Cp4.1LG14g07870 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG14g07870
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionChloroplast-targeted copper chaperone, putative
LocationCp4.1LG14 : 6249306 .. 6250017 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCATTCCATAGCAGAAATGGTTCACTCCATAAACCGACACCCTTTTCTTTGCTTTTCATGTTCTTCTAAACCTAAACATTTTCACTTTGTTGCAGAGTTGTGTTCTTAGTGCAAGTGTTCAATGTGAAGCATGCACAGCAAAAGTCCAAGAGATTCTACAGAACATCTATGGTTTCTCTCTTTACCTCATTGTTCTTCATGTTCTTCATTGTTCTTCATTGTTCTTCATTGTTCTTCATTGTTTTTGATTCCCAGGTATTTACACCATCACAATGGATTCAGATGATGGGTCAGTCAGAATCTGTGGAAGAGTGAATCCAAGAACATTCCTGAAAGTGATTGAAAAGTCAGGCAAACATGCAGAGGTTAAAAGTATAAGATTTGACGGTGAAGCTGGAGATAGAAGATATTACCCTTATGGAGATGATCCCATTCATCATCCTTACCAGAATTCCCAAGAACAATCTCGCTGGTTTGACACAGCTTACCCCCACCAACCACCGCTTCCGCCGCAGCCATACCCTTGGCAGTTCATGCTGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCGCAGCCTGTCCCATGGTCAATGATAGGGCCGGGCGGGCCACCTGGTAATCCAGCCCCTGAGGAACCCAGCCAAGATAATAACAACAATCAGAGATGTTGTACAATTATGTGA

mRNA sequence

ATGGATCATTCCATAGCAGAAATGAGTTGTGTTCTTAGTGCAAGTGTTCAATGTGAAGCATGCACAGCAAAAGTCCAAGAGATTCTACAGAACATCTATGGTATTTACACCATCACAATGGATTCAGATGATGGGTCAGTCAGAATCTGTGGAAGAGTGAATCCAAGAACATTCCTGAAAGTGATTGAAAAGTCAGGCAAACATGCAGAGGTTAAAAGTATAAGATTTGACGGTGAAGCTGGAGATAGAAGATATTACCCTTATGGAGATGATCCCATTCATCATCCTTACCAGAATTCCCAAGAACAATCTCGCTGGTTTGACACAGCTTACCCCCACCAACCACCGCTTCCGCCGCAGCCATACCCTTGGCAGTTCATGCTGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCGCAGCCTGTCCCATGGTCAATGATAGGGCCGGGCGGGCCACCTGGTAATCCAGCCCCTGAGGAACCCAGCCAAGATAATAACAACAATCAGAGATGTTGTACAATTATGTGA

Coding sequence (CDS)

ATGGATCATTCCATAGCAGAAATGAGTTGTGTTCTTAGTGCAAGTGTTCAATGTGAAGCATGCACAGCAAAAGTCCAAGAGATTCTACAGAACATCTATGGTATTTACACCATCACAATGGATTCAGATGATGGGTCAGTCAGAATCTGTGGAAGAGTGAATCCAAGAACATTCCTGAAAGTGATTGAAAAGTCAGGCAAACATGCAGAGGTTAAAAGTATAAGATTTGACGGTGAAGCTGGAGATAGAAGATATTACCCTTATGGAGATGATCCCATTCATCATCCTTACCAGAATTCCCAAGAACAATCTCGCTGGTTTGACACAGCTTACCCCCACCAACCACCGCTTCCGCCGCAGCCATACCCTTGGCAGTTCATGCTGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCGCAGCCTGTCCCATGGTCAATGATAGGGCCGGGCGGGCCACCTGGTAATCCAGCCCCTGAGGAACCCAGCCAAGATAATAACAACAATCAGAGATGTTGTACAATTATGTGA

Protein sequence

MDHSIAEMSCVLSASVQCEACTAKVQEILQNIYGIYTITMDSDDGSVRICGRVNPRTFLKVIEKSGKHAEVKSIRFDGEAGDRRYYPYGDDPIHHPYQNSQEQSRWFDTAYPHQPPLPPQPYPWQFMLPQPQPQPQPQPQPQPQPQPQPVPWSMIGPGGPPGNPAPEEPSQDNNNNQRCCTIM
Homology
[Close]
BLAST of Cp4.1LG14g07870 vs. TrEMBL
Match: A0A0A0L264_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G047760 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.1e-37
Identity = 93/150 (62.00%), Postives = 102/150 (68.00%), Query Frame = 1 

Query: 40  MDSDDGSVRICGRVNPRTFLKVIEKSGKHAEVKSIRFDGEAGDRRYYP-YGDDPIHH--- 99
           MDSDDGSVRICGRVNPRTFLKVIEKSGKHAEV+SIRFDGEAGDRRYYP +GDD  +H   
Sbjct: 1   MDSDDGSVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYYPSFGDDASNHSSY 60

Query: 100 --PYQNSQEQSRWFDTAYPHQPPLPPQPYPWQFMLPQPQPQPQPQPQPQPQPQPQPVPWS 159
             PYQ+  EQS WFD  YP+     PQPYPWQ ML              PQPQPQPV W 
Sbjct: 61  SNPYQSYNEQSHWFDRCYPNLQ--RPQPYPWQLML--------------PQPQPQPVSWP 120

Query: 160 MIGPGGPPGNPAPEEPSQDNNNNQRCCTIM 184
           M+ PG P   P  +    + NN QRCCT+M
Sbjct: 121 MMWPGWP--QPDNQFLDGNQNNFQRCCTVM 132

[Close]
BLAST of Cp4.1LG14g07870 vs. TrEMBL
Match: A0A061F4U0_THECC (Spo11/DNA topoisomerase VI OS=Theobroma cacao GN=TCM_030659 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.0e-15
Identity = 61/156 (39.10%), Postives = 87/156 (55.77%), Query Frame = 1 

Query: 4   SIAEMSCVLSASVQCEACTAKVQEILQNIYGIYTITMDSDDGSVRICGRVNPRTFLKVIE 63
           S    SCVL  ++ CE C  KV ++LQN++G+Y++ +D++ G+V++ G+VNP    KV E
Sbjct: 316 SFLSESCVLKVNINCETCKKKVMDVLQNLHGVYSVVIDAEQGTVKVSGKVNPYIIFKVFE 375

Query: 64  KSGKHAEVKSIRFDGEAGDRRYYPY--GDDPIHH------PYQNSQEQSRWFDTAYPHQP 123
           K GKH EV  ++F+GE  +  YY Y  G+  I H      P     +   W+D  Y   P
Sbjct: 376 KYGKHGEVSCVKFEGEVREPIYYHYHGGNGYIPHISPHTYPLMGGPDNYSWYDRHYYAPP 435

Query: 124 PLPPQPYPWQFMLPQPQPQP-QPQPQPQPQPQPQPV 151
           PL P P P  + LP P+P P QP     P P+  PV
Sbjct: 436 PLAPPPPPPPY-LPPPRPPPLQPVINYFP-PKAPPV 469

[Close]
BLAST of Cp4.1LG14g07870 vs. TrEMBL
Match: A0A0D2SIS5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G449700 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-12
Identity = 61/180 (33.89%), Postives = 92/180 (51.11%), Query Frame = 1 

Query: 4   SIAEMSCVLSASVQCEACTAKVQEILQNIYGIYTITMDSDDGSVRICGRVNPRTFLKVIE 63
           S AEMSCVL  ++ C+ C  KV ++LQN++G+Y++ +D++ G++++ G VNP   L + E
Sbjct: 3   SRAEMSCVLKVNINCDTCRRKVMDVLQNLHGVYSVDIDAEKGTMKVSGNVNPNLILNIFE 62

Query: 64  KSGKHAEVKSIRFDGEAGDRRYYPYGDDPIHHPYQNSQEQSRWFDTAYPHQPPLPPQPY- 123
           K GKH E+  ++F+G+  D  Y+       HH           + + +P+     P PY 
Sbjct: 63  KYGKHGEISCVKFEGDTRDPFYH-------HHCNYYGGNGFIPYGSIHPYPFMQGPDPYF 122

Query: 124 PW---QFMLPQPQPQPQPQPQPQPQPQPQPVPWSMIGPGGPPGNPAPEEPSQDNNNNQRC 180
           PW       P P P P P P P P P P P+   +I    P   PA E    +  N  RC
Sbjct: 123 PWFDGHHYAPTPFP-PPPPPPPLPPPPPPPLQ-PVINYFPPKAPPAVEFEPPEEMNPDRC 173

[Close]
BLAST of Cp4.1LG14g07870 vs. TrEMBL
Match: U5GSR0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s37530g PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.1e-12
Identity = 74/206 (35.92%), Postives = 93/206 (45.15%), Query Frame = 1 

Query: 4   SIAEMSCVLSASVQCEACTAKVQEILQNIYGIYTITMDSDDGSVRICGRVNPRTFLKVIE 63
           S A+MSC++   V C+ C  ++ E+LQN+          + G+V++ G+VNP T L V +
Sbjct: 56  SNAQMSCMMRVDVHCDGCKRQMMEVLQNL---------KEQGTVKVIGKVNPTTILNVFD 115

Query: 64  KSGKHAEVKSIRFDGEA---------GDRRY----YPYGDDPIHHPYQ--NSQEQSRWFD 123
           K GKH EV S+RFDGE          GD  Y     PY   PI  PY      EQ  +  
Sbjct: 116 KYGKHGEVSSLRFDGEVMEQIPYSFYGDNPYNPHEVPYPPIPIPIPYHFFRGPEQQLYGR 175

Query: 124 TAYPHQPPL-----------PPQPYPWQFMLPQPQPQPQPQPQPQPQPQPQPVPWSMIGP 183
             YP  PPL           PPQ Y          P P P PQ Q Q QP PV  +   P
Sbjct: 176 NPYPMPPPLLGTMPPPPWPPPPQQY----------PPPPPLPQHQQQQQPSPVSKA---P 230

[Close]
BLAST of Cp4.1LG14g07870 vs. TrEMBL
Match: A0A087H945_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G142100 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.9e-11
Identity = 31/79 (39.24%), Postives = 53/79 (67.09%), Query Frame = 1 

Query: 1  MDHSIAEMSCVLSASVQCEACTAKVQEILQNIYGIYTITMDSDDGSVRICGRVNPRTFLK 60
          MD+++ +MSCV+  +  CE C  KV E++Q++  +Y++    DD ++++  R NP   L 
Sbjct: 1  MDYTV-DMSCVMKVNRNCELCRQKVTEMMQHVNVVYSVDFGGDDNTIKLKARANPNIILA 60

Query: 61 VIEKSGKHAEVKSIRFDGE 80
          VIE+ G+H +V ++RFDGE
Sbjct: 61 VIERYGEHGKVSNLRFDGE 78

[Close]
BLAST of Cp4.1LG14g07870 vs. TAIR10
Match: AT3G06130.1 (AT3G06130.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 2.8e-12
Identity = 28/63 (44.44%), Postives = 43/63 (68.25%), Query Frame = 1 

Query: 9  SCVLSASVQCEACTAKVQEILQNIYGIYTITMDSDDGSVRICGRVNPRTFLKVIEKSGKH 68
          +CVL  ++ C+ C  KV++ILQ I G++T  +DS+ G V + G V+P   +K + KSGKH
Sbjct: 11 TCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDSEQGKVTVSGSVDPSVLIKKLAKSGKH 70

Query: 69 AEV 72
          AE+
Sbjct: 71 AEI 73

[Close]
BLAST of Cp4.1LG14g07870 vs. TAIR10
Match: AT3G05220.1 (AT3G05220.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-11
Identity = 30/79 (37.97%), Postives = 46/79 (58.23%), Query Frame = 1 

Query: 9  SCVLSASVQCEACTAKVQEILQNIYGIYTITMDSDDGSVRICGRVNPRTFLKVIEKSGKH 68
          +CVL  +V CE C  KV++ LQ I G+Y++  D + G V + G ++P   +K + KSGKH
Sbjct: 11 TCVLKVNVHCEGCKHKVKKQLQKIEGVYSVKADVEQGRVTVTGNIDPALLVKKLSKSGKH 70

Query: 69 AEVKSIRFDGEAGDRRYYP 88
          AE+      G  G  + +P
Sbjct: 71 AEILGGGGGGGGGGGKGFP 89

[Close]
BLAST of Cp4.1LG14g07870 vs. TAIR10
Match: AT5G19090.1 (AT5G19090.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 2.3e-11
Identity = 27/63 (42.86%), Postives = 43/63 (68.25%), Query Frame = 1 

Query: 9  SCVLSASVQCEACTAKVQEILQNIYGIYTITMDSDDGSVRICGRVNPRTFLKVIEKSGKH 68
          +CVL  ++ C+ C  KV++ILQ I G++T  +D++ G V + G V+P   +K + KSGKH
Sbjct: 11 TCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSGKH 70

Query: 69 AEV 72
          AE+
Sbjct: 71 AEI 73

[Close]
BLAST of Cp4.1LG14g07870 vs. TAIR10
Match: AT3G13140.1 (AT3G13140.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 60.8 bits (146), Expect = 9.8e-10
Identity = 53/167 (31.74%), Postives = 82/167 (49.10%), Query Frame = 1 

Query: 1   MDHSIAEMSCVLSASVQCEACTAKVQEILQNIYGIYTITMDSDDGSVRICGRVNPRTFLK 60
           MD+++ +MSCV+  +  C+ C  KV E++  +YG+Y++    DD S+++  RVNP   L 
Sbjct: 1   MDYTV-DMSCVMKVNRGCQLCRQKVSEVMHCVYGVYSVDFTGDDNSMKLKARVNPNVLLA 60

Query: 61  VIEKSGKHAEVKSIRFDGEA----GDRRYYPYGDDPIHHPYQNSQEQSRWFDTAYP--HQ 120
           V E+ G+H ++ ++RFDGE     G   Y  YG    + P  +        + AYP  +Q
Sbjct: 61  VAERYGEHGKITNLRFDGEVMTPRGGGGY--YGQSGYYIPTTSRG------NYAYPSLYQ 120

Query: 121 PPLPPQPYPWQFMLPQPQPQPQPQPQPQPQPQPQPVPWSMIGPGGPP 162
            P PP  Y   +  P   P P+    P+    P   P     P  PP
Sbjct: 121 YPPPPHVYGGNYAHPPSNP-PRHSEAPRQATNPHTTPPYYSLPAPPP 157

[Close]
BLAST of Cp4.1LG14g07870 vs. TAIR10
Match: AT5G27690.1 (AT5G27690.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 8.3e-09
Identity = 25/61 (40.98%), Postives = 36/61 (59.02%), Query Frame = 1 

Query: 11 VLSASVQCEACTAKVQEILQNIYGIYTITMDSDDGSVRICGRVNPRTFLKVIEKSGKHAE 70
          VL  S+ CE C  K+++IL  I G+YT  +D     V + G V P   +K I K+G+HAE
Sbjct: 33 VLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRHAE 92

Query: 71 V 72
          +
Sbjct: 93 L 93

[Close]
BLAST of Cp4.1LG14g07870 vs. NCBI nr
Match: gi|659096307|ref|XP_008449024.1| (PREDICTED: uncharacterized protein LOC103491020 isoform X2 [Cucumis melo])

HSP 1 Score: 234.2 bits (596), Expect = 1.8e-58
Identity = 127/189 (67.20%), Postives = 143/189 (75.66%), Query Frame = 1 

Query: 1   MDHSIAEMSCVLSASVQCEACTAKVQEILQNIYGIYTITMDSDDGSVRICGRVNPRTFLK 60
           MD+S+AEMSCVL+ASVQCEAC AK+QEILQNIYGIYTITMDSDDGSVRICGRVNPRTFLK
Sbjct: 4   MDYSVAEMSCVLNASVQCEACKAKIQEILQNIYGIYTITMDSDDGSVRICGRVNPRTFLK 63

Query: 61  VIEKSGKHAEVKSIRFDGEAGDRRYYP-YGDDPIHH-----PYQNSQEQSRWFDTAYPHQ 120
           VIEKSGKHAEV+SIRFDGEAGDRRYYP +G+D  +H     PY +  EQS WFD +YP+ 
Sbjct: 64  VIEKSGKHAEVRSIRFDGEAGDRRYYPSFGEDTTNHSSYSNPYHSYNEQSHWFDRSYPNL 123

Query: 121 PPLPPQPYPWQFMLPQPQPQPQPQPQPQPQPQPQPVPWSMIGPGGPPGNPAPEEPSQDNN 180
               PQPYPWQ ML              PQPQPQPVPW MI PG P  +P  +    + +
Sbjct: 124 Q--RPQPYPWQLML--------------PQPQPQPVPWPMIWPGWP--HPDNQYLDGNQD 174

Query: 181 NNQRCCTIM 184
           NNQRCCT+M
Sbjct: 184 NNQRCCTVM 174

[Close]
BLAST of Cp4.1LG14g07870 vs. NCBI nr
Match: gi|778675787|ref|XP_004151526.2| (PREDICTED: uncharacterized protein LOC101203275 [Cucumis sativus])

HSP 1 Score: 230.3 bits (586), Expect = 2.6e-57
Identity = 127/189 (67.20%), Postives = 140/189 (74.07%), Query Frame = 1 

Query: 1   MDHSIAEMSCVLSASVQCEACTAKVQEILQNIYGIYTITMDSDDGSVRICGRVNPRTFLK 60
           MD+S+AEMSCVL+ASVQCEAC AK+QEILQNIYGIYTITMDSDDGSVRICGRVNPRTFLK
Sbjct: 4   MDYSVAEMSCVLNASVQCEACKAKIQEILQNIYGIYTITMDSDDGSVRICGRVNPRTFLK 63

Query: 61  VIEKSGKHAEVKSIRFDGEAGDRRYYP-YGDDPIHH-----PYQNSQEQSRWFDTAYPHQ 120
           VIEKSGKHAEV+SIRFDGEAGDRRYYP +GDD  +H     PYQ+  EQS WFD  YP+ 
Sbjct: 64  VIEKSGKHAEVRSIRFDGEAGDRRYYPSFGDDASNHSSYSNPYQSYNEQSHWFDRCYPNL 123

Query: 121 PPLPPQPYPWQFMLPQPQPQPQPQPQPQPQPQPQPVPWSMIGPGGPPGNPAPEEPSQDNN 180
               PQPYPWQ ML              PQPQPQPV W M+ PG P   P  +    + N
Sbjct: 124 Q--RPQPYPWQLML--------------PQPQPQPVSWPMMWPGWP--QPDNQFLDGNQN 174

Query: 181 NNQRCCTIM 184
           N QRCCT+M
Sbjct: 184 NFQRCCTVM 174

[Close]
BLAST of Cp4.1LG14g07870 vs. NCBI nr
Match: gi|659096305|ref|XP_008449023.1| (PREDICTED: uncharacterized protein LOC103491020 isoform X1 [Cucumis melo])

HSP 1 Score: 219.5 bits (558), Expect = 4.7e-54
Identity = 127/216 (58.80%), Postives = 143/216 (66.20%), Query Frame = 1 

Query: 1   MDHSIAEMSCVLSASVQCEACTAKVQEILQNIY--------------------------- 60
           MD+S+AEMSCVL+ASVQCEAC AK+QEILQNIY                           
Sbjct: 4   MDYSVAEMSCVLNASVQCEACKAKIQEILQNIYGFSLSLSPPYLFLLFPSVSYFLLFFLL 63

Query: 61  GIYTITMDSDDGSVRICGRVNPRTFLKVIEKSGKHAEVKSIRFDGEAGDRRYYP-YGDDP 120
           GIYTITMDSDDGSVRICGRVNPRTFLKVIEKSGKHAEV+SIRFDGEAGDRRYYP +G+D 
Sbjct: 64  GIYTITMDSDDGSVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYYPSFGEDT 123

Query: 121 IHH-----PYQNSQEQSRWFDTAYPHQPPLPPQPYPWQFMLPQPQPQPQPQPQPQPQPQP 180
            +H     PY +  EQS WFD +YP+     PQPYPWQ ML              PQPQP
Sbjct: 124 TNHSSYSNPYHSYNEQSHWFDRSYPNLQ--RPQPYPWQLML--------------PQPQP 183

Query: 181 QPVPWSMIGPGGPPGNPAPEEPSQDNNNNQRCCTIM 184
           QPVPW MI PG P  +P  +    + +NNQRCCT+M
Sbjct: 184 QPVPWPMIWPGWP--HPDNQYLDGNQDNNQRCCTVM 201

[Close]
BLAST of Cp4.1LG14g07870 vs. NCBI nr
Match: gi|700200882|gb|KGN56015.1| (hypothetical protein Csa_3G047760 [Cucumis sativus])

HSP 1 Score: 161.8 bits (408), Expect = 1.2e-36
Identity = 93/150 (62.00%), Postives = 102/150 (68.00%), Query Frame = 1 

Query: 40  MDSDDGSVRICGRVNPRTFLKVIEKSGKHAEVKSIRFDGEAGDRRYYP-YGDDPIHH--- 99
           MDSDDGSVRICGRVNPRTFLKVIEKSGKHAEV+SIRFDGEAGDRRYYP +GDD  +H   
Sbjct: 1   MDSDDGSVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYYPSFGDDASNHSSY 60

Query: 100 --PYQNSQEQSRWFDTAYPHQPPLPPQPYPWQFMLPQPQPQPQPQPQPQPQPQPQPVPWS 159
             PYQ+  EQS WFD  YP+     PQPYPWQ ML              PQPQPQPV W 
Sbjct: 61  SNPYQSYNEQSHWFDRCYPNLQ--RPQPYPWQLML--------------PQPQPQPVSWP 120

Query: 160 MIGPGGPPGNPAPEEPSQDNNNNQRCCTIM 184
           M+ PG P   P  +    + NN QRCCT+M
Sbjct: 121 MMWPGWP--QPDNQFLDGNQNNFQRCCTVM 132

[Close]
BLAST of Cp4.1LG14g07870 vs. NCBI nr
Match: gi|502099047|ref|XP_004491376.1| (PREDICTED: leucine-rich repeat extensin-like protein 1 [Cicer arietinum])

HSP 1 Score: 112.1 bits (279), Expect = 1.1e-21
Identity = 87/212 (41.04%), Postives = 117/212 (55.19%), Query Frame = 1 

Query: 1   MDHSIAEMSCVLSASVQCEACTAKVQEILQNIYGIYTITMDSDDGSVRICGRVNPRTFLK 60
           M++S AEM CVL  +  CEAC  KV +ILQ I G+Y IT+D +DG+V++ GRVNP T L 
Sbjct: 1   MEYSSAEMICVLKVNTDCEACKVKVMQILQRIRGVYNITIDGEDGTVKVNGRVNPNTLLN 60

Query: 61  VIEKSGKHAEVKSIRFDGEAGDRRYYPYGDDPI-HHPYQNSQ----------EQSRWFDT 120
           V+EK GKHAEVK ++FDGE  +R    YG+    ++PY + +           Q + +  
Sbjct: 61  VLEKYGKHAEVKYVKFDGEVVERNPNYYGEHGYNYNPYDSMEYFSYPPPLPCPQHQGYHH 120

Query: 121 AYPH---QPPLPPQP-YPWQFMLPQP-----QPQPQPQPQP-----QPQPQPQPVPWSMI 180
            YP+    PP+PP P  P+QF  PQP     Q  P P P P     QP P P P P+   
Sbjct: 121 HYPYFSQPPPMPPPPLVPYQFPPPQPPLVPCQFPPPPPPGPLWGPTQPTPPPPPRPYGYG 180

Query: 181 GPG----GPPGNPAPEEPSQDNNNNQRCCTIM 184
            P      PP N   +E ++ NN N+  C +M
Sbjct: 181 PPPMTSFYPPHNLPQDEYTRQNNPNK--CAMM 210

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g07870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG14g07870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L264_CUCSA8.1e-3762.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G047760 PE=4 SV=1[more]
A0A061F4U0_THECC3.0e-1539.10Spo11/DNA topoisomerase VI OS=Theobroma cacao GN=TCM_030659 PE=4 SV=1[more]
A0A0D2SIS5_GOSRA1.1e-1233.89Uncharacterized protein OS=Gossypium raimondii GN=B456_009G449700 PE=4 SV=1[more]
U5GSR0_POPTR3.1e-1235.92Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s37530g PE=4 SV=1[more]
A0A087H945_ARAAL9.9e-1139.24Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G142100 PE=4 SV=1[more]
BLAST of Cp4.1LG14g07870 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G06130.12.8e-1244.44 Heavy metal transport/detoxification superfamily protein [more]
AT3G05220.11.8e-1137.97 Heavy metal transport/detoxification superfamily protein [more]
AT5G19090.12.3e-1142.86 Heavy metal transport/detoxification superfamily protein [more]
AT3G13140.19.8e-1031.74 hydroxyproline-rich glycoprotein family protein[more]
AT5G27690.18.3e-0940.98 Heavy metal transport/detoxification superfamily protein [more]
BLAST of Cp4.1LG14g07870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659096307|ref|XP_008449024.1|1.8e-5867.20PREDICTED: uncharacterized protein LOC103491020 isoform X2 [Cucumis melo][more]
gi|778675787|ref|XP_004151526.2|2.6e-5767.20PREDICTED: uncharacterized protein LOC101203275 [Cucumis sativus][more]
gi|659096305|ref|XP_008449023.1|4.7e-5458.80PREDICTED: uncharacterized protein LOC103491020 isoform X1 [Cucumis melo][more]
gi|700200882|gb|KGN56015.1|1.2e-3662.00hypothetical protein Csa_3G047760 [Cucumis sativus][more]
gi|502099047|ref|XP_004491376.1|1.1e-2141.04PREDICTED: leucine-rich repeat extensin-like protein 1 [Cicer arietinum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
Vocabulary: INTERPRO
TermDefinition
IPR006121HMA_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process
biological_process GO:0007127 meiosis I
biological_process GO:0030001 metal ion transport
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g07870.1Cp4.1LG14g07870.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 16..68
score: 2.
IPR006121Heavy metal-associated domain, HMAPROFILEPS50846HMA_2coord: 8..71
score: 9
IPR006121Heavy metal-associated domain, HMAunknownSSF55008HMA, heavy metal-associated domaincoord: 14..71
score: 1.8
NoneNo IPR availableGENE3DG3DSA:3.30.70.100coord: 14..71
score: 1.2
NoneNo IPR availablePANTHERPTHR22814COPPER TRANSPORT PROTEIN ATOX1-RELATEDcoord: 9..182
score: 6.8
NoneNo IPR availablePANTHERPTHR22814:SF134COPPER-BINDING FAMILY PROTEIN-RELATEDcoord: 9..182
score: 6.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG14g07870CmoCh16G010110Cucurbita moschata (Rifu)cmocpeB308
Cp4.1LG14g07870Cla004455Watermelon (97103) v1cpewmB203
Cp4.1LG14g07870Csa3G047760Cucumber (Chinese Long) v2cpecuB213
Cp4.1LG14g07870MELO3C014100Melon (DHL92) v3.5.1cpemeB185
Cp4.1LG14g07870ClCG10G004210Watermelon (Charleston Gray)cpewcgB194
Cp4.1LG14g07870CSPI03G04050Wild cucumber (PI 183967)cpecpiB216
Cp4.1LG14g07870MELO3C014100.2Melon (DHL92) v3.6.1cpemedB232
Cp4.1LG14g07870CsaV3_3G004050Cucumber (Chinese Long) v3cpecucB0256
Cp4.1LG14g07870Bhi11G000356Wax gourdcpewgoB0276
Cp4.1LG14g07870CsGy3G004040Cucumber (Gy14) v2cgybcpeB326
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG14g07870Bottle gourd (USVL1VR-Ls)cpelsiB179
Cp4.1LG14g07870Bottle gourd (USVL1VR-Ls)cpelsiB174
Cp4.1LG14g07870Watermelon (97103) v1cpewmB214
Cp4.1LG14g07870Silver-seed gourdcarcpeB0010
Cp4.1LG14g07870Cucurbita pepo (Zucchini)cpecpeB251
Cp4.1LG14g07870Cucumber (Gy14) v1cgycpeB0026
Cp4.1LG14g07870Cucurbita maxima (Rimu)cmacpeB345
Cp4.1LG14g07870Cucurbita maxima (Rimu)cmacpeB814
Cp4.1LG14g07870Cucurbita moschata (Rifu)cmocpeB768