Cp4.1LG14g10610 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG14g10610
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCellular retinaldehyde-binding/triple function, C-terminal
LocationCp4.1LG14 : 8811653 .. 8813998 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAAGACATAGGGGTAAAGTTGTAATTTGAGGAATTTTAACTGAGCGAAATTTATGAGGGGGGAGAGAGGTTGGATCTAGGGAGGGAAAGATGCTACCGAATATTCTTGTGTGACAAAAATCTTTGCCCCCACGTCCGCGCCATTCGCCTCTTCCGCCCAATGATCTGGAGTCCCTTTTAATCCTCTCCCGATCATCTTTATTTCTTCGTTTATTTTCCAAATCTCATCCTCCAATTCCGTTCTCCACCAAAATCCCTTCACTCCCTCCTTATCCCTAACCATTCTCTCAACGCTACTCGCTTTTTCCTTCTGATTCTACTTGGAATTCGTCTCATATGGCCGCTCAGGTTCAGCCTCCTCCGCCGGAGCAAAACCAACTCGAAAACCTCGATGTCTTCAAGATTAAAGGCAGAGACAAACAAGGCCGCCGGATTCTCCGCATTACCGGAAAATTCTTTCCAGGTTTCCTCTCTCTCTCTCTCATTCCTTATCGATGAAATTAATTTTTTGTCGTTTCTTTTGACCATTGAGTTTGAATGTGCTCAAGAAACATCTGTATGTTTGCCTTACCATGATCTGTTTCTGTTTTCTTGCTTTTTTCATGGATGAAATTAAATTTTTCTCGTTGTCATCCGCGCGAACTGTACATTTGAATGTGCTCAAGAAGCATCTGGAATTTTCCGTAATCTGCTCTGATTTGATTTTCTTGCTCTGGTCTGCTTTTATCTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTATCAAATTGAATTTTCGCAGAGAAGCGTATGTAGATTTGCCTTACTACGCTCTGATTCGGTTTTCTTGCTCTGTTCTGTTTCTGTGTTCTTGTTCTTGACTATGCTTAAGAAGTATCTGCATATCTGCACTGCTGTGCTCTGATTAAATTTCTAGCTATTTTGAGCGATGAGATTGATGTTTTCTTTTTTTGAAAATCAGCACGGATTGTGAGTTTGGATGTGGTGAAGAAGCATCTGGAGGAGAAGATCTTACCTAGGCTTAAGAACAAGCGTTTTACGATCTTGTACTTTCACACCGACGTTCAAAGGAGCCAAAATTTCCCCGGAATCGCCGCCCTCCGATCAATCTATGAAGCGATTCCGGCCACCGTCAAGGCTAATCTCGAGGCCGTGTACTTCGTTCATCCAGACCTCCAGGCCAGGCTCTTCCTCGCCACACTCGGCCGCATTTTCTTCACTAGCGAGTATATTTTCTAACCCTTCTTCTTCAATCAATTTCAGGTTTTCGCTATATCTTATTCCCAATATTTTCTTTTTGCATCATAGAAAATAATGTAATTTTTATGAATACGTAAATTAAAACATTTTAAAATATATTCTTTTTAAAAAAAAAAAAATATGTAATTGTATTTTTAAAATTTATAAATGTATTAGAAATAAAATTGAAAAGTTTAATTAAATATTTACATTTTTTTTAATGCACTCAAAGACATTATTTTATACACCTTACCCAATAAAGGGACAATGTTAAAAAAAAGAAAATTAAAATATTAAAAAGGAAAAGTAGGAATAATTTTATGATGGTTTGTTGATAGTATTATGTTATAGTTTATAATGAGAGGGAATGTTTGGATGTGGTAGGATGTATGGGAAGATAAAGTACGTGAGTAGAATTGATCTGCTGTGGGAGCACGTACGGAGGAACGAGATCGAGGTTCCAGAGTTCATTTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGTCTGGAGAGTGACCATCCTAGGGTTTACGGTGCACCCTCAATTGATTCGCACGTGTACTCGATGAGGTGCATTTCCTAGATTCCTTTCTTCTTTGTTTTAAAGAAAGGGGGGCCTTTGTTTAAATGAGTCTGTGTTTGGATCTTTGCTTAGCCCACATTCTTTTTTCATTTTGGATGCCCAAGACCAAGACATGCTTGTTTATATTTCCTTTTTTTTCTTTTTTTTTTTCTCTTGAAAAATGTGGTTGTATTAGAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAACCTTGGTGCTTACTGTATATATTCCTTTTTTAATCCACATTTTTAATTTAAAGCCTATAATAAAAGTTTGCATAATTGGATCCAACCGAGTTAGATTGGTTTCAAGATCTACGTTCAAAAGGCAAAACAAATTTATGTACACAACTTATAAATGCAGGATAATAAATTTGCAATGGTTCCTAGTTTAAGATACGCTTTTAATGACCATTTAGTTCCTATGGAGCGTTACCAAGACGCTCTTAAAAGGA

mRNA sequence

AGAAAGACATAGGGGTAAAGTTGTAATTTGAGGAATTTTAACTGAGCGAAATTTATGAGGGGGGAGAGAGGTTGGATCTAGGGAGGGAAAGATGCTACCGAATATTCTTGTGTGACAAAAATCTTTGCCCCCACGTCCGCGCCATTCGCCTCTTCCGCCCAATGATCTGGAGTCCCTTTTAATCCTCTCCCGATCATCTTTATTTCTTCGTTTATTTTCCAAATCTCATCCTCCAATTCCGTTCTCCACCAAAATCCCTTCACTCCCTCCTTATCCCTAACCATTCTCTCAACGCTACTCGCTTTTTCCTTCTGATTCTACTTGGAATTCGTCTCATATGGCCGCTCAGGTTCAGCCTCCTCCGCCGGAGCAAAACCAACTCGAAAACCTCGATGTCTTCAAGATTAAAGGCAGAGACAAACAAGGCCGCCGGATTCTCCGCATTACCGGAAAATTCTTTCCAGCACGGATTGTGAGTTTGGATGTGGTGAAGAAGCATCTGGAGGAGAAGATCTTACCTAGGCTTAAGAACAAGCGTTTTACGATCTTGTACTTTCACACCGACGTTCAAAGGAGCCAAAATTTCCCCGGAATCGCCGCCCTCCGATCAATCTATGAAGCGATTCCGGCCACCGTCAAGGCTAATCTCGAGGCCGTGTACTTCGTTCATCCAGACCTCCAGGCCAGGCTCTTCCTCGCCACACTCGGCCGCATTTTCTTCACTAGCGAGATGTATGGGAAGATAAAGTACGTGAGTAGAATTGATCTGCTGTGGGAGCACGTACGGAGGAACGAGATCGAGGTTCCAGAGTTCATTTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGTCTGGAGAGTGACCATCCTAGGGTTTACGGTGCACCCTCAATTGATTCGCACGTGTACTCGATGAGGTGCATTTCCTAGATTCCTTTCTTCTTTGTTTTAAAGAAAGGGGGGCCTTTGTTTAAATGAGTCTGTGTTTGGATCTTTGCTTAGCCCACATTCTTTTTTCATTTTGGATGCCCAAGACCAAGACATGCTTGTTTATATTTCCTTTTTTTTCTTTTTTTTTTTCTCTTGAAAAATGTGGTTGTATTAGAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAACCTTGGTGCTTACTGTATATATTCCTTTTTTAATCCACATTTTTAATTTAAAGCCTATAATAAAAGTTTGCATAATTGGATCCAACCGAGTTAGATTGGTTTCAAGATCTACGTTCAAAAGGCAAAACAAATTTATGTACACAACTTATAAATGCAGGATAATAAATTTGCAATGGTTCCTAGTTTAAGATACGCTTTTAATGACCATTTAGTTCCTATGGAGCGTTACCAAGACGCTCTTAAAAGGA

Coding sequence (CDS)

ATGGCCGCTCAGGTTCAGCCTCCTCCGCCGGAGCAAAACCAACTCGAAAACCTCGATGTCTTCAAGATTAAAGGCAGAGACAAACAAGGCCGCCGGATTCTCCGCATTACCGGAAAATTCTTTCCAGCACGGATTGTGAGTTTGGATGTGGTGAAGAAGCATCTGGAGGAGAAGATCTTACCTAGGCTTAAGAACAAGCGTTTTACGATCTTGTACTTTCACACCGACGTTCAAAGGAGCCAAAATTTCCCCGGAATCGCCGCCCTCCGATCAATCTATGAAGCGATTCCGGCCACCGTCAAGGCTAATCTCGAGGCCGTGTACTTCGTTCATCCAGACCTCCAGGCCAGGCTCTTCCTCGCCACACTCGGCCGCATTTTCTTCACTAGCGAGATGTATGGGAAGATAAAGTACGTGAGTAGAATTGATCTGCTGTGGGAGCACGTACGGAGGAACGAGATCGAGGTTCCAGAGTTCATTTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGTCTGGAGAGTGACCATCCTAGGGTTTACGGTGCACCCTCAATTGATTCGCACGTGTACTCGATGAGGTGCATTTCCTAG

Protein sequence

MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKILPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFLATLGRIFFTSEMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSIDSHVYSMRCIS
Homology
[Close]
BLAST of Cp4.1LG14g10610 vs. Swiss-Prot
Match: GDAP2_XENTR (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.5e-10
Identity = 38/143 (26.57%), Postives = 73/143 (51.05%), Query Frame = 1 

Query: 25  GRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKILPRLKNKRFTILYFHTDVQRSQNFP 84
           G D  GR ++ + G+  P  ++ ++    +    ++  +  K + ++YFHT +    N P
Sbjct: 343 GVDNCGRTVMVVVGRNIPVLLIDMEKALLYFIH-MMDHVAAKEYVLVYFHT-LTGEHNHP 402

Query: 85  GIAALRSIYEAIPATVKANLEAVYFVHPDLQARL---FLATLGRIFFTSEMYGKIKYVSR 144
               L+++Y+ +    K NL+A+YFVHP  ++++   F  T    F  S +  K+  V  
Sbjct: 403 DSDFLKNMYDIVDVKYKKNLKALYFVHPTFRSKVSSWFFTT----FTVSGLKDKVHQVES 462

Query: 145 IDLLWEHVRRNEIEVPEFIYDHD 165
           +  L+  V   +IE+P F+ D+D
Sbjct: 463 LHQLFSAVPPEQIEIPPFVLDYD 479

[Close]
BLAST of Cp4.1LG14g10610 vs. Swiss-Prot
Match: GDAP2_BOVIN (Ganglioside-induced differentiation-associated protein 2 OS=Bos taurus GN=GDAP2 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-09
Identity = 37/143 (25.87%), Postives = 71/143 (49.65%), Query Frame = 1 

Query: 25  GRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKILPRLKNKRFTILYFHTDVQRSQNFP 84
           G D  GR ++ + G+  P  ++ +D    +    ++  +  K + ++YFHT +    N  
Sbjct: 344 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHL 403

Query: 85  GIAALRSIYEAIPATVKANLEAVYFVHPDLQARL---FLATLGRIFFTSEMYGKIKYVSR 144
               L+ +Y+ +    K NL+AVYFVHP  ++++   F  T    F  S +  KI +V  
Sbjct: 404 DSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTT----FSVSGLKDKIHHVDS 463

Query: 145 IDLLWEHVRRNEIEVPEFIYDHD 165
           +  L+  +   +I+ P F+ ++D
Sbjct: 464 LHQLFSAISPEQIDFPPFVLEYD 480

[Close]
BLAST of Cp4.1LG14g10610 vs. Swiss-Prot
Match: GDAP2_HUMAN (Ganglioside-induced differentiation-associated protein 2 OS=Homo sapiens GN=GDAP2 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-09
Identity = 37/143 (25.87%), Postives = 71/143 (49.65%), Query Frame = 1 

Query: 25  GRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKILPRLKNKRFTILYFHTDVQRSQNFP 84
           G D  GR ++ + G+  P  ++ +D    +    ++  +  K + ++YFHT +    N  
Sbjct: 344 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHL 403

Query: 85  GIAALRSIYEAIPATVKANLEAVYFVHPDLQARL---FLATLGRIFFTSEMYGKIKYVSR 144
               L+ +Y+ +    K NL+AVYFVHP  ++++   F  T    F  S +  KI +V  
Sbjct: 404 DSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTT----FSVSGLKDKIHHVDS 463

Query: 145 IDLLWEHVRRNEIEVPEFIYDHD 165
           +  L+  +   +I+ P F+ ++D
Sbjct: 464 LHQLFSAISPEQIDFPPFVLEYD 480

[Close]
BLAST of Cp4.1LG14g10610 vs. Swiss-Prot
Match: GDAP2_MACFA (Ganglioside-induced differentiation-associated protein 2 OS=Macaca fascicularis GN=GDAP2 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-09
Identity = 37/143 (25.87%), Postives = 71/143 (49.65%), Query Frame = 1 

Query: 25  GRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKILPRLKNKRFTILYFHTDVQRSQNFP 84
           G D  GR ++ + G+  P  ++ +D    +    ++  +  K + ++YFHT +    N  
Sbjct: 308 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHL 367

Query: 85  GIAALRSIYEAIPATVKANLEAVYFVHPDLQARL---FLATLGRIFFTSEMYGKIKYVSR 144
               L+ +Y+ +    K NL+AVYFVHP  ++++   F  T    F  S +  KI +V  
Sbjct: 368 DSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTT----FSVSGLKDKIHHVDS 427

Query: 145 IDLLWEHVRRNEIEVPEFIYDHD 165
           +  L+  +   +I+ P F+ ++D
Sbjct: 428 LHQLFSAISPEQIDFPPFVLEYD 444

[Close]
BLAST of Cp4.1LG14g10610 vs. Swiss-Prot
Match: GDAP2_MOUSE (Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus GN=Gdap2 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-09
Identity = 37/143 (25.87%), Postives = 71/143 (49.65%), Query Frame = 1 

Query: 25  GRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKILPRLKNKRFTILYFHTDVQRSQNFP 84
           G D  GR ++ + G+  P  ++ +D    +    ++  +  K + ++YFHT +    N  
Sbjct: 345 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSDYNHL 404

Query: 85  GIAALRSIYEAIPATVKANLEAVYFVHPDLQARL---FLATLGRIFFTSEMYGKIKYVSR 144
               L+ +Y+ +    K NL+AVYFVHP  ++++   F  T    F  S +  KI +V  
Sbjct: 405 DSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTT----FSVSGLKDKIHHVDS 464

Query: 145 IDLLWEHVRRNEIEVPEFIYDHD 165
           +  L+  +   +I+ P F+ ++D
Sbjct: 465 LQQLFSAISPEQIDFPPFVLEYD 481

[Close]
BLAST of Cp4.1LG14g10610 vs. TrEMBL
Match: A0A0A0L0Z7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002450 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 1.4e-103
Identity = 185/201 (92.04%), Postives = 194/201 (96.52%), Query Frame = 1 

Query: 1   MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIL 60
           MAA + PPPPEQN LE LDVFKIKGRDKQGRRILRITGKFFPAR+VSLDV+KKHLEEKI 
Sbjct: 1   MAAHLPPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFL 120
           PRLKNKRFTILYFHT VQRSQNFPGIAALRSIY+AIPA VKANLEAVYFVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSE+YGK++YVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSIDSHVYSMRCIS 202
           HPRVYGAPS++SHVYSMRCIS
Sbjct: 181 HPRVYGAPSVESHVYSMRCIS 201

[Close]
BLAST of Cp4.1LG14g10610 vs. TrEMBL
Match: D7TV30_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0338g00030 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.4e-79
Identity = 144/199 (72.36%), Postives = 174/199 (87.44%), Query Frame = 1 

Query: 6   QPPPPEQNQL-ENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKILPRLK 65
           Q  P EQ QL E L++FKI+GRDK+GR+ILRI GK+FPAR +S+DVVKK+LE+KI P+L 
Sbjct: 4   QASPSEQEQLVEKLEIFKIRGRDKRGRKILRIIGKYFPARTLSVDVVKKYLEDKIFPKLG 63

Query: 66  NKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFLATLG 125
            K+F++LY HTDV+RS+NFPGI+ALRSIYEAIP  VK NLEAVYFVHP LQ+RLFLAT G
Sbjct: 64  KKQFSVLYVHTDVERSENFPGISALRSIYEAIPVNVKENLEAVYFVHPGLQSRLFLATFG 123

Query: 126 RIFFTSEMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRV 185
           R+     +YGK++YV+R+DLLWEHVRRNEIE+P+F+YDHDE+LEYRPMMDYGLESDHPRV
Sbjct: 124 RLLLGGGLYGKLRYVNRLDLLWEHVRRNEIEIPDFVYDHDEELEYRPMMDYGLESDHPRV 183

Query: 186 YGAPSIDSHV--YSMRCIS 202
           YGAP++DS V  YSMRCIS
Sbjct: 184 YGAPAVDSPVSMYSMRCIS 202

[Close]
BLAST of Cp4.1LG14g10610 vs. TrEMBL
Match: A0A061DL92_THECC (G-box binding factor 3, putative isoform 1 OS=Theobroma cacao GN=TCM_000112 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.3e-77
Identity = 139/203 (68.47%), Postives = 174/203 (85.71%), Query Frame = 1 

Query: 1   MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIL 60
           M++Q+     EQ  ++ LD+FKI G+DK+GR+ILR+TGKFFPAR +S++V+KK+LEE I 
Sbjct: 1   MSSQISESDQEQ-LIQKLDIFKIHGKDKRGRKILRVTGKFFPARFLSVEVLKKYLEENIF 60

Query: 61  PRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFL 120
           PRL  K F++LY HT VQRS+NFPGI+ALRSIY+AIP  VK NL+AVYF+HP LQARLFL
Sbjct: 61  PRLGKKPFSVLYVHTGVQRSENFPGISALRSIYDAIPVNVKDNLQAVYFLHPGLQARLFL 120

Query: 121 ATLGRIFFTSEMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           AT GR+ F+  +YGK++YV+R+D +WEHVRRNEIE+P+F+YDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATFGRLLFSGGLYGKLRYVNRLDYVWEHVRRNEIEIPDFVYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSIDSHV--YSMRCIS 202
           HPRVYGAP++DS V  YSMRCIS
Sbjct: 181 HPRVYGAPAVDSPVSMYSMRCIS 202

[Close]
BLAST of Cp4.1LG14g10610 vs. TrEMBL
Match: A0A0S3T476_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G146800 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.9e-76
Identity = 135/194 (69.59%), Postives = 169/194 (87.11%), Query Frame = 1 

Query: 11  EQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKILPRLKNKRFTI 70
           ++  LE L+VFKIKGRDK GR+ILRI GKFFPAR+++++V+K++LEE++ P+L  ++F +
Sbjct: 10  QEELLEKLEVFKIKGRDKHGRKILRIIGKFFPARLITVEVLKRYLEERVFPKLGKRKFAV 69

Query: 71  LYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFLATLGRIFFTS 130
           LY HTDVQRS+N PGI+ALRSIY+AIPA VK NLEA YF+HP LQARLFLATLGR  F +
Sbjct: 70  LYVHTDVQRSENLPGISALRSIYDAIPANVKENLEAFYFIHPGLQARLFLATLGRFLFNA 129

Query: 131 EMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVY-GAPS 190
            +YGK+KY+SR+D LWEHV+RNE+E+PEF++DHDEDLEYRPMMDYGLESDH RVY GAP+
Sbjct: 130 GLYGKLKYISRVDFLWEHVKRNEVEIPEFVFDHDEDLEYRPMMDYGLESDHARVYGGAPT 189

Query: 191 IDSHV--YSMRCIS 202
           +DS V  YSMRCIS
Sbjct: 190 MDSPVTTYSMRCIS 203

[Close]
BLAST of Cp4.1LG14g10610 vs. TrEMBL
Match: A0A0L9UQU4_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g057100 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.9e-76
Identity = 135/194 (69.59%), Postives = 169/194 (87.11%), Query Frame = 1 

Query: 11  EQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKILPRLKNKRFTI 70
           ++  LE L+VFKIKGRDK GR+ILRI GKFFPAR+++++V+K++LEE++ P+L  ++F +
Sbjct: 10  QEELLEKLEVFKIKGRDKHGRKILRIIGKFFPARLITVEVLKRYLEERVFPKLGKRKFAV 69

Query: 71  LYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFLATLGRIFFTS 130
           LY HTDVQRS+N PGI+ALRSIY+AIPA VK NLEA YF+HP LQARLFLATLGR  F +
Sbjct: 70  LYVHTDVQRSENLPGISALRSIYDAIPANVKENLEAFYFIHPGLQARLFLATLGRFLFNA 129

Query: 131 EMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVY-GAPS 190
            +YGK+KY+SR+D LWEHV+RNE+E+PEF++DHDEDLEYRPMMDYGLESDH RVY GAP+
Sbjct: 130 GLYGKLKYISRVDFLWEHVKRNEVEIPEFVFDHDEDLEYRPMMDYGLESDHARVYGGAPT 189

Query: 191 IDSHV--YSMRCIS 202
           +DS V  YSMRCIS
Sbjct: 190 MDSPVTTYSMRCIS 203

[Close]
BLAST of Cp4.1LG14g10610 vs. TAIR10
Match: AT4G35750.1 (AT4G35750.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein)

HSP 1 Score: 280.8 bits (717), Expect = 6.6e-76
Identity = 133/194 (68.56%), Postives = 162/194 (83.51%), Query Frame = 1 

Query: 11  EQNQL-ENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKILPRLKNKRFT 70
           EQ QL E L++FKI GRDK+GR+ILRI GKFFPAR +SLDV+KK+LEEKI PRL  K F 
Sbjct: 9   EQEQLIEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIFPRLGRKPFA 68

Query: 71  ILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFLATLGRIFFT 130
           +LY HT VQRS+NFPGI+ALR+IY+AIP  V+ NL+ VYF+HP LQ+RLFLAT GR  F+
Sbjct: 69  VLYVHTGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFLATCGRFLFS 128

Query: 131 SEMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPS 190
             +YGK++Y+SR+D LWEHVRRNEIE+PEF+YDHD+DLEYRPMMDYG ESDH RV+   +
Sbjct: 129 GGLYGKLRYISRVDYLWEHVRRNEIEMPEFVYDHDDDLEYRPMMDYGQESDHARVFAGAA 188

Query: 191 IDSHV--YSMRCIS 202
           +DS V  +SMRCIS
Sbjct: 189 VDSSVSSFSMRCIS 202

[Close]
BLAST of Cp4.1LG14g10610 vs. TAIR10
Match: AT3G10210.1 (AT3G10210.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein)

HSP 1 Score: 174.9 bits (442), Expect = 5.1e-44
Identity = 77/168 (45.83%), Postives = 117/168 (69.64%), Query Frame = 1 

Query: 13  NQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKILPRLKNKRFTILY 72
           + L+ L  F ++G D+ G RI RI GK+FPAR+VS + +KK++ +KI  +       ++Y
Sbjct: 47  SDLDLLQFFTLQGLDRSGNRIFRIVGKYFPARVVSAERLKKYISQKISNQCPEGPLCLVY 106

Query: 73  FHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFLATLGRIFFTSEM 132
            H+ VQ+  N PGI  LR IYE +P+ +K  L+ VYF+HP L++RL +ATLGR+  +  +
Sbjct: 107 MHSTVQKDDNSPGITILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIATLGRLLLSGGL 166

Query: 133 YGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 181
           Y KIKYVSR+  LWE +++ E+E+P+F+ +HD  LE+RP+ DYG+E D
Sbjct: 167 YWKIKYVSRLQYLWEDIKKGEVEIPDFVKNHDNVLEHRPLTDYGIEPD 214

[Close]
BLAST of Cp4.1LG14g10610 vs. NCBI nr
Match: gi|449456859|ref|XP_004146166.1| (PREDICTED: ganglioside-induced differentiation-associated protein 2 [Cucumis sativus])

HSP 1 Score: 383.6 bits (984), Expect = 2.1e-103
Identity = 185/201 (92.04%), Postives = 194/201 (96.52%), Query Frame = 1 

Query: 1   MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIL 60
           MAA + PPPPEQN LE LDVFKIKGRDKQGRRILRITGKFFPAR+VSLDV+KKHLEEKI 
Sbjct: 1   MAAHLPPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFL 120
           PRLKNKRFTILYFHT VQRSQNFPGIAALRSIY+AIPA VKANLEAVYFVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSE+YGK++YVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSIDSHVYSMRCIS 202
           HPRVYGAPS++SHVYSMRCIS
Sbjct: 181 HPRVYGAPSVESHVYSMRCIS 201

[Close]
BLAST of Cp4.1LG14g10610 vs. NCBI nr
Match: gi|659095283|ref|XP_008448498.1| (PREDICTED: rho GTPase-activating protein 8 [Cucumis melo])

HSP 1 Score: 381.7 bits (979), Expect = 7.8e-103
Identity = 184/201 (91.54%), Postives = 194/201 (96.52%), Query Frame = 1 

Query: 1   MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIL 60
           MAA + PPPPEQN LE LDVFKIKGRDKQGRRILRITGKFFPAR+VSLDV+KKHLEEKI 
Sbjct: 1   MAALLHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFL 120
           PRLKNKRFTILYFH+ VQRSQNFPGIAALRSIY+AIPA VKANLEAVYFVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHSGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSE+YGK++YVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSIDSHVYSMRCIS 202
           HPRVYGAPS++SHVYSMRCIS
Sbjct: 181 HPRVYGAPSVESHVYSMRCIS 201

[Close]
BLAST of Cp4.1LG14g10610 vs. NCBI nr
Match: gi|731439678|ref|XP_010646839.1| (PREDICTED: ganglioside-induced differentiation-associated protein 2 [Vitis vinifera])

HSP 1 Score: 303.9 bits (777), Expect = 2.1e-79
Identity = 144/199 (72.36%), Postives = 174/199 (87.44%), Query Frame = 1 

Query: 6   QPPPPEQNQL-ENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKILPRLK 65
           Q  P EQ QL E L++FKI+GRDK+GR+ILRI GK+FPAR +S+DVVKK+LE+KI P+L 
Sbjct: 4   QASPSEQEQLVEKLEIFKIRGRDKRGRKILRIIGKYFPARTLSVDVVKKYLEDKIFPKLG 63

Query: 66  NKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFLATLG 125
            K+F++LY HTDV+RS+NFPGI+ALRSIYEAIP  VK NLEAVYFVHP LQ+RLFLAT G
Sbjct: 64  KKQFSVLYVHTDVERSENFPGISALRSIYEAIPVNVKENLEAVYFVHPGLQSRLFLATFG 123

Query: 126 RIFFTSEMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRV 185
           R+     +YGK++YV+R+DLLWEHVRRNEIE+P+F+YDHDE+LEYRPMMDYGLESDHPRV
Sbjct: 124 RLLLGGGLYGKLRYVNRLDLLWEHVRRNEIEIPDFVYDHDEELEYRPMMDYGLESDHPRV 183

Query: 186 YGAPSIDSHV--YSMRCIS 202
           YGAP++DS V  YSMRCIS
Sbjct: 184 YGAPAVDSPVSMYSMRCIS 202

[Close]
BLAST of Cp4.1LG14g10610 vs. NCBI nr
Match: gi|720035115|ref|XP_010266934.1| (PREDICTED: protein GDAP2 homolog [Nelumbo nucifera])

HSP 1 Score: 298.5 bits (763), Expect = 8.7e-78
Identity = 139/196 (70.92%), Postives = 171/196 (87.24%), Query Frame = 1 

Query: 9   PPEQNQ-LENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKILPRLKNKR 68
           PPEQ Q ++ L++FKI+GRDK+GR++LRI GKFFPARIVS +V+ K+LEEKI P+L  + 
Sbjct: 7   PPEQEQFIDKLEIFKIQGRDKRGRKVLRIIGKFFPARIVSAEVLNKYLEEKIFPQLGERP 66

Query: 69  FTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFLATLGRIF 128
           F+++Y HT+VQRS+NFPGI+ LRSIYEA+P  VK NLEAVYFVHP LQ+RLFLAT GR  
Sbjct: 67  FSVVYVHTNVQRSENFPGISTLRSIYEALPINVKENLEAVYFVHPGLQSRLFLATFGRFL 126

Query: 129 FTSEMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGA 188
           F+  +YGK+KYVSR++ LWEHVRRNEIE+P+F+YDHDE+LEYRPMMDYGLESDHPRVYGA
Sbjct: 127 FSGGLYGKLKYVSRLEFLWEHVRRNEIEIPDFVYDHDEELEYRPMMDYGLESDHPRVYGA 186

Query: 189 PSIDSHV--YSMRCIS 202
           P++DS V  YSMRCIS
Sbjct: 187 PTVDSPVSMYSMRCIS 202

[Close]
BLAST of Cp4.1LG14g10610 vs. NCBI nr
Match: gi|590702210|ref|XP_007046566.1| (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 297.4 bits (760), Expect = 1.9e-77
Identity = 139/203 (68.47%), Postives = 174/203 (85.71%), Query Frame = 1 

Query: 1   MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIL 60
           M++Q+     EQ  ++ LD+FKI G+DK+GR+ILR+TGKFFPAR +S++V+KK+LEE I 
Sbjct: 1   MSSQISESDQEQ-LIQKLDIFKIHGKDKRGRKILRVTGKFFPARFLSVEVLKKYLEENIF 60

Query: 61  PRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFL 120
           PRL  K F++LY HT VQRS+NFPGI+ALRSIY+AIP  VK NL+AVYF+HP LQARLFL
Sbjct: 61  PRLGKKPFSVLYVHTGVQRSENFPGISALRSIYDAIPVNVKDNLQAVYFLHPGLQARLFL 120

Query: 121 ATLGRIFFTSEMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           AT GR+ F+  +YGK++YV+R+D +WEHVRRNEIE+P+F+YDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATFGRLLFSGGLYGKLRYVNRLDYVWEHVRRNEIEIPDFVYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSIDSHV--YSMRCIS 202
           HPRVYGAP++DS V  YSMRCIS
Sbjct: 181 HPRVYGAPAVDSPVSMYSMRCIS 202

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g10610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GDAP2_XENTR4.5e-1026.57Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis P... [more]
GDAP2_BOVIN2.3e-0925.87Ganglioside-induced differentiation-associated protein 2 OS=Bos taurus GN=GDAP2 ... [more]
GDAP2_HUMAN2.3e-0925.87Ganglioside-induced differentiation-associated protein 2 OS=Homo sapiens GN=GDAP... [more]
GDAP2_MACFA2.3e-0925.87Ganglioside-induced differentiation-associated protein 2 OS=Macaca fascicularis ... [more]
GDAP2_MOUSE2.3e-0925.87Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus GN=Gdap... [more]
BLAST of Cp4.1LG14g10610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0Z7_CUCSA1.4e-10392.04Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002450 PE=4 SV=1[more]
D7TV30_VITVI1.4e-7972.36Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0338g00030 PE=4 SV=... [more]
A0A061DL92_THECC1.3e-7768.47G-box binding factor 3, putative isoform 1 OS=Theobroma cacao GN=TCM_000112 PE=4... [more]
A0A0S3T476_PHAAN1.9e-7669.59Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G146800 PE=... [more]
A0A0L9UQU4_PHAAN1.9e-7669.59Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g057100 PE=4 SV=1[more]
BLAST of Cp4.1LG14g10610 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G35750.16.6e-7668.56 SEC14 cytosolic factor family protein / phosphoglyceride transfer fa... [more]
AT3G10210.15.1e-4445.83 SEC14 cytosolic factor family protein / phosphoglyceride transfer fa... [more]
BLAST of Cp4.1LG14g10610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449456859|ref|XP_004146166.1|2.1e-10392.04PREDICTED: ganglioside-induced differentiation-associated protein 2 [Cucumis sat... [more]
gi|659095283|ref|XP_008448498.1|7.8e-10391.54PREDICTED: rho GTPase-activating protein 8 [Cucumis melo][more]
gi|731439678|ref|XP_010646839.1|2.1e-7972.36PREDICTED: ganglioside-induced differentiation-associated protein 2 [Vitis vinif... [more]
gi|720035115|ref|XP_010266934.1|8.7e-7870.92PREDICTED: protein GDAP2 homolog [Nelumbo nucifera][more]
gi|590702210|ref|XP_007046566.1|1.9e-7768.47SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001251CRAL-TRIO_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g10610.1Cp4.1LG14g10610.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001251CRAL-TRIO lipid binding domainPFAMPF13716CRAL_TRIO_2coord: 30..165
score: 5.0
IPR001251CRAL-TRIO lipid binding domainSMARTSM00516sec14_4coord: 14..163
score: 2.6
IPR001251CRAL-TRIO lipid binding domainunknownSSF52087CRAL/TRIO domaincoord: 20..154
score: 7.9
NoneNo IPR availablePANTHERPTHR11106GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATEDcoord: 10..201
score: 1.0E
NoneNo IPR availablePANTHERPTHR11106:SF58SUBFAMILY NOT NAMEDcoord: 10..201
score: 1.0E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG14g10610CmaCh16G012700Cucurbita maxima (Rimu)cmacpeB345
Cp4.1LG14g10610CmoCh16G013190Cucurbita moschata (Rifu)cmocpeB308
Cp4.1LG14g10610Bhi11G000238Wax gourdcpewgoB0273
Cp4.1LG14g10610Carg19443Silver-seed gourdcarcpeB0601
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG14g10610Melon (DHL92) v3.6.1cpemedB231
Cp4.1LG14g10610Melon (DHL92) v3.6.1cpemedB249
Cp4.1LG14g10610Silver-seed gourdcarcpeB0223
Cp4.1LG14g10610Silver-seed gourdcarcpeB0559
Cp4.1LG14g10610Cucumber (Chinese Long) v3cpecucB0255
Cp4.1LG14g10610Cucumber (Chinese Long) v3cpecucB0282
Cp4.1LG14g10610Wax gourdcpewgoB0278
Cp4.1LG14g10610Wax gourdcpewgoB0303
Cp4.1LG14g10610Cucurbita pepo (Zucchini)cpecpeB241
Cp4.1LG14g10610Cucurbita pepo (Zucchini)cpecpeB244
Cp4.1LG14g10610Cucurbita pepo (Zucchini)cpecpeB252
Cp4.1LG14g10610Cucumber (Gy14) v1cgycpeB0036
Cp4.1LG14g10610Cucumber (Gy14) v1cgycpeB0845
Cp4.1LG14g10610Cucurbita maxima (Rimu)cmacpeB815
Cp4.1LG14g10610Cucurbita maxima (Rimu)cmacpeB872
Cp4.1LG14g10610Cucurbita moschata (Rifu)cmocpeB091
Cp4.1LG14g10610Cucurbita moschata (Rifu)cmocpeB608
Cp4.1LG14g10610Cucurbita moschata (Rifu)cmocpeB769
Cp4.1LG14g10610Wild cucumber (PI 183967)cpecpiB215
Cp4.1LG14g10610Wild cucumber (PI 183967)cpecpiB230
Cp4.1LG14g10610Cucumber (Chinese Long) v2cpecuB212
Cp4.1LG14g10610Cucumber (Chinese Long) v2cpecuB228
Cp4.1LG14g10610Bottle gourd (USVL1VR-Ls)cpelsiB165
Cp4.1LG14g10610Bottle gourd (USVL1VR-Ls)cpelsiB183
Cp4.1LG14g10610Watermelon (Charleston Gray)cpewcgB193
Cp4.1LG14g10610Watermelon (Charleston Gray)cpewcgB201
Cp4.1LG14g10610Watermelon (97103) v1cpewmB202
Cp4.1LG14g10610Watermelon (97103) v1cpewmB230
Cp4.1LG14g10610Melon (DHL92) v3.5.1cpemeB184
Cp4.1LG14g10610Melon (DHL92) v3.5.1cpemeB206
Cp4.1LG14g10610Cucumber (Gy14) v2cgybcpeB325