Cp4.1LG14g10740 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG14g10740
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG14 : 8780020 .. 8781733 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATTGAATGGCCAGAGCTCGTGGGAGTAAAATTTTATGTTGCTGCTAAAATCATAGAAAGAGAGAATCCTTGTGTCAGAGCCCAAAAGATTCTAGCTTGTTGTTACGAAAAATCAGAGTTCGATCCTTCACGAGTTTGGGTTCGTATCAATATTAACGATGTCGTTGTTTTCGTACCTAAAGTTGGTTAAAAATTGCACACGAGTATAGTTGTGTAAGTTATATGTATCAATATAAAGAATATGAAATTACTAATAAGGTAGTATGTAACTACCACTTTAATTATTGAATTCTTCGGAAGCTATTAATAATGTATGCTAAACTTACTCTAGTACGTAATATTTCATATCGTCAATTTCGTATGCCATTTGAACTATGTTTAGTTATCCACTTCACTTTTATATTATTCCTAACATTAACTTTGATATGAAATTTATTTTATTTCAAGAACGTGATTTTAAAATAATGGAGTTTTATAACGACACTATTTTTCTGTTGAAACAGAGTCGTTACTATAAGCATGACATGATTGTTAGCTGCGGAAAAATTCCTTTAAAATATTTCAAAATGATATCATGGATTTACACGTTAAAAATAAAAACCTTAAATCAATCCAACACATATAAAAATGGGATTAAACAATGTATTTAAAAACTAGAAAATAAAATAGAGAAAACAGTAAAACAATGTCGTGATCTAATCTAAGGGCGATGAGATAAATAAAATGCAACTACCCTAATACAAGTTACATGGTCTTCAACGCGACGCCGATGTCATCCCACATCGATTGGAGAAATGAATGAGTGCTAGCGAGGACGTTGGGCCCTGAACGGGGTGGATTGTGACATCCCACATTGGTTGGGGAGGAGAACAAACACCTTTTTAAGGATGTGGAAACCTCTCCTCAGTAGACGTGTTATAAAGCTTTGAAGGGATTCCAAATAGGAAAGCCCAAAGAAGACAATATCAGCTAGCGGTGAGTTTGGACCGTTATAACCTTAAGAAAAAATAGACACTTTTCCAAAGTTATTGATAATATTGGATAAAAACATGAAGATAGACGTGGTTAAAAGGTTTTTGTATAACATTTGGTAAAAAAGACATGTTTTTGAAAGACGTGTGTGATGTAGCTTTGATTTTACGTAAGTTATGCTATGTTATAAAGTATGTCATGTAACGATTATGTTATGAGATTATATTATGATATTGATCTTGTATGAAGCATAAACTTCCATATGTCAAGTTATGAAAGATATGTAATATGTTCACTCGTATCCTATGAGACAATAGAATAGAAAGTCATGTATGTTAATTACGTTATTCATGTCCACATATAATGAGTACAGACACGTCACGTACATCGAGATACTTCTCCATTATGATGAGTGCGAACGTGTATATTACAATATCTATGTTTTGCCATGATATTATACGACTCCTTTCCTTCTATGGTTTTAGCAGTGTGATCATACACTAGCTGAAGGATAGACTTGGAGTGTACGTATAAGCTCGTCTGGTGGGTCCATGTGGTCGAGAATACAAAATAACAGTAGAGAGTAAGCCAAGCATTTTCTTATCACCTACCAAAGAAGCAATAAGATGTTGTGTCCTCCTTCTTCTGGTACGTTGTTCCGATCACGTACTCTTCTGATTTTTTTGAAGTTATTTCCAAATGCTATGACCGAGCGGTTTGAAAACTTTGAAGTTGTCGTA

mRNA sequence

AAAATTGAATGGCCAGAGCTCGTGGGAGTAAAATTTTATGTTGCTGCTAAAATCATAGAAAGAGAGAATCCTTGTGTCAGAGCCCAAAAGATTCTAGCTTGTTGTTACGAAAAATCAGAGTTCGATCCTTCACGAGTTTGGGTTCGTATCAATATTAACGATGTCGTTGTTTTCGTACCTAAATTATTTCCAAATGCTATGACCGAGCGGTTTGAAAACTTTGAAGTTGTCGTA

Coding sequence (CDS)

AAAATTGAATGGCCAGAGCTCGTGGGAGTAAAATTTTATGTTGCTGCTAAAATCATAGAAAGAGAGAATCCTTGTGTCAGAGCCCAAAAGATTCTAGCTTGTTGTTACGAAAAATCAGAGTTCGATCCTTCACGAGTTTGGGTTCGTATCAATATTAACGATGTCGTTGTTTTCGTACCTAAATTATTTCCAAATGCTATGACCGAGCGGTTTGAAAACTTTGAAGTTGTCGTA

Protein sequence

KIEWPELVGVKFYVAAKIIERENPCVRAQKILACCYEKSEFDPSRVWVRININDVVVFVPKLFPNAMTERFENFEVVV
Homology
[Close]
BLAST of Cp4.1LG14g10740 vs. TrEMBL
Match: A0A0A0L8E6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142910 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 5.2e-09
Identity = 35/62 (56.45%), Postives = 43/62 (69.35%), Query Frame = 1 

Query: 1  KIEWPELVGVKFYVAAKIIERENPCVRAQKILACCYEKSEFDPSRVWVRININDVVVFVP 60
          K EWPELV VK+ +AA IIE+ENP V A KIL+       FD +RVWV IN+ +VVV  P
Sbjct: 9  KTEWPELVFVKYSIAAAIIEKENPDVEAVKILSGTPRILNFDINRVWVDINVEEVVVKKP 68

Query: 61 KL 63
          K+
Sbjct: 69 KV 70

[Close]
BLAST of Cp4.1LG14g10740 vs. TrEMBL
Match: A0A0A0L9Z4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142410 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 7.5e-08
Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 1 

Query: 4  WPELVGVKFYVAAKIIERENPCVRAQKILACCYEKSEFDPSRVWVRININDVVVFVPKL 63
          WPELVGV F  AA+IIE ENP V+A KIL        +DP+RVWV  N  D VV +P++
Sbjct: 12 WPELVGVDFSAAARIIETENPNVKATKILIGSPVILNYDPTRVWVICNTEDKVVDIPRV 70

[Close]
BLAST of Cp4.1LG14g10740 vs. TrEMBL
Match: A0A0A0L785_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141900 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.3e-07
Identity = 34/62 (54.84%), Postives = 39/62 (62.90%), Query Frame = 1 

Query: 1  KIEWPELVGVKFYVAAKIIERENPCVRAQKILACCYEKSEFDPSRVWVRININDVVVFVP 60
          K  WPELV V F  AA+IIE+ENP V+A KIL        FD SRVWV  NI + VV VP
Sbjct: 9  KTRWPELVFVNFCTAARIIEKENPDVKAIKILVDSPRIQNFDISRVWVDCNIEERVVKVP 68

Query: 61 KL 63
           +
Sbjct: 69 SV 70

[Close]
BLAST of Cp4.1LG14g10740 vs. NCBI nr
Match: gi|700201764|gb|KGN56897.1| (hypothetical protein Csa_3G142910 [Cucumis sativus])

HSP 1 Score: 68.2 bits (165), Expect = 7.4e-09
Identity = 35/62 (56.45%), Postives = 43/62 (69.35%), Query Frame = 1 

Query: 1  KIEWPELVGVKFYVAAKIIERENPCVRAQKILACCYEKSEFDPSRVWVRININDVVVFVP 60
          K EWPELV VK+ +AA IIE+ENP V A KIL+       FD +RVWV IN+ +VVV  P
Sbjct: 9  KTEWPELVFVKYSIAAAIIEKENPDVEAVKILSGTPRILNFDINRVWVDINVEEVVVKKP 68

Query: 61 KL 63
          K+
Sbjct: 69 KV 70

[Close]
BLAST of Cp4.1LG14g10740 vs. NCBI nr
Match: gi|700201763|gb|KGN56896.1| (hypothetical protein Csa_3G142410 [Cucumis sativus])

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-07
Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 1 

Query: 4  WPELVGVKFYVAAKIIERENPCVRAQKILACCYEKSEFDPSRVWVRININDVVVFVPKL 63
          WPELVGV F  AA+IIE ENP V+A KIL        +DP+RVWV  N  D VV +P++
Sbjct: 12 WPELVGVDFSAAARIIETENPNVKATKILIGSPVILNYDPTRVWVICNTEDKVVDIPRV 70

[Close]
BLAST of Cp4.1LG14g10740 vs. NCBI nr
Match: gi|700201761|gb|KGN56894.1| (hypothetical protein Csa_3G141900 [Cucumis sativus])

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-07
Identity = 34/62 (54.84%), Postives = 39/62 (62.90%), Query Frame = 1 

Query: 1  KIEWPELVGVKFYVAAKIIERENPCVRAQKILACCYEKSEFDPSRVWVRININDVVVFVP 60
          K  WPELV V F  AA+IIE+ENP V+A KIL        FD SRVWV  NI + VV VP
Sbjct: 9  KTRWPELVFVNFCTAARIIEKENPDVKAIKILVDSPRIQNFDISRVWVDCNIEERVVKVP 68

Query: 61 KL 63
           +
Sbjct: 69 SV 70

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g10740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG14g10740 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8E6_CUCSA5.2e-0956.45Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142910 PE=4 SV=1[more]
A0A0A0L9Z4_CUCSA7.5e-0854.24Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142410 PE=4 SV=1[more]
A0A0A0L785_CUCSA1.3e-0754.84Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141900 PE=4 SV=1[more]
BLAST of Cp4.1LG14g10740 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG14g10740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201764|gb|KGN56897.1|7.4e-0956.45hypothetical protein Csa_3G142910 [Cucumis sativus][more]
gi|700201763|gb|KGN56896.1|1.1e-0754.24hypothetical protein Csa_3G142410 [Cucumis sativus][more]
gi|700201761|gb|KGN56894.1|1.8e-0754.84hypothetical protein Csa_3G141900 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009611response to wounding
Vocabulary: Molecular Function
TermDefinition
GO:0004867serine-type endopeptidase inhibitor activity
Vocabulary: INTERPRO
TermDefinition
IPR000864Prot_inh_pot1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009611 response to wounding
cellular_component GO:0005575 cellular_component
molecular_function GO:0004867 serine-type endopeptidase inhibitor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g10740.1Cp4.1LG14g10740.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000864Proteinase inhibitor I13, potato inhibitor IPRODOMPD002604coord: 3..62
score: 3.
IPR000864Proteinase inhibitor I13, potato inhibitor IPFAMPF00280potato_inhibitcoord: 1..61
score: 2.3
IPR000864Proteinase inhibitor I13, potato inhibitor IunknownSSF54654CI-2 family of serine protease inhibitorscoord: 1..61
score: 6.8
NoneNo IPR availableGENE3DG3DSA:3.30.10.10coord: 1..61
score: 2.7
NoneNo IPR availablePANTHERPTHR33091FAMILY NOT NAMEDcoord: 1..63
score: 2.0
NoneNo IPR availablePANTHERPTHR33091:SF14SUBFAMILY NOT NAMEDcoord: 1..63
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG14g10740CmoCh16G013120Cucurbita moschata (Rifu)cmocpeB308
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG14g10740Cucumber (Chinese Long) v3cpecucB0255
Cp4.1LG14g10740Cucumber (Chinese Long) v3cpecucB0282
Cp4.1LG14g10740Wax gourdcpewgoB0278
Cp4.1LG14g10740Wax gourdcpewgoB0303
Cp4.1LG14g10740Cucurbita pepo (Zucchini)cpecpeB241
Cp4.1LG14g10740Cucurbita pepo (Zucchini)cpecpeB244
Cp4.1LG14g10740Cucurbita pepo (Zucchini)cpecpeB252
Cp4.1LG14g10740Cucumber (Gy14) v1cgycpeB0036
Cp4.1LG14g10740Cucumber (Gy14) v1cgycpeB0845
Cp4.1LG14g10740Cucurbita maxima (Rimu)cmacpeB345
Cp4.1LG14g10740Cucurbita maxima (Rimu)cmacpeB815
Cp4.1LG14g10740Cucurbita maxima (Rimu)cmacpeB872
Cp4.1LG14g10740Cucurbita moschata (Rifu)cmocpeB091
Cp4.1LG14g10740Cucurbita moschata (Rifu)cmocpeB608
Cp4.1LG14g10740Cucurbita moschata (Rifu)cmocpeB769
Cp4.1LG14g10740Wild cucumber (PI 183967)cpecpiB215
Cp4.1LG14g10740Wild cucumber (PI 183967)cpecpiB230
Cp4.1LG14g10740Cucumber (Chinese Long) v2cpecuB212
Cp4.1LG14g10740Cucumber (Chinese Long) v2cpecuB228
Cp4.1LG14g10740Bottle gourd (USVL1VR-Ls)cpelsiB165
Cp4.1LG14g10740Bottle gourd (USVL1VR-Ls)cpelsiB183
Cp4.1LG14g10740Watermelon (Charleston Gray)cpewcgB193
Cp4.1LG14g10740Watermelon (Charleston Gray)cpewcgB201
Cp4.1LG14g10740Watermelon (97103) v1cpewmB202
Cp4.1LG14g10740Watermelon (97103) v1cpewmB230
Cp4.1LG14g10740Melon (DHL92) v3.5.1cpemeB184
Cp4.1LG14g10740Melon (DHL92) v3.5.1cpemeB206
Cp4.1LG14g10740Cucumber (Gy14) v2cgybcpeB325
Cp4.1LG14g10740Melon (DHL92) v3.6.1cpemedB231
Cp4.1LG14g10740Melon (DHL92) v3.6.1cpemedB249
Cp4.1LG14g10740Silver-seed gourdcarcpeB0223
Cp4.1LG14g10740Silver-seed gourdcarcpeB0559
Cp4.1LG14g10740Silver-seed gourdcarcpeB0601