Cp4.1LG14g07580 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG14g07580
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPolygalacturonase
LocationCp4.1LG14 : 5927912 .. 5938608 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTGGATCCGTAGTGTTTATTACTATACTACTTTGCCTTTACCAATCTTATGCTCAAAGTAAAGTGTTCGATATTACGCAATATGGTGCAACACCGGATGAAAGCATAGATAGCACTAAGGTACCTTCAAAATTTTAATTTTGAGCTATTTTGGTGAAACATTCTAATGTTACACAAATCTTCAATGTATGTGAGTATTAAATATGTAGGGTTTGAGTATGGCATGGAGGGATGCGTGTGCAAATAAGGGAGGTGGTGTGGTTTTAGTACCATCAATAGGGAGGTTCTTGGTTTTGCCCGTGTTGCTTCAAGGTCCTTGCAATGGCCTCATTCAACTTCAAATTAATGGTGATCTCTTGGCTTCTTCGGACAAGGCTTTCGCCACAGGTTACTCTTGGTTCAAATTCTATCGAGTCACCAACTTGGTCATCCAGGGTCTAGGCCGCTTCCTTGGCCAAGGTGAAACCTCTTGGCCTTACAATACCTGCAAACATGGGCCATGCACTCGCCTTCCTATTGTGAGTCTATAAGCTATCATTTGTTTGTGATATATTTATTGTAATATAACGTTTGATTTCTCGTACACTATAAATCTTCAATCAATCGACATTGTGAGGATTACGAACATAACATCGTTAAATAGCAAGCTCGGCCATTTCAAAGTGCATGGATGCAACGACGTAGTGTTTGATAATGTTACAGTGATAGCACCAGAAGACAGTCCTAACACGGATGGCATCCATATTTCCAAGTCGACGGGTGTCACCATTATGAACTCAATCATCTCCACCGGAGACGATTGCATCTCCTTTGGCCCTGGAAGTAAGGATGTTAACATAACTAATGTTCATTGTGGTCCTGGCCATGGAATTAGTATCGGCAGTCTTGGAAAGTACCAAAATGAACCAAATATCGATGGAATCACAGTACGGGACTCCCAATTCGTTGGCACGAAAAATGGTGTTCAGATCAAAACATGGTCAAAATCATATCCAAGTGTGGTTAGCAACCTTACATTTGTGAATCTCAAAATGTATAATGTTGAAAGTCCTATCATGATCGATCAGAACTATTGCCCGCACAATGCTTGCCATAACAATAAAGTGGTACGAATCTTGACATTTGTTGGGCTTCGATCAAAGTTGATATTACATTATAACGAATGATTCTAAATCAAAATGTGAATGATTGCAGAGCGTGTCAAGAATACAAATCAAAGACGTCAAGTATGAAAACATAAGGGGAACATCAGCGAAACAATTGGCGGTAACTTTGAATTGCAGCCAAGTTGTTCCATGCCAAGGTATAGCGCTAAACAACATCAACCTAGTCTTCAATGGCAGTGGCTCTTCAACTTCCGTTTGTCAAAACATCCAGGGTTCTGCTTCTGGCCCTCAATTACCTCCCTCTTGTCTTTAATAATTTTCATGTCCCTAATTTTTTGTGGGAACCTCTCAAAGAAATTTCAAATGAGAGAGAATTCAACGTCTTTTTGTAGCCATCTAGCAGTCCAATCTTCTTTTGTTTTTAAATTTTGCTATAATGTCTAAGTATACAAGTTGAATGTCTAAGTTGTTAGGAAGAGAAACTTCACATTAGTTTGATATTATTCACTTCTAGCAAATAAATTCTAATTATTTTGCTCCTTCCTTCAAAAGGCCTCCGGAAATAGTGTCTCACTTGTACCAATGACCTAATTTTAGAAATACAACAAGTGGGAAATGCCTATTCAATGCTCAACCATTCATGCTTGATGTTGTTAGAAAAAGGTGGTGGTAACTTATTGGAATGGATGGGATGAAAGTTTTTTTTTTTAAGTTCTAGGAAGTTTTGATTTAGGTTCTAGAGTTACGAGCTTCTTAAAAGGCTTTGAAATTTCAAGTAGTTCTTTTCATTGTCGGGGTTTGGATGTTGTTCTCCTTTGTTGTCATATATTGGACAACTTTACTTAACTCTAGGTTAAAACTCTCTTCTATGTTCTCAAACTTAGTAGGATGTTGTTCTCCTTTGTTGTCATATATTGGACAACTTTACTTAACTCTAGGTTAAAACTCTCTTCTATGTTCTCAAACTTAGTAAGCTTACTTTGCCTTGTAGTACGTGCAGGTTGACAAATATGGTCGGACATTGGATTGCTTTGAGTTGGATTGCTTTGGGTTGGATTGTTTTGGGTCGTAGGTCCTAGGTCGTATGTACATCTAGATTGGGAAGTTTTGTGGGTGGCTACGACAAGTTTGGGCCACAGGTAGGTGCACTTAACTTTCTAACGAATTCTAGATCCAGGTTAATCCAACTTGAAACTAACCTCGTGGATTCCTTCTTCCTCATCTTATTCGCTGAGTTTCTTTCTCATTTTCTCTCTCTATCTTCGTACACACGCATCCGTTCTCCATCTCCTTTATGAAGACGGCTGATACACCCTCTTTTCACCACTAGCTTCAATTTTCTCCCTCTATGGTCGAGACAACACGAACTACTACACAAGATGGTAGCTATGATATAAAATAAGGAAGCTCGAACCCTCGTCTCCATAGATCCTTTTTGGATCAAGTAAGAGAAACGAAGGCTTATCGTCTTGATTTCTTATCATGGTTCTTCGTTTCGATTTTTGTATGATCTTCCTTCACCGCCCTAAAAAAAATATCACGTTAATGGGCCTCTCGGATGACAAACAAAATTCTCTCTCTTTCGAAGATGTGGAAGATGTGTGGATCTTGATGAGGTTCGAAAATTTCTTGGTGGTTGAGGGTGTGAGGTGTTAATATCACCTAGCCCAATAGGGTTAAGCCCTTGCCTATAATCTAATATAAATACCCTCTACTCTAGTTAGTTTATCATCCCAAGAAATACGAAGCACAGAATGCAGTAGTAGAGTGTGTTGTAATCTTTTCTCGATTGGTCTTAATAAACTATGCAAGTGTTTCCCACAAAAAGTTGTGTTCAATAATCTGGTATCAGATCGAGATTAGTGTATGTTATCTGATCTCTTGGAATTCTTAGTATGCTTTCTGGTTGCAGCTTTGTCTGATCTTCCATTTCATAAACGATTTCTTGAGTTTATTAGTGTGTGAGTTTCTTTAGTGTTGTGAGTAGTCTGTGACTCTGCAAGTCTTGTGTCGAAAGAGCTTGTTTGGTATTACTGAGGTATAGCCAACACGATGAATGATTTTCAAATCGTGGAGGATTCAAGAAACTCAACAACAACTACAATACGTGGGCAACATGCATGATGTTCTATTTACAAGGACATGATCTTTGGGAGATCATTGGCAGGAGTGAAACTACGCCACTAGAGGATGATTCTAACGGCTCCTTGTGCAAATGGAGAATCAAAGAAGGCAAAGCAATGTTTGCCTTGAAGACTCCAATCAGAGAAGAGATGTTAGAGCACATTTGGGATGACAAGACACCTAAAGAAGCATGGGACACGTTCTTGATGTTGATCTCAAAGAAGAATAATACGAGGCTACAACTGTTGGAGAATGAGTTGTTGTCAATTTCACAATAAGACATGACGACTGCTCAGTACATCCACAAGGTCAAGTCGATTTATCGGGAGATTACTGAACTAGACTCGAAGTTCGCCATTGTAGAATCTTGAATGAAGAGGATTATACTCCACGGATTGCGACCAGAAAATTGAAGCTTCATATTTGCTGTTCAAGGATGGCCCACTCAACCATCACTTGTAGAGTTCGAAAATTTGTTAGCTGGCCAAGAAGTCATGGCTAAACAAATAGGAGGCATCACATGGAAGGGTGAAGAAGAAGCACTCTACACAAGTGAAAGTCGGAGCAATTATAGGCCGTCTACAAAACGTGGATACAAAAATGGTGACAAAGGAAGAAGTCGTCAAGGAGCTGCACAACCTGGAAGAACTCAGAAGAACAATAACCAAAGTTCTCAAGGGAAGAGATTTGAAGGCATCTCCTACAATTGCAGGAAAAATGATCACATGTTCGAGGATTGTTGGTCCAAGAAAAAAAATCTGTCCAAAGCAATGTGACATCCTCCAACATGAAGATGGAGGATGAATGGGATGCAAAGGTATTATGTCTCATAGAAGAGGACGAGCTAGTGCTCATAGCGATGATGGAGGAATATATCGATTACGAGGATGACTGAATCATTGATTTAGGATGCTCAAACACACGACTGACGATGAGAAATTGTATGAAAATAGACTGTTATGATAGGTTCCATTCATGAAATTGTATGTGTTTGCATTTAACCCCAATAGTGGGGTCAGTTACTTAGTATTTGTTTAGATACTTAAGCCACGTGCTACTTCTATTTCAGGTCAATGCAAGACATCCCTGGACAACTGACGATGGCATCGCGACTCGGGACCATTGCACATGCATAGGTAGTCGTATTTATTTTCACAGATATAGGCTAGAATAAGATGTTTTTAATTTAAACGTTTATTTATTTTATTTAGTCTTTTGTTGTGTCGTTTTAAGGATGTTTTTGAACACGTAAGTCCATGCGAGTATTTTAAGATAAAGTTTCTATTTTATGAAGAAGTTTAAACATTATTTTTGCATAAAAAGGATTACGTTATCATTATAACGACGGTAGGTAAGTAGAAATCTAGTCATATTTTGGTGATCTCACTGAATAAATTGTCCAATAAAAGCTACATATCATGAATTTAAGAAAAATGATCACTTTTTTATTCATATGTTCCATTTTTTTTTATTTCATATAATTGTTAATAATCTGATAATCTCATACTTCAAATAATCGGAAACAAGTTATCTTTGTTGTAAAATATCGAGATCGGAAAAAACATAGATAAATTGCAATAATGAGTAAGATCTAATTGCCTTATAGGTACATATATCTAAGCATCTATTTATGGTAATAAAATAAAAATAAAATACATATATACCTAATCTATTAAAACATAATTCGAATAGGAAATAAATCTATTTGAAATAATCTCATCTAATATACACTAGCATTTAGTTTTTTTTCGAGAGATACCATCATTTATGATTACTATAGAATAGAAATGTCACTCTTTTTAGTTGAATATGGTTGAATTGATTGAGACTTATTTTCCGAGTCAATAAAATTGACTTAAAATAAGACTTATTTTTTATGAAATTTTAAGATAATTGTTATGGATAAAATTTAGGAAAACGAGCTTATTTAGTACAAAGAAAACTCTTATCAACCCCTCAAGTTAGTCTCTTCCTACTTCCATTATTCGCTTTGGTGTGCTTGGATGGATGGTCAAAGCCAACATATGGGAGTAGAGTTAGGGTGTCAAAACAAATGTCGTCGTCACAAAAACTCGTTGGAGGAGATGTGACAACAATAAAAAGTAAAAAATGTAATAGCGATTCCCGAAAAGGTATTAAGTACTTGTTTGGCCTTAGTCAGTGTTCTCCGTAATTATTATACGTTAGCTCCCGTTCCTTCAAACCTGCCCCAAGTGTCGTGAGGGTAAGTTTCCTATTAAATTTTTTGTCCCTTTTGATAGTATTTCCAAATTTAATAAAAATCTAACTGACATATGTGAAATACAACACTAAAACTACCTCAATTACCTTAATCGAGGCCAAAAATAGGTTTAGGAGGATGGAAACGGTGAAAATCGTGGTGAAATTGGGATACTTGAGCTAGATAAGCAGAAAGAGACGCGGAAGTTGAGCCAAGCCTTGCCAAGCCGCAAAGTCGAATGGTTATTTTTGTGCAGGTCGACACACGGCAGGACGTGAGTGGGCCATGTCATGTGCAGGTCGAGGGTCGCGGTCACAGGTGCTCGTGTCGAGGCGTTGCAAGCGTGGGCCACTGTAGTGGATTGGGCCGAAGGGTTGGTCCAGGCCTCAAGTTTTCGTGGGCTGCAGGCGCGGATCTCGGGTGTGTGATGCGAACGAAGGTTGTTCCAAGTTTAGGCCAAATCGTTTGGACTGGTTGCTAGGCCACAGAGAACGATCGGTGAGTGGGTTACGAGTTGAGTCCGAATCCGAATCTGTTGGATCCTTTCTTCTTCACCTGATTCGCAGCGTAATTTTTTGGTGACCTTTCTCTCTCCTCTGTTCGTTGTTTCTGATACCGATTTCTGTCCTTTTTCTTCCTCTACTTCTCTATTCGTTTCCGCGTGGGTCGCAACAATTCTGGCAGTCGTTGAAATTTTCGCGTCCACCAGTGACGGACGCAAATTATGTTTTTATTTTTTTATTTTTATTTTTTTTTTTAATGAAACTTTATATTATTTTATCTAAATATCTAAAAGTAAATTTAACATCAAAATTTTGCAAATTTAATTTGAAACTACCTTTTGTATTATTTTATTGTAATTTCGGAAGTACATTAAAAATAATTTAAAAAGATTAAAACTAACTTCCCAACTAATAAAATTGAAAATTTAAAACTTGAGCTATTTTGGTTGAAAGTAGATGATAAAAGGTTACTTAGTTTGTATAGGCATTAAGTGGGGCATGGAGGGAAGCTTGTAGACATAACCGACATGGTATAGTTTTAGTATTAGCAGGGAGCCTTTTGATTTTACCGTTAGTGCTTGAAGGTCTATGCAAAGGATCCATTGGTCTGCTTATTAATGGTGAATTGTTGGCTTCTGTCAGCAAGAATTTCGCCACCGGTAAATACTAGCTGAGTATCTCCAAAGTCGGCAATTTTTTCGTTGACGGTTCTAGAAGCTTGAACGGTGGCGATTCTTCAGCTTGGCATTCCTACACTTCTAACCGTCCAATTGTAAGTCCATTTTTGTGTTTGTGATGAAAAAGAAATTGATTTGTTAGATTGATAGTTAAATGATGCTATCATTTTACATTTAAAAATTTACCAAAATAGACATATTTATAATCCAACAATTGATGCAATGTAGTGGATAGACATATTTATAATCCAACAATTGATGCAATGTAGTCGATGAAACTTTCTAGTGTCAACACTGCGAGAATTTCAAAGATAACATCGTCTAATAGCAAATTCTTCCATTTTGGTGTGCATAAATGTCGTGATACAATCATAGCTCCAGCAGATAGCCCAGTACAGACGAAATTCACATTTTCAAGTTAAGTGGTATCAATATTATGCATTCGGTGATTCGCACGGGAGACGATTGCATCTCTCTAGGCCTAGGAAGTAAATTCATCAACATAATAGACATCCAGTGTGGTCCAGGTCATGGAATTAGAATCGATAGCCTCGGAAAGTACCCAAATGAAGAAGATGTCTCTGAAGTCACAATAAGAGACTCTACATTCATTGTCATAGACAACGGTGTGAGGATCAAAACATGGTCAACTTCATTTTCTAGTTCTGTTAGCAAGATTGCTTTTCTCGATCTCTAAATGAAGGATGTAAAAAATCCTATCATCATTGATAAAAAATATTGCATTGACTGCGACGACTATAAAATGGTATATATATTTAAATTTGATAGTCATTCCGTTTTAATAAAACTATAAATGGTGAATGATTCTAAAGTAAAATGTAGTTTGTGGTTGACCGAGTAACTCAAAAGTGCAGATTCGAGACATGAGATATGAAGGCATAACGGGGAGTTTAACATCCCAAGTGGCAGTATGTTTTGAATGCAGCCAAGTTCTTCCATGCGAAGGCATAGTGTTACAAGACATTAACCTCTCCTTCAAAGGTGATGGCGAGCCAACTTCCATTTGTCACAATGTGAAGGGCTCTGCTTTTGGCAAACAAATTCCTTCCTCTTGCCTTTAATTACTTTGTGTTTTTTTTTTCTTCCTTATAAGAGTGGCTGGCCGAAGAAGGATTAGATATACATCCATCCCATCGATCTTTCTTCTATTATCCTATGGATTAAGAATTTGATTATATTAGTTCTTGTTATTTTGATAACCCTACAAAATTTATAAACACAGCTCAATTCAATAGATTATCACTTTTTAGTTTATACTTTTTCTCTCTATTCTTATTCTACACAACGCAGAACTTAAGAATCCCAAATGAATTGGCTTATTGGAAAAGAGTGGATAAGGTTTTTGTTGCGGGTTGCTTCCACGCTTGGAATGCACCGTTGGGTTCAAACATGGCAAGCCCCCCATCGTGCATGATTGTGGGTTGAATGTTGAAGCTGGTTCATTGGTTTGCAACTCGGTCCTATTCCATTCAGCCTTGTTCTATGGTTTTTTATCTGGCCTCTTTCTAACCTACCAAATACAAAATTTTAAGATAGGTTAATTTTATTTAGTTTGTGTTGTTTTAGAGATGTTTTTGGATACGTAAGTTCATAATAGTATTTTAAGATAAAGTTTCTATTTTATGAAGAAATTTAAACATTATTTTTGCATAGAAAGGATTACGTTATCATCGTAGCGACTCTAGATAAGTAGAAATCTAGAGTCGTTACAGTAAGTCATATTTTGGTGATCTCACCAAATAAATTTTCCAATATAAGCTACATAGTTAAGAATTTCCATTTTATTTGATTTCATATAACTTTTAATAATCTAATAATTTCATACTTCAAATAATTTGGAAACAAGTTAGTTAGTTTCAAATAAAATAGTGAATGGGTAAGGTTTAAATGCCTAATAGATCTAAGCATCTCTTTATGGTAATAAAATAAAATTAAAATGCATATACACATGATCTATTGAAACATAATTGGAATAGAAAATAAATCTATTTGAAATAACCTCTTTTAAATGTTCTGATAATATTTTTTAAGCTTGTACAAAAATTTATCATATTATCATAGTTAGTCATATCGAGATCCTTGAATCAAAATCTCGAAAACTAAGGTGTGACAATTGTTTTTGTAGACTTTTGAGTATGATATTGAGTCAATCATATACAAATAATAGATTAAGAACTACTAGCAAGGAGTTCTATATTTTTCCAAAGTGGTTGTTATGGCTCCATTGTTAAATTAATGGAAATCTCTTAACTTCGTCCCACAAATTTAGTAATCTCTAGAACCGTTAAGAGTTTTAAGAAAGAGAGGAGAATTAGGAATATAAGAAAGATGTTTTTCCTTAAAGGCTTGATTGACATAAATTTTAATTTGAGAGTTGCAATAAAAGAATAAAATCTGAGTTGCCCTTCCGTTTTTGGATGTTAAAATTTTGTTATAAAAGTGAAGCAAAGTAGATAACAAAAATAAGACATCTTAGATAGAAAAGACAAAAATGAGTTTGAATTCATGTTTAGTGTTTTTTATCATCTTACTTTCCATTCCTAAATGTTATTCCCAATCTAAAAAGTTCAATATCATCCAATTTGGTGCAACAGCGGATGGAAAAACGGATAGCACTAAGGTAAAATTTTTCTTTCTAATAAACCATAAAAACGTTCAAAACTCAACTCAAACAACCTTTTGTTCTGTATTTACATACTCTTAGGTAACCTTTTTATTTTTCATTTTAATTTTTCTTTTAAGTTATTTTGTTGAAAGTACATCATAAAAGGTTACTTGGTTTGTATAGGCATTAAGTAGGGCATGGAAGGAAGCTTGTGGACATAACGGACATGGTATAGTTTTAGTACCAGCGGGGAGCTTTTTGGTTTTACCGTTAGTGCTTGAAGGTCCATGCAAAGGATCCATTGGTCTGCTTATTAATGGTAAATTGTTGGCTCCTGTCAGCAAGAATTTCGCCACCGGTAAATACTGGCTGAGTATCTCCAAAGTCGACAACTTTTTCGTTAACGGTTCTGGCAGCTTGAACGGTGGCGGTTCTTCAGCTTGGCATTCCGATACTTCTAACCGTCCAATTGTAAGTCCATTTTTATATTTAAGTGATAAAAAAGAGATTGATTTGTTAGGTTTATAGTTAAATGATGCTATCATTTTACATTTAAAAGTATACCATAATATACATATGTATAATCTAATCTAACGTTTGATTCAATGTAGTCGATGAAACTTTCTGGTGTCAACACTGCGAGAATTTCAAAGATAACATCGTCCAATAGCAAATTCTTCCATTTTGGTGTGCATAAATGTCGTGATGTCACGTTTGATCACGTTACAATCATAGCTCCAGCAGATAGCCCCAATACAGATGGAATTCACATTTCCAAGTCAAGTGGTATCACTATTATGCATTCAGTGATTGGCACCGGAGACGATTGCATCTCTCTAGGCCCTGGAAGTAAATTCATCAACATAACAGACGTCCAGTGTGGTCCAGGTCATGGAATTAGCATCGGTAGCCTCGGAAAGTACCCAAATGAAGAAGATGTCTCTGAAGTCACAATAAGAGACTCTACATTTGTTGGCACAGACAATGGTGTGAGGATCAAAACATGGTCAACTTCATTTTCTAGTTCTGTTAGCAAGATCGCTTTTCTCAATCTCGAAATGAAGGATGTAAAAAATCCTATCATCATTGATCAAAAATATTGCACTGATTGCGACGAACATAAAATGGTATATATATTCAAATTTGATAGTTGTTCGATTTTAGTAAAACTATAAATGGTGAATGATTCTAAAGTAAAATGTGGTTTGTGGTTGACAGAGTAACTCAAAAGTACAGATTAAAGACGTGAGATATGAAGGCATAATCGGGAGTTCAACATCCCAAGCGGCAGTAAGTTTTGAATGCAGCCAAGTTTGTTCATGTGAAAGCATAGTGTTACAAGACATTAACCTCTCCTACAAAGGTGATGGCGAACCAACTTCCATTTGTCACAATGTGAAGGGCTCTGCATTTGGCAAACAACTTCCTTCCTCTTGCCTT

mRNA sequence

ACTGGATCCGTAGTGTTTATTACTATACTACTTTGCCTTTACCAATCTTATGCTCAAAGTAAAGTGTTCGATATTACGCAATATGGTGCAACACCGGATGAAAGCATAGATAGCACTAAGGGTTTGAGTATGGCATGGAGGGATGCGTGTGCAAATAAGGGAGGTGGTGTGGTTTTAGTACCATCAATAGGGAGGTTCTTGGTTTTGCCCGTGTTGCTTCAAGGTCCTTGCAATGGCCTCATTCAACTTCAAATTAATGGTGATCTCTTGGCTTCTTCGGACAAGGCTTTCGCCACAGGTTACTCTTGGTTCAAATTCTATCGAGTCACCAACTTGGTCATCCAGGGTCTAGGCCGCTTCCTTGGCCAAGGTGAAACCTCTTGGCCTTACAATACCTGCAAACATGGGCCATGCACTCGCCTTCCTATTAGCGTGTCAAGAATACAAATCAAAGACGTCAAGTATGAAAACATAAGGGGAACATCAGCGAAACAATTGGCGGTAACTTTGAATTGCAGCCAAGTTGTTCCATGCCAAGGTATAGCGCTAAACAACATCAACCTAGTCTTCAATGGCAGTGGCTCTTCAACTTCCGCATTAAGTGGGGCATGGAGGGAAGCTTGTAGACATAACCGACATGGTATAGTTTTAGTATTAGCAGGGAGCCTTTTGATTTTACCGTTAGTGCTTGAAGGTCTATGCAAAGGATCCATTGGTCTGCTTATTAATGGTGAATTGTTGGCTTCTGTCAGCAAGAATTTCGCCACCGTCGGCAATTTTTTCGTTGACGGTTCTAGAAGCTTGAACGGTGGCGATTCTTCAGCTTGGCATTCCTACACTTCTAACCGTCCAATTATTCGAGACATGAGATATGAAGGCATAACGGGGAGTTTAACATCCCAAGTGGCAGTATGTTTTGAATGCAGCCAAGTTCTTCCATGCGAAGGCATAGTGTTACAAGACATTAACCTCTCCTTCAAAGGTGATGGCGAGCCAACTTCCATTTGTCACAATGCATTAAGTAGGGCATGGAAGGAAGCTTGTGGACATAACGGACATGGTATAGTTTTAGTACCAGCGGGGAGCTTTTTGGTTTTACCGTTAGTGCTTGAAGGTCCATGCAAAGGATCCATTGGTCTGCTTATTAATGGTAAATTGTTGGCTCCTGTCAGCAAGAATTTCGCCACCGGTAAATACTGGCTGAGTATCTCCAAAGTCGACAACTTTTTCGTTAACGGTTCTGGCAGCTTGAACGGTGGCGGTTCTTCAGCTTGGCATTCCGATACTTCTAACCGTCCAATTAGTAACTCAAAAGTACAGATTAAAGACGTGAGATATGAAGGCATAATCGGGAGTTCAACATCCCAAGCGGCAGTAAGTTTTGAATGCAGCCAAGTTTGTTCATGTGAAAGCATAGTGTTACAAGACATTAACCTCTCCTACAAAGGTGATGGCGAACCAACTTCCATTTGTCACAATGTGAAGGGCTCTGCATTTGGCAAACAACTTCCTTCCTCTTGCCTT

Coding sequence (CDS)

ACTGGATCCGTAGTGTTTATTACTATACTACTTTGCCTTTACCAATCTTATGCTCAAAGTAAAGTGTTCGATATTACGCAATATGGTGCAACACCGGATGAAAGCATAGATAGCACTAAGGGTTTGAGTATGGCATGGAGGGATGCGTGTGCAAATAAGGGAGGTGGTGTGGTTTTAGTACCATCAATAGGGAGGTTCTTGGTTTTGCCCGTGTTGCTTCAAGGTCCTTGCAATGGCCTCATTCAACTTCAAATTAATGGTGATCTCTTGGCTTCTTCGGACAAGGCTTTCGCCACAGGTTACTCTTGGTTCAAATTCTATCGAGTCACCAACTTGGTCATCCAGGGTCTAGGCCGCTTCCTTGGCCAAGGTGAAACCTCTTGGCCTTACAATACCTGCAAACATGGGCCATGCACTCGCCTTCCTATTAGCGTGTCAAGAATACAAATCAAAGACGTCAAGTATGAAAACATAAGGGGAACATCAGCGAAACAATTGGCGGTAACTTTGAATTGCAGCCAAGTTGTTCCATGCCAAGGTATAGCGCTAAACAACATCAACCTAGTCTTCAATGGCAGTGGCTCTTCAACTTCCGCATTAAGTGGGGCATGGAGGGAAGCTTGTAGACATAACCGACATGGTATAGTTTTAGTATTAGCAGGGAGCCTTTTGATTTTACCGTTAGTGCTTGAAGGTCTATGCAAAGGATCCATTGGTCTGCTTATTAATGGTGAATTGTTGGCTTCTGTCAGCAAGAATTTCGCCACCGTCGGCAATTTTTTCGTTGACGGTTCTAGAAGCTTGAACGGTGGCGATTCTTCAGCTTGGCATTCCTACACTTCTAACCGTCCAATTATTCGAGACATGAGATATGAAGGCATAACGGGGAGTTTAACATCCCAAGTGGCAGTATGTTTTGAATGCAGCCAAGTTCTTCCATGCGAAGGCATAGTGTTACAAGACATTAACCTCTCCTTCAAAGGTGATGGCGAGCCAACTTCCATTTGTCACAATGCATTAAGTAGGGCATGGAAGGAAGCTTGTGGACATAACGGACATGGTATAGTTTTAGTACCAGCGGGGAGCTTTTTGGTTTTACCGTTAGTGCTTGAAGGTCCATGCAAAGGATCCATTGGTCTGCTTATTAATGGTAAATTGTTGGCTCCTGTCAGCAAGAATTTCGCCACCGGTAAATACTGGCTGAGTATCTCCAAAGTCGACAACTTTTTCGTTAACGGTTCTGGCAGCTTGAACGGTGGCGGTTCTTCAGCTTGGCATTCCGATACTTCTAACCGTCCAATTAGTAACTCAAAAGTACAGATTAAAGACGTGAGATATGAAGGCATAATCGGGAGTTCAACATCCCAAGCGGCAGTAAGTTTTGAATGCAGCCAAGTTTGTTCATGTGAAAGCATAGTGTTACAAGACATTAACCTCTCCTACAAAGGTGATGGCGAACCAACTTCCATTTGTCACAATGTGAAGGGCTCTGCATTTGGCAAACAACTTCCTTCCTCTTGCCTT

Protein sequence

TGSVVFITILLCLYQSYAQSKVFDITQYGATPDESIDSTKGLSMAWRDACANKGGGVVLVPSIGRFLVLPVLLQGPCNGLIQLQINGDLLASSDKAFATGYSWFKFYRVTNLVIQGLGRFLGQGETSWPYNTCKHGPCTRLPISVSRIQIKDVKYENIRGTSAKQLAVTLNCSQVVPCQGIALNNINLVFNGSGSSTSALSGAWREACRHNRHGIVLVLAGSLLILPLVLEGLCKGSIGLLINGELLASVSKNFATVGNFFVDGSRSLNGGDSSAWHSYTSNRPIIRDMRYEGITGSLTSQVAVCFECSQVLPCEGIVLQDINLSFKGDGEPTSICHNALSRAWKEACGHNGHGIVLVPAGSFLVLPLVLEGPCKGSIGLLINGKLLAPVSKNFATGKYWLSISKVDNFFVNGSGSLNGGGSSAWHSDTSNRPISNSKVQIKDVRYEGIIGSSTSQAAVSFECSQVCSCESIVLQDINLSYKGDGEPTSICHNVKGSAFGKQLPSSCL
Homology
[Close]
BLAST of Cp4.1LG14g07580 vs. Swiss-Prot
Match: PGLR_ACTDE (Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 4.1e-23
Identity = 99/362 (27.35%), Postives = 159/362 (43.92%), Query Frame = 1 

Query: 20  SKVFDITQYGATPDESIDSTKGLSMAWRDACANKGGGVVLVPSIGRFLVLPVLLQGPCNG 79
           SK  ++  +GA  D   D TK    AW+ AC++    V+LVP    +LV P+   GPC  
Sbjct: 87  SKTVNVDDFGAKGDGR-DDTKAFEKAWKAACSSTSSAVLLVPK-KNYLVRPISFSGPCKS 146

Query: 80  LIQLQINGDLLASSDKA--FATGYSWFKFYRVTNLVIQGLGRFLGQGETSWPYNTCKHG- 139
            + +QI G + AS D++     G  W  F  V NL ++G G   G G+  W  N+CK   
Sbjct: 147 GLTMQIYGTIEASDDRSDYRKDGRHWLVFDSVQNLRVEGGGTINGNGKIWW-QNSCKTNK 206

Query: 140 --PCTRLPISVSRIQIKDVKYENIRGTSAKQLAVTL-NCSQV--------VPCQGIALNN 199
             PC   P +++  + K V  +N++  +A+Q+ V+  NC  V         P      + 
Sbjct: 207 ALPCKDAPTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQASNLMVTAPENSPNTDG 266

Query: 200 INLVFNGSGSSTSALSGAWREACRHNRHGIVLVLAGSLLILPLVLEGLCKGSIGLLINGE 259
           I++    +   +S + G   + C    +G   V    +   P    G+  GS+G   +  
Sbjct: 267 IHVTGTQNIHISSCVIGT-GDDCISIVNGSRKVRVNDITCGP--GHGISIGSLGYGNSEA 326

Query: 260 LLASVSKNFATV-GNFFVDGSRSLNGGDSSAWHSYTSN-------RPIIRDMR------- 319
            ++ V  N A + G       ++  GG  SA +    N        PII D         
Sbjct: 327 HVSDVVVNGAKLCGTTNGVRIKTWQGGSGSASNIKFQNVEMHNVENPIIIDQNYCDQDKP 386

Query: 320 --------------YEGITGSLTSQVAVCFECSQVLPCEGIVLQDINLSFKGDGEPTSIC 339
                         Y+ I G+  S VA+ F+CS+  PC+GIVL+D++L  +G     ++C
Sbjct: 387 CQEQSSAVQVKNVVYQNIKGTCASNVAITFDCSKRFPCQGIVLEDVDLEIEGGAAAKALC 442

[Close]
BLAST of Cp4.1LG14g07580 vs. Swiss-Prot
Match: PGLR1_ARATH (Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 5.0e-21
Identity = 94/342 (27.49%), Postives = 147/342 (42.98%), Query Frame = 1 

Query: 22  VFDITQYGATPDESIDSTKGLSMAWRDACANKGGGVVLVPSIGRFLVLPVLLQGPCNGLI 81
           V+DIT++GA  D S ++ K     W   C +     +LVP  G FL  PV+  GPC   +
Sbjct: 51  VYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLLVPK-GTFLAGPVIFAGPCKSKV 110

Query: 82  QLQINGDLLASSDKAFATGYSWFKFYRVTNLVIQGLGRFLGQGETSWPYNTC-KHGPCTR 141
            + + G ++A++   +AT   WF F RV NLV+ G G F G+GE  W  + C K   C  
Sbjct: 111 TVNVIGTIIATTS-GYATP-EWFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNL 170

Query: 142 LPISVSRIQIKDVKYENIRGTSAKQLAVTLNCSQVVPCQGIALN------NINLVFNGSG 201
            P S+    +K+V+   I   +AK   + L  ++ V  Q I L       N + +   + 
Sbjct: 171 PPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNA 230

Query: 202 SSTSALSG--AWREACRHNRHGIVLVLAGSLLILPLVLEGLCKGSIGLLINGELLASVSK 261
            + S L    A  + C     G   V    ++  P    GL  GS+G   N E ++ +  
Sbjct: 231 DNVSILDSTIATGDDCVSVGRGSNNVTVERVICGP--GHGLSVGSLGKYKNEEDVSGIHV 290

Query: 262 NFATVGNFFVDGSRSLNGGDSSAWHS----------YTSNRPIIRDMRY----------- 321
           N  T+     +G R    G S    +           +   PII D  Y           
Sbjct: 291 NNCTMIE-TDNGLRIKTWGGSDPSKAVDIKFENIIMQSVKNPIIIDQNYGSRGGDSQVAI 350

Query: 322 -----EGITGSLTSQVAVCFECSQVLPCEGIVLQDINLSFKG 329
                + I G+  ++  V   CS+ +PC+G+ + D+NL + G
Sbjct: 351 SDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 386

[Close]
BLAST of Cp4.1LG14g07580 vs. Swiss-Prot
Match: PGLR3_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 6.5e-21
Identity = 59/180 (32.78%), Postives = 93/180 (51.67%), Query Frame = 1 

Query: 23  FDITQYGATPDESIDSTKGLSMAWRDACANKGGGVVLVPSIGRFLVLPVLLQGPCNGLIQ 82
           FDIT+ GA+ +   DSTK +  AW  AC   G   +L+P  G FLV P+   GPC G + 
Sbjct: 41  FDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPK-GDFLVGPLNFTGPCKGDVT 100

Query: 83  LQINGDLLASSD-KAFATGYSWFKFYRVTNLVIQGLGRFLGQGETSWPYNTC-KHGPCTR 142
           +Q+NG+LLA++D   +    +W +  RV NLVI G G+  GQG   W  N+C K   C  
Sbjct: 101 IQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKI 160

Query: 143 LPISVSRIQIKDVKYENIRGTSAKQLAVTLNCSQVVPCQGIALNNINLVFNGSGSSTSAL 201
           LP S+    + + +   I   ++K   + +       C+ + + ++N+   G   +T  +
Sbjct: 161 LPNSLVMDFVNNGEVSGITLLNSKFFHMNM-----YKCKDMLIKDVNVTAPGDSPNTDGI 214

[Close]
BLAST of Cp4.1LG14g07580 vs. Swiss-Prot
Match: PGLR_PERAE (Polygalacturonase OS=Persea americana PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.4e-20
Identity = 96/373 (25.74%), Postives = 165/373 (44.24%), Query Frame = 1 

Query: 25  ITQYGATPDESIDSTKGLSMAWRDACANKGGGVVLVPSIGRFLVLPVLLQGPCNGLIQLQ 84
           +  +GA  D + D TK    AW+DAC++  G V++VP    +L+  +   GPC   ++++
Sbjct: 87  VDDFGARGDGT-DDTKAFEKAWKDACSS--GSVLIVPENKNYLLKQITFSGPCKSDLRVK 146

Query: 85  INGDLLASSDKAFATGYS---WFKFYRVTNLVIQGLGRFLGQGETSWPYNTCKHG---PC 144
           I G + ASSD++   G++   W +F  ++NL ++G G   G GET W  ++CK     PC
Sbjct: 147 IRGTIEASSDQSDWVGHNRKRWIEFEDISNLTLEGGGTSNGNGETWWD-SSCKRKKSLPC 206

Query: 145 TRLPISVSRIQIKDVKYENIRGTSAKQLAVTLNCSQVVPCQGIALNNINLVFNGSGSSTS 204
              P +++    K++   ++    ++++ ++ +      CQ +  +N+ +       +T 
Sbjct: 207 KSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFD-----KCQDVIASNLMVTAPEHSPNTD 266

Query: 205 A--LSGAWR-----------EACRHNRHGIVLVLAGSLLILPLVLEGLCKGSIGLLINGE 264
              ++G  R           + C     G  +V+A ++   P    G+  GS+G   +  
Sbjct: 267 GIHITGTQRIHVMNSVIGTGDDCISIESGSKMVIATNITCGP--GHGISIGSLG---DRN 326

Query: 265 LLASVSKNFATVGNFF--VDGSR--SLNGGDSSAWHSYTSN-------RPIIRDMRY--- 324
             A VS      GN F   +G R  +  GG  SA +    N        PII D  Y   
Sbjct: 327 SEAHVSGVLVDGGNLFDTTNGLRIKTWQGGSGSAKNIKFQNIVMHNVTNPIIIDQYYCDS 386

Query: 325 --------EGITGS----------LTSQVAVCFECSQVLPCEGIVLQDINLSFKGDGEPT 347
                     +  S            S+VAV F+CS+  PC+G ++ +INL   G  E T
Sbjct: 387 KDPCPEQESAVKVSNVAYMNIRGTSASEVAVKFDCSKSSPCQGYIVGNINLVGNGGKETT 445

[Close]
BLAST of Cp4.1LG14g07580 vs. Swiss-Prot
Match: PGLR1_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.8e-18
Identity = 51/125 (40.80%), Postives = 71/125 (56.80%), Query Frame = 1 

Query: 23  FDITQYGATPDESIDSTKGLSMAWRDACANKGGGVVLVPSIGRFLVLPVLLQGPCNGLIQ 82
           FDIT+ GA+ +   DSTK +  AW  AC   G   +L+P  G FLV  +   GPC G + 
Sbjct: 41  FDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPK-GDFLVGQLNFTGPCKGDVT 100

Query: 83  LQINGDLLASSDKA-FATGYSWFKFYRVTNLVIQGLGRFLGQGETSWPYNTC-KHGPCTR 142
           +Q++G+LLA++D + +    +W +  RV NLVI G G   GQG   W  N+C K   C  
Sbjct: 101 IQVDGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKI 160

Query: 143 LPISV 146
           LP S+
Sbjct: 161 LPNSL 164

[Close]
BLAST of Cp4.1LG14g07580 vs. TrEMBL
Match: A0A0A0L7H9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G063610 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.3e-39
Identity = 131/364 (35.99%), Postives = 177/364 (48.63%), Query Frame = 1 

Query: 196 STSALSGAWREACRHNRHGIVLVLA-GSLLILPLVLEGLCKGSIGLLINGELLASVSKNF 255
           ++ ALS AW EAC +N  GIVL+ A G  L+LPL+L+G C G I + ++GELLA + ++F
Sbjct: 13  NSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHF 72

Query: 256 AT---------VGNFFVDGSRSLNGGDSSAWHSYTSNRPIIRDMRYEGITG----SLTSQ 315
           AT         V N F+DG  SL+G  S+AW S + NRP+   MR  GI      ++ S 
Sbjct: 73  ATGDYWLSIDQVNNLFIDGLGSLDGRGSTAWPSTSHNRPV--SMRLNGINNARITNIKSY 132

Query: 316 VAVCFECSQVLPCEGIVLQDINLSFKGDGEPTSICHNALS---RAWKEACGHNGHGIVLV 375
            +  F  + +  C  +    + +    +   T   H + S          G     I L 
Sbjct: 133 NSKLFHFA-MHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLG 192

Query: 376 PAGSFLVLPLVLEGPCKG-SIGLLINGKLLAPVSKNFATGKYWLSISKVDNFFVNGSGSL 435
           P   F+ +  +  GP  G SIG L  GK        +   +    ++  D+ F+   G+ 
Sbjct: 193 PGSKFINITNIQCGPGHGISIGSL--GK--------YPNEEDVFEVTVRDSTFI---GTS 252

Query: 436 NGGGSSAWHSDTSN---------------------------------RPISNSKVQIKDV 495
           NG     W S  S+                                 + +S S VQIKDV
Sbjct: 253 NGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKMMSKSMVQIKDV 312

Query: 496 RYEGIIGSSTSQAAVSFECSQVCSCESIVLQDINLSYKGDGEPTSICHNVKGSAFGKQLP 509
           RYEGI GSS +Q AV FECS+V  C+ IVLQDINL + G G  TS CHNV+GSAFG QLP
Sbjct: 313 RYEGIRGSSNTQVAVDFECSEVVPCQGIVLQDINLPFNGGGRTTSNCHNVRGSAFGHQLP 360

[Close]
BLAST of Cp4.1LG14g07580 vs. TrEMBL
Match: A0A059AWR6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01088 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.2e-29
Identity = 109/361 (30.19%), Postives = 163/361 (45.15%), Query Frame = 1 

Query: 22  VFDITQYGATPDESIDSTKGLSMAWRDACANKGGGVVLVPSIGRFLVLPVLLQGPCNGL- 81
           VFD+TQYGA  D   D++     AW  AC N G   +++P+ G FL  PV+ QGPC G  
Sbjct: 51  VFDVTQYGAKADGKTDNSMAFVKAWNAACHNSGPAKLVIPT-GTFLSGPVVFQGPCEGSN 110

Query: 82  -IQLQINGDLLASSDKAFATGYSWFKFYRVTNLVIQGLGRFLGQGETSWPYNTCKHG-PC 141
            I +++NG ++AS+D +  +   WF F  +  LV++G G F GQG+T+WPYN CKH   C
Sbjct: 111 PITVEVNGTIIASTDISEYSEDGWFSFELIDGLVLKG-GIFDGQGQTAWPYNDCKHNKDC 170

Query: 142 TRLPISVSRIQIKDVKYENIRGTSAKQLAVTLNCSQVVPCQGIALN--------NINLVF 201
             LP+S+   ++ +   + +   ++K    ++  S+     G+ LN        N + + 
Sbjct: 171 QHLPVSLKFNKVNNTVVDGVTSLNSKGFHFSITFSE--NFTGVNLNISAPDESPNTDGIH 230

Query: 202 NGSGSSTSALSG--AWREACRHNRHGIVLVLAGSLLILPLVLEGLCKGSIGLLINGELLA 261
             S    +  S   A  + C     G   V    +   P    G+  GS+G   N + + 
Sbjct: 231 LSSSDRINISSSVIATGDDCLGIIQGATNVSVNEITCGP--GHGISIGSLGKYPNEKDVI 290

Query: 262 SVSKNFATVGNF-------FVDGSRSLNGGD---SSAWHSYTSNRPII------------ 321
            V    AT+ N           G R L   D        +Y  N  II            
Sbjct: 291 GVHVRNATLTNTTNGVRIKAFPGDRQLLASDIIFEDIVLNYVKNPIIIDQHYGSRKVTKP 350

Query: 322 -----RDMRYEGITGSLTSQVAVCFECSQVLPCEGIVLQDINLSF----KGDGEPTSICH 339
                 D+ ++ I G+  S+VAV  +CS   PCE + L DI+LSF     G    TS+C 
Sbjct: 351 SSVKLSDVHFKNIRGTTVSEVAVLLQCSSSNPCEQVELSDIDLSFAGAASGSKNVTSLCE 405

[Close]
BLAST of Cp4.1LG14g07580 vs. TrEMBL
Match: A0A061F588_THECC (Pectin lyase-like superfamily protein, putative OS=Theobroma cacao GN=TCM_030754 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 3.6e-26
Identity = 109/389 (28.02%), Postives = 168/389 (43.19%), Query Frame = 1 

Query: 18  AQSKVFDITQYGATPDESIDSTKGLSMAWRDACANKGGGVVLVPSIGRFLVLPVLLQGPC 77
           A + +F++ QYGA+ D   D++K  + AW+ AC + G  VVL+P +G +LVLP + QGPC
Sbjct: 29  AAANLFNVLQYGASGDGKTDNSKAFTNAWKQACQSGGNSVVLIP-LGTYLVLPTVFQGPC 88

Query: 78  NGLIQLQINGDLLASSDKAFATGYSWFKFYRVTNLVIQGLGRFLGQGETSWPYNTCKHGP 137
            G I  Q+ G L A +D A      W  F  +  L I G G   GQG ++WPYNTC   P
Sbjct: 89  KGAIAFQVKGLLRAPTDAASLHLDHWISFRYIDRLTITGGGSLDGQGASAWPYNTCLTDP 148

Query: 138 -CTRLPISVSRIQIKDVKYENIRGTSAKQLAVTLNCSQVVPCQGIALNNINLVFNGSGSS 197
            C   P+++    + +    +I   ++K     +  S       I ++ +N+   G   +
Sbjct: 149 NCPPFPVTLRFDFVTNSWINHITSINSKNFHFNIFAS-----TNIRIHQVNISAPGDSPN 208

Query: 198 TSAL-------------SGAWREACRHNRHGIVLVLAGSLLILPLVLEGLCKGSIGLLIN 257
           T  +               A  + C     G   +   ++   P    G   GS+G   N
Sbjct: 209 TDGIHIGDSTGIHISDSEIATGDDCVSMGPGSQNINITNVHCGP--GHGFSVGSLGKSPN 268

Query: 258 GELLASVSKNFATVGNFFVDGSRSLNGGDSSAWH-SYTS---------------NRPIIR 317
            + +A V     TV N  + G  +LNG     W  S++S               N PI  
Sbjct: 269 EKDVAGV-----TVRNCTLTG--TLNGLRIKTWSPSHSSRCSDVTFEHVNVENVNNPIFI 328

Query: 318 DMRY----------------EGIT-----GSLTSQVAVCFECSQVLPCEGIVLQDINLSF 356
           D  Y                +G+      GS +S++AV  +CS+  PCE I L++IN+ +
Sbjct: 329 DQNYCPSHKCGRQWESRVKIQGVRFRNIWGSSSSRIAVNLQCSRSTPCENIELRNINIDY 388

[Close]
BLAST of Cp4.1LG14g07580 vs. TrEMBL
Match: A0A059BMG2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F00634 PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 4.7e-26
Identity = 103/382 (26.96%), Postives = 172/382 (45.03%), Query Frame = 1 

Query: 1   TGSVVFITILLCLYQSYAQSK-VFDITQYGATPDESIDSTKGLSMAWRDACANKGGGVVL 60
           T S++ + ++  L ++ AQ++ VF+I  +GA  D + D +K LS AW  AC ++G  VVL
Sbjct: 9   TASLLMLMLMSSLAKNQAQARNVFNIKDFGAVDDGNTDGSKALSDAWSKACNSRGTAVVL 68

Query: 61  VPSIGRFLVLPVLLQGPCNGLIQLQINGDLLASSDKAFATGYSWFKFYRVTNLVIQGLGR 120
           +PS G +L+ PV L GPCNG I+ QI GDL A +       + W  F  + +L I G G 
Sbjct: 69  IPS-GTYLLGPVRLAGPCNGAIEFQIKGDLKAFNSPQLGIDH-WITFRYMEDLTITGGGV 128

Query: 121 FLGQGETSWPYNTCKHGP-CTRLPISVSRIQIKDVKYENIRGTSAKQLAVTLNCSQVVPC 180
             GQG  +WP N CK  P C  LP+++    + + +  ++   ++K          +  C
Sbjct: 129 LDGQGAAAWPSNDCKKNPNCQALPVTMRLDFVSNARIHDVTSLNSKNFHF-----NIFSC 188

Query: 181 QGIALNNINLVFNGSGSSTSALSGAW------REACRHNRHGIVLVLAGSLLILPLVL-- 240
           + I    + +       +T  +  A+      R++        + +  GS  I    +  
Sbjct: 189 KNITFERVTIKAPDESPNTDGIHMAFSSNVFIRDSDIGTGDDCISLGPGSKNINMTDITC 248

Query: 241 ---EGLCKGSIGLLINGELLASV---SKNFATVGN---------FFVDGSRSLNGGDSSA 300
               G+  GS+G   N   +A V   S  F    N          F    + +   D + 
Sbjct: 249 GPGHGISIGSLGGTPNEPAVAKVFLGSSTFTGTTNALRIKTRAPSFQGAVKDITFQDINV 308

Query: 301 WH-----------------SYTSNRPIIRDMRYEGITGSLTSQVAVCFECSQVLPCEGIV 341
            +                 S  S++  I ++++  I G+ +S VA+   CS  +PC GI 
Sbjct: 309 KNADNPIIIEQQYCPSKTCSSQSSQVKISNVKFSNIRGTSSSSVAININCSPAVPCTGIE 368

[Close]
BLAST of Cp4.1LG14g07580 vs. TrEMBL
Match: A0A087HKH8_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA1G020100 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 4.0e-25
Identity = 77/209 (36.84%), Postives = 111/209 (53.11%), Query Frame = 1 

Query: 22  VFDITQYGATPDESIDSTKGLSMAWRDACANKGGGVVLVPSIGRFLVLPVLLQGPCNGLI 81
           VFDIT++GA  D S +S K     W   CA+     +LVP  G FL  PV+  GPC   I
Sbjct: 49  VFDITKFGAVGDGSTNSFKAFLNTWIKVCASPVPATLLVPK-GEFLTGPVIFAGPCESKI 108

Query: 82  QLQINGDLLASSDKAFATGYSWFKFYRVTNLVIQGLGRFLGQGETSWPYNTCKHGPCTRL 141
            ++++G + A++   +AT   W  F  V N+V+ G G F G+GE  W  + C       L
Sbjct: 109 TVEVHGTVSATTS-GYATP-EWILFEHVDNVVLTGTGTFHGKGEKVWAADGCGKKLQCNL 168

Query: 142 PISVSRIQIKDVKYENIRGTSAKQLAVTLNCSQVVPCQGIALNNINLVFNG--SGSSTSA 201
           P + SR+ I DV ++N+RGTS  +  V + CS+ +PC+G+ + ++NL F G   G S  +
Sbjct: 169 PPTDSRVAISDVLFKNVRGTSITKDVVQIMCSKSLPCKGVNVVDVNLNFVGKNGGGSDGS 228

Query: 202 LSGAWREACRHNRHGIVLVLAGSLLILPL 229
           L GA    C H       V+ G  L  PL
Sbjct: 229 LVGA---LCDHAN-----VIFGGKLSFPL 246

[Close]
BLAST of Cp4.1LG14g07580 vs. TAIR10
Match: AT2G15450.1 (AT2G15450.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 111.3 bits (277), Expect = 1.8e-24
Identity = 100/389 (25.71%), Postives = 161/389 (41.39%), Query Frame = 1 

Query: 3   SVVFITILLCLY------QSYAQSKVFDITQYGATPDESIDSTKGLSMAWRDACANKGGG 62
           S  F  +  CL+      +S  + KVF++ ++GA PD   D+    +  W  AC    G 
Sbjct: 5   SFAFNALCFCLFFIVVASRSTVRPKVFNVQRHGAKPDGKTDNANAFTSIWSRACKRISGS 64

Query: 63  VVLVPSIGRFLVLPVLLQGPCNGLIQLQINGDLLASSDKAFATGYSWFKFYRVTNLVIQG 122
             +    G F +  V   GPC   I+  I+G LLA ++ +     +W  F  + NL I G
Sbjct: 65  SKIYVPKGTFYLGGVEFVGPCKNPIEFIIDGTLLAPANPSDIKQDTWINFRYINNLSISG 124

Query: 123 LGRFLGQGETSWPYNTCKHGP-CTRLPIS-----VSRIQIKD---------------VKY 182
            G   GQG+ SWP+N C   P C +L ++     V+   IKD               V +
Sbjct: 125 SGTLDGQGKQSWPHNDCHTNPNCPKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHH 184

Query: 183 ENIRGTSAKQLAVTLNCSQVV--PCQGIALNNINLVFNGSGSSTSALSGAWREACRHN-- 242
            NI G +      + N   +    C  I +++ N+   G+G    A+          N  
Sbjct: 185 FNITGVTITAPGDSPNTDGIKMGSCSNIQISDTNI---GTGDDCIAILSGTTNLNISNVN 244

Query: 243 ---RHGIVLVLAGS---------LLILPLVLEGLCKGSIGLLINGELLAS--VSKNFATV 302
               HGI +   G          L++  ++  G   G    + N E  AS  +  NF   
Sbjct: 245 CGPGHGISVGSLGKNKDEKDVKDLIVRDVIFNGTSDGI--RIKNWESSASKILVSNFVYE 304

Query: 303 GNFFVDGSRSLNGGDSSAWHSYTSNRPI------IRDMRYEGITGSLTSQVAVCFECSQV 339
               +D  + +N       H    +         I++++ + I G+  ++VAV  +CS++
Sbjct: 305 NIQMIDVGKPINIDQKYCPHPPCEHERKGESHVQIQNLKLKNIYGTSKNKVAVNLQCSKI 364

[Close]
BLAST of Cp4.1LG14g07580 vs. TAIR10
Match: AT2G26620.1 (AT2G26620.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 109.0 bits (271), Expect = 8.7e-24
Identity = 98/386 (25.39%), Postives = 154/386 (39.90%), Query Frame = 1 

Query: 4   VVFITILLCLY--------QSYAQSKVFDITQYGATPDESIDSTKGLSMAWRDACANKGG 63
           + F+   LCL         +S  + KVF++ ++G+ PD   D+T   +  W  AC    G
Sbjct: 4   IAFVLKALCLSLLLIVVASRSTIRPKVFNVQRHGSKPDGKTDNTNAFTSIWSRACKRISG 63

Query: 64  GVVLVPSIGRFLVLPVLLQGPCNGLIQLQINGDLLASSDKAFATGYSWFKFYRVTNLVIQ 123
              +    G F +  V   GPC   I+  I+G LLA ++       +W  F  + NL I 
Sbjct: 64  SSKIYVPKGTFYLGGVEFVGPCKNPIEFIIDGTLLAPANPNDIKQDTWINFRYINNLSIS 123

Query: 124 GLGRFLGQGETSWPYNTCKHGP-CTRLPIS-----VSRIQIKD---------------VK 183
           G G   GQG+ SWP N C   P C +L IS     V+   IKD               V 
Sbjct: 124 GSGTLDGQGKQSWPLNDCHKNPNCPKLAISMGFAFVNNSNIKDITSLNSKMGHFNFFFVH 183

Query: 184 YENIRGTSAKQLAVTLNCSQVV--PCQGIALNNINLVFNGSGSSTSALSGAWREACRHN- 243
           + NI G +    + + N   +    C  I ++N N+   G+G    A+     +    N 
Sbjct: 184 HFNITGVTITAPSDSPNTDGIKMGSCSNIQISNTNI---GTGDDCIAILSGTTKLNISNI 243

Query: 244 ----RHGIVLVLAGS---------LLILPLVLEGLCKGSIGLLINGELLASVSKNFATVG 303
                HGI +   G          L +  ++  G   G             +  NF    
Sbjct: 244 NCGPGHGISVGSLGKNKDEKDVKDLFVRDVIFNGTSDGIRIKTWESSASKILVSNFVYEN 303

Query: 304 NFFVDGSRSLNGGDSSAWHS----YTSNRPIIRDMRYEGITGSLTSQVAVCFECSQVLPC 339
              +D  + +N       H        +   I+D++ + I G+  ++VAV  +CS+  PC
Sbjct: 304 IQMIDVGKPINIDQKYCPHPPCEHERKSHVQIQDLKLKNIYGTSKNKVAVNLQCSKSFPC 363

[Close]
BLAST of Cp4.1LG14g07580 vs. TAIR10
Match: AT1G02790.1 (AT1G02790.1 polygalacturonase 4)

HSP 1 Score: 104.0 bits (258), Expect = 2.8e-22
Identity = 94/342 (27.49%), Postives = 147/342 (42.98%), Query Frame = 1 

Query: 22  VFDITQYGATPDESIDSTKGLSMAWRDACANKGGGVVLVPSIGRFLVLPVLLQGPCNGLI 81
           V+DIT++GA  D S ++ K     W   C +     +LVP  G FL  PV+  GPC   +
Sbjct: 51  VYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLLVPK-GTFLAGPVIFAGPCKSKV 110

Query: 82  QLQINGDLLASSDKAFATGYSWFKFYRVTNLVIQGLGRFLGQGETSWPYNTC-KHGPCTR 141
            + + G ++A++   +AT   WF F RV NLV+ G G F G+GE  W  + C K   C  
Sbjct: 111 TVNVIGTIIATTS-GYATP-EWFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNL 170

Query: 142 LPISVSRIQIKDVKYENIRGTSAKQLAVTLNCSQVVPCQGIALN------NINLVFNGSG 201
            P S+    +K+V+   I   +AK   + L  ++ V  Q I L       N + +   + 
Sbjct: 171 PPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNA 230

Query: 202 SSTSALSG--AWREACRHNRHGIVLVLAGSLLILPLVLEGLCKGSIGLLINGELLASVSK 261
            + S L    A  + C     G   V    ++  P    GL  GS+G   N E ++ +  
Sbjct: 231 DNVSILDSTIATGDDCVSVGRGSNNVTVERVICGP--GHGLSVGSLGKYKNEEDVSGIHV 290

Query: 262 NFATVGNFFVDGSRSLNGGDSSAWHS----------YTSNRPIIRDMRY----------- 321
           N  T+     +G R    G S    +           +   PII D  Y           
Sbjct: 291 NNCTMIE-TDNGLRIKTWGGSDPSKAVDIKFENIIMQSVKNPIIIDQNYGSRGGDSQVAI 350

Query: 322 -----EGITGSLTSQVAVCFECSQVLPCEGIVLQDINLSFKG 329
                + I G+  ++  V   CS+ +PC+G+ + D+NL + G
Sbjct: 351 SDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 386

[Close]
BLAST of Cp4.1LG14g07580 vs. TAIR10
Match: AT4G13760.1 (AT4G13760.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 98.6 bits (244), Expect = 1.2e-20
Identity = 97/389 (24.94%), Postives = 154/389 (39.59%), Query Frame = 1 

Query: 3   SVVFITILLCLYQSYA--------QSKVFDITQYGATPDESIDSTKGLSMAWRDACANKG 62
           SVVF   +LC+   +         + K+F++ ++G+  D   D+T   +  W  AC  K 
Sbjct: 3   SVVFAFKVLCVSFLFIVVASRPTIRPKMFNVQRHGSKSDGKTDNTNVFTSVWNRACRRKS 62

Query: 63  GGVVLVPSIGRFLVLPVLLQGPCNGLIQLQINGDLLASSDKAFATGYSWFKFYRVTNLVI 122
           G   +    G F +  V   GPC   I+  I+G LLA ++       +W KF  + +L I
Sbjct: 63  GSSKIYVPKGTFYLGGVEFVGPCKNPIEFLIDGTLLAPANPNNIKQDTWIKFKYINDLSI 122

Query: 123 QGLGRFLGQGETSWPYNTCKHGP-CTRLPIS-----VSRIQIKD---------------V 182
            G G   GQG+ SWP N C   P C +L ++     V+   IKD               V
Sbjct: 123 SGSGTLDGQGKQSWPLNDCHKNPNCPKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSV 182

Query: 183 KYENIRGTSAKQLAVTLNCSQVV--PCQGIALNNINLVFNGSGSSTSALSGAWREACRHN 242
            + NI G +      + N   +    C  I ++N N+   G+G    A+          N
Sbjct: 183 HHFNITGVTITAPGNSPNTDGIKMGSCSNIHISNTNI---GTGDDCIAILSGTTNLDISN 242

Query: 243 -----RHGIVLVLAGS---------LLILPLVLEGLCKGSIGLLINGELLASVSKNFATV 302
                 HGI +   G          L I  ++  G   G             +  NF   
Sbjct: 243 VNCGPGHGISVGSLGKNKDEKDVKDLTIRDVIFNGTSDGIRIKTWESSASKILVSNFLYE 302

Query: 303 GNFFVDGSRSLNGGDSSAWHSYTSNRPI------IRDMRYEGITGSLTSQVAVCFECSQV 339
               +D  + +N       H    +         I++++ + I G+  ++VAV  +CS+ 
Sbjct: 303 NIQMIDVGKPINIDQKYCPHPPCEHEQKGESHVQIQNLKLKNIYGTSKNKVAVNLQCSKR 362

[Close]
BLAST of Cp4.1LG14g07580 vs. TAIR10
Match: AT2G40310.1 (AT2G40310.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 96.7 bits (239), Expect = 4.5e-20
Identity = 90/389 (23.14%), Postives = 157/389 (40.36%), Query Frame = 1 

Query: 3   SVVFITILLCLYQSYA--------QSKVFDITQYGATPDESIDSTKGLSMAWRDACANKG 62
           S+ F+  +LC+   +         + K F++ ++G+ PD   D+    +  W  AC  K 
Sbjct: 3   SIAFVFKVLCVSFLFIFVASRPTIRPKTFNVQRHGSKPDGKTDNANVFTSIWSRACKRKS 62

Query: 63  GGVVLVPSIGRFLVLPVLLQGPCNGLIQLQINGDLLASSDKAFATGYSWFKFYRVTNLVI 122
           G   +    G F +  V   GPC   I+  I+G LLA ++ +     +W  F  + NL I
Sbjct: 63  GSSKIYVPKGIFYLGGVEFVGPCKNPIEFVIDGTLLAPANPSDIKQDTWINFRYINNLSI 122

Query: 123 QGLGRFLGQGETSWPYNTC-KHGPCTRLPISVSRIQIKDVKYENIRGTSAKQ-------- 182
            G G   GQG+ SWP N C K+  C +L +++    + +   ++I   ++K         
Sbjct: 123 SGSGTLDGQGKQSWPLNDCHKNLNCPKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSV 182

Query: 183 -----LAVTLNCSQVVP---------CQGIALNNINLVFNGSGSSTSA-LSGAWREACRH 242
                  VT+  S   P         C  + ++N N+   G+G    A LSG       +
Sbjct: 183 HHFNITGVTITASGDSPNTDGIKMGSCSNMHISNTNI---GTGDDCIAILSGTTNLDISN 242

Query: 243 NR----HGIVLVLAG---------SLLILPLVLEGLCKGSIGLLINGELLASVSKNFATV 302
            +    HGI +   G         +L +  ++  G   G             +  NF   
Sbjct: 243 VKCGPGHGISVGSLGKNKDEKDVKNLTVRDVIFNGTSDGIRIKTWESSASKILVSNFVYE 302

Query: 303 GNFFVDGSRSLNGGDSSAWHSYTSNRPI------IRDMRYEGITGSLTSQVAVCFECSQV 339
               +D  + +N       H    +         I+D++ + I G+  ++VA+  +CS+ 
Sbjct: 303 NIQMIDVGKPINIDQKYCPHPPCEHEQKGESHVQIQDLKLKNIYGTSKNKVAMNLQCSKS 362

[Close]
BLAST of Cp4.1LG14g07580 vs. NCBI nr
Match: gi|778688362|ref|XP_011652730.1| (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 1.4e-44
Identity = 127/367 (34.60%), Postives = 185/367 (50.41%), Query Frame = 1 

Query: 28  YGATPDESIDSTKGLSMAWRDACANKGGGVVLVPSIGRFLVLPVLLQGPCNGLIQLQING 87
           +GA PD   D++K LS AW +AC N GGG+VL+P+ GRFLVLP+LLQGPC+G I++Q++G
Sbjct: 3   FGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDG 62

Query: 88  DLLASSDKAFATGYSWFKFYRVTNLVIQGLGRFLGQGETSWPYNTCKHGPCTRLPISVSR 147
           +LLA  D+ FATG  W    +V NL I GLG   G+G T+WP  +         P+S+  
Sbjct: 63  ELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTAWPSTSHNR------PVSMRL 122

Query: 148 IQIKDVKYENIRGTSAKQLAVTLNCSQVVPCQGIALNNINLVFNGSGSSTSA--LSGAWR 207
             I + +  NI+  ++K     ++      C+ +  +++ ++   +  +T    +S +  
Sbjct: 123 NGINNARITNIKSYNSKLFHFAMH-----GCRDVTFDHVTVIAPANSPNTDGIHISSSSG 182

Query: 208 EACRHNRHG----IVLVLAGSLLILPLVLE-----GLCKGSIGLLINGELLASVSKNFAT 267
               H+  G     + +  GS  I    ++     G+  GS+G   N E +  V+   +T
Sbjct: 183 INIMHSTIGTGDDCISLGPGSKFINITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDST 242

Query: 268 VGNFFVDGSRSLNGGDSSAW-HSYTS---------------NRPI--------------- 327
               F+  S   NG     W  SY+S                 PI               
Sbjct: 243 ----FIGTS---NGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQK 302

Query: 328 --------IRDMRYEGITGSLTSQVAVCFECSQVLPCEGIVLQDINLSFKGDGEPTSICH 345
                   I+D+RYEGI GS  +QVAV FECS+V+PC+GIVLQDINL F G G  TS CH
Sbjct: 303 MVYKSMVQIKDVRYEGIRGSSNTQVAVDFECSEVVPCQGIVLQDINLPFNGGGRTTSNCH 351

[Close]
BLAST of Cp4.1LG14g07580 vs. NCBI nr
Match: gi|659096624|ref|XP_008449197.1| (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 9.6e-41
Identity = 135/359 (37.60%), Postives = 176/359 (49.03%), Query Frame = 1 

Query: 196 STSALSGAWREACRHNRHGIVLVLA-GSLLILPLVLEGLCKGSIGLLINGELLASVSKNF 255
           ++ ALS AW EAC +N  G+VL+ A G  L+LPL+L+G C G I + ++GELLA +++N 
Sbjct: 13  NSKALSTAWSEACTNNGGGVVLIPALGRFLVLPLLLQGPCHGFIHIQLDGELLAPLNENT 72

Query: 256 AT-------VGNFFVDGSRSLNGGDSSAWHSYTSNRPIIRDMRYEGITGSLTSQV----A 315
                    V N F+DG   LNG  S+AW S + NRPI   M+  GI  +  S +    +
Sbjct: 73  GDYWLSIDKVNNLFIDGLGRLNGRGSTAWPSASHNRPI--SMKLTGINNARISNIKSYNS 132

Query: 316 VCFECSQVLPCEGIVLQDINLSFKGDGEPTSICHNALSRA---WKEACGHNGHGIVLVPA 375
             F  + V  C  +    + +    +   T   H +LS          G     I L P 
Sbjct: 133 KLFHFA-VHGCRDVTFDHVTVIAPANSPNTDGIHVSLSSGINIMHSTIGTGDDCISLGPG 192

Query: 376 GSFLVLPLVLEGPCKG-SIGLLINGKLLAPVSKNFATGKYWLSISKVDNFFVNGSGSLNG 435
             F+ +  V  GP  G SIG L  GK        +   +    ++  D+ F+   G+ NG
Sbjct: 193 SKFINITNVQCGPGHGISIGSL--GK--------YPNEEDVFEVTVRDSTFL---GTTNG 252

Query: 436 GGSSAWHSDTSN----------------RPI--------------SNSKVQIKDVRYEGI 495
                W S  SN                 PI              S SKVQIKDVRYEGI
Sbjct: 253 ARIKTWSSSYSNMVSKVTFLNLQMNNVKNPIIIDQSYCPHSCGRQSQSKVQIKDVRYEGI 312

Query: 496 IGSSTSQAAVSFECSQVCSCESIVLQDINLSYKGDGEPTSICHNVKGSAFGKQLPSSCL 509
            GSS +Q AV FECSQV  C+ IVLQDINL + G G  T+ CHNV+GSAFG QLP SCL
Sbjct: 313 RGSSNTQVAVDFECSQVFPCQGIVLQDINLPFNGGGRTTANCHNVRGSAFGHQLPPSCL 355

[Close]
BLAST of Cp4.1LG14g07580 vs. NCBI nr
Match: gi|700200928|gb|KGN56061.1| (hypothetical protein Csa_3G063610 [Cucumis sativus])

HSP 1 Score: 172.6 bits (436), Expect = 1.8e-39
Identity = 131/364 (35.99%), Postives = 177/364 (48.63%), Query Frame = 1 

Query: 196 STSALSGAWREACRHNRHGIVLVLA-GSLLILPLVLEGLCKGSIGLLINGELLASVSKNF 255
           ++ ALS AW EAC +N  GIVL+ A G  L+LPL+L+G C G I + ++GELLA + ++F
Sbjct: 13  NSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHF 72

Query: 256 AT---------VGNFFVDGSRSLNGGDSSAWHSYTSNRPIIRDMRYEGITG----SLTSQ 315
           AT         V N F+DG  SL+G  S+AW S + NRP+   MR  GI      ++ S 
Sbjct: 73  ATGDYWLSIDQVNNLFIDGLGSLDGRGSTAWPSTSHNRPV--SMRLNGINNARITNIKSY 132

Query: 316 VAVCFECSQVLPCEGIVLQDINLSFKGDGEPTSICHNALS---RAWKEACGHNGHGIVLV 375
            +  F  + +  C  +    + +    +   T   H + S          G     I L 
Sbjct: 133 NSKLFHFA-MHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLG 192

Query: 376 PAGSFLVLPLVLEGPCKG-SIGLLINGKLLAPVSKNFATGKYWLSISKVDNFFVNGSGSL 435
           P   F+ +  +  GP  G SIG L  GK        +   +    ++  D+ F+   G+ 
Sbjct: 193 PGSKFINITNIQCGPGHGISIGSL--GK--------YPNEEDVFEVTVRDSTFI---GTS 252

Query: 436 NGGGSSAWHSDTSN---------------------------------RPISNSKVQIKDV 495
           NG     W S  S+                                 + +S S VQIKDV
Sbjct: 253 NGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKMMSKSMVQIKDV 312

Query: 496 RYEGIIGSSTSQAAVSFECSQVCSCESIVLQDINLSYKGDGEPTSICHNVKGSAFGKQLP 509
           RYEGI GSS +Q AV FECS+V  C+ IVLQDINL + G G  TS CHNV+GSAFG QLP
Sbjct: 313 RYEGIRGSSNTQVAVDFECSEVVPCQGIVLQDINLPFNGGGRTTSNCHNVRGSAFGHQLP 360

[Close]
BLAST of Cp4.1LG14g07580 vs. NCBI nr
Match: gi|449463753|ref|XP_004149596.1| (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 1.1e-36
Identity = 122/348 (35.06%), Postives = 164/348 (47.13%), Query Frame = 1 

Query: 42  LSMAWRDACANKGGGVVLVPSIGRFLVLPVLLQGPCNGLIQLQINGDLLASSDKAFATGY 101
           LS AW  AC N GGGVVL+P+ G+FLVLP+LLQGPC+G+I++Q++G+LLASSDK FA G 
Sbjct: 7   LSSAWSGACGNNGGGVVLIPAQGKFLVLPLLLQGPCHGVIRIQLDGELLASSDKQFAIGD 66

Query: 102 SWFKFYRVTNLVIQGLGRFLGQGETSWPYNTCKHGPCTRLPISVSRIQIKDVKYENIRGT 161
            W     V NL I GLGR  G G ++WP N+         PIS+    +     +NI   
Sbjct: 67  HWLSIENVNNLFIDGLGRLTGSGASAWPSNSLNR------PISMKFNNVNTASIKNISSF 126

Query: 162 SAKQLAVTLNCSQVVPCQGIAL----NNINLVFNGSGSSTSALSGAWREACRHNRHGIVL 221
            +K     ++ S+ V    + +    N+ N   +G   STS+               I L
Sbjct: 127 DSKFFHFAVHASRDVTFDNVTVVAPANSPNT--DGIHISTSSGINIMHSTIGTGDDCISL 186

Query: 222 VLAGSLLILPLVL----EGLCKGSIGLLINGELLASVSKNFATVGNFFVDGSRSLNGGDS 281
                ++ +  V      G+  GS+G   N E +  V+   +T    F+  S   NG   
Sbjct: 187 GPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDST----FIGTS---NGARI 246

Query: 282 SAWHS-YTS---------------NRPIIRDMRY-------EGITGSLTSQVAV------ 341
            +W S Y+S                 PII D  Y         +  S+     V      
Sbjct: 247 KSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNKMNKSMVQIKDVRYQGIT 306

Query: 342 ---------CFECSQVLPCEGIVLQDINLSFKGDGEPTSICHNALSRA 344
                     FECSQVLPC+GIVLQDINL+F G G+ TSICHN    A
Sbjct: 307 GSSNTPVAVDFECSQVLPCQGIVLQDINLTFNGGGKTTSICHNVKGSA 339

[Close]
BLAST of Cp4.1LG14g07580 vs. NCBI nr
Match: gi|702453102|ref|XP_010026119.1| (PREDICTED: exopolygalacturonase-like [Eucalyptus grandis])

HSP 1 Score: 139.4 bits (350), Expect = 1.7e-29
Identity = 109/361 (30.19%), Postives = 163/361 (45.15%), Query Frame = 1 

Query: 22  VFDITQYGATPDESIDSTKGLSMAWRDACANKGGGVVLVPSIGRFLVLPVLLQGPCNGL- 81
           VFD+TQYGA  D   D++     AW  AC N G   +++P+ G FL  PV+ QGPC G  
Sbjct: 51  VFDVTQYGAKADGKTDNSMAFVKAWNAACHNSGPAKLVIPT-GTFLSGPVVFQGPCEGSN 110

Query: 82  -IQLQINGDLLASSDKAFATGYSWFKFYRVTNLVIQGLGRFLGQGETSWPYNTCKHG-PC 141
            I +++NG ++AS+D +  +   WF F  +  LV++G G F GQG+T+WPYN CKH   C
Sbjct: 111 PITVEVNGTIIASTDISEYSEDGWFSFELIDGLVLKG-GIFDGQGQTAWPYNDCKHNKDC 170

Query: 142 TRLPISVSRIQIKDVKYENIRGTSAKQLAVTLNCSQVVPCQGIALN--------NINLVF 201
             LP+S+   ++ +   + +   ++K    ++  S+     G+ LN        N + + 
Sbjct: 171 QHLPVSLKFNKVNNTVVDGVTSLNSKGFHFSITFSE--NFTGVNLNISAPDESPNTDGIH 230

Query: 202 NGSGSSTSALSG--AWREACRHNRHGIVLVLAGSLLILPLVLEGLCKGSIGLLINGELLA 261
             S    +  S   A  + C     G   V    +   P    G+  GS+G   N + + 
Sbjct: 231 LSSSDRINISSSVIATGDDCLGIIQGATNVSVNEITCGP--GHGISIGSLGKYPNEKDVI 290

Query: 262 SVSKNFATVGNF-------FVDGSRSLNGGD---SSAWHSYTSNRPII------------ 321
            V    AT+ N           G R L   D        +Y  N  II            
Sbjct: 291 GVHVRNATLTNTTNGVRIKAFPGDRQLLASDIIFEDIVLNYVKNPIIIDQHYGSRKVTKP 350

Query: 322 -----RDMRYEGITGSLTSQVAVCFECSQVLPCEGIVLQDINLSF----KGDGEPTSICH 339
                 D+ ++ I G+  S+VAV  +CS   PCE + L DI+LSF     G    TS+C 
Sbjct: 351 SSVKLSDVHFKNIRGTTVSEVAVLLQCSSSNPCEQVELSDIDLSFAGAASGSKNVTSLCE 405

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g07580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PGLR_ACTDE4.1e-2327.35Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1[more]
PGLR1_ARATH5.0e-2127.49Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3 PE=2 SV=1[more]
PGLR3_MAIZE6.5e-2132.78Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1[more]
PGLR_PERAE1.4e-2025.74Polygalacturonase OS=Persea americana PE=2 SV=1[more]
PGLR1_MAIZE1.8e-1840.80Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1[more]
BLAST of Cp4.1LG14g07580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7H9_CUCSA1.3e-3935.99Uncharacterized protein OS=Cucumis sativus GN=Csa_3G063610 PE=3 SV=1[more]
A0A059AWR6_EUCGR1.2e-2930.19Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01088 PE=3 SV=1[more]
A0A061F588_THECC3.6e-2628.02Pectin lyase-like superfamily protein, putative OS=Theobroma cacao GN=TCM_030754... [more]
A0A059BMG2_EUCGR4.7e-2626.96Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F00634 PE=3 SV=1[more]
A0A087HKH8_ARAAL4.0e-2536.84Uncharacterized protein OS=Arabis alpina GN=AALP_AA1G020100 PE=3 SV=1[more]
BLAST of Cp4.1LG14g07580 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G15450.11.8e-2425.71 Pectin lyase-like superfamily protein[more]
AT2G26620.18.7e-2425.39 Pectin lyase-like superfamily protein[more]
AT1G02790.12.8e-2227.49 polygalacturonase 4[more]
AT4G13760.11.2e-2024.94 Pectin lyase-like superfamily protein[more]
AT2G40310.14.5e-2023.14 Pectin lyase-like superfamily protein[more]
BLAST of Cp4.1LG14g07580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778688362|ref|XP_011652730.1|1.4e-4434.60PREDICTED: exopolygalacturonase-like [Cucumis sativus][more]
gi|659096624|ref|XP_008449197.1|9.6e-4137.60PREDICTED: exopolygalacturonase-like [Cucumis melo][more]
gi|700200928|gb|KGN56061.1|1.8e-3935.99hypothetical protein Csa_3G063610 [Cucumis sativus][more]
gi|449463753|ref|XP_004149596.1|1.1e-3635.06PREDICTED: exopolygalacturonase-like [Cucumis sativus][more]
gi|702453102|ref|XP_010026119.1|1.7e-2930.19PREDICTED: exopolygalacturonase-like [Eucalyptus grandis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence
IPR000743Glyco_hydro_28
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004650 polygalacturonase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g07580.1Cp4.1LG14g07580.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 145..198
score: 1.7E-8coord: 348..430
score: 2.4E-8coord: 286..340
score: 3.3E-5coord: 50..144
score: 2.
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 6..150
score: 1.61E-21coord: 281..340
score: 8.17E-11coord: 338..508
score: 2.77E-24coord: 131..194
score: 5.65
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 195..281
score: 1.3E-4coord: 333..430
score: 2.5E-15coord: 282..332
score: 4.6E-11coord: 5..134
score: 1.8E-22coord: 142..194
score: 2.6E-12coord: 432..507
score: 8.0
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 5..159
score: 1.7
NoneNo IPR availablePANTHERPTHR31375:SF10GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATEDcoord: 5..159
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG14g07580Cucurbita pepo (Zucchini)cpecpeB240
Cp4.1LG14g07580Cucumber (Gy14) v1cgycpeB0026
Cp4.1LG14g07580Cucurbita maxima (Rimu)cmacpeB345
Cp4.1LG14g07580Cucurbita maxima (Rimu)cmacpeB469
Cp4.1LG14g07580Cucurbita maxima (Rimu)cmacpeB818
Cp4.1LG14g07580Cucurbita moschata (Rifu)cmocpeB308
Cp4.1LG14g07580Cucurbita moschata (Rifu)cmocpeB772
Cp4.1LG14g07580Wild cucumber (PI 183967)cpecpiB216
Cp4.1LG14g07580Cucumber (Chinese Long) v2cpecuB213
Cp4.1LG14g07580Bottle gourd (USVL1VR-Ls)cpelsiB179
Cp4.1LG14g07580Watermelon (Charleston Gray)cpewcgB194
Cp4.1LG14g07580Melon (DHL92) v3.5.1cpemeB185
Cp4.1LG14g07580Cucumber (Gy14) v2cgybcpeB326
Cp4.1LG14g07580Melon (DHL92) v3.6.1cpemedB232
Cp4.1LG14g07580Silver-seed gourdcarcpeB0683
Cp4.1LG14g07580Silver-seed gourdcarcpeB0833
Cp4.1LG14g07580Cucumber (Chinese Long) v3cpecucB0256
Cp4.1LG14g07580Wax gourdcpewgoB0276