTTCTAGCTTAGCGGAGATTGAGAAGATCTATGAGATTGCCATAAATGGTTCAGGTGACGAGAAGATATCTGCAGCTTCCATTTTGTGTGGGGCATCACTTGTTCGAGGCTGGAATCTACAGGAACACACTGTTCTATTTATATCCAGATTATTGTCGCCACCAATTCCTGCAGATTACCCTGGAAGTGATAGCTATTTGATCGACTATGCCCCATTTCTGAATGTTCTACTGGTTGGAATATCATCAGTTGATTGCGTGCAGATTTTTTCCTTGCATGGCATGGTTCCTCTACTTGCAGGTCAATTAATGCCAATCTGCGAAGCTTTTGGATCAAGTACCCCCAAGTCATGGATCCTTACATCTGGGGAAGAACTTACTTGTCATGCAGTGTTCTCCTTGGCTTTTACACTTCTATTGAGGTTGTGGCGGTTTCATCACCCACCTATTGAAAATGTGAAGGGAGATGCACGGCCTGTGGGATCTCAGCTAACTCCTGAATATCTGCTATTGGTTCGAAATTCTCAGTTAGCATCTTTTGGAAAGTCACCCAAGGATCGACTTAAAGTCAGACGGCTGTCAAAATTGTTGAAATTTTCTTTAGAACCTACATTCATGGATTCCTTTCCAAAATTGAAAGGGTGGTACCGGCAACATCAAGAATGCATTGCTTCCATTCCCCCTGGTCTTGTACCTGGGGCCCCTGTTCATCAAACTGTTGATGCTCTCTTGACCATGATGTTCAAGAAGATAAATCGTGGTGGTCAGTCTTTGACTTCAACTACTTCAGCAAGCAGCAACTCATCTGGATCTGCAAATGAAGAGGCCTCCATTAAGCTTAAAGTGCCTGCATGGGACATCCTTGAAGCAACTCCCTTCGTTCTCGATGCTGCTCTTACTGCCTGTGCTCATGGACGATTGTCTCCCCGACTCAAAGACCTTGCTGATTTTCTACCGGCATCCTTTGCTACTATTGTGTGCTACTTTTCAGCTGAAGTTACACGTGGTATATGGAAGCCAGCATTCATGAACGGAACTGATTGGCCTAGTCCTGCTGCAACTTTGTCCGTTGTTGAGCAACAGATTAAAAAGATTCTTGCTGCAACTGGTGTTGATGTCCCTAGTCTTGCTCTAGGAGGAAGTTTTCCAGCTATGCTTCCTTTACCCTTGGCTGCCCTAATAAGCCTCACAATAACCTATAAACTGGATAAAGCCTCTGAACGCCTTCTTGCCCTCGTTGGCCCCGCGCTAAATTCGCTCGTTGCTGGTTGTTCGTGGCCTTGCACACCTATTATAGCCTCATTGTGGGCTCAGAAAGTGAAGCGATGGAATGACTTCCTTGTGTTCTCTGCTTCTCGCACTGTTTTTCACCATAATAGTGATGCTGTTGTCCAGCTGCTTAAGAGTTGTTTCACTTCGACTCTGGGTTTAGGCAACTCCAACGTAAACAGCGGTGGAGGTGTAGGCGCACTCCTCGGTCACGGTTTCGGTTCTCACGTTTTAGGAGGGATGTCTCCAGTGGCTCCTGGGATTCTCTATCTCCGTGTGCATCGATGTGTTAGAGATGCTTTGTTCTTGGTGGAGGAGATTGTCTCTCTTTTAATGCTCTCTGTCAAAGACATTGCAGTTACTGGGCTACCAAAGGAGAAGGCTGAAAAACTAAAGAAGTCCAAGCATGGAATGAGATGTGAACAGGTTTCTTTTGCTTCTGCAATGGCACGCGTTAAACTTGCAGCTTCTCTTGGAGCTTCATTAGTTTGGATATCCGGTGGATCAGGCTTGGTCCAATCTTTGTATAAAGAAACCTTGCCGTCTTGGTTTTTATCAGTCCATTCAGTAGACCGTGAAGGTGTAGAATATGGAGGTATGGTTCCTGTGCTTAGGGGCTATGCACTTGCATTCTTTTCAGTACTTTGTGGGACGTTCTCCTGGGGCATAGACTCGATATCATCAGCGTCGAAGAGGCGTGCAAAGCTTCTCGACGCCCACCTCGAATTTCTTGCGAGCGCATTGGATGGAAAATTCTCCATTGGGTGTGATTGGGCTACATGGCGGGCTTATGTTTCTGGGTTCGTGAGCTTGCTGGTGCGTTGTGCACCGAAGTGGTTGCTCGAGGTGGATTTGAAGGTGTTGGAGAGGTTGGGCAAAGGATTAAGGCAGTTGAACGAGGAGGAATTGGCTCTTGCATTGCTGGAAAGTGGTGGGTTGACTGCAATGGGTGCAGCAGCGGAACTTATTATTGAAGGAGGATTTTAAATGTTACAGACTTAACATGAAAAGTGAACCATTTTTGTTTAGAAAAACTGGAACCATCAACTGACGTAGGTTTCCCTTAGCATCATATCCCCAGTAATGCAACGTTCATGTACACAAATGGTTCTTACCGCTGCTCTGCATAGGCATATTAGCCGCCGTTTTTTTTTTGGCTAAAAATCTGAAGTAATGATATTCAAAATTTTAGCATGTAATTCATGTATCATTAAATTTGTGAAAAATATGTAACAATTTAGGCCACATCCTATTAAATTTGTATATTTTAGTTTAACAGTTTTGACCTCGAATAGATCAAGAATGTAAGTTCAAAAAAACTTAATAGCAATTAGATTTAATCATATAAAATAGAAAGTTTGACCATTGAATTGTACACGAGGTTGAGGTGTTGTGATGTCCCATATTGGTTGGAGAGGAGATACGAGGTTGAG

Coding sequence (CDS)

ATGGCGGTTTCCGCTCAACCGCCCGGTCAACTGCAGGGGATCGCTGGTGTTTGGGACACTGTGTTGGAGCTTACCAAGTCGGCGCAGGAGAAGAACAGCGATCCACTGCTTTGGGCGGTTCAGCTCAGCTCCAGCCTCAATTCGGCTAGTGTTTCCTTGCCGTCTGTCGAGCTCGCCCACCTCTTGGTCTCTCATATTTGTTGGGACAATCACGTTCCGATCATGTGGAAATTCCTTGAGAAGGCAATGACCGCCAGAATCGTTCCTCCCCTGCTGGTTATTGCTCTTCTTTCTACCAGGGCAATTCCATACAGAAAGCTTCGACCTGCAGCATACAGGCTTTACCTGGAACTTCTAAGCAGACACGTCTTTTCATCAACATTGGAAGTCAATGGACCCAATTACCCAAGGATCATGCAAACCATCGATGACGTCCTTCATCTGTCCCAGATATTTGGTCTCCAGACATGTGAACCTGGGCTACTTATGGTTGAATTATTCTTTTCAATTGTATGGCATTTGCTTGATGCATCATTGGATGATGAAGGATTGCTGGAACTTCCTGCAGAAGAAAGATCAGTGTGGCTAATCAGGCCACAACCACATGATATGGAACTAGATGTTCATGATTCTTTTGGTGAGAAGAAAACTGAGAACAGTGAAAATCTGCTTAAAGTGAACACTGCAAAAGCTATTGAGATTATTGGGCAGTTCCTGCAAAATAAGAAAACTGCAAGGATTTTGTGCTTGGCCCATCAAAATATGCCATTGCACTGGGCAGGTTTTGCCCAGCGGTTACAACTACTTGCAGCAAACTCAGTAGTTTTGAGGAACACAAAACTAATAACTCCAGAGGTCCTTCTGCACTGGACATCCGATAAACATAGGTTTTTATCACAAGAAGGAAAAACAACATCTCAGTTAGAGTTCCATGATGTAATGGCTTCTGGATCGCTCTTTTCTTCCGCTGGTCAATCTCATGGCGTTAATTGGTCTGCATTGTGGCTTCCCATTGATTTGTTCCTGGAGGATGCCATGGATGGATCACAAGTTCTGGCAACTAGTGCTGTTGAGCGTCTGATTTGCTTGATAAAATCTTTGCGGGCAGTTAATGATGCCTCCTGGCACAATACATTTTTGGGTTTGTGGATTGCAGCGTTGCGACTTATTCAAAGGGAAAGGGATCCAAGTGAGGGTCCTGTGCCTCGTTTGGATACATGCTTGTGCATGTTATTGTCAATTACAACCCTTGCAGTCACCATTATTATTGAAGAAGAGGAAGGTGAACTAAAGGAGGAGGATGAATGCAGCCCAAGTAAAAGTAGAGATGAGAAGCAGTCTTCAGGAAAGCGCCGACAAGGTTTGATTACGAGCTTGCAGATGTTGGGTGAATATGAGAGCTTGCTGACTCCTCCTCAATCCGTTATTGTAGTAGCCAATCAGGCTGCCGCAAAAGCAGTAATGTTCATATCAGGAGTTGCAGTTGGTAATGAGTACTATGACTGTGTTAGTATGAATGACACACCTATTAATTGTTGCTATGTAAATACACGCAGCAGTCAAGTGCCTCGTAGTGCATCTAGTCAGGTGGTTGGTTGGTCATCATTCATGAAAGGGTCGTCCCTAACTCCGTCAATGGTGAATGCTTTAGAGGCAACTCCAGCTTCTAGCTTAGCGGAGATTGAGAAGATCTATGAGATTGCCATAAATGGTTCAGGTGACGAGAAGATATCTGCAGCTTCCATTTTGTGTGGGGCATCACTTGTTCGAGGCTGGAATCTACAGGAACACACTGTTCTATTTATATCCAGATTATTGTCGCCACCAATTCCTGCAGATTACCCTGGAAGTGATAGCTATTTGATCGACTATGCCCCATTTCTGAATGTTCTACTGGTTGGAATATCATCAGTTGATTGCGTGCAGATTTTTTCCTTGCATGGCATGGTTCCTCTACTTGCAGGTCAATTAATGCCAATCTGCGAAGCTTTTGGATCAAGTACCCCCAAGTCATGGATCCTTACATCTGGGGAAGAACTTACTTGTCATGCAGTGTTCTCCTTGGCTTTTACACTTCTATTGAGGTTGTGGCGGTTTCATCACCCACCTATTGAAAATGTGAAGGGAGATGCACGGCCTGTGGGATCTCAGCTAACTCCTGAATATCTGCTATTGGTTCGAAATTCTCAGTTAGCATCTTTTGGAAAGTCACCCAAGGATCGACTTAAAGTCAGACGGCTGTCAAAATTGTTGAAATTTTCTTTAGAACCTACATTCATGGATTCCTTTCCAAAATTGAAAGGGTGGTACCGGCAACATCAAGAATGCATTGCTTCCATTCCCCCTGGTCTTGTACCTGGGGCCCCTGTTCATCAAACTGTTGATGCTCTCTTGACCATGATGTTCAAGAAGATAAATCGTGGTGGTCAGTCTTTGACTTCAACTACTTCAGCAAGCAGCAACTCATCTGGATCTGCAAATGAAGAGGCCTCCATTAAGCTTAAAGTGCCTGCATGGGACATCCTTGAAGCAACTCCCTTCGTTCTCGATGCTGCTCTTACTGCCTGTGCTCATGGACGATTGTCTCCCCGACTCAAAGACCTTGCTGATTTTCTACCGGCATCCTTTGCTACTATTGTGTGCTACTTTTCAGCTGAAGTTACACGTGGTATATGGAAGCCAGCATTCATGAACGGAACTGATTGGCCTAGTCCTGCTGCAACTTTGTCCGTTGTTGAGCAACAGATTAAAAAGATTCTTGCTGCAACTGGTGTTGATGTCCCTAGTCTTGCTCTAGGAGGAAGTTTTCCAGCTATGCTTCCTTTACCCTTGGCTGCCCTAATAAGCCTCACAATAACCTATAAACTGGATAAAGCCTCTGAACGCCTTCTTGCCCTCGTTGGCCCCGCGCTAAATTCGCTCGTTGCTGGTTGTTCGTGGCCTTGCACACCTATTATAGCCTCATTGTGGGCTCAGAAAGTGAAGCGATGGAATGACTTCCTTGTGTTCTCTGCTTCTCGCACTGTTTTTCACCATAATAGTGATGCTGTTGTCCAGCTGCTTAAGAGTTGTTTCACTTCGACTCTGGGTTTAGGCAACTCCAACGTAAACAGCGGTGGAGGTGTAGGCGCACTCCTCGGTCACGGTTTCGGTTCTCACGTTTTAGGAGGGATGTCTCCAGTGGCTCCTGGGATTCTCTATCTCCGTGTGCATCGATGTGTTAGAGATGCTTTGTTCTTGGTGGAGGAGATTGTCTCTCTTTTAATGCTCTCTGTCAAAGACATTGCAGTTACTGGGCTACCAAAGGAGAAGGCTGAAAAACTAAAGAAGTCCAAGCATGGAATGAGATGTGAACAGGTTTCTTTTGCTTCTGCAATGGCACGCGTTAAACTTGCAGCTTCTCTTGGAGCTTCATTAGTTTGGATATCCGGTGGATCAGGCTTGGTCCAATCTTTGTATAAAGAAACCTTGCCGTCTTGGTTTTTATCAGTCCATTCAGTAGACCGTGAAGGTGTAGAATATGGAGGTATGGTTCCTGTGCTTAGGGGCTATGCACTTGCATTCTTTTCAGTACTTTGTGGGACGTTCTCCTGGGGCATAGACTCGATATCATCAGCGTCGAAGAGGCGTGCAAAGCTTCTCGACGCCCACCTCGAATTTCTTGCGAGCGCATTGGATGGAAAATTCTCCATTGGGTGTGATTGGGCTACATGGCGGGCTTATGTTTCTGGGTTCGTGAGCTTGCTGGTGCGTTGTGCACCGAAGTGGTTGCTCGAGGTGGATTTGAAGGTGTTGGAGAGGTTGGGCAAAGGATTAAGGCAGTTGAACGAGGAGGAATTGGCTCTTGCATTGCTGGAAAGTGGTGGGTTGACTGCAATGGGTGCAGCAGCGGAACTTATTATTGAAGGAGGATTTTAA

Protein sequence

MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAHLLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLDDEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQEGKTTSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVANQAAAKAVMFISGVAVGNEYYDCVSMNDTPINCCYVNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALEATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSTPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRLKDLADFLPASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPSLALGGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHGFGSHVLGGMSPVAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLKKSKHGMRCEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDREGVEYGGMVPVLRGYALAFFSVLCGTFSWGIDSISSASKRRAKLLDAHLEFLASALDGKFSIGCDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLERLGKGLRQLNEEELALALLESGGLTAMGAAAELIIEGGF
Homology
[Close]
BLAST of Cp4.1LG15g00030 vs. Swiss-Prot
Match: MD33B_ARATH (Mediator of RNA polymerase II transcription subunit 33B OS=Arabidopsis thaliana GN=MED33B PE=1 SV=1)

HSP 1 Score: 1429.8 bits (3700), Expect = 0.0e+00
Identity = 782/1320 (59.24%), Postives = 935/1320 (70.83%), Query Frame = 1 

Query: 17   VWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAHLLVSHICWDNHVPIMW 76
            +W++V  L +SAQEKN DPL WA+QL  +L SA +SLPS +LA  LV+HI W+NH P+ W
Sbjct: 10   LWESVTSLIRSAQEKNVDPLHWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSPLSW 69

Query: 77   KFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTLEVNGPNYP 136
            K LEKA++  IVPPLLV+ALLS R IP RKL PAAYRLY+ELL RH FS    +  P Y 
Sbjct: 70   KLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFMPLIRAPGYH 129

Query: 137  RIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLDDEGLLELPAEERSVWL 196
            + M +IDD+LHLS+ FG+Q  EPG +++   FSIVW LLDASLD+EGLLEL + +RS W 
Sbjct: 130  KTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASLDEEGLLELTSNKRSKW- 189

Query: 197  IRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCLAHQNMP 256
                PHDM+LD             EN +K N               +    L  A+  M 
Sbjct: 190  -PSSPHDMDLD-----------GLENSVKRN---------------ENHDALEKANTEMA 249

Query: 257  LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQEGKTTSQLEFHDVMAS 316
            +      + +Q    N V  R         +LH  S      + E KT  + EFH +++S
Sbjct: 250  I------ELIQEFLQNKVTSR---------ILHLASQ-----NMESKTIPRGEFHAIVSS 309

Query: 317  GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDASWH 376
            GS  +    S      ALWLPIDLF ED MDG+Q  A SAVE L  L+K+L+A N  SWH
Sbjct: 310  GSKLALTSDS------ALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKALQAANSTSWH 369

Query: 377  NTFLGLWIAALRLIQRE-------------------RDPSEGPVPRLDTCLCMLLSITTL 436
            + FL LW+AALRL+QRE                   RDP EGPVPR DT LC+LLS+T L
Sbjct: 370  DAFLALWLAALRLVQRENLCLRYCFFMHMLEILSEERDPIEGPVPRTDTFLCVLLSVTPL 429

Query: 437  AVTIIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIV 496
            AV  IIEEEE +  ++   SPS    EK+  GK RQGLI SLQ LG+YESLLTPP+SV  
Sbjct: 430  AVANIIEEEESQWIDQTSSSPSNQWKEKK--GKCRQGLINSLQQLGDYESLLTPPRSVQS 489

Query: 497  VANQAAAKAVMFISGVAVGNEYYDCVSMNDTPINCCYVNTRSSQVPRSASSQVV------ 556
            VANQAAAKA+MFISG+   N  Y+  SM+++   CC V      +       V       
Sbjct: 490  VANQAAAKAIMFISGITNSNGSYENTSMSESASGCCKVRFSLFTLKMFVVMGVYLLCNIS 549

Query: 557  GWSSFMKGSSLTPSMVNALEATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVRG 616
             WS  MKGS LTPS+ N+L  TPASSLAEIEK+YE+A  GS DEKI+ ASILCGASL RG
Sbjct: 550  CWSLVMKGSPLTPSLTNSLITTPASSLAEIEKMYEVATTGSEDEKIAVASILCGASLFRG 609

Query: 617  WNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVP 676
            W++QEH ++FI  LLSPP PAD  GS S+LI+ APFLNVLLVGIS +DCV IFSLHG+VP
Sbjct: 610  WSIQEHVIIFIVTLLSPPAPADLSGSYSHLINSAPFLNVLLVGISPIDCVHIFSLHGVVP 669

Query: 677  LLAGQLMPICEAFGSSTPK-SWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKGD 736
            LLAG LMPICEAFGS  P  +W L +GE ++ HAVFS AFTLLLRLWRF HPP++ V GD
Sbjct: 670  LLAGALMPICEAFGSGVPNITWTLPTGELISSHAVFSTAFTLLLRLWRFDHPPLDYVLGD 729

Query: 737  ARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSFPKLKGWY 796
              PVG Q +PEYLLLVRN +L  FGKSPKDR+  RR SK++  S++P FMDSFP+LK WY
Sbjct: 730  VPPVGPQPSPEYLLLVRNCRLECFGKSPKDRMARRRFSKVIDISVDPIFMDSFPRLKQWY 789

Query: 797  RQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSANEEA 856
            RQHQEC+ASI   L  G+PVH  VD+LL+MMFKK N+GG    + +S SS+ S S  +++
Sbjct: 790  RQHQECMASILSELKTGSPVHHIVDSLLSMMFKKANKGGSQSLTPSSGSSSLSTSGGDDS 849

Query: 857  SIKLKVPAWDILEATPFVLDAALTACAHGRLSPR-----LKDLADFLPASFATIVCYFSA 916
            S +LK+PAWDILEA PFVLDAALTACAHG LSPR     LK LADFLPA+  T+V YFS+
Sbjct: 850  SDQLKLPAWDILEAAPFVLDAALTACAHGSLSPRELATGLKILADFLPATLGTMVSYFSS 909

Query: 917  EVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPSLALGGSFPAMLPLPLA 976
            EVTRG+WKP  MNGTDWPSPAA L+ VEQQI+KILAATGVDVP L   G   A LPLPLA
Sbjct: 910  EVTRGLWKPVSMNGTDWPSPAANLASVEQQIEKILAATGVDVPRLPADGISAATLPLPLA 969

Query: 977  ALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASLWAQKVKRWNDFLVFSA 1036
            AL+SLTITYKLDKA+ER L LVGPAL+SL A C WPC PI+ SLW QKVKRW+DFL+FSA
Sbjct: 970  ALVSLTITYKLDKATERFLVLVGPALDSLAAACPWPCMPIVTSLWTQKVKRWSDFLIFSA 1029

Query: 1037 SRTVFHHNSDAVVQLLKSCFTSTLGL-GNSNVNSGGGVGALLGHGFGSHVLGGMSPVAPG 1096
            SRTVFHHN DAV+QLL+SCFT TLGL   S + S GGVGALLGHGFGS   GG+S  APG
Sbjct: 1030 SRTVFHHNRDAVIQLLRSCFTCTLGLTPTSQLCSYGGVGALLGHGFGSRYSGGISTAAPG 1089

Query: 1097 ILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLKKSKHGMR--CEQVSF 1156
            ILY++VHR +RD +FL EEI+SLLM SVK IA   LP  +AEKLKK+K G R    QVS 
Sbjct: 1090 ILYIKVHRSIRDVMFLTEEILSLLMFSVKSIATRELPAGQAEKLKKTKDGSRYGIGQVSL 1149

Query: 1157 ASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDREGVEYGGMVPVLR 1216
            + AM RVKLAASLGASLVWISGG  LVQ+L KETLPSWF+SVH    E  E GGMVP+LR
Sbjct: 1150 SLAMRRVKLAASLGASLVWISGGLNLVQALIKETLPSWFISVHG---EEDELGGMVPMLR 1209

Query: 1217 GYALAFFSVLCGTFSWGIDSISSASKRRAKLLDAHLEFLASALDGKFSIGCDWATWRAYV 1276
            GYALA+F++L   F+WG+DS   ASKRR ++L  HLEF+ SAL+GK S+GCDWATW+AYV
Sbjct: 1210 GYALAYFAILSSAFAWGVDSSYPASKRRPRVLWLHLEFMVSALEGKISLGCDWATWQAYV 1269

Query: 1277 SGFVSLLVRCAPKWLLEVDLKVLERLGKGLRQLNEEELALALLESGGLTAMGAAAELIIE 1303
            +GFVSL+V+C P W+LEVD++V++RL K LRQ NE++LALALL +GGL  MGAA ELI+E
Sbjct: 1270 TGFVSLMVQCTPAWVLEVDVEVIKRLSKSLRQWNEQDLALALLCAGGLGTMGAATELIVE 1270

[Close]
BLAST of Cp4.1LG15g00030 vs. Swiss-Prot
Match: MD33A_ARATH (Mediator of RNA polymerase II transcription subunit 33A OS=Arabidopsis thaliana GN=MED33A PE=1 SV=1)

HSP 1 Score: 1406.7 bits (3640), Expect = 0.0e+00
Identity = 744/1319 (56.41%), Postives = 950/1319 (72.02%), Query Frame = 1 

Query: 17   VWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAHLLVSHICWDNHVPIMW 76
            VWD V+ELTK AQE   DP LWA QLSS+L   +V LPS ELA ++VS+ICWDN+VPI+W
Sbjct: 9    VWDCVIELTKMAQENCVDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICWDNNVPIVW 68

Query: 77   KFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTLEVNGPNYP 136
            KFLE+AM  ++V PL+V+ALL+ R +P R  + AAYR+YLELL R++F+    ++GP+Y 
Sbjct: 69   KFLERAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFTIKDHISGPHYQ 128

Query: 137  RIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLDDEGLLELPAEERSVWL 196
            ++M ++ ++L LS++F L T +PG+L+VE  F +V  LLDA+L DEGLLEL  +  S WL
Sbjct: 129  KVMISVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLLELSQDSSSQWL 188

Query: 197  IRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCLAHQNMP 256
            ++ Q  DME+D  + + EK T + E L  +NT  AIE+I +FL+N   AR+L L   N  
Sbjct: 189  VKSQ--DMEIDAPERYNEK-TGSLEKLQSLNTIMAIELIAEFLRNTVIARLLYLVSSNRA 248

Query: 257  LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQEGKTTSQLEFHDVMAS 316
              W  F Q++QLL  NS  L+++K++    LL   S++    S + K TS  + + ++  
Sbjct: 249  SKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSARKSNAIVDF 308

Query: 317  GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDASWH 376
            GSL S AG  HG + S+LWLP+DL  EDAMDG QV  TSA+E +  L K+L+ +N ++WH
Sbjct: 309  GSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTLKEINGSTWH 368

Query: 377  NTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEDEC 436
            +TFLGLWIAALRL+QRERDP EGP+PRLDT LCM L I  L V  +IEE + E   E   
Sbjct: 369  DTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEEGKYESVME--- 428

Query: 437  SPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVANQAAAKAVMFISGVAVG 496
                         K R  L+TSLQ+LG++  LL PP+ V+  AN+AA KA++F+SG  VG
Sbjct: 429  -------------KLRDDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILFLSGGNVG 488

Query: 497  NEYYDCVSMNDTPINCC--------------------------YVNTRSSQVPRSASSQV 556
               +D ++M D P+NC                           YVN R +Q+P+S  ++V
Sbjct: 489  KSCFDVINMKDMPVNCSGNMRHLIVEACIARNILDMSAYSWPGYVNGRINQIPQSLPNEV 548

Query: 557  VGWSSFMKGSSLTPSMVNALEATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVR 616
              WSSF+KG+ L  +MVN L + PASSLAE+EK++E+A+ GS DEKISAA++LCGASL R
Sbjct: 549  PCWSSFVKGAPLNAAMVNTLVSVPASSLAELEKLFEVAVKGSDDEKISAATVLCGASLTR 608

Query: 617  GWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMV 676
            GWN+QEHTV +++RLLSPP+PADY  ++++LI YA  LNV++VGI SVD +QIFSLHGMV
Sbjct: 609  GWNIQEHTVEYLTRLLSPPVPADYSRAENHLIGYACMLNVVIVGIGSVDSIQIFSLHGMV 668

Query: 677  PLLAGQLMPICEAFGSSTPK-SWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKG 736
            P LA  LMPICE FGS TP  SW L SGE ++ ++VFS AFTLLL+LWRF+HPPIE+  G
Sbjct: 669  PQLACSLMPICEEFGSYTPSVSWTLPSGEAISAYSVFSNAFTLLLKLWRFNHPPIEHGVG 728

Query: 737  DARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKF-SLEPTFMDSFPKLKG 796
            D   VGSQLTPE+LL VRNS L S     +DR + +RLS++ +  S +P F+DSFPKLK 
Sbjct: 729  DVPTVGSQLTPEHLLSVRNSYLVSSEILDRDRNR-KRLSEVARAASCQPVFVDSFPKLKV 788

Query: 797  WYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSANE 856
            WYRQHQ CIA+   GL  G+PVHQTV+ALL M F K+ RG Q+L    S +S+SSG+A+E
Sbjct: 789  WYRQHQRCIAATLSGLTHGSPVHQTVEALLNMTFGKV-RGSQTLNPVNSGTSSSSGAASE 848

Query: 857  EASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR-----LKDLADFLPASFATIVCYF 916
            +++I+ + PAWDIL+A P+V+DAALTAC HGRLSPR     LKDLADFLPAS ATIV YF
Sbjct: 849  DSNIRPEFPAWDILKAVPYVVDAALTACTHGRLSPRQLATGLKDLADFLPASLATIVSYF 908

Query: 917  SAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPSLALGGSFPAMLPLP 976
            SAEV+RG+WKP FMNG DWPSPA  LS VE+ I KILA TGVD+PSLA GGS PA LPLP
Sbjct: 909  SAEVSRGVWKPVFMNGVDWPSPATNLSTVEEYITKILATTGVDIPSLAPGGSSPATLPLP 968

Query: 977  LAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASLWAQKVKRWNDFLVF 1036
            LAA +SLTITYK+DKASER L L GPAL  L AGC WPC PI+ASLW QK KRW DFLVF
Sbjct: 969  LAAFVSLTITYKIDKASERFLNLAGPALECLAAGCPWPCMPIVASLWTQKAKRWFDFLVF 1028

Query: 1037 SASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHGFGSHVLGGMSPVAP 1096
            SASRTVF HN DAV+QLL++CF++TLGL  + +++ GGVGALLGHGFGSH  GG+SPVAP
Sbjct: 1029 SASRTVFLHNQDAVIQLLRNCFSATLGLNAAPMSNDGGVGALLGHGFGSHFYGGISPVAP 1088

Query: 1097 GILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLKKSKHGMRCEQVSFA 1156
            GILYLR++R +RD + + EEI+SLL+ SV+DIA   L KEK EKLK  K+G R  Q S A
Sbjct: 1089 GILYLRMYRALRDTVSVSEEILSLLIHSVEDIAQNRLSKEKLEKLKTVKNGSRYGQSSLA 1148

Query: 1157 SAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDREGVEYGGMVPVLRG 1216
            +AM +VKLAASL ASLVW++GG G+V  L KET+PSWFLS    DRE      +V  LRG
Sbjct: 1149 TAMTQVKLAASLSASLVWLTGGLGVVHVLIKETIPSWFLSTDKSDREQGP-SDLVAELRG 1208

Query: 1217 YALAFFSVLCGTFSWGIDSISSASKRRAK-LLDAHLEFLASALDGKFSIGCDWATWRAYV 1276
            +ALA+F VLCG  +WG+DS SSASKRR + +L +HLEF+ASALDGK S+GC+ ATWR Y+
Sbjct: 1209 HALAYFVVLCGALTWGVDSRSSASKRRRQAILGSHLEFIASALDGKISVGCETATWRTYI 1268

Query: 1277 SGFVSLLVRCAPKWLLEVDLKVLERLGKGLRQLNEEELALALLESGGLTAMGAAAELII 1302
            SG VSL+V C P W+ E+D +VL+ L  GLR+  ++ELA+ LL  GGL  M  AA+ II
Sbjct: 1269 SGLVSLMVSCLPLWVTEIDTEVLKSLSNGLRKWGKDELAIVLLSLGGLKTMDYAADFII 1305

[Close]
BLAST of Cp4.1LG15g00030 vs. TrEMBL
Match: A0A061DRW3_THECC (Reduced epidermal fluorescence 4, putative isoform 1 OS=Theobroma cacao GN=TCM_004452 PE=4 SV=1)

HSP 1 Score: 1824.7 bits (4725), Expect = 0.0e+00
Identity = 948/1332 (71.17%), Postives = 1080/1332 (81.08%), Query Frame = 1 

Query: 11   LQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAHLLVSHICWDN 70
            +Q  + VW++VLE TKSAQ KNSDPLLWAVQLSSSLNSA VSLPS++LAHLLVSHICWDN
Sbjct: 5    IQAASPVWESVLEQTKSAQGKNSDPLLWAVQLSSSLNSAGVSLPSIDLAHLLVSHICWDN 64

Query: 71   HVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTLEV 130
            HVPI WK+LEKAMT + VPP+LV+ALLSTR IP RK  PAAYRLY+ELL RH FS   ++
Sbjct: 65   HVPITWKYLEKAMTVKFVPPILVLALLSTRVIPNRKFHPAAYRLYMELLRRHTFSLKCQI 124

Query: 131  NGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLDDEGLLELPAE 190
            N PNY + M++IDDVLHLSQIFGLQ  EPGLL+VE  FSIVW LLDASLDDEGLLEL  E
Sbjct: 125  NKPNYQKTMKSIDDVLHLSQIFGLQVSEPGLLLVEFVFSIVWQLLDASLDDEGLLELTPE 184

Query: 191  ERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCL 250
            +RS+W    Q  DME+D  D+F EK+ E  + + K NT  AIEIIG+FLQNK T+RIL L
Sbjct: 185  KRSIWPTITQ--DMEIDTPDNFNEKRNEQLDVMYKGNTTMAIEIIGEFLQNKVTSRILFL 244

Query: 251  AHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQEGKTTSQLEF 310
            A +NMP HW  F Q+L +LAA SV LRN+K +TP+ LL  TSD  + LS+E K  S  EF
Sbjct: 245  ARRNMPSHWGAFIQQLSILAAQSVALRNSKHLTPDALLQLTSDSRKVLSRECKIKSHEEF 304

Query: 311  HDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLIC------LI 370
            H ++ SG L SS+GQ +G + SA WLPIDLFLEDAMDGSQV AT AVERL        L+
Sbjct: 305  HAIIGSGCLTSSSGQCYGTSSSAHWLPIDLFLEDAMDGSQVAATGAVERLTGRVNLAGLV 364

Query: 371  KSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIE 430
            K+L+AVN  +WH+TFLGLWIAALRL+QRERD SEGPVPRLDTCLCMLLSIT L V  I+E
Sbjct: 365  KALQAVNGTTWHDTFLGLWIAALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVE 424

Query: 431  EEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVANQAAA 490
            EEE EL +E +CSP+    EKQ+ G+ R+ LI+SLQML +YE+LLTPPQSV  VANQAAA
Sbjct: 425  EEESELIDESDCSPTNQTKEKQAPGRCRKDLISSLQMLSDYEALLTPPQSVRSVANQAAA 484

Query: 491  KAVMFISGVAVGNEYYDCVSMNDTPINCC--------------------------YVNTR 550
            KA+MFISG+ VGN YY+C+S+ND P+NC                           YVN R
Sbjct: 485  KAIMFISGLTVGNGYYECMSINDMPMNCSGNMRHLIVEACIARNLLDTSAYIWPGYVNAR 544

Query: 551  SSQVPRSASSQVVGWSSFMKGSSLTPSMVNALEATPASSLAEIEKIYEIAINGSGDEKIS 610
            ++ +P S  SQV GWSS MKGS LTP+++NAL ATPASSLAEIEKIYEIA  GS +EKIS
Sbjct: 545  AN-IPCSVPSQVPGWSSLMKGSPLTPTLINALIATPASSLAEIEKIYEIATKGSDEEKIS 604

Query: 611  AASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVGISSV 670
            AASILCGASLVRGWN+QEH +LFI+ LLSPP+PADY GSDS+LI+YAP LNVLLVGISSV
Sbjct: 605  AASILCGASLVRGWNIQEHNILFITSLLSPPVPADYSGSDSHLINYAPLLNVLLVGISSV 664

Query: 671  DCVQIFSLHGMVPLLAGQLMPICEAFGSSTPK-SWILTSGEELTCHAVFSLAFTLLLRLW 730
            DCVQIFSLHGMVPLLAG LMP+CE FGS+ P  SW L +GEELT HAVF+ AFTLLLRLW
Sbjct: 665  DCVQIFSLHGMVPLLAGTLMPLCEVFGSTAPTVSWTLPTGEELTSHAVFTNAFTLLLRLW 724

Query: 731  RFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEP 790
            RF HPP+E V GDA PVGSQL+P+YLLLVRNS+L +FGKSPKDRLK++RLSK L FSL+ 
Sbjct: 725  RFDHPPLERVMGDATPVGSQLSPDYLLLVRNSKLLAFGKSPKDRLKIKRLSKNLNFSLDI 784

Query: 791  TFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTSTTS 850
             FMDSFPKLK WYRQHQECIAS   GLV G  VHQ VDALL MMF+KI+RGGQS TSTTS
Sbjct: 785  IFMDSFPKLKCWYRQHQECIASTLSGLVQGTTVHQIVDALLNMMFRKISRGGQSFTSTTS 844

Query: 851  ASSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR-----LKDLADFL 910
             SS+SS S  E+A  +LKVPAWDILE TP+VLDAALTACAHGRLSPR     LKDLADFL
Sbjct: 845  GSSSSSASGAEDAHTRLKVPAWDILEGTPYVLDAALTACAHGRLSPRELATGLKDLADFL 904

Query: 911  PASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPSLAL 970
            PA+  TIV YFSAEVTRGIWKPAFMNGTDWPSPAA LS+VEQ IKKILAATGVDVPSLA+
Sbjct: 905  PATLGTIVSYFSAEVTRGIWKPAFMNGTDWPSPAANLSMVEQHIKKILAATGVDVPSLAV 964

Query: 971  GGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASLWAQ 1030
            GGS P  LPLPLAAL+SLTITYKLDK SER L L+GPALNSL  GC WPC PIIASLWAQ
Sbjct: 965  GGSSPTTLPLPLAALVSLTITYKLDKGSERFLILIGPALNSLAEGCPWPCMPIIASLWAQ 1024

Query: 1031 KVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHGFGS 1090
            KVKRWNDFLVFSASRTVFHH+SDAVVQLL+SCFTSTLGL  S + S GGVGALLGHGFGS
Sbjct: 1025 KVKRWNDFLVFSASRTVFHHSSDAVVQLLRSCFTSTLGLSPSIIYSNGGVGALLGHGFGS 1084

Query: 1091 HVLGGMSPVAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLKKSK 1150
            H  GGMSPVAPGILYLRVHR VRD +F+ EEIVSLLM SV++IA +GL +EK+EKLKK+K
Sbjct: 1085 HFSGGMSPVAPGILYLRVHRSVRDIMFMTEEIVSLLMSSVREIASSGLSQEKSEKLKKTK 1144

Query: 1151 HGMRCEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDREGV 1210
             G+R  QVS  +AM RVKLAASLGASLVW+SGG  LVQSL KETLPSWF+S H+ +++G 
Sbjct: 1145 FGLRYGQVSLGAAMTRVKLAASLGASLVWLSGGLSLVQSLIKETLPSWFISAHAPEKDGG 1204

Query: 1211 EYGGMVPVLRGYALAFFSVLCGTFSWGIDSISSASKRRAKLLDAHLEFLASALDGKFSIG 1270
            E GG+V +L GYALA+F+VLCGTF+WG+DS S ASKRR K+L AHLEFLASALDGK S+G
Sbjct: 1205 EPGGVVAMLGGYALAYFAVLCGTFAWGVDSASPASKRRPKVLGAHLEFLASALDGKISLG 1264

Query: 1271 CDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLERLGKGLRQLNEEELALALLESGGLTA 1305
            CD ATWRAYV+GFVSL+V C  KW+L+VD+ VL+RL  GLRQ NEEELA+ALL  GG+ A
Sbjct: 1265 CDSATWRAYVTGFVSLMVACTQKWVLDVDVYVLKRLSNGLRQWNEEELAMALLGLGGVGA 1324

[Close]
BLAST of Cp4.1LG15g00030 vs. TrEMBL
Match: F6HQ63_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0104g00390 PE=4 SV=1)

HSP 1 Score: 1806.6 bits (4678), Expect = 0.0e+00
Identity = 937/1322 (70.88%), Postives = 1069/1322 (80.86%), Query Frame = 1 

Query: 16   GVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAHLLVSHICWDNHVPIM 75
            G+WD+VLELTKSAQE+NSDPLLWAVQLSS LNSA  SLPS ELAHLLVSHICW N+VPI 
Sbjct: 18   GLWDSVLELTKSAQERNSDPLLWAVQLSSILNSAGTSLPSPELAHLLVSHICWANNVPIT 77

Query: 76   WKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTLEVNGPNY 135
            WKFLEKA++ RI PP+LV+ALLS+R IP R+L PAAYRLY+ELL RH FS T E+NGPNY
Sbjct: 78   WKFLEKAVSGRIAPPMLVLALLSSRVIPNRRLYPAAYRLYMELLKRHTFSFTSEINGPNY 137

Query: 136  PRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLDDEGLLELPAEERSVW 195
             +IM++IDDVLHLSQIFGLQ CEPG L+VE  FSIVW LLDASLDDEGLLEL  E++S W
Sbjct: 138  QKIMKSIDDVLHLSQIFGLQVCEPGALVVEFIFSIVWQLLDASLDDEGLLELAPEKKSKW 197

Query: 196  LIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCLAHQNM 255
              R Q  DM++D  DSF EK+T+  E L KVNT  AIEIIG F QNK T++IL LA +NM
Sbjct: 198  PTRSQ--DMDIDGQDSFNEKRTDRQEGLCKVNTVMAIEIIGDFFQNKVTSKILYLARRNM 257

Query: 256  PLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQEGKTTSQLEFHDVMA 315
              HW  F QRL++LAANS  LRN+K I+P+ LL  TSD    L++E KT+ Q +FH V+A
Sbjct: 258  FSHWGSFIQRLRVLAANSTALRNSKHISPDALLQLTSDARIVLTRECKTSLQKQFHAVVA 317

Query: 316  SGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDASW 375
            SGSL SSAGQ HGV+WSALWLPID+FLED MD SQV+ATSAVE L  L+K+L+AVN  SW
Sbjct: 318  SGSLISSAGQCHGVSWSALWLPIDMFLEDTMDDSQVVATSAVETLTGLVKALQAVNGTSW 377

Query: 376  HNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEDE 435
            HNTFLG+WIAALRL+QRERDPSEGPVPRLDTCLCMLLSIT LA+  IIEEEE  L +E  
Sbjct: 378  HNTFLGVWIAALRLVQRERDPSEGPVPRLDTCLCMLLSITPLAIVNIIEEEESTLIDEAG 437

Query: 436  CSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVANQAAAKAVMFISGVAV 495
             SP+  R EKQ S K R+ LI+SLQ+LG+YE LLT PQS+ +VANQA AKA+MF+SGV  
Sbjct: 438  RSPTNLRKEKQISVKHRKDLISSLQLLGDYEGLLTVPQSLSLVANQAVAKAMMFVSGVTS 497

Query: 496  GNEYYDCVSMNDTPINCC--------------------------YVNTRSSQVPRSASSQ 555
            G+ Y DC+SMND P+NC                           YVN RS+Q+PRS    
Sbjct: 498  GSGYLDCMSMNDLPMNCSGNMRHLIVEACIARNLLDTSAYLWPGYVNGRSNQLPRSVPGP 557

Query: 556  VVGWSSFMKGSSLTPSMVNALEATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLV 615
            + GWSS MKGS LTP M+N L +TPASSLAEIEKIYEIA+NGS DEKISAA+ILCGASLV
Sbjct: 558  MPGWSSLMKGSPLTPPMINVLVSTPASSLAEIEKIYEIAVNGSDDEKISAAAILCGASLV 617

Query: 616  RGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGM 675
            RGWN+QEHTV FI++LLSPP+PADY G+DS+LI YAPFLNVLLVGISSVDCVQI+SLHG+
Sbjct: 618  RGWNIQEHTVFFITKLLSPPVPADYSGTDSHLIGYAPFLNVLLVGISSVDCVQIYSLHGL 677

Query: 676  VPLLAGQLMPICEAFGSSTPK-SWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVK 735
            VP LAG LMPICE FGS  PK S  LT+GEE++ H VFS AF LLLRLWRF+HPP+E+V 
Sbjct: 678  VPQLAGALMPICEVFGSCAPKVSCTLTTGEEISSHQVFSNAFNLLLRLWRFNHPPLEHVM 737

Query: 736  G-DARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSFPKLK 795
            G D  PVGSQLTPEYLLLVRNSQLA+ G + K   K RR S++   S EP FMDSFPKLK
Sbjct: 738  GGDIPPVGSQLTPEYLLLVRNSQLANSGNTTKGPFKYRRPSRISSPSPEPIFMDSFPKLK 797

Query: 796  GWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSAN 855
             WYRQHQ CIAS   GLV G PVHQ VDA+L MMF+K+ RGGQ LT T S SSNSSGS  
Sbjct: 798  LWYRQHQACIASALSGLVHGTPVHQVVDAVLNMMFRKMGRGGQPLTPTASGSSNSSGSGP 857

Query: 856  EEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR-----LKDLADFLPASFATIVCY 915
            E+AS++LK+PAWDILEA PFVLDAALTACAHGRLSPR     LKDL+DFLPAS ATI  Y
Sbjct: 858  EDASLRLKLPAWDILEAIPFVLDAALTACAHGRLSPRELATGLKDLSDFLPASLATIASY 917

Query: 916  FSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPSLALGGSFPAMLPL 975
            FSAEVTRGIWKPAFMNGTDWPSPAA LS+VEQQIKK+LAATGVDVPSLA  GS PA LPL
Sbjct: 918  FSAEVTRGIWKPAFMNGTDWPSPAANLSMVEQQIKKVLAATGVDVPSLAAVGSSPATLPL 977

Query: 976  PLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASLWAQKVKRWNDFLV 1035
            PLAAL+SLTITYKLD+A+ERLL +VGPALNSL AGC WPC PIIASLWAQKVKRW D+L+
Sbjct: 978  PLAALVSLTITYKLDRATERLLTVVGPALNSLAAGCPWPCMPIIASLWAQKVKRWADYLI 1037

Query: 1036 FSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHGFGSHVLGGMSPVA 1095
            FSASRTVFHH SDAVVQLLKSCFTSTLGL +S V+S GGVGALLGHGFGSH  GGMSPVA
Sbjct: 1038 FSASRTVFHHKSDAVVQLLKSCFTSTLGLNSSPVSSNGGVGALLGHGFGSHYSGGMSPVA 1097

Query: 1096 PGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLKKSKHGMRCEQVSF 1155
            PGILYLRVHR VRD +F+ E ++SLLM SV+DIA  GLPKE+ EKLKK+K+GMR  QVS 
Sbjct: 1098 PGILYLRVHRDVRDVMFMTEVVLSLLMQSVRDIASCGLPKERLEKLKKTKYGMRYGQVSL 1157

Query: 1156 ASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDREGVEYGGMVPVLR 1215
            A+AM RVKLAASLGAS+VWISGG  LVQSL KETLPSWF+SVH  + EG E   M  +L 
Sbjct: 1158 AAAMTRVKLAASLGASIVWISGGLTLVQSLIKETLPSWFISVHGSEHEGTESEEMAAMLG 1217

Query: 1216 GYALAFFSVLCGTFSWGIDSISSASKRRAKLLDAHLEFLASALDGKFSIGCDWATWRAYV 1275
            GYALA+F+VLCGTF+WG+D +S ASKRR K+L AHLEFLA+ALDGK S+GC W TWRAYV
Sbjct: 1218 GYALAYFAVLCGTFAWGVDLMSPASKRRPKVLGAHLEFLANALDGKISLGCVWGTWRAYV 1277

Query: 1276 SGFVSLLVRCAPKWLLEVDLKVLERLGKGLRQLNEEELALALLESGGLTAMGAAAELIIE 1305
               V+L+V C P W+ EVD++VL+R+ KGLRQ NEEELA+ALL  GG+ AMGAAAE+I+E
Sbjct: 1278 PALVTLMVGCTPAWIPEVDVEVLKRVSKGLRQWNEEELAIALLGLGGIHAMGAAAEVIVE 1337

[Close]
BLAST of Cp4.1LG15g00030 vs. TrEMBL
Match: A0A067JPN7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21970 PE=4 SV=1)

HSP 1 Score: 1801.2 bits (4664), Expect = 0.0e+00
Identity = 927/1338 (69.28%), Postives = 1078/1338 (80.57%), Query Frame = 1 

Query: 1    MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH 60
            MAVS Q P Q      +WD VLELTKSAQ+KNSDPLLWA+QLSS LNSA V+LPS ELAH
Sbjct: 1    MAVSLQQPSQ----QSLWDWVLELTKSAQDKNSDPLLWAIQLSSRLNSAGVTLPSTELAH 60

Query: 61   LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120
            LLVSH C++NHVPIMWKFLEK++  +I PP LV+ALLSTR IP RKL PAAYRLYLEL+ 
Sbjct: 61   LLVSHTCFENHVPIMWKFLEKSLALKIAPPTLVLALLSTRVIPNRKLHPAAYRLYLELVK 120

Query: 121  RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD 180
            RH FS + ++NGPNY +IM+  DD LHLS IFGLQ C+PGL++VE  FS+VW LLDASLD
Sbjct: 121  RHAFSFSSQINGPNYAKIMKLTDDALHLSHIFGLQVCKPGLILVEFVFSMVWQLLDASLD 180

Query: 181  DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240
            DEGLL+L +E++S WL   Q  DM++D H+SFGEK+ E++E L   NT  AIE+IG+FLQ
Sbjct: 181  DEGLLDLTSEKKSRWLTSLQ--DMDIDGHESFGEKRNEHNEGLKSANTTMAIELIGEFLQ 240

Query: 241  NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQ 300
            NK T+RIL LA +NM  HW GF QR++LLAA+S  LRN+K IT E+LL  TSD  + LS 
Sbjct: 241  NKVTSRILYLARKNMSSHWRGFIQRVRLLAAHSAALRNSKHITAEILLQLTSDTRQLLSG 300

Query: 301  EGKTTSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
            + K  SQ +FH VM+S SL SSAGQ HG +WSALWLPIDLFLEDAMDGSQV A SAVE L
Sbjct: 301  DTKRISQQDFHAVMSSRSLISSAGQCHGASWSALWLPIDLFLEDAMDGSQVAAISAVENL 360

Query: 361  ICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT 420
              L+K+L+AVN  +WH+TFLGLW+A+LRL+QRER+PSEGPVPRLDTCLCMLL  TTLAV 
Sbjct: 361  TGLVKALQAVNGTTWHDTFLGLWMASLRLVQREREPSEGPVPRLDTCLCMLLCTTTLAVA 420

Query: 421  IIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVAN 480
             IIEEEEGEL  E E +P+    EKQ  GK R+GLIT+LQ+LG+Y+SLLTPPQSV +VAN
Sbjct: 421  NIIEEEEGELIMETESNPTDQMKEKQGLGKCREGLITALQLLGDYDSLLTPPQSVSLVAN 480

Query: 481  QAAAKAVMFISGVAVGNEYYDCVSMNDTPINCC--------------------------- 540
            QAAAKA++FISGV  GN YY+ +SMND P++C                            
Sbjct: 481  QAAAKAMLFISGVTSGNSYYESMSMNDMPMSCSAGNMRHLIVEACIARFLLDTSAYVWPG 540

Query: 541  YVNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALEATPASSLAEIEKIYEIAINGSG 600
            YVN  S+Q+PR    Q+ GWS+ MKGS LTPSM+N L ATPASSL EIEK+YEIA+NGS 
Sbjct: 541  YVNAHSNQIPRGVLGQMPGWSALMKGSPLTPSMINTLVATPASSLPEIEKVYEIALNGSN 600

Query: 601  DEKISAASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLV 660
            DEK+SAA+ILCGASL RGWN+QEHT+LFI +LLSPP PADY G+DS+LIDYAP LN+LLV
Sbjct: 601  DEKLSAATILCGASLSRGWNIQEHTILFIIKLLSPPFPADYSGNDSHLIDYAPLLNILLV 660

Query: 661  GISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSTPK-SWILTSGEELTCHAVFSLAFTL 720
            G+SSVDCVQI SLHG+VPLLAG L+PICE FGSS PK SW L SGEE+TCHAVFS AF+L
Sbjct: 661  GLSSVDCVQILSLHGLVPLLAGALIPICEVFGSSVPKVSWTLPSGEEITCHAVFSNAFSL 720

Query: 721  LLRLWRFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLK 780
            L+RLWRFHHPP+ENV GD  PV S+L PEYLL+VRNSQLASFG SP+D +K RR SK+L 
Sbjct: 721  LVRLWRFHHPPLENVTGDKTPVASKLGPEYLLVVRNSQLASFGSSPRDFIKSRRFSKILN 780

Query: 781  FSLEPTFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGG-QS 840
             SLEP FMDSFPKL+ WYRQH ECIAS   GLV G PVHQ VDALL MMFK+INRGG QS
Sbjct: 781  ISLEPIFMDSFPKLQLWYRQHLECIASTFSGLVNGTPVHQLVDALLNMMFKRINRGGVQS 840

Query: 841  LTSTTSASSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR-----LK 900
            LTSTTS SS SSGS  EEA ++L+VPAWDILEATPF LDAALTACAHG+LSPR     LK
Sbjct: 841  LTSTTSGSS-SSGSGAEEAYVRLQVPAWDILEATPFALDAALTACAHGKLSPRELATGLK 900

Query: 901  DLADFLPASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVD 960
            DLADFLPAS ATIV Y SAEVTRGIWKPA+MNGTDWPSPAA LS VEQQIKKIL+ATGVD
Sbjct: 901  DLADFLPASLATIVSYLSAEVTRGIWKPAYMNGTDWPSPAANLSTVEQQIKKILSATGVD 960

Query: 961  VPSLALGGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPII 1020
            VPSL +GG+ PA LPLPLAAL+SLTITY+LDK SER L L+GPALN+L + C WPC PII
Sbjct: 961  VPSLPVGGNSPATLPLPLAALVSLTITYRLDKVSERQLVLIGPALNALASSCPWPCMPII 1020

Query: 1021 ASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALL 1080
            A+LWAQKVKRW+DFLVFSAS TVFHH  DAVVQLLKSCFT+TLG    +++S GGVGALL
Sbjct: 1021 AALWAQKVKRWSDFLVFSASSTVFHHKGDAVVQLLKSCFTATLGFSAPHISSNGGVGALL 1080

Query: 1081 GHGFGSHVLGGMSPVAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAE 1140
            GHGFGSH +GG+SPVAPG LY+RVHR +RD +FL E+IVS+LM SVK+IA +GLP+E  E
Sbjct: 1081 GHGFGSHFVGGISPVAPGFLYVRVHRSLRDFVFLTEKIVSILMHSVKEIANSGLPRETVE 1140

Query: 1141 KLKKSKHGMRCEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHS 1200
            KL+K+K+GMR  QVS  +AM RVKLAASLGASLVWISGGS LVQSL KETLPSWF+S HS
Sbjct: 1141 KLRKTKYGMRYGQVSLTAAMMRVKLAASLGASLVWISGGSSLVQSLVKETLPSWFISGHS 1200

Query: 1201 VDREGVEYGGMVPVLRGYALAFFSVLCGTFSWGIDSISSASKRRAKLLDAHLEFLASALD 1260
            +++E  E GG+V +LRGYALA+  VL GTF+WGIDS S ASKRR  +L  HL+F+ASALD
Sbjct: 1201 LEQEDAESGGLVAMLRGYALAYLVVLSGTFAWGIDSESPASKRRPMVLSCHLKFIASALD 1260

Query: 1261 GKFSIGCDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLERLGKGLRQLNEEELALALLE 1305
            GK S+G DWAT RA+ +G +SL+V C PKWL EV++ +L+RL KGLRQ NEE+LAL LL 
Sbjct: 1261 GKISLGSDWATTRAFATGVLSLMVACTPKWLTEVNVDLLKRLSKGLRQWNEEQLALDLLG 1320

[Close]
BLAST of Cp4.1LG15g00030 vs. TrEMBL
Match: M5VJA7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000301mg PE=4 SV=1)

HSP 1 Score: 1775.8 bits (4598), Expect = 0.0e+00
Identity = 922/1338 (68.91%), Postives = 1064/1338 (79.52%), Query Frame = 1 

Query: 1    MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH 60
            MAVS Q P     ++ +WDTVL+LTKSAQ+KNSDPLLWAVQLS+SLNSA V+LPSVELAH
Sbjct: 2    MAVSVQQP-----LSHLWDTVLQLTKSAQDKNSDPLLWAVQLSNSLNSAGVALPSVELAH 61

Query: 61   LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120
            LLVSHICW NHVPI WKFLEKA+T +IVPP+LV+ALLST+                    
Sbjct: 62   LLVSHICWANHVPITWKFLEKALTVKIVPPMLVLALLSTK-------------------- 121

Query: 121  RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD 180
             H F    ++NGPN  +I+++IDDVLHLSQ++GLQ CEPG+++VE  FSI+W LLDASLD
Sbjct: 122  -HTFLFASQLNGPNCQKIIKSIDDVLHLSQLYGLQVCEPGVVIVEFVFSIIWQLLDASLD 181

Query: 181  DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240
            DEGLLEL  +++S W  RP+  DME+D HD F EK++E +E L K NTA AIEII +FLQ
Sbjct: 182  DEGLLELTPDKKSRWSTRPE--DMEIDGHDCFNEKRSEQNEGLQKANTAMAIEIIVEFLQ 241

Query: 241  NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQ 300
            NK T+RILCL  +N+P HW GF Q++Q+LAANS VLR  K ITPE LL  TSD  R L++
Sbjct: 242  NKVTSRILCLTRRNLPSHWGGFIQKMQVLAANSSVLRTLKHITPESLLQLTSDTRRLLTR 301

Query: 301  EGKTTSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
            E K  S+  FH V++SGSL SSA QSHGV+ SA WLPIDLFLEDAMDGS+V   SAVE L
Sbjct: 302  ECKIISRQGFHAVLSSGSLRSSASQSHGVSSSAFWLPIDLFLEDAMDGSEVAIISAVETL 361

Query: 361  ICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT 420
              L+K+L+AVN  +WHN FLGLWIAALRL+QRERDP EGPVPRLDTCLCMLLSITTLAVT
Sbjct: 362  TGLVKALQAVNSTTWHNAFLGLWIAALRLVQRERDPREGPVPRLDTCLCMLLSITTLAVT 421

Query: 421  IIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVAN 480
             IIEEEE +L EE E   +  R E Q+ GKRR+GLI  LQ LG+YE+LLTPPQSV  V N
Sbjct: 422  NIIEEEEAQLMEEIEGDRTNQRKE-QAPGKRREGLIMCLQRLGDYETLLTPPQSVCSVVN 481

Query: 481  QAAAKAVMFISGVAVGNEYYDCVSMNDTPINCC--------------------------Y 540
            QAAAKA+M+ SG+ V N YY+ VS+ND PINC                           Y
Sbjct: 482  QAAAKAIMYRSGLTVSNGYYESVSVNDVPINCMGNLRHLIVEACIARNLLDTSAYFWPGY 541

Query: 541  VNTRSSQV----PRSASSQVVGWSSFMKGSSLTPSMVNALEATPASSLAEIEKIYEIAIN 600
            V+ RSSQV    P     QV GWSS MKGS LTPS+VNAL ATPASSLAEIEKIYEIA+N
Sbjct: 542  VSARSSQVLRNVPGQVPGQVPGWSSIMKGSPLTPSLVNALVATPASSLAEIEKIYEIAVN 601

Query: 601  GSGDEKISAASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNV 660
            GS +EKISA +ILCGASL+RGWN+QEH  LFI  LLSPP+PADY GSDS+LI YA F NV
Sbjct: 602  GSDEEKISAVTILCGASLIRGWNIQEHICLFIINLLSPPVPADYSGSDSHLISYASFFNV 661

Query: 661  LLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSTPK-SWILTSGEELTCHAVFSLA 720
            LLVG+SS+D VQIFSL G+VPLLA  LMPICE FGSS P  SW  T+GEEL+CHAVFS A
Sbjct: 662  LLVGVSSIDTVQIFSLLGLVPLLAAALMPICEVFGSSVPNISWTPTTGEELSCHAVFSNA 721

Query: 721  FTLLLRLWRFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSK 780
            FTLLLRLWRF HPP+E+V GD   VG+Q+ PEYLL++RNS+LAS G SP DR+K RR+SK
Sbjct: 722  FTLLLRLWRFDHPPLEHVMGDLPTVGNQVGPEYLLVLRNSRLASLGNSPMDRIKSRRVSK 781

Query: 781  LLKFSLEPTFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGG 840
             + F  E   MD FPKLK WY+QHQ+CI S   GLVPG PVHQ VDALLTMMF+KINR  
Sbjct: 782  FITFPSETITMDRFPKLKLWYQQHQKCICSTLSGLVPGTPVHQIVDALLTMMFRKINRSS 841

Query: 841  QSLTSTTSASSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR----- 900
            Q LT  TS SSNSS S  +E+SI+LKVPAWDILEATPFVLDAALTACAHGRLSPR     
Sbjct: 842  QPLTPATSGSSNSSASGTDESSIRLKVPAWDILEATPFVLDAALTACAHGRLSPRELATG 901

Query: 901  LKDLADFLPASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATG 960
            LK+LAD+LPA+ AT+V YFSAEVTRGIWKPA MNGTDWPSPAA LS+VEQQIKKILAATG
Sbjct: 902  LKELADYLPATLATMVSYFSAEVTRGIWKPACMNGTDWPSPAANLSIVEQQIKKILAATG 961

Query: 961  VDVPSLALGGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTP 1020
            VDVPSLA+GGS PAMLPLP AAL+SLTITYKLD+ASER L L+GPALNSL AGC WPC P
Sbjct: 962  VDVPSLAVGGSAPAMLPLPFAALVSLTITYKLDRASERALTLIGPALNSLAAGCPWPCMP 1021

Query: 1021 IIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGA 1080
            I+ASLWAQKVKRW+D+LVF+AS+TVFHHN DAVVQLLKSCFTSTLGL +S   S G VGA
Sbjct: 1022 ILASLWAQKVKRWSDYLVFTASQTVFHHNGDAVVQLLKSCFTSTLGLSSSRAYSNGSVGA 1081

Query: 1081 LLGHGFGSHVLGGMSPVAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEK 1140
            LLGHGFGSH  GG+SPVAPGILYLRVHR VRD +F+ EE++SLLM SV+DIA  GLP+++
Sbjct: 1082 LLGHGFGSHFSGGISPVAPGILYLRVHRSVRDVMFMTEEVLSLLMFSVRDIASCGLPRDR 1141

Query: 1141 AEKLKKSKHGMRCEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSV 1200
             ++LKK KHGMR  QVS A+AMARV++AA+LGA+LVWISGGS LVQSL KETLPSWF+S 
Sbjct: 1142 VDRLKKIKHGMRYGQVSLAAAMARVRIAATLGATLVWISGGSNLVQSLIKETLPSWFIST 1201

Query: 1201 HSVDREGVEYGGMVPVLRGYALAFFSVLCGTFSWGIDSISSASKRRAKLLDAHLEFLASA 1260
            H +D+EG E GGMV +L GYALA+F+VLCGTF+WG+DS++ ASKRR K+L AHLEFLASA
Sbjct: 1202 HGLDQEGRESGGMVAMLGGYALAYFAVLCGTFAWGVDSVTPASKRRPKVLGAHLEFLASA 1261

Query: 1261 LDGKFSIGCDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLERLGKGLRQLNEEELALAL 1303
            LDGK S+GCDWA WRAYVSGFVSL+V C  KW+LEVD++VL+RL K LR+LNEEELALAL
Sbjct: 1262 LDGKISLGCDWAMWRAYVSGFVSLMVACTQKWVLEVDVEVLKRLSKELRRLNEEELALAL 1310

[Close]
BLAST of Cp4.1LG15g00030 vs. TrEMBL
Match: A0A0D2TEF0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G134500 PE=4 SV=1)

HSP 1 Score: 1774.2 bits (4594), Expect = 0.0e+00
Identity = 917/1326 (69.16%), Postives = 1062/1326 (80.09%), Query Frame = 1 

Query: 11   LQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAHLLVSHICWDN 70
            +Q  + VW++VLELTKSAQ KN DPLLWAVQLSSSLNSA +SLPS++LAHLLVSHICWDN
Sbjct: 5    VQAASPVWESVLELTKSAQYKNRDPLLWAVQLSSSLNSAGISLPSIDLAHLLVSHICWDN 64

Query: 71   HVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTLEV 130
            HVPI WKFLEKA+T + VP +LV+ALLSTR IP RK  PAAYRLY+ELL RH FS   ++
Sbjct: 65   HVPITWKFLEKALTVKFVPSMLVLALLSTRVIPNRKFHPAAYRLYMELLRRHAFSLQCQI 124

Query: 131  NGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLDDEGLLELPAE 190
            NGPNY +IM+++ DVLHLSQIFG+Q  EPGLL+VE  FSIV  LLDASLDDEGLLEL  E
Sbjct: 125  NGPNYQKIMKSVGDVLHLSQIFGVQVSEPGLLLVEFVFSIVLQLLDASLDDEGLLELTPE 184

Query: 191  ERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCL 250
            +RS+W    Q  DME+D  D+F EK++E+ + L K NT  AIEIIG+FLQNK T+RIL L
Sbjct: 185  KRSIWPTVTQ--DMEIDSVDNFNEKRSEHHDVLCKGNTTMAIEIIGEFLQNKVTSRILFL 244

Query: 251  AHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQEGKTTSQLEF 310
            A +NM  HW  F Q+L++LAA SV LRN K ITPE  L+ TSD H+ +S++ KT SQ E 
Sbjct: 245  ARRNMSSHWGTFLQQLRVLAAKSVALRNAKHITPEAFLNLTSDMHKVVSRKCKTISQQEL 304

Query: 311  HDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAV 370
            + V+ SGSL +S+GQ HG + SA WLPIDLFLEDAMDGSQV AT AVE L  L+K+L+AV
Sbjct: 305  NAVIGSGSLTTSSGQYHGTSPSAHWLPIDLFLEDAMDGSQVAATGAVESLTGLVKALQAV 364

Query: 371  NDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGEL 430
            N  +WH+TFLGLWIAALRL+QRERD SEGPVPRLDTCLCMLLSIT L V  I+EEEE EL
Sbjct: 365  NGTTWHDTFLGLWIAALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESEL 424

Query: 431  KEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVANQAAAKAVMFI 490
             +  +CSP+    EKQS G+ RQ LI SLQMLG+YE+LLTPPQ V  VANQAAAKA+MF+
Sbjct: 425  IDGCDCSPTNQIKEKQSPGRCRQDLICSLQMLGDYEALLTPPQPVRSVANQAAAKAIMFV 484

Query: 491  SGVAVGNEYYDCVSMNDTPINCC--------------------------YVNTRSSQVPR 550
            SG+ VGN Y++C+S+ND P+NC                           YVN R++ +PR
Sbjct: 485  SGLTVGNGYHECMSINDMPMNCSGNMRHLIVEACIARNLLDTSAYVWPGYVNARAN-IPR 544

Query: 551  SASSQVVGWSSFMKGSSLTPSMVNALEATPASSLAEIEKIYEIAINGSGDEKISAASILC 610
            +   QV+GWSS MKGS LTP+++NAL ATPASSLAEIEKIYEIA  GS DEKISAASILC
Sbjct: 545  NVPVQVIGWSSLMKGSPLTPTLINALIATPASSLAEIEKIYEIATKGSDDEKISAASILC 604

Query: 611  GASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIF 670
            GASLVRGWN+QEHT+LFI+ LLSPP+PADY GS+S+LI Y PF N+LLVGIS VDCVQIF
Sbjct: 605  GASLVRGWNIQEHTILFITSLLSPPVPADYSGSESHLISYGPFFNILLVGISPVDCVQIF 664

Query: 671  SLHGMVPLLAGQLMPICEAFGSSTPK-SWILTSGEELTCHAVFSLAFTLLLRLWRFHHPP 730
            SLHG+VPLLAG LMP+CE FGS++P  SW L +GEELT HAVFS AFTLLLRLWRF+HPP
Sbjct: 665  SLHGLVPLLAGTLMPLCEVFGSTSPNVSWTLPTGEELTSHAVFSNAFTLLLRLWRFNHPP 724

Query: 731  IENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSF 790
             EN  GDA PVGSQLTPEYLLLVRNS+L+ FGKSPKD +K++R+SK L  SLE  FMDSF
Sbjct: 725  FENAMGDATPVGSQLTPEYLLLVRNSKLSDFGKSPKDHMKLKRMSKNLNISLELIFMDSF 784

Query: 791  PKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSS 850
            PKLK WYRQHQECIAS   GLV G  VHQ VDALL MMF+KI+RGGQSLTSTTS SS+S 
Sbjct: 785  PKLKSWYRQHQECIASTLTGLVQGTTVHQIVDALLNMMFRKISRGGQSLTSTTSGSSSSP 844

Query: 851  GSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR-----LKDLADFLPASFAT 910
             S  E+ S++LKVPAWDILE  P+VLDAALTACAHGRL PR     LKDLAD LPA+ AT
Sbjct: 845  ASGAEDVSMRLKVPAWDILEGAPYVLDAALTACAHGRLLPRDLATGLKDLADLLPATLAT 904

Query: 911  IVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPSLALGGSFPA 970
            IV Y SAEVTRGIWKP FMNGTDWPSP+A L +VEQQIKKI+AATGVD+PSLA+GGS PA
Sbjct: 905  IVSYLSAEVTRGIWKPVFMNGTDWPSPSANLFMVEQQIKKIIAATGVDIPSLAIGGSSPA 964

Query: 971  MLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASLWAQKVKRWN 1030
            MLPLPLAAL+SLTITYKLDKASER + L+GPAL+SL   C WPC PIIASLWAQKVKRW+
Sbjct: 965  MLPLPLAALVSLTITYKLDKASERFIVLIGPALSSLAESCPWPCMPIIASLWAQKVKRWS 1024

Query: 1031 DFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHGFGSHVLGGM 1090
            DFLVFSASRTVFHHN DAVVQLL+SCFTS  GL  S + S GGVGALLGHGFGSH  GGM
Sbjct: 1025 DFLVFSASRTVFHHNIDAVVQLLRSCFTSIPGLSPSTIYSNGGVGALLGHGFGSHFSGGM 1084

Query: 1091 SPVAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLKKSKHGMRCE 1150
            S VAPGILYLRVHR VR+ +F+ EEIVSLLM SV+DIA +GL +E  EKLKK+K G+R  
Sbjct: 1085 SAVAPGILYLRVHRSVRNIMFMTEEIVSLLMSSVRDIANSGLFRENLEKLKKAKFGLRYR 1144

Query: 1151 QVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDREGVEYGGMV 1210
            QVS  +A  RV+ AASLGASLVW+SGG  LVQ L +ETLPSWFLS H+ D++G E GG+V
Sbjct: 1145 QVSLGAATTRVRFAASLGASLVWLSGGLSLVQLLIQETLPSWFLSAHTPDQDGGEPGGLV 1204

Query: 1211 PVLRGYALAFFSVLCGTFSWGIDSISSASKRRAKLLDAHLEFLASALDGKFSIGCDWATW 1270
             +L GYALA+F VLCGT +WG+DS S  SKRR K+L AHLEFLASA+DGK S+GC++ATW
Sbjct: 1205 AMLSGYALAYFVVLCGTLAWGVDSSSPTSKRRPKVLGAHLEFLASAIDGKISLGCEYATW 1264

Query: 1271 RAYVSGFVSLLVRCAPKWLLEVDLKVLERLGKGLRQLNEEELALALLESGGLTAMGAAAE 1305
             AYV+GFVSL+V C  KW+L+V++ VL RL  GLRQ NEEELA+ALL  GG  A  +AAE
Sbjct: 1265 HAYVTGFVSLMVGCTKKWVLDVNVDVLRRLSNGLRQWNEEELAIALLGLGGAEATASAAE 1324

[Close]
BLAST of Cp4.1LG15g00030 vs. TAIR10
Match: AT2G48110.1 (AT2G48110.1 reduced epidermal fluorescence 4)

HSP 1 Score: 1429.8 bits (3700), Expect = 0.0e+00
Identity = 782/1320 (59.24%), Postives = 935/1320 (70.83%), Query Frame = 1 

Query: 17   VWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAHLLVSHICWDNHVPIMW 76
            +W++V  L +SAQEKN DPL WA+QL  +L SA +SLPS +LA  LV+HI W+NH P+ W
Sbjct: 10   LWESVTSLIRSAQEKNVDPLHWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSPLSW 69

Query: 77   KFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTLEVNGPNYP 136
            K LEKA++  IVPPLLV+ALLS R IP RKL PAAYRLY+ELL RH FS    +  P Y 
Sbjct: 70   KLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFMPLIRAPGYH 129

Query: 137  RIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLDDEGLLELPAEERSVWL 196
            + M +IDD+LHLS+ FG+Q  EPG +++   FSIVW LLDASLD+EGLLEL + +RS W 
Sbjct: 130  KTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASLDEEGLLELTSNKRSKW- 189

Query: 197  IRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCLAHQNMP 256
                PHDM+LD             EN +K N               +    L  A+  M 
Sbjct: 190  -PSSPHDMDLD-----------GLENSVKRN---------------ENHDALEKANTEMA 249

Query: 257  LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQEGKTTSQLEFHDVMAS 316
            +      + +Q    N V  R         +LH  S      + E KT  + EFH +++S
Sbjct: 250  I------ELIQEFLQNKVTSR---------ILHLASQ-----NMESKTIPRGEFHAIVSS 309

Query: 317  GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDASWH 376
            GS  +    S      ALWLPIDLF ED MDG+Q  A SAVE L  L+K+L+A N  SWH
Sbjct: 310  GSKLALTSDS------ALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKALQAANSTSWH 369

Query: 377  NTFLGLWIAALRLIQRE-------------------RDPSEGPVPRLDTCLCMLLSITTL 436
            + FL LW+AALRL+QRE                   RDP EGPVPR DT LC+LLS+T L
Sbjct: 370  DAFLALWLAALRLVQRENLCLRYCFFMHMLEILSEERDPIEGPVPRTDTFLCVLLSVTPL 429

Query: 437  AVTIIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIV 496
            AV  IIEEEE +  ++   SPS    EK+  GK RQGLI SLQ LG+YESLLTPP+SV  
Sbjct: 430  AVANIIEEEESQWIDQTSSSPSNQWKEKK--GKCRQGLINSLQQLGDYESLLTPPRSVQS 489

Query: 497  VANQAAAKAVMFISGVAVGNEYYDCVSMNDTPINCCYVNTRSSQVPRSASSQVV------ 556
            VANQAAAKA+MFISG+   N  Y+  SM+++   CC V      +       V       
Sbjct: 490  VANQAAAKAIMFISGITNSNGSYENTSMSESASGCCKVRFSLFTLKMFVVMGVYLLCNIS 549

Query: 557  GWSSFMKGSSLTPSMVNALEATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVRG 616
             WS  MKGS LTPS+ N+L  TPASSLAEIEK+YE+A  GS DEKI+ ASILCGASL RG
Sbjct: 550  CWSLVMKGSPLTPSLTNSLITTPASSLAEIEKMYEVATTGSEDEKIAVASILCGASLFRG 609

Query: 617  WNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVP 676
            W++QEH ++FI  LLSPP PAD  GS S+LI+ APFLNVLLVGIS +DCV IFSLHG+VP
Sbjct: 610  WSIQEHVIIFIVTLLSPPAPADLSGSYSHLINSAPFLNVLLVGISPIDCVHIFSLHGVVP 669

Query: 677  LLAGQLMPICEAFGSSTPK-SWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKGD 736
            LLAG LMPICEAFGS  P  +W L +GE ++ HAVFS AFTLLLRLWRF HPP++ V GD
Sbjct: 670  LLAGALMPICEAFGSGVPNITWTLPTGELISSHAVFSTAFTLLLRLWRFDHPPLDYVLGD 729

Query: 737  ARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSFPKLKGWY 796
              PVG Q +PEYLLLVRN +L  FGKSPKDR+  RR SK++  S++P FMDSFP+LK WY
Sbjct: 730  VPPVGPQPSPEYLLLVRNCRLECFGKSPKDRMARRRFSKVIDISVDPIFMDSFPRLKQWY 789

Query: 797  RQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSANEEA 856
            RQHQEC+ASI   L  G+PVH  VD+LL+MMFKK N+GG    + +S SS+ S S  +++
Sbjct: 790  RQHQECMASILSELKTGSPVHHIVDSLLSMMFKKANKGGSQSLTPSSGSSSLSTSGGDDS 849

Query: 857  SIKLKVPAWDILEATPFVLDAALTACAHGRLSPR-----LKDLADFLPASFATIVCYFSA 916
            S +LK+PAWDILEA PFVLDAALTACAHG LSPR     LK LADFLPA+  T+V YFS+
Sbjct: 850  SDQLKLPAWDILEAAPFVLDAALTACAHGSLSPRELATGLKILADFLPATLGTMVSYFSS 909

Query: 917  EVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPSLALGGSFPAMLPLPLA 976
            EVTRG+WKP  MNGTDWPSPAA L+ VEQQI+KILAATGVDVP L   G   A LPLPLA
Sbjct: 910  EVTRGLWKPVSMNGTDWPSPAANLASVEQQIEKILAATGVDVPRLPADGISAATLPLPLA 969

Query: 977  ALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASLWAQKVKRWNDFLVFSA 1036
            AL+SLTITYKLDKA+ER L LVGPAL+SL A C WPC PI+ SLW QKVKRW+DFL+FSA
Sbjct: 970  ALVSLTITYKLDKATERFLVLVGPALDSLAAACPWPCMPIVTSLWTQKVKRWSDFLIFSA 1029

Query: 1037 SRTVFHHNSDAVVQLLKSCFTSTLGL-GNSNVNSGGGVGALLGHGFGSHVLGGMSPVAPG 1096
            SRTVFHHN DAV+QLL+SCFT TLGL   S + S GGVGALLGHGFGS   GG+S  APG
Sbjct: 1030 SRTVFHHNRDAVIQLLRSCFTCTLGLTPTSQLCSYGGVGALLGHGFGSRYSGGISTAAPG 1089

Query: 1097 ILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLKKSKHGMR--CEQVSF 1156
            ILY++VHR +RD +FL EEI+SLLM SVK IA   LP  +AEKLKK+K G R    QVS 
Sbjct: 1090 ILYIKVHRSIRDVMFLTEEILSLLMFSVKSIATRELPAGQAEKLKKTKDGSRYGIGQVSL 1149

Query: 1157 ASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDREGVEYGGMVPVLR 1216
            + AM RVKLAASLGASLVWISGG  LVQ+L KETLPSWF+SVH    E  E GGMVP+LR
Sbjct: 1150 SLAMRRVKLAASLGASLVWISGGLNLVQALIKETLPSWFISVHG---EEDELGGMVPMLR 1209

Query: 1217 GYALAFFSVLCGTFSWGIDSISSASKRRAKLLDAHLEFLASALDGKFSIGCDWATWRAYV 1276
            GYALA+F++L   F+WG+DS   ASKRR ++L  HLEF+ SAL+GK S+GCDWATW+AYV
Sbjct: 1210 GYALAYFAILSSAFAWGVDSSYPASKRRPRVLWLHLEFMVSALEGKISLGCDWATWQAYV 1269

Query: 1277 SGFVSLLVRCAPKWLLEVDLKVLERLGKGLRQLNEEELALALLESGGLTAMGAAAELIIE 1303
            +GFVSL+V+C P W+LEVD++V++RL K LRQ NE++LALALL +GGL  MGAA ELI+E
Sbjct: 1270 TGFVSLMVQCTPAWVLEVDVEVIKRLSKSLRQWNEQDLALALLCAGGLGTMGAATELIVE 1270

[Close]
BLAST of Cp4.1LG15g00030 vs. TAIR10
Match: AT3G23590.1 (AT3G23590.1 REF4-related 1)

HSP 1 Score: 1406.7 bits (3640), Expect = 0.0e+00
Identity = 744/1319 (56.41%), Postives = 950/1319 (72.02%), Query Frame = 1 

Query: 17   VWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAHLLVSHICWDNHVPIMW 76
            VWD V+ELTK AQE   DP LWA QLSS+L   +V LPS ELA ++VS+ICWDN+VPI+W
Sbjct: 9    VWDCVIELTKMAQENCVDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICWDNNVPIVW 68

Query: 77   KFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTLEVNGPNYP 136
            KFLE+AM  ++V PL+V+ALL+ R +P R  + AAYR+YLELL R++F+    ++GP+Y 
Sbjct: 69   KFLERAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFTIKDHISGPHYQ 128

Query: 137  RIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLDDEGLLELPAEERSVWL 196
            ++M ++ ++L LS++F L T +PG+L+VE  F +V  LLDA+L DEGLLEL  +  S WL
Sbjct: 129  KVMISVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLLELSQDSSSQWL 188

Query: 197  IRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCLAHQNMP 256
            ++ Q  DME+D  + + EK T + E L  +NT  AIE+I +FL+N   AR+L L   N  
Sbjct: 189  VKSQ--DMEIDAPERYNEK-TGSLEKLQSLNTIMAIELIAEFLRNTVIARLLYLVSSNRA 248

Query: 257  LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQEGKTTSQLEFHDVMAS 316
              W  F Q++QLL  NS  L+++K++    LL   S++    S + K TS  + + ++  
Sbjct: 249  SKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSARKSNAIVDF 308

Query: 317  GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDASWH 376
            GSL S AG  HG + S+LWLP+DL  EDAMDG QV  TSA+E +  L K+L+ +N ++WH
Sbjct: 309  GSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTLKEINGSTWH 368

Query: 377  NTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEDEC 436
            +TFLGLWIAALRL+QRERDP EGP+PRLDT LCM L I  L V  +IEE + E   E   
Sbjct: 369  DTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEEGKYESVME--- 428

Query: 437  SPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVANQAAAKAVMFISGVAVG 496
                         K R  L+TSLQ+LG++  LL PP+ V+  AN+AA KA++F+SG  VG
Sbjct: 429  -------------KLRDDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILFLSGGNVG 488

Query: 497  NEYYDCVSMNDTPINCC--------------------------YVNTRSSQVPRSASSQV 556
               +D ++M D P+NC                           YVN R +Q+P+S  ++V
Sbjct: 489  KSCFDVINMKDMPVNCSGNMRHLIVEACIARNILDMSAYSWPGYVNGRINQIPQSLPNEV 548

Query: 557  VGWSSFMKGSSLTPSMVNALEATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVR 616
              WSSF+KG+ L  +MVN L + PASSLAE+EK++E+A+ GS DEKISAA++LCGASL R
Sbjct: 549  PCWSSFVKGAPLNAAMVNTLVSVPASSLAELEKLFEVAVKGSDDEKISAATVLCGASLTR 608

Query: 617  GWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMV 676
            GWN+QEHTV +++RLLSPP+PADY  ++++LI YA  LNV++VGI SVD +QIFSLHGMV
Sbjct: 609  GWNIQEHTVEYLTRLLSPPVPADYSRAENHLIGYACMLNVVIVGIGSVDSIQIFSLHGMV 668

Query: 677  PLLAGQLMPICEAFGSSTPK-SWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKG 736
            P LA  LMPICE FGS TP  SW L SGE ++ ++VFS AFTLLL+LWRF+HPPIE+  G
Sbjct: 669  PQLACSLMPICEEFGSYTPSVSWTLPSGEAISAYSVFSNAFTLLLKLWRFNHPPIEHGVG 728

Query: 737  DARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKF-SLEPTFMDSFPKLKG 796
            D   VGSQLTPE+LL VRNS L S     +DR + +RLS++ +  S +P F+DSFPKLK 
Sbjct: 729  DVPTVGSQLTPEHLLSVRNSYLVSSEILDRDRNR-KRLSEVARAASCQPVFVDSFPKLKV 788

Query: 797  WYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSANE 856
            WYRQHQ CIA+   GL  G+PVHQTV+ALL M F K+ RG Q+L    S +S+SSG+A+E
Sbjct: 789  WYRQHQRCIAATLSGLTHGSPVHQTVEALLNMTFGKV-RGSQTLNPVNSGTSSSSGAASE 848

Query: 857  EASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR-----LKDLADFLPASFATIVCYF 916
            +++I+ + PAWDIL+A P+V+DAALTAC HGRLSPR     LKDLADFLPAS ATIV YF
Sbjct: 849  DSNIRPEFPAWDILKAVPYVVDAALTACTHGRLSPRQLATGLKDLADFLPASLATIVSYF 908

Query: 917  SAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPSLALGGSFPAMLPLP 976
            SAEV+RG+WKP FMNG DWPSPA  LS VE+ I KILA TGVD+PSLA GGS PA LPLP
Sbjct: 909  SAEVSRGVWKPVFMNGVDWPSPATNLSTVEEYITKILATTGVDIPSLAPGGSSPATLPLP 968

Query: 977  LAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASLWAQKVKRWNDFLVF 1036
            LAA +SLTITYK+DKASER L L GPAL  L AGC WPC PI+ASLW QK KRW DFLVF
Sbjct: 969  LAAFVSLTITYKIDKASERFLNLAGPALECLAAGCPWPCMPIVASLWTQKAKRWFDFLVF 1028

Query: 1037 SASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHGFGSHVLGGMSPVAP 1096
            SASRTVF HN DAV+QLL++CF++TLGL  + +++ GGVGALLGHGFGSH  GG+SPVAP
Sbjct: 1029 SASRTVFLHNQDAVIQLLRNCFSATLGLNAAPMSNDGGVGALLGHGFGSHFYGGISPVAP 1088

Query: 1097 GILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLKKSKHGMRCEQVSFA 1156
            GILYLR++R +RD + + EEI+SLL+ SV+DIA   L KEK EKLK  K+G R  Q S A
Sbjct: 1089 GILYLRMYRALRDTVSVSEEILSLLIHSVEDIAQNRLSKEKLEKLKTVKNGSRYGQSSLA 1148

Query: 1157 SAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDREGVEYGGMVPVLRG 1216
            +AM +VKLAASL ASLVW++GG G+V  L KET+PSWFLS    DRE      +V  LRG
Sbjct: 1149 TAMTQVKLAASLSASLVWLTGGLGVVHVLIKETIPSWFLSTDKSDREQGP-SDLVAELRG 1208

Query: 1217 YALAFFSVLCGTFSWGIDSISSASKRRAK-LLDAHLEFLASALDGKFSIGCDWATWRAYV 1276
            +ALA+F VLCG  +WG+DS SSASKRR + +L +HLEF+ASALDGK S+GC+ ATWR Y+
Sbjct: 1209 HALAYFVVLCGALTWGVDSRSSASKRRRQAILGSHLEFIASALDGKISVGCETATWRTYI 1268

Query: 1277 SGFVSLLVRCAPKWLLEVDLKVLERLGKGLRQLNEEELALALLESGGLTAMGAAAELII 1302
            SG VSL+V C P W+ E+D +VL+ L  GLR+  ++ELA+ LL  GGL  M  AA+ II
Sbjct: 1269 SGLVSLMVSCLPLWVTEIDTEVLKSLSNGLRKWGKDELAIVLLSLGGLKTMDYAADFII 1305

[Close]
BLAST of Cp4.1LG15g00030 vs. NCBI nr
Match: gi|659096980|ref|XP_008449381.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 33B-like isoform X1 [Cucumis melo])

HSP 1 Score: 2312.7 bits (5992), Expect = 0.0e+00
Identity = 1196/1336 (89.52%), Postives = 1237/1336 (92.59%), Query Frame = 1 

Query: 1    MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH 60
            MAVSAQPPGQLQGIAG+WDTVLE+TKSAQ+KN DPLLWAVQLSS+LNSA VSLPSVELA 
Sbjct: 1    MAVSAQPPGQLQGIAGLWDTVLEVTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQ 60

Query: 61   LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120
            LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKL+PAAYRLYLELLS
Sbjct: 61   LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLQPAAYRLYLELLS 120

Query: 121  RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD 180
            RHVFSST ++ GPNY RIMQTIDDVLHL+QIFGLQTCEPG+LMVELFFSIVW LLDASLD
Sbjct: 121  RHVFSSTSQIYGPNYQRIMQTIDDVLHLTQIFGLQTCEPGVLMVELFFSIVWQLLDASLD 180

Query: 181  DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240
            DEGLL LP EE+S WLIRPQ HDMELDVHDSFGEKKTENSE+LLKVNTAKAIEIIGQFLQ
Sbjct: 181  DEGLLALPGEEKSAWLIRPQLHDMELDVHDSFGEKKTENSESLLKVNTAKAIEIIGQFLQ 240

Query: 241  NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQ 300
            NKKT RILCLA +NMPL WAGFAQRLQLL ANSVVL N KLITPEVLLHWTSDK++ LSQ
Sbjct: 241  NKKTERILCLALRNMPLQWAGFAQRLQLLGANSVVLGNAKLITPEVLLHWTSDKNKLLSQ 300

Query: 301  EGKTTSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
            +GKT SQLEF DVM+SGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301  KGKT-SQLEFRDVMSSGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360

Query: 361  ICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT 420
            ICLIKSLRAVND SWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSI+TLAVT
Sbjct: 361  ICLIKSLRAVNDTSWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAVT 420

Query: 421  IIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVAN 480
            IIIEEEE E KE+D CSPSKSRDEKQSSG  R+GLITSLQMLGEYESLLTPPQS+I VAN
Sbjct: 421  IIIEEEEVEPKEDD-CSPSKSRDEKQSSGMCRKGLITSLQMLGEYESLLTPPQSIIAVAN 480

Query: 481  QAAAKAVMFISGVAVGNEYYDCVSMNDTPINCC--------------------------Y 540
            QAAAKAVMFISGVAVGNEYYDC SMND PINC                           Y
Sbjct: 481  QAAAKAVMFISGVAVGNEYYDCASMNDAPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540

Query: 541  VNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALEATPASSLAEIEKIYEIAINGSGD 600
            VN  SSQVPRSAS+QVVGWSSFMKGS LTPSMVNAL ATPASSLAEIEKIYEIAINGSGD
Sbjct: 541  VNALSSQVPRSASNQVVGWSSFMKGSPLTPSMVNALVATPASSLAEIEKIYEIAINGSGD 600

Query: 601  EKISAASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVG 660
            EKISAASILCGASLVRGW LQEHT LFISRLL PPIP DY GSDSYLIDYAPFLNVLLVG
Sbjct: 601  EKISAASILCGASLVRGWYLQEHTALFISRLLLPPIPTDYSGSDSYLIDYAPFLNVLLVG 660

Query: 661  ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSTPKSWILTSGEELTCHAVFSLAFTLLL 720
            ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSS PKSWILTSGEELTCHAVFSLAFTLLL
Sbjct: 661  ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCHAVFSLAFTLLL 720

Query: 721  RLWRFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFS 780
            RLWRFHHPP+ENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSP DRLK RRLSKLLKFS
Sbjct: 721  RLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPNDRLKARRLSKLLKFS 780

Query: 781  LEPTFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTS 840
            L+P FMDSFPKLKGWYRQHQECIASI  GLVPGAPVHQ VDALLTMMF+KINRGGQSLTS
Sbjct: 781  LQPIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTS 840

Query: 841  TTSASSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR-----LKDLA 900
            TTS SSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR     LKDLA
Sbjct: 841  TTSGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLA 900

Query: 901  DFLPASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPS 960
            DFLPASFATIV YFSAEVTRGIWKPAFMNGTDWPSPAATLS+VEQQIKKILAATGVDVP 
Sbjct: 901  DFLPASFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPC 960

Query: 961  LALGGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASL 1020
            LA+GGS PAMLPLPLAALISLTITYKLDKASERLLALVGPALNSL A CSWPCTPIIASL
Sbjct: 961  LAVGGSSPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLAASCSWPCTPIIASL 1020

Query: 1021 WAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHG 1080
            WAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSN N+ GGVG LLGHG
Sbjct: 1021 WAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNGNNSGGVGTLLGHG 1080

Query: 1081 FGSHVLGGMSPVAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLK 1140
            FGSHVLGGMSPVAPGILYLRVHR VRD LF+VEEIVSLLMLSV+DIAV+GLPKEKAEKLK
Sbjct: 1081 FGSHVLGGMSPVAPGILYLRVHRSVRDVLFVVEEIVSLLMLSVRDIAVSGLPKEKAEKLK 1140

Query: 1141 KSKHGMRCEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDR 1200
            K+K+GMR EQVSFASAMARVKLAASLGASLVWISGGSGLVQSL+KETLPSWFLSVHSV+R
Sbjct: 1141 KTKYGMRYEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSVER 1200

Query: 1201 EGVEYGGMVPVLRGYALAFFSVLCGTFSWGIDSISSASKRRAKLLDAHLEFLASALDGKF 1260
            EGV YGGMV VLRG+ALAFFSVLCGTFSWGIDS SSASKRRAK+LD++LEFLASALDGKF
Sbjct: 1201 EGVNYGGMVAVLRGHALAFFSVLCGTFSWGIDSSSSASKRRAKILDSYLEFLASALDGKF 1260

Query: 1261 SIGCDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLERLGKGLRQLNEEELALALLESGG 1306
            SIGCDWATWRAYVSGFVSL+VRCAP+WLLEVDL VL RL  GLRQLNEEEL L LLESGG
Sbjct: 1261 SIGCDWATWRAYVSGFVSLIVRCAPRWLLEVDLNVLTRLSNGLRQLNEEELGLELLESGG 1320

[Close]
BLAST of Cp4.1LG15g00030 vs. NCBI nr
Match: gi|778716139|ref|XP_011657513.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 33B isoform X1 [Cucumis sativus])

HSP 1 Score: 2297.3 bits (5952), Expect = 0.0e+00
Identity = 1191/1336 (89.15%), Postives = 1231/1336 (92.14%), Query Frame = 1 

Query: 1    MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH 60
            MAVS  PPGQLQGIAG+WDTVLELTKSAQ+KN DPLLWAVQLSS+LNSA VSLPSVELA 
Sbjct: 1    MAVSTLPPGQLQGIAGLWDTVLELTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQ 60

Query: 61   LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120
            LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKL+PAAYRLYLELLS
Sbjct: 61   LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLQPAAYRLYLELLS 120

Query: 121  RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD 180
            RHVFSST ++ GPNY RIMQTIDDVLHL+QIFGLQTCEPG+LMVELFFSIVW LLDASLD
Sbjct: 121  RHVFSSTCQIYGPNYQRIMQTIDDVLHLTQIFGLQTCEPGVLMVELFFSIVWQLLDASLD 180

Query: 181  DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240
            DEGLL L  EE+S WLIRPQ HDMELDVHDSFGEK+TENSE+LLKVNTAKAIEIIGQFLQ
Sbjct: 181  DEGLLALHGEEKSAWLIRPQLHDMELDVHDSFGEKRTENSESLLKVNTAKAIEIIGQFLQ 240

Query: 241  NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQ 300
            NKKTARILCLA +NMPL WA FAQRLQLL ANSVVL N KLITPEVLLHWTSDK++ LS+
Sbjct: 241  NKKTARILCLALRNMPLQWAAFAQRLQLLGANSVVLGNAKLITPEVLLHWTSDKNKLLSR 300

Query: 301  EGKTTSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
            +GKT SQLEF DVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301  KGKT-SQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360

Query: 361  ICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT 420
            ICLIKSLRAVND SWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSI+TLAVT
Sbjct: 361  ICLIKSLRAVNDTSWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAVT 420

Query: 421  IIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVAN 480
            IIIEEEE E KE+D CSPSKSRDEKQSSG  R+GLITSLQMLGEYESLLTPPQS+I VAN
Sbjct: 421  IIIEEEEVEPKEDD-CSPSKSRDEKQSSGMCRKGLITSLQMLGEYESLLTPPQSIIAVAN 480

Query: 481  QAAAKAVMFISGVAVGNEYYDCVSMNDTPINCC--------------------------Y 540
            QAAAKAVMFISGVAVGNEYYDC SMNDTPINC                           Y
Sbjct: 481  QAAAKAVMFISGVAVGNEYYDCASMNDTPINCSGNMRHLIVEACISRNLLDTSVYFWPGY 540

Query: 541  VNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALEATPASSLAEIEKIYEIAINGSGD 600
            VN  SSQVP SAS+QVVGWSSFMKGS LTPSMVNAL ATPASSLAEIEKIYEIAINGSGD
Sbjct: 541  VNALSSQVPHSASNQVVGWSSFMKGSPLTPSMVNALVATPASSLAEIEKIYEIAINGSGD 600

Query: 601  EKISAASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVG 660
            EKISAASILCGASLVRGW LQEH  LFISRLL PPIP DY GSDSYLIDYAPFLNVLLVG
Sbjct: 601  EKISAASILCGASLVRGWYLQEHAALFISRLLLPPIPTDYSGSDSYLIDYAPFLNVLLVG 660

Query: 661  ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSTPKSWILTSGEELTCHAVFSLAFTLLL 720
            ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSS PKSWILTSGEELTCHAVFSLAFTLLL
Sbjct: 661  ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCHAVFSLAFTLLL 720

Query: 721  RLWRFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFS 780
            RLWRFHHPP+ENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSP DRLK RRLSKLLKFS
Sbjct: 721  RLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPNDRLKARRLSKLLKFS 780

Query: 781  LEPTFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTS 840
            L+P FMDSFPKLKGWYRQHQECIASI  GLVPGAPV Q VDALLTMMF+KINRGGQSLTS
Sbjct: 781  LQPIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVLQIVDALLTMMFRKINRGGQSLTS 840

Query: 841  TTSASSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR-----LKDLA 900
            TTS SSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR     LKDLA
Sbjct: 841  TTSGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLA 900

Query: 901  DFLPASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPS 960
            DFLPASFATIV YFSAEVTRGIWKPAFMNGTDWPSPAATLS+VEQQIKKILAATGVDVP 
Sbjct: 901  DFLPASFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPC 960

Query: 961  LALGGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASL 1020
            LA+GGS PAMLPLPLAALISLTITYKLDKASERLLALVGPAL+SL A CSWPCTPIIASL
Sbjct: 961  LAVGGSSPAMLPLPLAALISLTITYKLDKASERLLALVGPALSSLAASCSWPCTPIIASL 1020

Query: 1021 WAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHG 1080
            WAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSN NS GGVG LLGHG
Sbjct: 1021 WAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNGNSSGGVGTLLGHG 1080

Query: 1081 FGSHVLGGMSPVAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLK 1140
            FGSHVLGGMSPVAPGILYLRVHR VRD LF+VEEIVSLLMLSV+DIAV+GLPKEKAEKLK
Sbjct: 1081 FGSHVLGGMSPVAPGILYLRVHRSVRDVLFMVEEIVSLLMLSVRDIAVSGLPKEKAEKLK 1140

Query: 1141 KSKHGMRCEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDR 1200
            K+K+GMR EQVSFASAMARVKLAASL ASLVWISGGSGLVQSL+KE LPSWFLSVHSV+R
Sbjct: 1141 KTKYGMRYEQVSFASAMARVKLAASLAASLVWISGGSGLVQSLFKEILPSWFLSVHSVER 1200

Query: 1201 EGVEYGGMVPVLRGYALAFFSVLCGTFSWGIDSISSASKRRAKLLDAHLEFLASALDGKF 1260
            EGV YGGMV VLRGYALAFFSVLCGTFSWGIDS SSASKRRAK+LD++LEFLASALDGKF
Sbjct: 1201 EGVNYGGMVAVLRGYALAFFSVLCGTFSWGIDSSSSASKRRAKILDSYLEFLASALDGKF 1260

Query: 1261 SIGCDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLERLGKGLRQLNEEELALALLESGG 1306
            SIGCDWATWRAYVSGFVSL+VRCAP+WLLEVDL VL RL  GLRQLNEEEL LALLESGG
Sbjct: 1261 SIGCDWATWRAYVSGFVSLIVRCAPRWLLEVDLNVLTRLSNGLRQLNEEELGLALLESGG 1320

[Close]
BLAST of Cp4.1LG15g00030 vs. NCBI nr
Match: gi|659096982|ref|XP_008449382.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 33A-like isoform X2 [Cucumis melo])

HSP 1 Score: 2067.4 bits (5355), Expect = 0.0e+00
Identity = 1071/1198 (89.40%), Postives = 1105/1198 (92.24%), Query Frame = 1 

Query: 139  MQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLDDEGLLELPAEERSVWLIR 198
            MQTIDDVLHL+QIFGLQTCEPG+LMVELFFSIVW LLDASLDDEGLL LP EE+S WLIR
Sbjct: 1    MQTIDDVLHLTQIFGLQTCEPGVLMVELFFSIVWQLLDASLDDEGLLALPGEEKSAWLIR 60

Query: 199  PQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCLAHQNMPLH 258
            PQ HDMELDVHDSFGEKKTENSE+LLKVNTAKAIEIIGQFLQNKKT RILCLA +NMPL 
Sbjct: 61   PQLHDMELDVHDSFGEKKTENSESLLKVNTAKAIEIIGQFLQNKKTERILCLALRNMPLQ 120

Query: 259  WAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQEGKTTSQLEFHDVMASGS 318
            WAGFAQRLQLL ANSVVL N KLITPEVLLHWTSDK++ LSQ+GKT SQLEF DVM+SGS
Sbjct: 121  WAGFAQRLQLLGANSVVLGNAKLITPEVLLHWTSDKNKLLSQKGKT-SQLEFRDVMSSGS 180

Query: 319  LFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDASWHNT 378
            LFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVND SWHNT
Sbjct: 181  LFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDTSWHNT 240

Query: 379  FLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEDECSP 438
            FLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSI+TLAVTIIIEEEE E KE+D CSP
Sbjct: 241  FLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAVTIIIEEEEVEPKEDD-CSP 300

Query: 439  SKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVANQAAAKAVMFISGVAVGNE 498
            SKSRDEKQSSG  R+GLITSLQMLGEYESLLTPPQS+I VANQAAAKAVMFISGVAVGNE
Sbjct: 301  SKSRDEKQSSGMCRKGLITSLQMLGEYESLLTPPQSIIAVANQAAAKAVMFISGVAVGNE 360

Query: 499  YYDCVSMNDTPINCC--------------------------YVNTRSSQVPRSASSQVVG 558
            YYDC SMND PINC                           YVN  SSQVPRSAS+QVVG
Sbjct: 361  YYDCASMNDAPINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNALSSQVPRSASNQVVG 420

Query: 559  WSSFMKGSSLTPSMVNALEATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVRGW 618
            WSSFMKGS LTPSMVNAL ATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVRGW
Sbjct: 421  WSSFMKGSPLTPSMVNALVATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVRGW 480

Query: 619  NLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPL 678
             LQEHT LFISRLL PPIP DY GSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPL
Sbjct: 481  YLQEHTALFISRLLLPPIPTDYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPL 540

Query: 679  LAGQLMPICEAFGSSTPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKGDAR 738
            LAGQLMPICEAFGSS PKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPP+ENVKGDAR
Sbjct: 541  LAGQLMPICEAFGSSPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDAR 600

Query: 739  PVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSFPKLKGWYRQ 798
            PVGSQLTPEYLLLVRNSQLASFGKSP DRLK RRLSKLLKFSL+P FMDSFPKLKGWYRQ
Sbjct: 601  PVGSQLTPEYLLLVRNSQLASFGKSPNDRLKARRLSKLLKFSLQPIFMDSFPKLKGWYRQ 660

Query: 799  HQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSANEEASI 858
            HQECIASI  GLVPGAPVHQ VDALLTMMF+KINRGGQSLTSTTS SSNSSGSANEEASI
Sbjct: 661  HQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASI 720

Query: 859  KLKVPAWDILEATPFVLDAALTACAHGRLSPR-----LKDLADFLPASFATIVCYFSAEV 918
            KLKVPAWDILEATPFVLDAALTACAHGRLSPR     LKDLADFLPASFATIV YFSAEV
Sbjct: 721  KLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSAEV 780

Query: 919  TRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPSLALGGSFPAMLPLPLAAL 978
            TRGIWKPAFMNGTDWPSPAATLS+VEQQIKKILAATGVDVP LA+GGS PAMLPLPLAAL
Sbjct: 781  TRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPCLAVGGSSPAMLPLPLAAL 840

Query: 979  ISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASLWAQKVKRWNDFLVFSASR 1038
            ISLTITYKLDKASERLLALVGPALNSL A CSWPCTPIIASLWAQKVKRWNDFLVFSASR
Sbjct: 841  ISLTITYKLDKASERLLALVGPALNSLAASCSWPCTPIIASLWAQKVKRWNDFLVFSASR 900

Query: 1039 TVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHGFGSHVLGGMSPVAPGILY 1098
            TVFHHNSDAVVQLLKSCFTSTLGLGNSN N+ GGVG LLGHGFGSHVLGGMSPVAPGILY
Sbjct: 901  TVFHHNSDAVVQLLKSCFTSTLGLGNSNGNNSGGVGTLLGHGFGSHVLGGMSPVAPGILY 960

Query: 1099 LRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLKKSKHGMRCEQVSFASAMA 1158
            LRVHR VRD LF+VEEIVSLLMLSV+DIAV+GLPKEKAEKLKK+K+GMR EQVSFASAMA
Sbjct: 961  LRVHRSVRDVLFVVEEIVSLLMLSVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMA 1020

Query: 1159 RVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDREGVEYGGMVPVLRGYALA 1218
            RVKLAASLGASLVWISGGSGLVQSL+KETLPSWFLSVHSV+REGV YGGMV VLRG+ALA
Sbjct: 1021 RVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSVEREGVNYGGMVAVLRGHALA 1080

Query: 1219 FFSVLCGTFSWGIDSISSASKRRAKLLDAHLEFLASALDGKFSIGCDWATWRAYVSGFVS 1278
            FFSVLCGTFSWGIDS SSASKRRAK+LD++LEFLASALDGKFSIGCDWATWRAYVSGFVS
Sbjct: 1081 FFSVLCGTFSWGIDSSSSASKRRAKILDSYLEFLASALDGKFSIGCDWATWRAYVSGFVS 1140

Query: 1279 LLVRCAPKWLLEVDLKVLERLGKGLRQLNEEELALALLESGGLTAMGAAAELIIEGGF 1306
            L+VRCAP+WLLEVDL VL RL  GLRQLNEEEL L LLESGG+ AMGAAAELIIEGGF
Sbjct: 1141 LIVRCAPRWLLEVDLNVLTRLSNGLRQLNEEELGLELLESGGVNAMGAAAELIIEGGF 1196

[Close]
BLAST of Cp4.1LG15g00030 vs. NCBI nr
Match: gi|778716142|ref|XP_011657514.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 33A isoform X2 [Cucumis sativus])

HSP 1 Score: 2054.6 bits (5322), Expect = 0.0e+00
Identity = 1067/1198 (89.07%), Postives = 1101/1198 (91.90%), Query Frame = 1 

Query: 139  MQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLDDEGLLELPAEERSVWLIR 198
            MQTIDDVLHL+QIFGLQTCEPG+LMVELFFSIVW LLDASLDDEGLL L  EE+S WLIR
Sbjct: 1    MQTIDDVLHLTQIFGLQTCEPGVLMVELFFSIVWQLLDASLDDEGLLALHGEEKSAWLIR 60

Query: 199  PQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCLAHQNMPLH 258
            PQ HDMELDVHDSFGEK+TENSE+LLKVNTAKAIEIIGQFLQNKKTARILCLA +NMPL 
Sbjct: 61   PQLHDMELDVHDSFGEKRTENSESLLKVNTAKAIEIIGQFLQNKKTARILCLALRNMPLQ 120

Query: 259  WAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQEGKTTSQLEFHDVMASGS 318
            WA FAQRLQLL ANSVVL N KLITPEVLLHWTSDK++ LS++GKT SQLEF DVMASGS
Sbjct: 121  WAAFAQRLQLLGANSVVLGNAKLITPEVLLHWTSDKNKLLSRKGKT-SQLEFRDVMASGS 180

Query: 319  LFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDASWHNT 378
            LFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVND SWHNT
Sbjct: 181  LFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDTSWHNT 240

Query: 379  FLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEDECSP 438
            FLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSI+TLAVTIIIEEEE E KE+D CSP
Sbjct: 241  FLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAVTIIIEEEEVEPKEDD-CSP 300

Query: 439  SKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVANQAAAKAVMFISGVAVGNE 498
            SKSRDEKQSSG  R+GLITSLQMLGEYESLLTPPQS+I VANQAAAKAVMFISGVAVGNE
Sbjct: 301  SKSRDEKQSSGMCRKGLITSLQMLGEYESLLTPPQSIIAVANQAAAKAVMFISGVAVGNE 360

Query: 499  YYDCVSMNDTPINCC--------------------------YVNTRSSQVPRSASSQVVG 558
            YYDC SMNDTPINC                           YVN  SSQVP SAS+QVVG
Sbjct: 361  YYDCASMNDTPINCSGNMRHLIVEACISRNLLDTSVYFWPGYVNALSSQVPHSASNQVVG 420

Query: 559  WSSFMKGSSLTPSMVNALEATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVRGW 618
            WSSFMKGS LTPSMVNAL ATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVRGW
Sbjct: 421  WSSFMKGSPLTPSMVNALVATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVRGW 480

Query: 619  NLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPL 678
             LQEH  LFISRLL PPIP DY GSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPL
Sbjct: 481  YLQEHAALFISRLLLPPIPTDYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPL 540

Query: 679  LAGQLMPICEAFGSSTPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKGDAR 738
            LAGQLMPICEAFGSS PKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPP+ENVKGDAR
Sbjct: 541  LAGQLMPICEAFGSSPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDAR 600

Query: 739  PVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSFPKLKGWYRQ 798
            PVGSQLTPEYLLLVRNSQLASFGKSP DRLK RRLSKLLKFSL+P FMDSFPKLKGWYRQ
Sbjct: 601  PVGSQLTPEYLLLVRNSQLASFGKSPNDRLKARRLSKLLKFSLQPIFMDSFPKLKGWYRQ 660

Query: 799  HQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSANEEASI 858
            HQECIASI  GLVPGAPV Q VDALLTMMF+KINRGGQSLTSTTS SSNSSGSANEEASI
Sbjct: 661  HQECIASILSGLVPGAPVLQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASI 720

Query: 859  KLKVPAWDILEATPFVLDAALTACAHGRLSPR-----LKDLADFLPASFATIVCYFSAEV 918
            KLKVPAWDILEATPFVLDAALTACAHGRLSPR     LKDLADFLPASFATIV YFSAEV
Sbjct: 721  KLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSAEV 780

Query: 919  TRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPSLALGGSFPAMLPLPLAAL 978
            TRGIWKPAFMNGTDWPSPAATLS+VEQQIKKILAATGVDVP LA+GGS PAMLPLPLAAL
Sbjct: 781  TRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPCLAVGGSSPAMLPLPLAAL 840

Query: 979  ISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASLWAQKVKRWNDFLVFSASR 1038
            ISLTITYKLDKASERLLALVGPAL+SL A CSWPCTPIIASLWAQKVKRWNDFLVFSASR
Sbjct: 841  ISLTITYKLDKASERLLALVGPALSSLAASCSWPCTPIIASLWAQKVKRWNDFLVFSASR 900

Query: 1039 TVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHGFGSHVLGGMSPVAPGILY 1098
            TVFHHNSDAVVQLLKSCFTSTLGLGNSN NS GGVG LLGHGFGSHVLGGMSPVAPGILY
Sbjct: 901  TVFHHNSDAVVQLLKSCFTSTLGLGNSNGNSSGGVGTLLGHGFGSHVLGGMSPVAPGILY 960

Query: 1099 LRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLKKSKHGMRCEQVSFASAMA 1158
            LRVHR VRD LF+VEEIVSLLMLSV+DIAV+GLPKEKAEKLKK+K+GMR EQVSFASAMA
Sbjct: 961  LRVHRSVRDVLFMVEEIVSLLMLSVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMA 1020

Query: 1159 RVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDREGVEYGGMVPVLRGYALA 1218
            RVKLAASL ASLVWISGGSGLVQSL+KE LPSWFLSVHSV+REGV YGGMV VLRGYALA
Sbjct: 1021 RVKLAASLAASLVWISGGSGLVQSLFKEILPSWFLSVHSVEREGVNYGGMVAVLRGYALA 1080

Query: 1219 FFSVLCGTFSWGIDSISSASKRRAKLLDAHLEFLASALDGKFSIGCDWATWRAYVSGFVS 1278
            FFSVLCGTFSWGIDS SSASKRRAK+LD++LEFLASALDGKFSIGCDWATWRAYVSGFVS
Sbjct: 1081 FFSVLCGTFSWGIDSSSSASKRRAKILDSYLEFLASALDGKFSIGCDWATWRAYVSGFVS 1140

Query: 1279 LLVRCAPKWLLEVDLKVLERLGKGLRQLNEEELALALLESGGLTAMGAAAELIIEGGF 1306
            L+VRCAP+WLLEVDL VL RL  GLRQLNEEEL LALLESGG+ AMGAAAELIIEGGF
Sbjct: 1141 LIVRCAPRWLLEVDLNVLTRLSNGLRQLNEEELGLALLESGGVNAMGAAAELIIEGGF 1196

[Close]
BLAST of Cp4.1LG15g00030 vs. NCBI nr
Match: gi|590717753|ref|XP_007050679.1| (Reduced epidermal fluorescence 4, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 1824.7 bits (4725), Expect = 0.0e+00
Identity = 948/1332 (71.17%), Postives = 1080/1332 (81.08%), Query Frame = 1 

Query: 11   LQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAHLLVSHICWDN 70
            +Q  + VW++VLE TKSAQ KNSDPLLWAVQLSSSLNSA VSLPS++LAHLLVSHICWDN
Sbjct: 5    IQAASPVWESVLEQTKSAQGKNSDPLLWAVQLSSSLNSAGVSLPSIDLAHLLVSHICWDN 64

Query: 71   HVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTLEV 130
            HVPI WK+LEKAMT + VPP+LV+ALLSTR IP RK  PAAYRLY+ELL RH FS   ++
Sbjct: 65   HVPITWKYLEKAMTVKFVPPILVLALLSTRVIPNRKFHPAAYRLYMELLRRHTFSLKCQI 124

Query: 131  NGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLDDEGLLELPAE 190
            N PNY + M++IDDVLHLSQIFGLQ  EPGLL+VE  FSIVW LLDASLDDEGLLEL  E
Sbjct: 125  NKPNYQKTMKSIDDVLHLSQIFGLQVSEPGLLLVEFVFSIVWQLLDASLDDEGLLELTPE 184

Query: 191  ERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCL 250
            +RS+W    Q  DME+D  D+F EK+ E  + + K NT  AIEIIG+FLQNK T+RIL L
Sbjct: 185  KRSIWPTITQ--DMEIDTPDNFNEKRNEQLDVMYKGNTTMAIEIIGEFLQNKVTSRILFL 244

Query: 251  AHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQEGKTTSQLEF 310
            A +NMP HW  F Q+L +LAA SV LRN+K +TP+ LL  TSD  + LS+E K  S  EF
Sbjct: 245  ARRNMPSHWGAFIQQLSILAAQSVALRNSKHLTPDALLQLTSDSRKVLSRECKIKSHEEF 304

Query: 311  HDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLIC------LI 370
            H ++ SG L SS+GQ +G + SA WLPIDLFLEDAMDGSQV AT AVERL        L+
Sbjct: 305  HAIIGSGCLTSSSGQCYGTSSSAHWLPIDLFLEDAMDGSQVAATGAVERLTGRVNLAGLV 364

Query: 371  KSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIE 430
            K+L+AVN  +WH+TFLGLWIAALRL+QRERD SEGPVPRLDTCLCMLLSIT L V  I+E
Sbjct: 365  KALQAVNGTTWHDTFLGLWIAALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVE 424

Query: 431  EEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVANQAAA 490
            EEE EL +E +CSP+    EKQ+ G+ R+ LI+SLQML +YE+LLTPPQSV  VANQAAA
Sbjct: 425  EEESELIDESDCSPTNQTKEKQAPGRCRKDLISSLQMLSDYEALLTPPQSVRSVANQAAA 484

Query: 491  KAVMFISGVAVGNEYYDCVSMNDTPINCC--------------------------YVNTR 550
            KA+MFISG+ VGN YY+C+S+ND P+NC                           YVN R
Sbjct: 485  KAIMFISGLTVGNGYYECMSINDMPMNCSGNMRHLIVEACIARNLLDTSAYIWPGYVNAR 544

Query: 551  SSQVPRSASSQVVGWSSFMKGSSLTPSMVNALEATPASSLAEIEKIYEIAINGSGDEKIS 610
            ++ +P S  SQV GWSS MKGS LTP+++NAL ATPASSLAEIEKIYEIA  GS +EKIS
Sbjct: 545  AN-IPCSVPSQVPGWSSLMKGSPLTPTLINALIATPASSLAEIEKIYEIATKGSDEEKIS 604

Query: 611  AASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVGISSV 670
            AASILCGASLVRGWN+QEH +LFI+ LLSPP+PADY GSDS+LI+YAP LNVLLVGISSV
Sbjct: 605  AASILCGASLVRGWNIQEHNILFITSLLSPPVPADYSGSDSHLINYAPLLNVLLVGISSV 664

Query: 671  DCVQIFSLHGMVPLLAGQLMPICEAFGSSTPK-SWILTSGEELTCHAVFSLAFTLLLRLW 730
            DCVQIFSLHGMVPLLAG LMP+CE FGS+ P  SW L +GEELT HAVF+ AFTLLLRLW
Sbjct: 665  DCVQIFSLHGMVPLLAGTLMPLCEVFGSTAPTVSWTLPTGEELTSHAVFTNAFTLLLRLW 724

Query: 731  RFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEP 790
            RF HPP+E V GDA PVGSQL+P+YLLLVRNS+L +FGKSPKDRLK++RLSK L FSL+ 
Sbjct: 725  RFDHPPLERVMGDATPVGSQLSPDYLLLVRNSKLLAFGKSPKDRLKIKRLSKNLNFSLDI 784

Query: 791  TFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTSTTS 850
             FMDSFPKLK WYRQHQECIAS   GLV G  VHQ VDALL MMF+KI+RGGQS TSTTS
Sbjct: 785  IFMDSFPKLKCWYRQHQECIASTLSGLVQGTTVHQIVDALLNMMFRKISRGGQSFTSTTS 844

Query: 851  ASSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR-----LKDLADFL 910
             SS+SS S  E+A  +LKVPAWDILE TP+VLDAALTACAHGRLSPR     LKDLADFL
Sbjct: 845  GSSSSSASGAEDAHTRLKVPAWDILEGTPYVLDAALTACAHGRLSPRELATGLKDLADFL 904

Query: 911  PASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPSLAL 970
            PA+  TIV YFSAEVTRGIWKPAFMNGTDWPSPAA LS+VEQ IKKILAATGVDVPSLA+
Sbjct: 905  PATLGTIVSYFSAEVTRGIWKPAFMNGTDWPSPAANLSMVEQHIKKILAATGVDVPSLAV 964

Query: 971  GGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASLWAQ 1030
            GGS P  LPLPLAAL+SLTITYKLDK SER L L+GPALNSL  GC WPC PIIASLWAQ
Sbjct: 965  GGSSPTTLPLPLAALVSLTITYKLDKGSERFLILIGPALNSLAEGCPWPCMPIIASLWAQ 1024

Query: 1031 KVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHGFGS 1090
            KVKRWNDFLVFSASRTVFHH+SDAVVQLL+SCFTSTLGL  S + S GGVGALLGHGFGS
Sbjct: 1025 KVKRWNDFLVFSASRTVFHHSSDAVVQLLRSCFTSTLGLSPSIIYSNGGVGALLGHGFGS 1084

Query: 1091 HVLGGMSPVAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLKKSK 1150
            H  GGMSPVAPGILYLRVHR VRD +F+ EEIVSLLM SV++IA +GL +EK+EKLKK+K
Sbjct: 1085 HFSGGMSPVAPGILYLRVHRSVRDIMFMTEEIVSLLMSSVREIASSGLSQEKSEKLKKTK 1144

Query: 1151 HGMRCEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDREGV 1210
             G+R  QVS  +AM RVKLAASLGASLVW+SGG  LVQSL KETLPSWF+S H+ +++G 
Sbjct: 1145 FGLRYGQVSLGAAMTRVKLAASLGASLVWLSGGLSLVQSLIKETLPSWFISAHAPEKDGG 1204

Query: 1211 EYGGMVPVLRGYALAFFSVLCGTFSWGIDSISSASKRRAKLLDAHLEFLASALDGKFSIG 1270
            E GG+V +L GYALA+F+VLCGTF+WG+DS S ASKRR K+L AHLEFLASALDGK S+G
Sbjct: 1205 EPGGVVAMLGGYALAYFAVLCGTFAWGVDSASPASKRRPKVLGAHLEFLASALDGKISLG 1264

Query: 1271 CDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLERLGKGLRQLNEEELALALLESGGLTA 1305
            CD ATWRAYV+GFVSL+V C  KW+L+VD+ VL+RL  GLRQ NEEELA+ALL  GG+ A
Sbjct: 1265 CDSATWRAYVTGFVSLMVACTQKWVLDVDVYVLKRLSNGLRQWNEEELAMALLGLGGVGA 1324

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g00030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MD33B_ARATH0.0e+0059.24Mediator of RNA polymerase II transcription subunit 33B OS=Arabidopsis thaliana ... [more]
MD33A_ARATH0.0e+0056.41Mediator of RNA polymerase II transcription subunit 33A OS=Arabidopsis thaliana ... [more]
BLAST of Cp4.1LG15g00030 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A061DRW3_THECC0.0e+0071.17Reduced epidermal fluorescence 4, putative isoform 1 OS=Theobroma cacao GN=TCM_0... [more]
F6HQ63_VITVI0.0e+0070.88Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0104g00390 PE=4 SV=... [more]
A0A067JPN7_JATCU0.0e+0069.28Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21970 PE=4 SV=1[more]
M5VJA7_PRUPE0.0e+0068.91Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000301mg PE=4 SV=1[more]
A0A0D2TEF0_GOSRA0.0e+0069.16Uncharacterized protein OS=Gossypium raimondii GN=B456_007G134500 PE=4 SV=1[more]
BLAST of Cp4.1LG15g00030 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G48110.10.0e+0059.24 reduced epidermal fluorescence 4[more]
AT3G23590.10.0e+0056.41 REF4-related 1[more]
BLAST of Cp4.1LG15g00030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659096980|ref|XP_008449381.1|0.0e+0089.52PREDICTED: mediator of RNA polymerase II transcription subunit 33B-like isoform ... [more]
gi|778716139|ref|XP_011657513.1|0.0e+0089.15PREDICTED: mediator of RNA polymerase II transcription subunit 33B isoform X1 [C... [more]
gi|659096982|ref|XP_008449382.1|0.0e+0089.40PREDICTED: mediator of RNA polymerase II transcription subunit 33A-like isoform ... [more]
gi|778716142|ref|XP_011657514.1|0.0e+0089.07PREDICTED: mediator of RNA polymerase II transcription subunit 33A isoform X2 [C... [more]
gi|590717753|ref|XP_007050679.1|0.0e+0071.17Reduced epidermal fluorescence 4, putative isoform 1 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:2000762 regulation of phenylpropanoid metabolic process
biological_process GO:0009698 phenylpropanoid metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0016592 mediator complex
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g00030.1Cp4.1LG15g00030.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33739FAMILY NOT NAMEDcoord: 4..1305
score:
NoneNo IPR availablePANTHERPTHR33739:SF4MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 33Bcoord: 4..1305
score:

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g00030CmaCh19G000090Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g00030CmoCh19G000090Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g00030Csa6G408230Cucumber (Chinese Long) v2cpecuB255
Cp4.1LG15g00030MELO3C014345Melon (DHL92) v3.5.1cpemeB234
Cp4.1LG15g00030CSPI06G21780Wild cucumber (PI 183967)cpecpiB255
Cp4.1LG15g00030MELO3C014345.2Melon (DHL92) v3.6.1cpemedB274
Cp4.1LG15g00030CsaV3_6G036860Cucumber (Chinese Long) v3cpecucB0320
Cp4.1LG15g00030CsGy6G021070Cucumber (Gy14) v2cgybcpeB753
Cp4.1LG15g00030Carg16816Silver-seed gourdcarcpeB1057
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG15g00030Cucumber (Chinese Long) v3cpecucB0315
Cp4.1LG15g00030Cucurbita pepo (Zucchini)cpecpeB273
Cp4.1LG15g00030Cucumber (Gy14) v1cgycpeB0505
Cp4.1LG15g00030Cucurbita maxima (Rimu)cmacpeB615
Cp4.1LG15g00030Cucurbita moschata (Rifu)cmocpeB564
Cp4.1LG15g00030Wild cucumber (PI 183967)cpecpiB250
Cp4.1LG15g00030Cucumber (Chinese Long) v2cpecuB248
Cp4.1LG15g00030Watermelon (Charleston Gray)cpewcgB240
Cp4.1LG15g00030Melon (DHL92) v3.5.1cpemeB235
Cp4.1LG15g00030Cucumber (Gy14) v2cgybcpeB749
Cp4.1LG15g00030Melon (DHL92) v3.6.1cpemedB276