Cp4.1LG14g10260 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG14g10260
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionChalcone-flavanone isomerase family protein
LocationCp4.1LG14 : 8618551 .. 8620176 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGCGTTTCTCTGGACTCTCACGCTCCAACGGTCATATTTTTATTTACTCCGTTCCCGTGTCCTATAAAACCCCCTCTCCTCCTCCGTTTCCGTCACCGGAATCCTAATTCTTCCACCGTCTTCTCAGAGATTACAATGGAGACTCCGTCGTCGATCAGGCGCGTAACTCGATCCCAAACTCTCGCTGCTGCAAACTCCGTCAACGACAGTGAGCCTCGTTTCTACGTTCTTTGAAATCCCGTTCTTGAAGAAACTAAAAGATCGATTCAATCGGGTTTAAATTGATGGGTTATGGTAAATTTAATCTTTGATTCTCTAACGTGTATGCGTTCTTTTGGTCGTGTTTTTAGGGACGGTTGAGGATTATGACAGCAATGGCTTATCGAAATCCCGGGAGCGGAGTCGAAATTTGCAAGATTTGGCCGGGGCGAAAGGGCAAGATCGATCGGCGCTTATCGACATTACTAATGACTCCCCCATTGTCAGCTTGGCAGCGGGGAATTTGACGACACCGATATCGTCTGCGACGAAACAGAGGAGTTTTCGGCCGAAGATGATGACTCCCGGATCAGGGGAAGCCTTATTGAGAGGGCAAGTTAAAACCCTTTTGCAGAAAGTGGAAGAAGAAGCTGAAATTTCTAAGCTTTCTTTAGATAGCTGGCCGGCGGGACTTCTCGACCCGATTCCGGCTAACATGCTGCAGATCTTGGATACGTCTCGGGATGGAAATCTTTTCGATATCACAAACGATGATCCCGTTGATGTTGATCTGTTTAAGGCAAAGAAACAAGAAGAGAATCAGATTACTCGGTCTCTATTGTTGGATTTCGCTGAGAAATCCGAGATAATCGATGAAGATACGTCATCAGATTGCTCATCTGTTCTCGCCCGTCAAGAGAAGTTGTCGTCGTTATCACCGTCGCTGTCACAAGATGACGACGTCTCTTCTCTGTGGTCGATTCAAGCGAACGCAAGCAGCCACGGCAAAGACGTGGATGAAGAAGAGTTGATCGAACACGAGGACGAGGACGAGGAAGAGGAAGAGGAAGTAGACAAGCTAAAGTGGGGACTTCGTAAAATTAGTGTAAACGAGAAGGGAAAAGCGGAGAATTTTGTAGGGAAGCACGTGAGGTTCGTGTATGATAGCGAAGAGGAACTGATCGAGGACGAGGAAGAGGAAGAAGACAACGAAGACGGGTTGGTAGACGAGCTATGTTGGGGACTTAGTAAAATTAGTGTAAACGAGAAGGGGAAAGCAAAGAATTTTACAGGGAAGCACACAAGGTTCGTGTACGATAGTGAAGATGAACTGATTGAGGAAGTTAGTGACGAGAGCCATGACGAGGTGTCACCGAGCGTCCTCCATTTGAAGGGAGTACCGACGCCCAAAGGAAAACATTTACGATTCCAATCCGAGAGCGAATAGTTAAAAAAACGAGACTCGGTTGAAATTTGTAATGTTGTCTTTCTTTGACAACAACAAATTAGGGTTTTGTGGGGGAGATTTCGTGCCTGTTTTTTAGCGATGTTTTTCTTTGCCTTTTGCTTTGTTGCTATGATAATATTACTATATTTTACGAGATATAAGGTGCAGTATTTAATATCACGACTGTCTCGTAATATAAA

mRNA sequence

CGCGTTTCTCTGGACTCTCACGCTCCAACGGTCATATTTTTATTTACTCCGTTCCCGTGTCCTATAAAACCCCCTCTCCTCCTCCGTTTCCGTCACCGGAATCCTAATTCTTCCACCGTCTTCTCAGAGATTACAATGGAGACTCCGTCGTCGATCAGGCGCGTAACTCGATCCCAAACTCTCGCTGCTGCAAACTCCGTCAACGACAGGACGGTTGAGGATTATGACAGCAATGGCTTATCGAAATCCCGGGAGCGGAGTCGAAATTTGCAAGATTTGGCCGGGGCGAAAGGGCAAGATCGATCGGCGCTTATCGACATTACTAATGACTCCCCCATTGTCAGCTTGGCAGCGGGGAATTTGACGACACCGATATCGTCTGCGACGAAACAGAGGAGTTTTCGGCCGAAGATGATGACTCCCGGATCAGGGGAAGCCTTATTGAGAGGGCAAGTTAAAACCCTTTTGCAGAAAGTGGAAGAAGAAGCTGAAATTTCTAAGCTTTCTTTAGATAGCTGGCCGGCGGGACTTCTCGACCCGATTCCGGCTAACATGCTGCAGATCTTGGATACGTCTCGGGATGGAAATCTTTTCGATATCACAAACGATGATCCCGTTGATGTTGATCTGTTTAAGGCAAAGAAACAAGAAGAGAATCAGATTACTCGGTCTCTATTGTTGGATTTCGCTGAGAAATCCGAGATAATCGATGAAGATACGTCATCAGATTGCTCATCTGTTCTCGCCCGTCAAGAGAAGTTGTCGTCGTTATCACCGTCGCTGTCACAAGATGACGACGTCTCTTCTCTGTGGTCGATTCAAGCGAACGCAAGCAGCCACGGCAAAGACGTGGATGAAGAAGAGTTGATCGAACACGAGGACGAGGACGAGGAAGAGGAAGAGGAAGTAGACAAGCTAAAGTGGGGACTTCGTAAAATTAGTGTAAACGAGAAGGGAAAAGCGGAGAATTTTGTAGGGAAGCACGTGAGGTTCGTGTATGATAGCGAAGAGGAACTGATCGAGGACGAGGAAGAGGAAGAAGACAACGAAGACGGGTTGGTAGACGAGCTATGTTGGGGACTTAGTAAAATTAGTGTAAACGAGAAGGGGAAAGCAAAGAATTTTACAGGGAAGCACACAAGGTTCGTGTACGATAGTGAAGATGAACTGATTGAGGAAGTTAGTGACGAGAGCCATGACGAGGTGTCACCGAGCGTCCTCCATTTGAAGGGAGTACCGACGCCCAAAGGAAAACATTTACGATTCCAATCCGAGAGCGAATAGTTAAAAAAACGAGACTCGGTTGAAATTTGTAATGTTGTCTTTCTTTGACAACAACAAATTAGGGTTTTGTGGGGGAGATTTCGTGCCTGTTTTTTAGCGATGTTTTTCTTTGCCTTTTGCTTTGTTGCTATGATAATATTACTATATTTTACGAGATATAAGGTGCAGTATTTAATATCACGACTGTCTCGTAATATAAA

Coding sequence (CDS)

ATGGAGACTCCGTCGTCGATCAGGCGCGTAACTCGATCCCAAACTCTCGCTGCTGCAAACTCCGTCAACGACAGGACGGTTGAGGATTATGACAGCAATGGCTTATCGAAATCCCGGGAGCGGAGTCGAAATTTGCAAGATTTGGCCGGGGCGAAAGGGCAAGATCGATCGGCGCTTATCGACATTACTAATGACTCCCCCATTGTCAGCTTGGCAGCGGGGAATTTGACGACACCGATATCGTCTGCGACGAAACAGAGGAGTTTTCGGCCGAAGATGATGACTCCCGGATCAGGGGAAGCCTTATTGAGAGGGCAAGTTAAAACCCTTTTGCAGAAAGTGGAAGAAGAAGCTGAAATTTCTAAGCTTTCTTTAGATAGCTGGCCGGCGGGACTTCTCGACCCGATTCCGGCTAACATGCTGCAGATCTTGGATACGTCTCGGGATGGAAATCTTTTCGATATCACAAACGATGATCCCGTTGATGTTGATCTGTTTAAGGCAAAGAAACAAGAAGAGAATCAGATTACTCGGTCTCTATTGTTGGATTTCGCTGAGAAATCCGAGATAATCGATGAAGATACGTCATCAGATTGCTCATCTGTTCTCGCCCGTCAAGAGAAGTTGTCGTCGTTATCACCGTCGCTGTCACAAGATGACGACGTCTCTTCTCTGTGGTCGATTCAAGCGAACGCAAGCAGCCACGGCAAAGACGTGGATGAAGAAGAGTTGATCGAACACGAGGACGAGGACGAGGAAGAGGAAGAGGAAGTAGACAAGCTAAAGTGGGGACTTCGTAAAATTAGTGTAAACGAGAAGGGAAAAGCGGAGAATTTTGTAGGGAAGCACGTGAGGTTCGTGTATGATAGCGAAGAGGAACTGATCGAGGACGAGGAAGAGGAAGAAGACAACGAAGACGGGTTGGTAGACGAGCTATGTTGGGGACTTAGTAAAATTAGTGTAAACGAGAAGGGGAAAGCAAAGAATTTTACAGGGAAGCACACAAGGTTCGTGTACGATAGTGAAGATGAACTGATTGAGGAAGTTAGTGACGAGAGCCATGACGAGGTGTCACCGAGCGTCCTCCATTTGAAGGGAGTACCGACGCCCAAAGGAAAACATTTACGATTCCAATCCGAGAGCGAATAG

Protein sequence

METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRNLQDLAGAKGQDRSALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEISKLSLDSWPAGLLDPIPANMLQILDTSRDGNLFDITNDDPVDVDLFKAKKQEENQITRSLLLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLSQDDDVSSLWSIQANASSHGKDVDEEELIEHEDEDEEEEEEVDKLKWGLRKISVNEKGKAENFVGKHVRFVYDSEEELIEDEEEEEDNEDGLVDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDELIEEVSDESHDEVSPSVLHLKGVPTPKGKHLRFQSESE
Homology
[Close]
BLAST of Cp4.1LG14g10260 vs. TrEMBL
Match: E5RDD2_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.6e-106
Identity = 258/416 (62.02%), Postives = 290/416 (69.71%), Query Frame = 1 

Query: 1   METPSSIRRVTRSQTLAAANSVND------RTVEDYDSNGLSKSRERSRNLQDLAGAKGQ 60
           METPSSIRRVTRSQTL+AANSVN+      R VE+ D+NGLSKSR+R+R  QDL G KGQ
Sbjct: 1   METPSSIRRVTRSQTLSAANSVNNNNVSIPRKVEECDNNGLSKSRQRNRKSQDLGGVKGQ 60

Query: 61  D-RSALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQK 120
           D RSALIDITNDSPIV LAAG+L TPISS TKQRS RPKMMTPGSGEALLRGQVKTLLQK
Sbjct: 61  DNRSALIDITNDSPIVGLAAGSLMTPISSVTKQRSCRPKMMTPGSGEALLRGQVKTLLQK 120

Query: 121 VEEEAEISKLSLDSWP-------AGLLDPIPANMLQILDTSRDGNLFDITNDD------- 180
           VEEEAEISKLSL+S P       AGLL P PAN  QI + S+D NL  IT+         
Sbjct: 121 VEEEAEISKLSLESRPFVHLQSPAGLLAPTPANTPQI-NLSQDENLCSITSHPIVEEQTI 180

Query: 181 ---PVDVDLFKAKKQEENQITRSLLLDFAEKSEIIDED-TSSDCSSVLARQEKLS---SL 240
               VD+DLF  KKQEENQI RSLLLDF+EKSE  D++ TSSDCSSVL  Q+K S   +L
Sbjct: 181 SQVAVDIDLFNGKKQEENQINRSLLLDFSEKSETNDDEATSSDCSSVLTHQDKFSKSSTL 240

Query: 241 SPSLSQDDDVSSLWSIQANASSHGKDVDEEELIEHEDEDEEEEEEVDKLKWGLRKISVNE 300
           S S SQDDD SSLWSIQ NASSH            EDE++E+ EE               
Sbjct: 241 SLSPSQDDDNSSLWSIQVNASSH-----------DEDEEDEDIEE--------------- 300

Query: 301 KGKAENFVGKHVRFVYDSEEELIEDEEEEE--DNEDGLVDELCWGLSKISVNEKGKAKNF 360
                           + EE++IEDEE+EE  D + GLVDELC G+SKISVNEKG+A+ F
Sbjct: 301 ----------------EEEEDVIEDEEDEEGADYDGGLVDELCKGISKISVNEKGEAEEF 360

Query: 361 TGKHTRFVYDSEDELIEEVSDESH----DEVSPSVLHLKGVPTPKGKHLRFQSESE 383
            GKHTRFVY+SEDE+IEEVSDES       VSPS+L LKG+PTPKGKHLRF  E E
Sbjct: 361 VGKHTRFVYNSEDEMIEEVSDESRGGGGGGVSPSILRLKGMPTPKGKHLRFGYEEE 373

[Close]
BLAST of Cp4.1LG14g10260 vs. TrEMBL
Match: A0A0A0L4Y0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002810 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 1.1e-96
Identity = 239/412 (58.01%), Postives = 272/412 (66.02%), Query Frame = 1 

Query: 1   METPSSIRRVTRSQTLAAANSVND------RTVEDYDSNGLSKSRERSRNLQDLAGAKGQ 60
           METPSSIRRVTRSQTL+AA S+N+      R VE+ D+NGLSKSR+R+R  QDL G KGQ
Sbjct: 1   METPSSIRRVTRSQTLSAAQSINNSNVSIPRKVEECDNNGLSKSRQRNRKSQDLGGVKGQ 60

Query: 61  DRSALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKV 120
           DRSALIDITNDSPIV LAAG+L TPISS TKQRS RPKMMTPGSGEALLRGQVKTLLQKV
Sbjct: 61  DRSALIDITNDSPIVGLAAGSLMTPISSVTKQRSCRPKMMTPGSGEALLRGQVKTLLQKV 120

Query: 121 EEEAEISKLSLDSWP-------AGLLDPIPANMLQILDTSRDGNLFDITNDD-------- 180
           EEEAEISKLSL+S P       AGLL P PAN  QI + ++D N+  ITN          
Sbjct: 121 EEEAEISKLSLESRPFVHLQSPAGLLAPTPANTPQI-NLTQDENICSITNHPIVEEQTIS 180

Query: 181 --PVDVDLFKAKKQEENQITRSLLLDFAEKSEIIDED-TSSDCSSVLARQEKLSSLSPSL 240
              VDVDLF  K+QEENQI RSLLLDF+EKSE  D++ TSSDCSSVL             
Sbjct: 181 QVVVDVDLFNEKQQEENQINRSLLLDFSEKSETNDDEATSSDCSSVLTH----------- 240

Query: 241 SQDDDVSSLWSIQANASSHGKDVDEEELIEHEDEDEEEEEEVDKLKWGLRKISVNEKGKA 300
                             HGK      L     +D++         + L  I VN     
Sbjct: 241 ------------------HGKFSISSTLSLSPSQDDDN--------FSLWSIQVNASSHG 300

Query: 301 ENFVGKHVRFVYDSEEELIEDEEEEED----NEDGLVDELCWGLSKISVNEKGKAKNFTG 360
           E    + +    + EEE+IEDEE+EE     N+ GLVDELC G+SKISVNEKG+A+ F G
Sbjct: 301 EEEDDEDI----EEEEEVIEDEEDEEGDDYINDGGLVDELCKGISKISVNEKGEAEEFVG 360

Query: 361 KHTRFVYDSEDELIEEVSDESH--DEVSPSVLHLKGVPTPKGKHLRFQSESE 383
           KHTRFVYDSEDE+IEEVSDES     VSPS+L LKG+PTPKGKHLRF SE E
Sbjct: 361 KHTRFVYDSEDEMIEEVSDESRGGGGVSPSILRLKGMPTPKGKHLRFGSEEE 370

[Close]
BLAST of Cp4.1LG14g10260 vs. TrEMBL
Match: U5GBT7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s11620g PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 4.1e-67
Identity = 203/420 (48.33%), Postives = 247/420 (58.81%), Query Frame = 1 

Query: 1   METPSSIRRVTRSQTLAAANSVND----RTVEDYDSNGLSKSRERSRNLQDLAGAKGQDR 60
           METPSS +RVTRSQT+AA N+ N+    R +ED    G++KSR R+   Q       QDR
Sbjct: 65  METPSSTKRVTRSQTVAALNTNNNIPLSRKIEDSSDKGVTKSRRRNAKQQL------QDR 124

Query: 61  SALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMM---TPGSGEALLRGQVKTLLQK 120
           SALIDITNDSPIV +A G L TP S+  KQ++ R K     TPGSGEALLRGQVKTLLQK
Sbjct: 125 SALIDITNDSPIVGIAMGILETPSSALAKQKNSRAKNNIPNTPGSGEALLRGQVKTLLQK 184

Query: 121 VEEEAEISKLSLDSWP-----------AGLLDPIPANMLQILDTSRDGNLFDITNDDPVD 180
           VEEEAE+SKLSL++ P            GLL P PAN  Q+ + S D  +       PV 
Sbjct: 185 VEEEAELSKLSLENRPFLHLQGFVNSPMGLLAPTPANTPQVPNLSGDDIVLASVTPLPVI 244

Query: 181 VD----------LFKAKKQE----ENQITRSLLLDFAEKSEIIDEDTSSDCSSVLARQ-- 240
            +          +F  KKQE    +  +TRSL+LDF+EKSE  D   SS CSS L  Q  
Sbjct: 245 EEKLKICQEVSEIFNVKKQESLESQKSLTRSLMLDFSEKSESSD---SSKCSSALTCQGD 304

Query: 241 --EKLSSLSPSLSQ--DDDVSSLWSIQANASSHGKDVDEEELIEHEDEDEEEEEEVDKLK 300
             E ++S S   S   DDD +S+WSIQ NAS+H  D DEEE+IE   E+EEEEE      
Sbjct: 305 NCEVITSESKDKSSLADDDNASIWSIQVNASTH--DEDEEEVIE---EEEEEEEH----- 364

Query: 301 WGLRKISVNEKGKAENFVGKHVRFVYDSEEELIEDEEEEEDNEDGLVDELCWGLSKISVN 360
                                    Y   +E  E EEEEE +  GL+DELC G+S+ISV 
Sbjct: 365 -------------------------YYYRDEYEEAEEEEEADVGGLLDELCEGISQISVK 424

Query: 361 EKGKAKNFTGKHTRFVYDSEDELIEEVSDESHDEVSPSVLHLKGVPTPKGKHLRFQSESE 383
           EK  AK F GKHTRFVY+S+DE++EEV D   D+     L LKG+PTPKGKH+RF +E E
Sbjct: 425 EKAMAK-FEGKHTRFVYNSDDEIVEEVVDCGDDD-----LRLKGLPTPKGKHIRFHTEEE 434

[Close]
BLAST of Cp4.1LG14g10260 vs. TrEMBL
Match: M5WFK5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007215mg PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.3e-65
Identity = 205/420 (48.81%), Postives = 248/420 (59.05%), Query Frame = 1 

Query: 1   METPSSIRRVTRSQTLAAANSVNDR---TVEDYDSNGLSKSRERSRNLQDLAGAKGQDRS 60
           METPSSIRRVTRSQ L A NS  +    + ++ DS  + +S+ R RN     G + QDRS
Sbjct: 1   METPSSIRRVTRSQALVAQNSNTNNIPLSRKNEDSEKV-ESKSRPRN-----GKQQQDRS 60

Query: 61  ALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEE 120
           ALIDITNDSPIV LA G+L TP S+  KQRSFR K  TPGSGEALLRGQVKTLLQ+VEEE
Sbjct: 61  ALIDITNDSPIVGLAMGSLETPSSAIVKQRSFRAKN-TPGSGEALLRGQVKTLLQQVEEE 120

Query: 121 AEISKLSLDSWPA------------GLLDPIPANMLQILDTSRDGN-------------- 180
           AE+SK++L+S P             GLL P PAN  Q+ D S D +              
Sbjct: 121 AELSKITLESRPLRLLQGITGNSPMGLLAPTPANTPQVSDLSVDASGSNNGGVGFEKPSP 180

Query: 181 LFDITNDDPVDVDLFKAKKQE--ENQ---ITRSLLLDFAEKSEIIDEDTSSDCSSVLARQ 240
           L        V  D+F+ K QE  E+Q   I+RSLLLDF+EKSE+     SS+CSSV+   
Sbjct: 181 LIQEQLISQVVCDIFEGKNQESLESQKSIISRSLLLDFSEKSEV--SSVSSECSSVITEI 240

Query: 241 EKLSSLSPSLSQDDDVSSLWSIQANASSHGKDVDEEELIEHEDEDEEEEEEVDKLKWGLR 300
           ++ SS       DDD +S+WSIQ NAS+H  D DEEE+ + E+E+EEEEEE D       
Sbjct: 241 KEKSS------PDDDSASIWSIQVNASTH--DEDEEEVAQAEEEEEEEEEEED------- 300

Query: 301 KISVNEKGKAENFVGKHVRFVYDSEEELIEDEEEEEDNEDGLVDELCWGLSKISVNEKGK 360
                                Y +  E  E EE E+D    L DELC G++ I V+EK  
Sbjct: 301 --------------------YYLNLNEGYEIEEHEQDGGYDL-DELCDGINNICVDEKKM 360

Query: 361 AKNFTGKHTRFVYDSED--ELIEE-VSDESHDE---VSPSVLHLKGVPTPKGKHLRFQSE 381
              F GKHTRFVYDSED  E++EE  S ES D    VSPS L LKG+PTPKGKH+RF  E
Sbjct: 361 IPKFAGKHTRFVYDSEDDIEIVEEDFSAESPDSGAVVSPSALRLKGLPTPKGKHMRFLEE 375

[Close]
BLAST of Cp4.1LG14g10260 vs. TrEMBL
Match: F6GWM9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g03360 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.4e-61
Identity = 188/409 (45.97%), Postives = 230/409 (56.23%), Query Frame = 1 

Query: 1   METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRNLQDLAGAKGQDRSALI 60
           METPSS RRVTRSQ LAA+NS    + +  +S+   KSR+RS         K Q+R AL+
Sbjct: 1   METPSSTRRVTRSQALAASNSNIPISKKFEESDKGVKSRKRS--------GKQQERYALV 60

Query: 61  DITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI 120
           D+TNDSPIV +A G+L TP+SS  K +S + KM TPGSGEALLRGQVKTLLQKVEEEAE 
Sbjct: 61  DVTNDSPIVGVAMGSLETPLSSMAKNKSNQSKM-TPGSGEALLRGQVKTLLQKVEEEAEH 120

Query: 121 SKLSLDSWPA----------GLLDPIPANMLQILDTSRDGNLFDITNDD----------- 180
           SKLSL+  P            LL P PAN  Q+L+ S +     I N+            
Sbjct: 121 SKLSLEGRPILHVQGLISSPMLLAPTPANTPQLLNLSVE----QIINNSGVMPSPMGQEL 180

Query: 181 ---PVDVDLFKAKKQEE-----NQITRSLLLDFAEKSEIIDEDTSSDCSSVLARQEKLSS 240
               V  D+F  KK+E      + +TRSLL DF+EKSEI +   SS+C            
Sbjct: 181 MISEVVTDIFDGKKKENIESEASPVTRSLLSDFSEKSEISE---SSECKK---------- 240

Query: 241 LSPSLSQDDDVSSLWSIQANASSHGKDVDEEELIEHEDEDEEEEEEVDKLKWGLRKISVN 300
                 Q+DD +S+WSIQ NAS           I+ EDE+E  EEE D            
Sbjct: 241 ---KTFQEDDDASVWSIQVNAS-----------IKDEDEEEAFEEEED------------ 300

Query: 301 EKGKAENFVGKHVRFVYDSEEELIEDEEEEEDNEDGLVDELCWGLSKISVNEKGKAKNFT 360
                           Y  E E  E+EEEE +   G+VDELC G+SKISVNE G A    
Sbjct: 301 ----------------YREEIEYEEEEEEEYEENGGIVDELCEGMSKISVNENGIAAKSR 337

Query: 361 GKHTRFVYDSEDELIEEVSDESHDEVSPSVLHLKGVPTPKGKHLRFQSE 381
           GKHTRFVY+S+DEL+EE  ++     SP VLHLKG+PTPKGKHLRF +E
Sbjct: 361 GKHTRFVYNSDDELVEEEEEKG----SPGVLHLKGLPTPKGKHLRFPTE 337

[Close]
BLAST of Cp4.1LG14g10260 vs. TAIR10
Match: AT5G66230.1 (AT5G66230.1 Chalcone-flavanone isomerase family protein)

HSP 1 Score: 184.5 bits (467), Expect = 1.2e-46
Identity = 164/381 (43.04%), Postives = 209/381 (54.86%), Query Frame = 1 

Query: 1   METPSSIRRVTRSQTLAAANSV-NDRTVEDYDSNGLSKSRERSRNLQDLAGAKGQDRSAL 60
           METPSS RRVTRSQT  A N++ + +  +D+     SKS +R+       GAK  DRSAL
Sbjct: 1   METPSSTRRVTRSQTRCAINNLLSSKKADDWSDKCQSKSVQRN-------GAK--DRSAL 60

Query: 61  IDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAE 120
            DITNDSPIV LA   + TP S    +R+      TPGSGEALLRGQVKTLLQKVEEEA+
Sbjct: 61  FDITNDSPIVGLA---MQTPSSGVVGKRNMSRINNTPGSGEALLRGQVKTLLQKVEEEAD 120

Query: 121 ISKLSLDS--------WPAGLLDPIPANMLQILDTSRDGNLFDITNDDPVDVDLFKAKKQ 180
           ++K+SL+S         P GLL P PAN  Q+L  S +     +    PV    F+A  Q
Sbjct: 121 LTKISLESRPFIHLVTSPMGLLAPTPANTPQVLGFSDE---VQVVITSPVVAGQFRAPSQ 180

Query: 181 ----------EEN-------QITRSLLLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSP 240
                     EE+        ITRSLLLDF++KSE+ +   SSDCSSV+ +         
Sbjct: 181 VVESNMFDEKEESLELEKSPSITRSLLLDFSDKSELWE---SSDCSSVVTQ--------- 240

Query: 241 SLSQDDDVSSLWSIQANASSHGKDVDEEEL----------IEHEDEDEEEEEE--VDKLK 300
             + +DD SS+WS+QANAS+  ++ D+EE            E+ DE+EEEEE   VD L 
Sbjct: 241 --NPEDDNSSVWSMQANASAKDEEYDDEEEEAYSYGEEYDEEYYDEEEEEEEGGIVDGLC 300

Query: 301 WGLRKISVNEKGKAENFVGKHVRFVYDSEEELIEDEEEEEDNEDGLVDELCWGLSKISVN 341
            G+RK+SV       +F GKH RFVYDSE+E I    E +D   G++             
Sbjct: 301 EGIRKMSVE-----TDFAGKHTRFVYDSEDEEI---VEAKDQSPGVL------------- 328

[Close]
BLAST of Cp4.1LG14g10260 vs. TAIR10
Match: AT3G51230.1 (AT3G51230.1 BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.1))

HSP 1 Score: 105.5 bits (262), Expect = 7.2e-23
Identity = 90/204 (44.12%), Postives = 110/204 (53.92%), Query Frame = 1 

Query: 1   METPSSIRRVTRSQTLAAAN-SVNDRTVEDYDSNGLSKSRERSRNLQDLAGAKGQDRSAL 60
           METPSS +RVTRSQ ++A N S +D  V    SN    S    R        K +DRSAL
Sbjct: 1   METPSSAKRVTRSQAISAINDSDSDFKVPFSSSNKTEDSSIDQR--------KEEDRSAL 60

Query: 61  IDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAE 120
           IDITNDSPIV L     T P     K++S R K+ TPGSGEALLRGQVKTLL KVEE  E
Sbjct: 61  IDITNDSPIVGLTMQ--TPPSGFMVKRKSSRIKI-TPGSGEALLRGQVKTLLHKVEEGTE 120

Query: 121 ISK-------LSLDSWPAGLLDPIPANMLQILDTSRDGNLFDITNDDPV------DVDLF 180
           +         + L + P  LL P PAN  Q  + S D     I +  P+         + 
Sbjct: 121 LIHSIKTRPFIHLVTSPMRLLAPTPANTPQFPNFSDDDVKIKIAS--PIVAGNLRTSQIS 180

Query: 181 KAKKQEENQITRSLLLDFAEKSEI 191
           + K+ +   ITRSLL DF +KS +
Sbjct: 181 EEKEDKSMSITRSLLFDFTDKSAL 191

[Close]
BLAST of Cp4.1LG14g10260 vs. NCBI nr
Match: gi|659095386|ref|XP_008448552.1| (PREDICTED: YTH domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 393.7 bits (1010), Expect = 3.8e-106
Identity = 258/416 (62.02%), Postives = 290/416 (69.71%), Query Frame = 1 

Query: 1   METPSSIRRVTRSQTLAAANSVND------RTVEDYDSNGLSKSRERSRNLQDLAGAKGQ 60
           METPSSIRRVTRSQTL+AANSVN+      R VE+ D+NGLSKSR+R+R  QDL G KGQ
Sbjct: 1   METPSSIRRVTRSQTLSAANSVNNNNVSIPRKVEECDNNGLSKSRQRNRKSQDLGGVKGQ 60

Query: 61  D-RSALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQK 120
           D RSALIDITNDSPIV LAAG+L TPISS TKQRS RPKMMTPGSGEALLRGQVKTLLQK
Sbjct: 61  DNRSALIDITNDSPIVGLAAGSLMTPISSVTKQRSCRPKMMTPGSGEALLRGQVKTLLQK 120

Query: 121 VEEEAEISKLSLDSWP-------AGLLDPIPANMLQILDTSRDGNLFDITNDD------- 180
           VEEEAEISKLSL+S P       AGLL P PAN  QI + S+D NL  IT+         
Sbjct: 121 VEEEAEISKLSLESRPFVHLQSPAGLLAPTPANTPQI-NLSQDENLCSITSHPIVEEQTI 180

Query: 181 ---PVDVDLFKAKKQEENQITRSLLLDFAEKSEIIDED-TSSDCSSVLARQEKLS---SL 240
               VD+DLF  KKQEENQI RSLLLDF+EKSE  D++ TSSDCSSVL  Q+K S   +L
Sbjct: 181 SQVAVDIDLFNGKKQEENQINRSLLLDFSEKSETNDDEATSSDCSSVLTHQDKFSKSSTL 240

Query: 241 SPSLSQDDDVSSLWSIQANASSHGKDVDEEELIEHEDEDEEEEEEVDKLKWGLRKISVNE 300
           S S SQDDD SSLWSIQ NASSH            EDE++E+ EE               
Sbjct: 241 SLSPSQDDDNSSLWSIQVNASSH-----------DEDEEDEDIEE--------------- 300

Query: 301 KGKAENFVGKHVRFVYDSEEELIEDEEEEE--DNEDGLVDELCWGLSKISVNEKGKAKNF 360
                           + EE++IEDEE+EE  D + GLVDELC G+SKISVNEKG+A+ F
Sbjct: 301 ----------------EEEEDVIEDEEDEEGADYDGGLVDELCKGISKISVNEKGEAEEF 360

Query: 361 TGKHTRFVYDSEDELIEEVSDESH----DEVSPSVLHLKGVPTPKGKHLRFQSESE 383
            GKHTRFVY+SEDE+IEEVSDES       VSPS+L LKG+PTPKGKHLRF  E E
Sbjct: 361 VGKHTRFVYNSEDEMIEEVSDESRGGGGGGVSPSILRLKGMPTPKGKHLRFGYEEE 373

[Close]
BLAST of Cp4.1LG14g10260 vs. NCBI nr
Match: gi|449456805|ref|XP_004146139.1| (PREDICTED: uncharacterized protein LOC101215376 [Cucumis sativus])

HSP 1 Score: 361.7 bits (927), Expect = 1.6e-96
Identity = 239/412 (58.01%), Postives = 272/412 (66.02%), Query Frame = 1 

Query: 1   METPSSIRRVTRSQTLAAANSVND------RTVEDYDSNGLSKSRERSRNLQDLAGAKGQ 60
           METPSSIRRVTRSQTL+AA S+N+      R VE+ D+NGLSKSR+R+R  QDL G KGQ
Sbjct: 1   METPSSIRRVTRSQTLSAAQSINNSNVSIPRKVEECDNNGLSKSRQRNRKSQDLGGVKGQ 60

Query: 61  DRSALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKV 120
           DRSALIDITNDSPIV LAAG+L TPISS TKQRS RPKMMTPGSGEALLRGQVKTLLQKV
Sbjct: 61  DRSALIDITNDSPIVGLAAGSLMTPISSVTKQRSCRPKMMTPGSGEALLRGQVKTLLQKV 120

Query: 121 EEEAEISKLSLDSWP-------AGLLDPIPANMLQILDTSRDGNLFDITNDD-------- 180
           EEEAEISKLSL+S P       AGLL P PAN  QI + ++D N+  ITN          
Sbjct: 121 EEEAEISKLSLESRPFVHLQSPAGLLAPTPANTPQI-NLTQDENICSITNHPIVEEQTIS 180

Query: 181 --PVDVDLFKAKKQEENQITRSLLLDFAEKSEIIDED-TSSDCSSVLARQEKLSSLSPSL 240
              VDVDLF  K+QEENQI RSLLLDF+EKSE  D++ TSSDCSSVL             
Sbjct: 181 QVVVDVDLFNEKQQEENQINRSLLLDFSEKSETNDDEATSSDCSSVLTH----------- 240

Query: 241 SQDDDVSSLWSIQANASSHGKDVDEEELIEHEDEDEEEEEEVDKLKWGLRKISVNEKGKA 300
                             HGK      L     +D++         + L  I VN     
Sbjct: 241 ------------------HGKFSISSTLSLSPSQDDDN--------FSLWSIQVNASSHG 300

Query: 301 ENFVGKHVRFVYDSEEELIEDEEEEED----NEDGLVDELCWGLSKISVNEKGKAKNFTG 360
           E    + +    + EEE+IEDEE+EE     N+ GLVDELC G+SKISVNEKG+A+ F G
Sbjct: 301 EEEDDEDI----EEEEEVIEDEEDEEGDDYINDGGLVDELCKGISKISVNEKGEAEEFVG 360

Query: 361 KHTRFVYDSEDELIEEVSDESH--DEVSPSVLHLKGVPTPKGKHLRFQSESE 383
           KHTRFVYDSEDE+IEEVSDES     VSPS+L LKG+PTPKGKHLRF SE E
Sbjct: 361 KHTRFVYDSEDEMIEEVSDESRGGGGVSPSILRLKGMPTPKGKHLRFGSEEE 370

[Close]
BLAST of Cp4.1LG14g10260 vs. NCBI nr
Match: gi|566170831|ref|XP_006383108.1| (hypothetical protein POPTR_0005s11620g [Populus trichocarpa])

HSP 1 Score: 263.5 bits (672), Expect = 5.9e-67
Identity = 203/420 (48.33%), Postives = 247/420 (58.81%), Query Frame = 1 

Query: 1   METPSSIRRVTRSQTLAAANSVND----RTVEDYDSNGLSKSRERSRNLQDLAGAKGQDR 60
           METPSS +RVTRSQT+AA N+ N+    R +ED    G++KSR R+   Q       QDR
Sbjct: 65  METPSSTKRVTRSQTVAALNTNNNIPLSRKIEDSSDKGVTKSRRRNAKQQL------QDR 124

Query: 61  SALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMM---TPGSGEALLRGQVKTLLQK 120
           SALIDITNDSPIV +A G L TP S+  KQ++ R K     TPGSGEALLRGQVKTLLQK
Sbjct: 125 SALIDITNDSPIVGIAMGILETPSSALAKQKNSRAKNNIPNTPGSGEALLRGQVKTLLQK 184

Query: 121 VEEEAEISKLSLDSWP-----------AGLLDPIPANMLQILDTSRDGNLFDITNDDPVD 180
           VEEEAE+SKLSL++ P            GLL P PAN  Q+ + S D  +       PV 
Sbjct: 185 VEEEAELSKLSLENRPFLHLQGFVNSPMGLLAPTPANTPQVPNLSGDDIVLASVTPLPVI 244

Query: 181 VD----------LFKAKKQE----ENQITRSLLLDFAEKSEIIDEDTSSDCSSVLARQ-- 240
            +          +F  KKQE    +  +TRSL+LDF+EKSE  D   SS CSS L  Q  
Sbjct: 245 EEKLKICQEVSEIFNVKKQESLESQKSLTRSLMLDFSEKSESSD---SSKCSSALTCQGD 304

Query: 241 --EKLSSLSPSLSQ--DDDVSSLWSIQANASSHGKDVDEEELIEHEDEDEEEEEEVDKLK 300
             E ++S S   S   DDD +S+WSIQ NAS+H  D DEEE+IE   E+EEEEE      
Sbjct: 305 NCEVITSESKDKSSLADDDNASIWSIQVNASTH--DEDEEEVIE---EEEEEEEH----- 364

Query: 301 WGLRKISVNEKGKAENFVGKHVRFVYDSEEELIEDEEEEEDNEDGLVDELCWGLSKISVN 360
                                    Y   +E  E EEEEE +  GL+DELC G+S+ISV 
Sbjct: 365 -------------------------YYYRDEYEEAEEEEEADVGGLLDELCEGISQISVK 424

Query: 361 EKGKAKNFTGKHTRFVYDSEDELIEEVSDESHDEVSPSVLHLKGVPTPKGKHLRFQSESE 383
           EK  AK F GKHTRFVY+S+DE++EEV D   D+     L LKG+PTPKGKH+RF +E E
Sbjct: 425 EKAMAK-FEGKHTRFVYNSDDEIVEEVVDCGDDD-----LRLKGLPTPKGKHIRFHTEEE 434

[Close]
BLAST of Cp4.1LG14g10260 vs. NCBI nr
Match: gi|1009144141|ref|XP_015889638.1| (PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member B [Ziziphus jujuba])

HSP 1 Score: 261.5 bits (667), Expect = 2.2e-66
Identity = 204/416 (49.04%), Postives = 249/416 (59.86%), Query Frame = 1 

Query: 1   METPSSIRRVTRSQTLAAANSVND----RTVEDYDSNGLSKSRERSRNLQDLAGAKGQDR 60
           METP S RRVTRSQT AA N+ N     R +E+ ++ G+SKSR+R+         K +DR
Sbjct: 1   METPLSTRRVTRSQTSAALNNSNSIPISRKIEESET-GVSKSRKRN--------GKQEDR 60

Query: 61  SALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEE 120
           SALIDITNDSPIV LA G+L TP SS  K R  R K+ TPGSGEALLRGQVK LLQKVEE
Sbjct: 61  SALIDITNDSPIVGLAMGSLETPSSSTVKHRGNRAKI-TPGSGEALLRGQVKNLLQKVEE 120

Query: 121 EAEISKLSLDSWP--------AGLLDPIPANMLQILDTSRDGNLFDITNDDPVDV----- 180
           EAE+SKLSL+S P        AGLL P PAN  QI + S DG+L +  ND  ++      
Sbjct: 121 EAELSKLSLESRPFLLLQNSPAGLLAPTPANTPQIPNLSGDGSL-NADNDSALEAPSPIV 180

Query: 181 ----------DLFKAKKQE--ENQ---ITRSLLLDFAEKSEIIDEDTSSDCSSVLARQ-- 240
                     D+F   K+E  E+Q   ITRSLLLDF+EKSE+ D   SS+CSS L  Q  
Sbjct: 181 EEQLISQVVCDMFDGMKEESLESQKSIITRSLLLDFSEKSEVYD---SSECSSELTYQGF 240

Query: 241 -EKLSSLSPSLSQDDDVSSLWSIQANASSHGKDVDEEELIEHEDEDEEEEEEVDKLKWGL 300
            E  S      + DDD +S+WSIQ NAS+H               DE+EEEEV +     
Sbjct: 241 GETESERKEKPNPDDDDASIWSIQVNASAH---------------DEDEEEEVKE----- 300

Query: 301 RKISVNEKGKAENFVGKHVRFVYDSEEELIEDEEEEEDNEDGLVDELCWGLSKISVNEKG 360
                 E+   ++F G+             E +E EE+ ED LVD LC G+SKI+VNE+ 
Sbjct: 301 ------EEDGGDDFYGE-------------EYDEIEEEEEDELVDSLCDGMSKINVNEEK 360

Query: 361 KA-KNFTGKHTRFVYDSEDELIEEVSDESHDEVSPSVLHLKGVPTPKGKHLRFQSE 381
           K    F GKH RFVY+S+DE IEE   E  DEVSP+++ LKG+PTPKGKHLRF  E
Sbjct: 361 KMLPKFEGKHIRFVYNSDDE-IEENGVE--DEVSPTIVRLKGLPTPKGKHLRFFEE 360

[Close]
BLAST of Cp4.1LG14g10260 vs. NCBI nr
Match: gi|595818504|ref|XP_007204361.1| (hypothetical protein PRUPE_ppa007215mg [Prunus persica])

HSP 1 Score: 258.5 bits (659), Expect = 1.9e-65
Identity = 205/420 (48.81%), Postives = 248/420 (59.05%), Query Frame = 1 

Query: 1   METPSSIRRVTRSQTLAAANSVNDR---TVEDYDSNGLSKSRERSRNLQDLAGAKGQDRS 60
           METPSSIRRVTRSQ L A NS  +    + ++ DS  + +S+ R RN     G + QDRS
Sbjct: 1   METPSSIRRVTRSQALVAQNSNTNNIPLSRKNEDSEKV-ESKSRPRN-----GKQQQDRS 60

Query: 61  ALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEE 120
           ALIDITNDSPIV LA G+L TP S+  KQRSFR K  TPGSGEALLRGQVKTLLQ+VEEE
Sbjct: 61  ALIDITNDSPIVGLAMGSLETPSSAIVKQRSFRAKN-TPGSGEALLRGQVKTLLQQVEEE 120

Query: 121 AEISKLSLDSWPA------------GLLDPIPANMLQILDTSRDGN-------------- 180
           AE+SK++L+S P             GLL P PAN  Q+ D S D +              
Sbjct: 121 AELSKITLESRPLRLLQGITGNSPMGLLAPTPANTPQVSDLSVDASGSNNGGVGFEKPSP 180

Query: 181 LFDITNDDPVDVDLFKAKKQE--ENQ---ITRSLLLDFAEKSEIIDEDTSSDCSSVLARQ 240
           L        V  D+F+ K QE  E+Q   I+RSLLLDF+EKSE+     SS+CSSV+   
Sbjct: 181 LIQEQLISQVVCDIFEGKNQESLESQKSIISRSLLLDFSEKSEV--SSVSSECSSVITEI 240

Query: 241 EKLSSLSPSLSQDDDVSSLWSIQANASSHGKDVDEEELIEHEDEDEEEEEEVDKLKWGLR 300
           ++ SS       DDD +S+WSIQ NAS+H  D DEEE+ + E+E+EEEEEE D       
Sbjct: 241 KEKSS------PDDDSASIWSIQVNASTH--DEDEEEVAQAEEEEEEEEEEED------- 300

Query: 301 KISVNEKGKAENFVGKHVRFVYDSEEELIEDEEEEEDNEDGLVDELCWGLSKISVNEKGK 360
                                Y +  E  E EE E+D    L DELC G++ I V+EK  
Sbjct: 301 --------------------YYLNLNEGYEIEEHEQDGGYDL-DELCDGINNICVDEKKM 360

Query: 361 AKNFTGKHTRFVYDSED--ELIEE-VSDESHDE---VSPSVLHLKGVPTPKGKHLRFQSE 381
              F GKHTRFVYDSED  E++EE  S ES D    VSPS L LKG+PTPKGKH+RF  E
Sbjct: 361 IPKFAGKHTRFVYDSEDDIEIVEEDFSAESPDSGAVVSPSALRLKGLPTPKGKHMRFLEE 375

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g10260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG14g10260 vs. TrEMBL
Match NameE-valueIdentityDescription
E5RDD2_CUCME2.6e-10662.02Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0L4Y0_CUCSA1.1e-9658.01Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002810 PE=4 SV=1[more]
U5GBT7_POPTR4.1e-6748.33Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s11620g PE=4 SV=1[more]
M5WFK5_PRUPE1.3e-6548.81Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007215mg PE=4 SV=1[more]
F6GWM9_VITVI3.4e-6145.97Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g03360 PE=4 SV=... [more]
BLAST of Cp4.1LG14g10260 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G66230.11.2e-4643.04 Chalcone-flavanone isomerase family protein[more]
AT3G51230.17.2e-2344.12 BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isome... [more]
BLAST of Cp4.1LG14g10260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659095386|ref|XP_008448552.1|3.8e-10662.02PREDICTED: YTH domain-containing protein 1-like [Cucumis melo][more]
gi|449456805|ref|XP_004146139.1|1.6e-9658.01PREDICTED: uncharacterized protein LOC101215376 [Cucumis sativus][more]
gi|566170831|ref|XP_006383108.1|5.9e-6748.33hypothetical protein POPTR_0005s11620g [Populus trichocarpa][more]
gi|1009144141|ref|XP_015889638.1|2.2e-6649.04PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member B [Ziziph... [more]
gi|595818504|ref|XP_007204361.1|1.9e-6548.81hypothetical protein PRUPE_ppa007215mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006631 fatty acid metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005504 fatty acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g10260.1Cp4.1LG14g10260.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 237..257
scor
NoneNo IPR availablePANTHERPTHR28039FAMILY NOT NAMEDcoord: 1..256
score: 1.3E-81coord: 288..382
score: 1.3
NoneNo IPR availablePANTHERPTHR28039:SF2SUBFAMILY NOT NAMEDcoord: 1..256
score: 1.3E-81coord: 288..382
score: 1.3