Cp4.1LG14g07400 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG14g07400
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCp4.1LG14 : 5581600 .. 5583111 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATTACTTCTCTTTCTCGAAACCTCCGTGATTTCTCCCACCCTTACTTCTACTCTATTTACTCATTTGCTCCTCCTTCTCCATTTCCCTCATCCTCGCCTTCCAAGCATTTTGGCCGTTTTATTCGATTTTATACCGCACCGACATCCCATTCTGCTGCTCGTTCTCCCTTACTCTGCAATTCGACTTCCCAATCTGTGCCTTCATTGTGTTTGTTAGAGAGATGCAATGGCGTAGCCAAGGATTTGAATCTTGGATTGTTTCGTCCCCACTACAGAAGCTGCCGCCGTTCTTTTTCCTCCGATTCGTTTGAGAAGCCCCAGTTTGGAACTGGTGAATTGAATGTGTTTAAACCGAATGTGACGTCCAATCAATTTTGGGATATTATAAATATCATTCGGGAAAATCAGGAGGATTTGGAGTCCAAGTTGGATTCGTTGAATGTAAGTTTCACCAACGCTTTAGTTGCTCAGATTTTTCGGGTGCTGAATAATCATAAGGTTTCTGCCTTTCGTTTTTTCAACTGGGTTAGAGTTCAGTCCTGTAAATTTCCTTGTAACTCTGATATTTATAGTCTACTTATTGATAATTTTGGTAGATTAGATGATTATGAGGGGATTCTTCCTGTTCTGAACGAATTCAGGCAGAAAGGAGTTGGTCTAAACCACAAAGCATTTGAGTTTTTACATGTTCATCTATCAGATGAAGATTCAATTAAGATTTCTGTTGAAAGACTGGTCAAGTTGTTGAATGAAGTAGGAGGATCCTGTCGAATTTCCGGGGTCATGGCATTGATTGAGATGTTCTGTTCTCTTGGTTCTTTTGGAATGGCAAAGTTTGTAACTGAGATAACCGAGAAAAGAACATCTTTCTATAATATCATCGTTCGGGAACAATGTCGCCGAAACGATTTCGAAGGAGCTAGATGTACACTTGATGAGATGAGGCAAGCAGGGTGTAGCCCAGATGTGGGCATTCTCAATTATCTGCTCAGTAGTTTGTGCAAGAATGACAAATTTTCTGAAGCTCAGAACCTGTTTGAAGAAATGCTTGAACGAGATTGCCCTCCAAACTCATTGACATTTGAAGTAATTATCTGTCATCTCTGTGAAATTGGTAATATAGAATCAGCACTCAACTTTCTTGACATGATGGTGTCAAGGGGTCTCGAGCCTCGCCTTTCGACGCACGCTGCCTTCGTGAAAAGCTACTTCAATTCACAGAGATACGAGGAGGCGTATTGGTATACAATCGATTCGAGCTTGAAACATGGGATGGCACAAAATGCAACATATAGCTTGCTTGCAACACTTCATGAGAAGAGAGGAAACTTAGTTGATGCTCAAAAGGTTCTTTGTGAGTTGATAGATGCAGGTCTAAGACCGAACTTTCCAGTGTATATGAGAGTTTTGAAGAAGCTTCAGGTTCAAGGCAGGGAAGATTTGGCGAATGATTTGAAGGGAAAATTCTCTAACGTAAGTATGCAAAGGGACATTCAAACTGGATAA

mRNA sequence

ATGGGGATTACTTCTCTTTCTCGAAACCTCCGTGATTTCTCCCACCCTTACTTCTACTCTATTTACTCATTTGCTCCTCCTTCTCCATTTCCCTCATCCTCGCCTTCCAAGCATTTTGGCCGTTTTATTCGATTTTATACCGCACCGACATCCCATTCTGCTGCTCGTTCTCCCTTACTCTGCAATTCGACTTCCCAATCTGTGCCTTCATTGTGTTTGTTAGAGAGATGCAATGGCGTAGCCAAGGATTTGAATCTTGGATTGTTTCGTCCCCACTACAGAAGCTGCCGCCGTTCTTTTTCCTCCGATTCGTTTGAGAAGCCCCAGTTTGGAACTGGTGAATTGAATGTGTTTAAACCGAATGTGACGTCCAATCAATTTTGGGATATTATAAATATCATTCGGGAAAATCAGGAGGATTTGGAGTCCAAGTTGGATTCGTTGAATGTAAGTTTCACCAACGCTTTAGTTGCTCAGATTTTTCGGGTGCTGAATAATCATAAGGTTTCTGCCTTTCGTTTTTTCAACTGGGTTAGAGTTCAGTCCTGTAAATTTCCTTGTAACTCTGATATTTATAGTCTACTTATTGATAATTTTGGTAGATTAGATGATTATGAGGGGATTCTTCCTGTTCTGAACGAATTCAGGCAGAAAGGAGTTGGTCTAAACCACAAAGCATTTGAGTTTTTACATGTTCATCTATCAGATGAAGATTCAATTAAGATTTCTGTTGAAAGACTGGTCAAGTTGTTGAATGAAGTAGGAGGATCCTGTCGAATTTCCGGGGTCATGGCATTGATTGAGATGTTCTGTTCTCTTGGTTCTTTTGGAATGGCAAAGTTTGTAACTGAGATAACCGAGAAAAGAACATCTTTCTATAATATCATCGTTCGGGAACAATGTCGCCGAAACGATTTCGAAGGAGCTAGATGTACACTTGATGAGATGAGGCAAGCAGGGTGTAGCCCAGATGTGGGCATTCTCAATTATCTGCTCAGTAGTTTGTGCAAGAATGACAAATTTTCTGAAGCTCAGAACCTGTTTGAAGAAATGCTTGAACGAGATTGCCCTCCAAACTCATTGACATTTGAAGTAATTATCTGTCATCTCTGTGAAATTGGTAATATAGAATCAGCACTCAACTTTCTTGACATGATGGTGTCAAGGGGTCTCGAGCCTCGCCTTTCGACGCACGCTGCCTTCGTGAAAAGCTACTTCAATTCACAGAGATACGAGGAGGCGTATTGGTATACAATCGATTCGAGCTTGAAACATGGGATGGCACAAAATGCAACATATAGCTTGCTTGCAACACTTCATGAGAAGAGAGGAAACTTAGTTGATGCTCAAAAGGTTCTTTGTGAGTTGATAGATGCAGGTCTAAGACCGAACTTTCCAGTGTATATGAGAGTTTTGAAGAAGCTTCAGGTTCAAGGCAGGGAAGATTTGGCGAATGATTTGAAGGGAAAATTCTCTAACGTAAGTATGCAAAGGGACATTCAAACTGGATAA

Coding sequence (CDS)

ATGGGGATTACTTCTCTTTCTCGAAACCTCCGTGATTTCTCCCACCCTTACTTCTACTCTATTTACTCATTTGCTCCTCCTTCTCCATTTCCCTCATCCTCGCCTTCCAAGCATTTTGGCCGTTTTATTCGATTTTATACCGCACCGACATCCCATTCTGCTGCTCGTTCTCCCTTACTCTGCAATTCGACTTCCCAATCTGTGCCTTCATTGTGTTTGTTAGAGAGATGCAATGGCGTAGCCAAGGATTTGAATCTTGGATTGTTTCGTCCCCACTACAGAAGCTGCCGCCGTTCTTTTTCCTCCGATTCGTTTGAGAAGCCCCAGTTTGGAACTGGTGAATTGAATGTGTTTAAACCGAATGTGACGTCCAATCAATTTTGGGATATTATAAATATCATTCGGGAAAATCAGGAGGATTTGGAGTCCAAGTTGGATTCGTTGAATGTAAGTTTCACCAACGCTTTAGTTGCTCAGATTTTTCGGGTGCTGAATAATCATAAGGTTTCTGCCTTTCGTTTTTTCAACTGGGTTAGAGTTCAGTCCTGTAAATTTCCTTGTAACTCTGATATTTATAGTCTACTTATTGATAATTTTGGTAGATTAGATGATTATGAGGGGATTCTTCCTGTTCTGAACGAATTCAGGCAGAAAGGAGTTGGTCTAAACCACAAAGCATTTGAGTTTTTACATGTTCATCTATCAGATGAAGATTCAATTAAGATTTCTGTTGAAAGACTGGTCAAGTTGTTGAATGAAGTAGGAGGATCCTGTCGAATTTCCGGGGTCATGGCATTGATTGAGATGTTCTGTTCTCTTGGTTCTTTTGGAATGGCAAAGTTTGTAACTGAGATAACCGAGAAAAGAACATCTTTCTATAATATCATCGTTCGGGAACAATGTCGCCGAAACGATTTCGAAGGAGCTAGATGTACACTTGATGAGATGAGGCAAGCAGGGTGTAGCCCAGATGTGGGCATTCTCAATTATCTGCTCAGTAGTTTGTGCAAGAATGACAAATTTTCTGAAGCTCAGAACCTGTTTGAAGAAATGCTTGAACGAGATTGCCCTCCAAACTCATTGACATTTGAAGTAATTATCTGTCATCTCTGTGAAATTGGTAATATAGAATCAGCACTCAACTTTCTTGACATGATGGTGTCAAGGGGTCTCGAGCCTCGCCTTTCGACGCACGCTGCCTTCGTGAAAAGCTACTTCAATTCACAGAGATACGAGGAGGCGTATTGGTATACAATCGATTCGAGCTTGAAACATGGGATGGCACAAAATGCAACATATAGCTTGCTTGCAACACTTCATGAGAAGAGAGGAAACTTAGTTGATGCTCAAAAGGTTCTTTGTGAGTTGATAGATGCAGGTCTAAGACCGAACTTTCCAGTGTATATGAGAGTTTTGAAGAAGCTTCAGGTTCAAGGCAGGGAAGATTTGGCGAATGATTTGAAGGGAAAATTCTCTAACGTAAGTATGCAAAGGGACATTCAAACTGGATAA

Protein sequence

MGITSLSRNLRDFSHPYFYSIYSFAPPSPFPSSSPSKHFGRFIRFYTAPTSHSAARSPLLCNSTSQSVPSLCLLERCNGVAKDLNLGLFRPHYRSCRRSFSSDSFEKPQFGTGELNVFKPNVTSNQFWDIINIIRENQEDLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVRVQSCKFPCNSDIYSLLIDNFGRLDDYEGILPVLNEFRQKGVGLNHKAFEFLHVHLSDEDSIKISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVTEITEKRTSFYNIIVREQCRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEAQNLFEEMLERDCPPNSLTFEVIICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYWYTIDSSLKHGMAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVLKKLQVQGREDLANDLKGKFSNVSMQRDIQTG
BLAST of Cp4.1LG14g07400 vs. Swiss-Prot
Match: PPR27_ARATH (Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 3.1e-23
Identity = 102/390 (26.15%), Postives = 171/390 (43.85%), Query Frame = 1

Query: 116 NVFKPNVTSNQFWDI--INIIRENQEDLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFR 175
           NVF  NV  N       +N  R+  ED++    S NV   N L+    ++  N K+    
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 281

Query: 176 FFNWVRVQSCKFPCNSDIYSLLIDNFGRLDDYEGILPVLNEFRQKGVGLNHKAFEFLHVH 235
                 V++   P N   +++LID F + D+  G + V  E   + V  N  ++  L   
Sbjct: 282 AVLKEMVENDVSP-NLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING 341

Query: 236 LSDEDSIKISVERLVKLLNEVGGSCRISGVMALIEMFC-------SLGSFGMAKFVTEIT 295
           L +   I  ++    K+++  G    +    ALI  FC       +L  FG  K    + 
Sbjct: 342 LCNGGKISEAISMRDKMVS-AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP 401

Query: 296 EKRTSFYNIIVREQCRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEAQN 355
             R   YN+++   C+    +      +EM + G  PDVG  N L++ LC+N     A+ 
Sbjct: 402 TTR--MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 461

Query: 356 LFEEMLERDCPPNSLTFEVIICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYF 415
           LF+++  +   P+ +TF +++   C  G    A   L  M   GL+PR  T+   +K Y 
Sbjct: 462 LFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 521

Query: 416 NSQRYEEAYWYTIDSSLKHGMAQN-ATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNF 475
                + A         +  +  N A+Y++L   + ++G L DA  +L E+++ GL PN 
Sbjct: 522 KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 581

Query: 476 PVYMRVLKKLQVQGREDLANDLKGKFSNVS 496
             Y  V +++  QG      D++G   NVS
Sbjct: 582 ITYEIVKEEMVDQG---FVPDIEGHLFNVS 603

BLAST of Cp4.1LG14g07400 vs. Swiss-Prot
Match: PPR78_ARATH (Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.9e-20
Identity = 91/371 (24.53%), Postives = 156/371 (42.05%), Query Frame = 1

Query: 125 NQFWDIINIIRENQEDLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVRVQSCK 184
           N+   +++  R  ++DLE  L + +   ++ LV Q+ +   N    A RFF W R +   
Sbjct: 39  NEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWAR-RIPD 98

Query: 185 FPCNSDIYSLLIDNFGRLDDYEGILPVLNEFRQKGV-GLNHKAFEFLHVHLSDEDSIKIS 244
           F  + + Y +L++  G    +  +   L E R+     ++ K F ++        ++   
Sbjct: 99  FAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVF-WIVFRAYSRANLPSE 158

Query: 245 VERLVKLLNEVGGSCRISGVMALIEMFCSLGS-------FGMAKFVTEITEKRTSFYNII 304
             R    + E G    +  +  L+   C           FG AK    +   +T  Y+I+
Sbjct: 159 ACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKT--YSIL 218

Query: 305 VREQCRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEAQNLFEEMLERDC 364
           VR   R  D  GAR   DEM +  C  D+   N LL +LCK+        +F+EM     
Sbjct: 219 VRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGL 278

Query: 365 PPNSLTFEVIICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYW 424
            P++ +F + I   C+ G++ SA   LD M    L P + T    +K+   +++ ++AY 
Sbjct: 279 KPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYL 338

Query: 425 YTIDSSLKHGMAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVLKKLQ 484
              +   K       TY+ +   H     +  A K+L  +      P+   Y  VLK L 
Sbjct: 339 LLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLI 398

Query: 485 VQGREDLANDL 488
             GR D A ++
Sbjct: 399 RIGRFDRATEI 405

BLAST of Cp4.1LG14g07400 vs. Swiss-Prot
Match: PP440_ARATH (Pentatricopeptide repeat-containing protein At5g61400 OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.1e-19
Identity = 59/233 (25.32%), Postives = 108/233 (46.35%), Query Frame = 1

Query: 254 VGGSCRISGVMALIEMFCSLGSFGMAKFVTEITEKRTSFYNIIVREQCRRNDFEGARCTL 313
           V G C+   ++    +F  +  FG+        +     YN ++   C+  +   A   L
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGV--------DPNLYVYNCLIHGHCKSGNMLEAVGLL 370

Query: 314 DEMRQAGCSPDVGILNYLLSSLCKNDKFSEAQNLFEEMLERDCPPNSLTFEVIICHLCEI 373
            EM     SPDV     L++ LC  D+ +EA  LF++M      P+S T+  +I   C+ 
Sbjct: 371 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 430

Query: 374 GNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYWYTIDSSLKHGMAQNATY 433
            N+E AL+    M + G+EP + T +  +  Y N +  + A     + ++K  +    TY
Sbjct: 431 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 490

Query: 434 SLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVLKKLQVQGREDLAND 487
           + L   H K  N+ +A ++  ++++AG+ PN   +  ++     +GR  +A D
Sbjct: 491 TALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAID 535

BLAST of Cp4.1LG14g07400 vs. Swiss-Prot
Match: PPR39_ARATH (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.7e-19
Identity = 56/208 (26.92%), Postives = 101/208 (48.56%), Query Frame = 1

Query: 293 YNIIVREQCRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEAQNLFEEML 352
           YN ++   C    ++     L +M +   SP+V   + L+ S  K  K  EA  L +EM+
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360

Query: 353 ERDCPPNSLTFEVIICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYE 412
           +R   PN++T+  +I   C+   +E A+  +D+M+S+G +P + T    +  Y  + R +
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420

Query: 413 EAYWYTIDSSLKHGMAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVL 472
           +      + SL+  +A   TY+ L     + G L  A+K+  E++   +RP+   Y  +L
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480

Query: 473 KKLQVQGREDLANDLKGKFSNVSMQRDI 501
             L   G  + A ++ GK     M+ DI
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDI 508

BLAST of Cp4.1LG14g07400 vs. Swiss-Prot
Match: PP120_ARATH (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.0e-18
Identity = 69/285 (24.21%), Postives = 124/285 (43.51%), Query Frame = 1

Query: 192 YSLLIDNFGRLDDYEGILPVLNEFRQKGVGLNHKAFEFLHVHLSDEDSIKISVERLVKLL 251
           Y  LID      +    L + NE   KG+  N   +  L   LS++  I +   +L   +
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI-LEAAQLANEM 418

Query: 252 NEVGGSCRISGVMALIEMFCSLGSFGMAKFVTEITEKRTSF-----YNIIVREQCRRNDF 311
           +E G    +     L+   C +G    A  + ++   +  F     +NI++     +   
Sbjct: 419 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 478

Query: 312 EGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEAQNLFEEMLERDCPPNSLTFEVI 371
           E A   LD M   G  PDV   N LL+ LCK  KF +    ++ M+E+ C PN  TF ++
Sbjct: 479 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 538

Query: 372 ICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYWYTIDSSLKHG 431
           +  LC    ++ AL  L+ M ++ + P   T    +  +  +   + A  YT+   ++  
Sbjct: 539 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA--YTLFRKMEEA 598

Query: 432 ---MAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVY 469
               +   TY+++     ++ N+  A+K+  E++D  L P+   Y
Sbjct: 599 YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640

BLAST of Cp4.1LG14g07400 vs. TrEMBL
Match: A0A0A0L3E7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G637180 PE=4 SV=1)

HSP 1 Score: 742.7 bits (1916), Expect = 3.0e-211
Identity = 383/502 (76.29%), Postives = 419/502 (83.47%), Query Frame = 1

Query: 1   MGITSLSRNLRDFSHPYFYSIYSFAPPSPFPSSSPSKHFGRFIRFYTAPTSHSAARSPLL 60
           M I  LSRNLR+FS+PYFYSIYSFAP SPF          RF RFYT   S SAA S L+
Sbjct: 1   MEIPCLSRNLRNFSNPYFYSIYSFAPRSPFL-------LYRFSRFYTILASDSAAGSSLI 60

Query: 61  CNSTSQSVPSLCLLERCNGVAKDLNLGLFRPHYRSCRRSFSSDSFEKPQFGTGELNVFKP 120
           CNSTSQSVPSLCL ERCNG   DLNL LFR HYRSCR +FSS S EK Q GTG LNV K 
Sbjct: 61  CNSTSQSVPSLCLFERCNGGTSDLNLALFRHHYRSCR-AFSSFSLEKRQCGTGNLNVSKR 120

Query: 121 NVTSNQFWDIINIIRENQEDLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVRV 180
           NVTSNQ  +IINIIRENQEDLESKLDS NV  TN LV QI  +LN HK+SA RFFNWV V
Sbjct: 121 NVTSNQLSNIINIIRENQEDLESKLDSPNVRLTNVLVGQILEMLNKHKISASRFFNWVSV 180

Query: 181 QSCKFPCNSDIYSLLIDNFGRLDDYEGILPVLNEFRQKGVGLNHKAFEFLHVHLSDEDSI 240
           QSCKFPCNSD+YSLLIDNFGRLDDYEGILPVL EF  KG+ LNHKAF FL + LS+E S+
Sbjct: 181 QSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFGLKGIELNHKAFGFL-LPLSNEHSM 240

Query: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVTEITEKRTSFYNIIVREQ 300
           K+SV +LVKLLNE GG+CR+SG+MALIEMFCSLGSFGMAKFV EITEKR+SFY IIVRE+
Sbjct: 241 KLSVVKLVKLLNEAGGTCRLSGIMALIEMFCSLGSFGMAKFVIEITEKRSSFYYIIVREK 300

Query: 301 CRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEAQNLFEEMLERDCPPNS 360
           C++ DFEGARCTLDEMRQ GC PD GILNYLLSSLCKNDKF EA NL EEMLE++C PNS
Sbjct: 301 CKQKDFEGARCTLDEMRQVGCIPDAGILNYLLSSLCKNDKFGEAHNLLEEMLEQNCSPNS 360

Query: 361 LTFEVIICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYWYTID 420
           LTFE+IICHLC+IGNIESAL +LDMMV+ GL PRLSTHAAFVKSYF+SQRYEEAY Y +D
Sbjct: 361 LTFEIIICHLCKIGNIESALGYLDMMVAGGLMPRLSTHAAFVKSYFSSQRYEEAYQYAVD 420

Query: 421 SSLKHGMAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVLKKLQVQGR 480
           SSLK+   QNATYSLLATLHEKRGNLVDAQK+L EL+DAGL+P+F VY R+LKKLQVQGR
Sbjct: 421 SSLKYVTTQNATYSLLATLHEKRGNLVDAQKILSELMDAGLKPHFHVYTRLLKKLQVQGR 480

Query: 481 EDLANDLKGKFSNVSMQRDIQT 503
            DLANDLK K SNVS+Q  IQT
Sbjct: 481 GDLANDLKRKISNVSLQSGIQT 493

BLAST of Cp4.1LG14g07400 vs. TrEMBL
Match: A0A061FRD6_THECC (Pentatricopeptide repeat superfamily protein, putative OS=Theobroma cacao GN=TCM_036272 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 5.9e-106
Identity = 196/378 (51.85%), Postives = 264/378 (69.84%), Query Frame = 1

Query: 126 QFWDIINIIRENQEDLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVRVQSCKF 185
           Q  +++++IR  Q DLESKLD +NVS + A +  IFR+LNN KVSA RFF W+R    +F
Sbjct: 117 QALEVVSLIRSGQNDLESKLDGMNVSLSEASLNTIFRILNNEKVSALRFFYWIRESHPQF 176

Query: 186 PCNSDIYSLLIDNFGRLDDYEGILPVLNEFRQKGVGLNHKAFEFLHVHLSDEDSIKISVE 245
             NSDI SL+IDN GRLDD++    +LN+F+  G+ LNH+AF F+ V +S + + K S+ 
Sbjct: 177 YHNSDICSLVIDNCGRLDDFDSAASLLNDFKLHGIRLNHRAFGFVPVMISSKAATKKSIC 236

Query: 246 RLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVTEITEKRTSFYNIIVREQCRRND 305
           ++V++LN +GGSC +SG+ ALIEM C+L SF MAK+V    EKR S YNI++R QCR+ D
Sbjct: 237 KVVEVLNRIGGSCSVSGIHALIEMLCALESFEMAKYVIAKAEKRLSNYNILIRGQCRKGD 296

Query: 306 FEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEAQNLFEEMLERDCPPNSLTFEV 365
           FEGAR  LD M + GC+P+    N +LS LCKNDK +EA  L E+MLE  CP ++LTFE+
Sbjct: 297 FEGAREILDWMIKVGCNPNSQTFNNILSCLCKNDKVAEACQLLEQMLESGCPLDALTFEI 356

Query: 366 IICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYWYTIDSSLKH 425
            IC+ C +G ++ A  +L+ M S G+EPR++THAAFVK YF  Q+YEEA+ Y +  S K+
Sbjct: 357 FICYYCGLGRLDMAFEWLNKMDSSGIEPRITTHAAFVKGYFKLQQYEEAHNYVVVCSDKY 416

Query: 426 GMAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVLKKLQVQGREDLAN 485
             A N  YSLLA+LH KRG  V AQ +L E+I+ GL+PNF VYM V K+LQ  GREDLA 
Sbjct: 417 KQASNIVYSLLASLHRKRGKPVIAQSILSEMIEKGLKPNFAVYMTVTKQLQKSGREDLAG 476

Query: 486 DLKGKFSNVSMQRDIQTG 504
           +L+  FS++  Q     G
Sbjct: 477 NLRSSFSSLISQPSADNG 494

BLAST of Cp4.1LG14g07400 vs. TrEMBL
Match: B9IQC0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s10460g PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.2e-98
Identity = 197/412 (47.82%), Postives = 266/412 (64.56%), Query Frame = 1

Query: 81  AKDLNLGLFRPHYRSCRRSFSSDSFEK-PQFGTGELNVFKPNVTSNQFWDIINIIRENQE 140
           ++ LNL  F+       R + + SF+   + GTG +   +P     Q   II++I+ ++ 
Sbjct: 18  SQSLNLYFFKSSIHGYLRGYKTSSFDVYKEMGTGRV---RPKAMQKQVAYIIDLIKRDEY 77

Query: 141 DLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVRVQSCKFPCNSDIYSLLIDNF 200
           DLE KL SL+V  + A V  +F VLN+ KVSA RFF W+R    +  CNSDI SL+IDN 
Sbjct: 78  DLEYKLGSLSVKLSIASVTLVFHVLNSEKVSALRFFRWIRHWQPELRCNSDICSLVIDNC 137

Query: 201 GRLDDYEGILPVLNEFRQKGVGLNHKAFEFLHVHLSDEDSIKISVERLVKLLNEVGGSCR 260
           GRLDDY+ +  +LNEF +  + L  KAFEFLHV     +S+  S +R++ LL EV GSC 
Sbjct: 138 GRLDDYDAMRSLLNEFNENQLCLTKKAFEFLHVMNVTNESLVESTQRVIVLLLEVRGSC- 197

Query: 261 ISGVMALIEMFCSLGSFGMAKFVTEITEKRTSFYNIIVREQCRRNDFEGARCTLDEMRQA 320
              V +LIEMF  LGSF M +FV + TE++ S+Y I +RE CRR DF+G R   DEMR+ 
Sbjct: 198 YGWVSSLIEMFSVLGSFDMVEFVMKKTERKISYYYIFIREMCRRCDFKGVRDIQDEMRKE 257

Query: 321 GCSPDVGILNYLLSSLCKNDKFSEAQNLFEEMLERDCPPNSLTFEVIICHLCEIGNIESA 380
           G   +  I NYL+S L KN ++++A  +  EM ++DCPP++LTFE+ I + C  G  E A
Sbjct: 258 GFELNARIYNYLISCLLKNGEYADACKVLTEMQDKDCPPDALTFEIFIYYCCNNGKTEIA 317

Query: 381 LNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYWYTIDSSLKHGMAQNATYSLLATL 440
            ++ D +V+RGLEPRLSTHAAF+K +FNS++YEEAY Y +DS  K+       YSLLA L
Sbjct: 318 CHYFDEIVARGLEPRLSTHAAFIKGFFNSEQYEEAYKYVVDSDKKYKCTSCMNYSLLARL 377

Query: 441 HEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVLKKLQVQGREDLANDLKGKF 492
           H+KRGNLV AQ +L E+I  GLRP F VYM+V   L   GRE LA DL+ +F
Sbjct: 378 HQKRGNLVIAQNILSEMIKKGLRPYFKVYMKVFNCLNKSGRETLATDLQEQF 425

BLAST of Cp4.1LG14g07400 vs. TrEMBL
Match: A0A0D2N7N2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G097200 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.3e-97
Identity = 207/488 (42.42%), Postives = 295/488 (60.45%), Query Frame = 1

Query: 9   NLRDFSHPYFY-SIYSFAPPS---PFPSSSPSKHFGRFIRFYTAPTSHSAARSPLLCNST 68
           N + F  P++Y S   FA  S   P   S+P          +T PT HS+  +P + +S 
Sbjct: 12  NQKLFPSPHYYLSSLLFALSSKSLPPLCSTPQTQILSSHELHTIPTPHSS--TPFISSSV 71

Query: 69  SQSVPSLCLLERCNGVAKDLNLGLFRPHYRSCRRSFSSDSFEKPQFGTGELNVFKPNVTS 128
           S   PS              +  L +P + S  R FS+ S              + N + 
Sbjct: 72  SSPFPS---------TQYPFSRFLNKPDF-SWFRGFSASS--------------RTNASG 131

Query: 129 NQFWDIINIIRENQEDLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVRVQSCK 188
            Q  +IIN+IR    DLESKLD++N+  +  L+  IFR+LN  K+ A RFFNW+R    +
Sbjct: 132 KQVSEIINLIRRGSNDLESKLDAMNIRLSEVLLNTIFRILNREKIPALRFFNWIRKSHPE 191

Query: 189 FPCNSDIYSLLIDNFGRLDDYEGILPVLNEFRQKGVGLNHKAFEFLHVHLSDEDSIKISV 248
           F  +SDIYSL++DN GR DD++ I  +LN+FR  G+ LN KAF +L V +S++ ++K S+
Sbjct: 192 FRHDSDIYSLVVDNCGRSDDFDSIFNLLNDFRIHGICLNQKAFSYLPVMVSNQAAMKESI 251

Query: 249 ERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVTEITEKRTSFYNIIVREQCRRN 308
            + +++LN++GGSC ++G  ALIEM C+LGSF MA++V   TEKR S Y I++R + R+ 
Sbjct: 252 CKTMEILNKIGGSCGVTGTHALIEMLCALGSFEMAEYVITKTEKRLSNYGILIRSRSRKG 311

Query: 309 DFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEAQNLFEEMLERDCPPNSLTFE 368
            FE A+  LDEM   G +P+  I NY+L  L K D+  +A  L E M+E  CPPN+LT+E
Sbjct: 312 HFEEAKRVLDEMTGTGITPNCQIFNYVLGCLQKTDQTDKACQLLEFMVENGCPPNALTYE 371

Query: 369 VIICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYWYTIDSSLK 428
           + IC+LC  G ++ A ++L+ M S+G+EPR +THAA +K YF  Q+YE+A+ Y +  S K
Sbjct: 372 IFICNLCRHGKLDMAFDWLNKMESKGIEPRPTTHAALIKGYFKLQQYEQAHQYVVVCSDK 431

Query: 429 HGMAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVLKKLQVQGREDLA 488
           +    N  YSLLA+L+ K+G  V AQ VL E+I+ GL PNF VYM V K LQ  GREDLA
Sbjct: 432 YKTVSNMIYSLLASLYRKQGKPVMAQSVLSEMIEKGLSPNFTVYMHVRKHLQKIGREDLA 473

Query: 489 NDLKGKFS 493
            +L+  FS
Sbjct: 492 RNLESSFS 473

BLAST of Cp4.1LG14g07400 vs. TrEMBL
Match: A0A067E996_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047221mg PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 8.0e-95
Identity = 218/517 (42.17%), Postives = 299/517 (57.83%), Query Frame = 1

Query: 5   SLSRNLRDFS--HPYFYSIYSFAPPS-------------PFPSSSPSKHFGRFIRFYTAP 64
           S  +NLR  S  +PYF   Y F+  S             P PS  PS +  +F    T+ 
Sbjct: 6   SSKKNLRYLSIANPYFCLRYLFSNSSQSYFSCNLKTLVSPKPSPIPSLNSDQFQSKPTSN 65

Query: 65  TSHS---AARSPLLCNSTSQSVPSLCLL--ERCNGVAKDLNLGLFRPHYRSCRRSFSSDS 124
            S+S   +  S   C+ T  S  S   L    CNG               SCR   S   
Sbjct: 66  PSYSFISSIGSSSFCHLTHPSCHSSQNLYFSNCNG---------------SCRSQISKLG 125

Query: 125 FEKPQFGTGELNVFKPNVTSNQFWDIINIIRENQEDLESKLDSLNVSFTNALVAQIFRVL 184
               +  +    V  P  T  Q  +II ++R    + ESKL S++VS +NA V +I RVL
Sbjct: 126 LLTSRCISSFAMVNGPYATPKQVSEIIELLRSGDSETESKLLSMSVSLSNASVIEILRVL 185

Query: 185 NNHKVSAFRFFNWVRVQSCKFPCNSDIYSLLIDNFGRLDDYEGILPVLNEFRQKGVGLNH 244
           N+ KVSA  F  ++R    +F  NSDI SL+IDN GRLDDYE +  +LN+F    V LN 
Sbjct: 186 NSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNE 245

Query: 245 KAFEFLHVHLSDEDSIKISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVTE 304
           KAF FL V +S +   K  + R+V++LN+VGGSC +SGV ALIEMF  LG + MAK+V +
Sbjct: 246 KAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIK 305

Query: 305 ITEKRTSFYNIIVREQCRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEA 364
            TE++ S+YNI+++E CRR DF+G R  L EMRQ GC P     NY+L  LCKN + ++A
Sbjct: 306 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 365

Query: 365 QNLFEEMLERDCPPNSLTFEVIICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKS 424
             L EEML R+C P+++T+E+ I + C +G  + A NF + MV RGL+PRL+THAAF+K 
Sbjct: 366 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 425

Query: 425 YFNSQRYEEAYWYTIDSSLKHGMAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPN 484
           YF   RYE+AY Y + S+ K+  + N  YSLLA+LH+K  N V A+ VL E++  GLRPN
Sbjct: 426 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 485

Query: 485 FPVYMRVLKKLQVQGREDLANDLKGKFSNVSMQRDIQ 502
             VY RVLK L    +E +A  L  ++S++S+   ++
Sbjct: 486 VSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507

BLAST of Cp4.1LG14g07400 vs. TAIR10
Match: AT1G09820.1 (AT1G09820.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 111.3 bits (277), Expect = 1.7e-24
Identity = 102/390 (26.15%), Postives = 171/390 (43.85%), Query Frame = 1

Query: 116 NVFKPNVTSNQFWDI--INIIRENQEDLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFR 175
           NVF  NV  N       +N  R+  ED++    S NV   N L+    ++  N K+    
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 281

Query: 176 FFNWVRVQSCKFPCNSDIYSLLIDNFGRLDDYEGILPVLNEFRQKGVGLNHKAFEFLHVH 235
                 V++   P N   +++LID F + D+  G + V  E   + V  N  ++  L   
Sbjct: 282 AVLKEMVENDVSP-NLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING 341

Query: 236 LSDEDSIKISVERLVKLLNEVGGSCRISGVMALIEMFC-------SLGSFGMAKFVTEIT 295
           L +   I  ++    K+++  G    +    ALI  FC       +L  FG  K    + 
Sbjct: 342 LCNGGKISEAISMRDKMVS-AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP 401

Query: 296 EKRTSFYNIIVREQCRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEAQN 355
             R   YN+++   C+    +      +EM + G  PDVG  N L++ LC+N     A+ 
Sbjct: 402 TTR--MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 461

Query: 356 LFEEMLERDCPPNSLTFEVIICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYF 415
           LF+++  +   P+ +TF +++   C  G    A   L  M   GL+PR  T+   +K Y 
Sbjct: 462 LFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 521

Query: 416 NSQRYEEAYWYTIDSSLKHGMAQN-ATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNF 475
                + A         +  +  N A+Y++L   + ++G L DA  +L E+++ GL PN 
Sbjct: 522 KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 581

Query: 476 PVYMRVLKKLQVQGREDLANDLKGKFSNVS 496
             Y  V +++  QG      D++G   NVS
Sbjct: 582 ITYEIVKEEMVDQG---FVPDIEGHLFNVS 603

BLAST of Cp4.1LG14g07400 vs. TAIR10
Match: AT1G52640.1 (AT1G52640.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 1.1e-21
Identity = 91/371 (24.53%), Postives = 156/371 (42.05%), Query Frame = 1

Query: 125 NQFWDIINIIRENQEDLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVRVQSCK 184
           N+   +++  R  ++DLE  L + +   ++ LV Q+ +   N    A RFF W R +   
Sbjct: 39  NEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWAR-RIPD 98

Query: 185 FPCNSDIYSLLIDNFGRLDDYEGILPVLNEFRQKGV-GLNHKAFEFLHVHLSDEDSIKIS 244
           F  + + Y +L++  G    +  +   L E R+     ++ K F ++        ++   
Sbjct: 99  FAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVF-WIVFRAYSRANLPSE 158

Query: 245 VERLVKLLNEVGGSCRISGVMALIEMFCSLGS-------FGMAKFVTEITEKRTSFYNII 304
             R    + E G    +  +  L+   C           FG AK    +   +T  Y+I+
Sbjct: 159 ACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKT--YSIL 218

Query: 305 VREQCRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEAQNLFEEMLERDC 364
           VR   R  D  GAR   DEM +  C  D+   N LL +LCK+        +F+EM     
Sbjct: 219 VRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGL 278

Query: 365 PPNSLTFEVIICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYW 424
            P++ +F + I   C+ G++ SA   LD M    L P + T    +K+   +++ ++AY 
Sbjct: 279 KPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYL 338

Query: 425 YTIDSSLKHGMAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVLKKLQ 484
              +   K       TY+ +   H     +  A K+L  +      P+   Y  VLK L 
Sbjct: 339 LLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLI 398

Query: 485 VQGREDLANDL 488
             GR D A ++
Sbjct: 399 RIGRFDRATEI 405

BLAST of Cp4.1LG14g07400 vs. TAIR10
Match: AT5G61400.1 (AT5G61400.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 98.6 bits (244), Expect = 1.2e-20
Identity = 59/233 (25.32%), Postives = 108/233 (46.35%), Query Frame = 1

Query: 254 VGGSCRISGVMALIEMFCSLGSFGMAKFVTEITEKRTSFYNIIVREQCRRNDFEGARCTL 313
           V G C+   ++    +F  +  FG+        +     YN ++   C+  +   A   L
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGV--------DPNLYVYNCLIHGHCKSGNMLEAVGLL 370

Query: 314 DEMRQAGCSPDVGILNYLLSSLCKNDKFSEAQNLFEEMLERDCPPNSLTFEVIICHLCEI 373
            EM     SPDV     L++ LC  D+ +EA  LF++M      P+S T+  +I   C+ 
Sbjct: 371 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 430

Query: 374 GNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYWYTIDSSLKHGMAQNATY 433
            N+E AL+    M + G+EP + T +  +  Y N +  + A     + ++K  +    TY
Sbjct: 431 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 490

Query: 434 SLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVLKKLQVQGREDLAND 487
           + L   H K  N+ +A ++  ++++AG+ PN   +  ++     +GR  +A D
Sbjct: 491 TALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAID 535

BLAST of Cp4.1LG14g07400 vs. TAIR10
Match: AT1G12775.1 (AT1G12775.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-20
Identity = 56/208 (26.92%), Postives = 101/208 (48.56%), Query Frame = 1

Query: 293 YNIIVREQCRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEAQNLFEEML 352
           YN ++   C    ++     L +M +   SP+V   + L+ S  K  K  EA  L +EM+
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360

Query: 353 ERDCPPNSLTFEVIICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYE 412
           +R   PN++T+  +I   C+   +E A+  +D+M+S+G +P + T    +  Y  + R +
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420

Query: 413 EAYWYTIDSSLKHGMAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVL 472
           +      + SL+  +A   TY+ L     + G L  A+K+  E++   +RP+   Y  +L
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480

Query: 473 KKLQVQGREDLANDLKGKFSNVSMQRDI 501
             L   G  + A ++ GK     M+ DI
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDI 508

BLAST of Cp4.1LG14g07400 vs. TAIR10
Match: AT1G74580.1 (AT1G74580.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 96.3 bits (238), Expect = 5.8e-20
Identity = 69/285 (24.21%), Postives = 124/285 (43.51%), Query Frame = 1

Query: 192 YSLLIDNFGRLDDYEGILPVLNEFRQKGVGLNHKAFEFLHVHLSDEDSIKISVERLVKLL 251
           Y  LID      +    L + NE   KG+  N   +  L   LS++  I +   +L   +
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI-LEAAQLANEM 418

Query: 252 NEVGGSCRISGVMALIEMFCSLGSFGMAKFVTEITEKRTSF-----YNIIVREQCRRNDF 311
           +E G    +     L+   C +G    A  + ++   +  F     +NI++     +   
Sbjct: 419 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 478

Query: 312 EGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEAQNLFEEMLERDCPPNSLTFEVI 371
           E A   LD M   G  PDV   N LL+ LCK  KF +    ++ M+E+ C PN  TF ++
Sbjct: 479 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 538

Query: 372 ICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYWYTIDSSLKHG 431
           +  LC    ++ AL  L+ M ++ + P   T    +  +  +   + A  YT+   ++  
Sbjct: 539 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA--YTLFRKMEEA 598

Query: 432 ---MAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVY 469
               +   TY+++     ++ N+  A+K+  E++D  L P+   Y
Sbjct: 599 YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640

BLAST of Cp4.1LG14g07400 vs. NCBI nr
Match: gi|700199969|gb|KGN55127.1| (hypothetical protein Csa_4G637180 [Cucumis sativus])

HSP 1 Score: 742.7 bits (1916), Expect = 4.4e-211
Identity = 383/502 (76.29%), Postives = 419/502 (83.47%), Query Frame = 1

Query: 1   MGITSLSRNLRDFSHPYFYSIYSFAPPSPFPSSSPSKHFGRFIRFYTAPTSHSAARSPLL 60
           M I  LSRNLR+FS+PYFYSIYSFAP SPF          RF RFYT   S SAA S L+
Sbjct: 1   MEIPCLSRNLRNFSNPYFYSIYSFAPRSPFL-------LYRFSRFYTILASDSAAGSSLI 60

Query: 61  CNSTSQSVPSLCLLERCNGVAKDLNLGLFRPHYRSCRRSFSSDSFEKPQFGTGELNVFKP 120
           CNSTSQSVPSLCL ERCNG   DLNL LFR HYRSCR +FSS S EK Q GTG LNV K 
Sbjct: 61  CNSTSQSVPSLCLFERCNGGTSDLNLALFRHHYRSCR-AFSSFSLEKRQCGTGNLNVSKR 120

Query: 121 NVTSNQFWDIINIIRENQEDLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVRV 180
           NVTSNQ  +IINIIRENQEDLESKLDS NV  TN LV QI  +LN HK+SA RFFNWV V
Sbjct: 121 NVTSNQLSNIINIIRENQEDLESKLDSPNVRLTNVLVGQILEMLNKHKISASRFFNWVSV 180

Query: 181 QSCKFPCNSDIYSLLIDNFGRLDDYEGILPVLNEFRQKGVGLNHKAFEFLHVHLSDEDSI 240
           QSCKFPCNSD+YSLLIDNFGRLDDYEGILPVL EF  KG+ LNHKAF FL + LS+E S+
Sbjct: 181 QSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFGLKGIELNHKAFGFL-LPLSNEHSM 240

Query: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVTEITEKRTSFYNIIVREQ 300
           K+SV +LVKLLNE GG+CR+SG+MALIEMFCSLGSFGMAKFV EITEKR+SFY IIVRE+
Sbjct: 241 KLSVVKLVKLLNEAGGTCRLSGIMALIEMFCSLGSFGMAKFVIEITEKRSSFYYIIVREK 300

Query: 301 CRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEAQNLFEEMLERDCPPNS 360
           C++ DFEGARCTLDEMRQ GC PD GILNYLLSSLCKNDKF EA NL EEMLE++C PNS
Sbjct: 301 CKQKDFEGARCTLDEMRQVGCIPDAGILNYLLSSLCKNDKFGEAHNLLEEMLEQNCSPNS 360

Query: 361 LTFEVIICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYWYTID 420
           LTFE+IICHLC+IGNIESAL +LDMMV+ GL PRLSTHAAFVKSYF+SQRYEEAY Y +D
Sbjct: 361 LTFEIIICHLCKIGNIESALGYLDMMVAGGLMPRLSTHAAFVKSYFSSQRYEEAYQYAVD 420

Query: 421 SSLKHGMAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVLKKLQVQGR 480
           SSLK+   QNATYSLLATLHEKRGNLVDAQK+L EL+DAGL+P+F VY R+LKKLQVQGR
Sbjct: 421 SSLKYVTTQNATYSLLATLHEKRGNLVDAQKILSELMDAGLKPHFHVYTRLLKKLQVQGR 480

Query: 481 EDLANDLKGKFSNVSMQRDIQT 503
            DLANDLK K SNVS+Q  IQT
Sbjct: 481 GDLANDLKRKISNVSLQSGIQT 493

BLAST of Cp4.1LG14g07400 vs. NCBI nr
Match: gi|778695919|ref|XP_004141361.2| (PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like [Cucumis sativus])

HSP 1 Score: 732.6 bits (1890), Expect = 4.5e-208
Identity = 377/494 (76.32%), Postives = 413/494 (83.60%), Query Frame = 1

Query: 1   MGITSLSRNLRDFSHPYFYSIYSFAPPSPFPSSSPSKHFGRFIRFYTAPTSHSAARSPLL 60
           M I  LSRNLR+FS+PYFYSIYSFAP SPF          RF RFYT   S SAA S L+
Sbjct: 1   MEIPCLSRNLRNFSNPYFYSIYSFAPRSPFL-------LYRFSRFYTILASDSAAGSSLI 60

Query: 61  CNSTSQSVPSLCLLERCNGVAKDLNLGLFRPHYRSCRRSFSSDSFEKPQFGTGELNVFKP 120
           CNSTSQSVPSLCL ERCNG   DLNL LFR HYRSCR +FSS S EK Q GTG LNV K 
Sbjct: 61  CNSTSQSVPSLCLFERCNGGTSDLNLALFRHHYRSCR-AFSSFSLEKRQCGTGNLNVSKR 120

Query: 121 NVTSNQFWDIINIIRENQEDLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVRV 180
           NVTSNQ  +IINIIRENQEDLESKLDS NV  TN LV QI  +LN HK+SA RFFNWV V
Sbjct: 121 NVTSNQLSNIINIIRENQEDLESKLDSPNVRLTNVLVGQILEMLNKHKISASRFFNWVSV 180

Query: 181 QSCKFPCNSDIYSLLIDNFGRLDDYEGILPVLNEFRQKGVGLNHKAFEFLHVHLSDEDSI 240
           QSCKFPCNSD+YSLLIDNFGRLDDYEGILPVL EF  KG+ LNHKAF FL + LS+E S+
Sbjct: 181 QSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFGLKGIELNHKAFGFL-LPLSNEHSM 240

Query: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVTEITEKRTSFYNIIVREQ 300
           K+SV +LVKLLNE GG+CR+SG+MALIEMFCSLGSFGMAKFV EITEKR+SFY IIVRE+
Sbjct: 241 KLSVVKLVKLLNEAGGTCRLSGIMALIEMFCSLGSFGMAKFVIEITEKRSSFYYIIVREK 300

Query: 301 CRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEAQNLFEEMLERDCPPNS 360
           C++ DFEGARCTLDEMRQ GC PD GILNYLLSSLCKNDKF EA NL EEMLE++C PNS
Sbjct: 301 CKQKDFEGARCTLDEMRQVGCIPDAGILNYLLSSLCKNDKFGEAHNLLEEMLEQNCSPNS 360

Query: 361 LTFEVIICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYWYTID 420
           LTFE+IICHLC+IGNIESAL +LDMMV+ GL PRLSTHAAFVKSYF+SQRYEEAY Y +D
Sbjct: 361 LTFEIIICHLCKIGNIESALGYLDMMVAGGLMPRLSTHAAFVKSYFSSQRYEEAYQYAVD 420

Query: 421 SSLKHGMAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVLKKLQVQGR 480
           SSLK+   QNATYSLLATLHEKRGNLVDAQK+L EL+DAGL+P+F VY R+LKKLQVQGR
Sbjct: 421 SSLKYVTTQNATYSLLATLHEKRGNLVDAQKILSELMDAGLKPHFHVYTRLLKKLQVQGR 480

Query: 481 EDLANDLKGKFSNV 495
            DLANDLK K SN+
Sbjct: 481 GDLANDLKRKISNL 485

BLAST of Cp4.1LG14g07400 vs. NCBI nr
Match: gi|659105297|ref|XP_008453062.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like [Cucumis melo])

HSP 1 Score: 637.1 bits (1642), Expect = 2.6e-179
Identity = 322/426 (75.59%), Postives = 359/426 (84.27%), Query Frame = 1

Query: 77  CNGVAKDLNLGLFRPHYRSCRRSFSSDSFEKPQFGTGELNVFKPNVTSNQFWDIINIIRE 136
           CNG   DLNL LFR HYRSCR SFSS S +K Q GTG LN+ KP  TS +FW II+II+ 
Sbjct: 33  CNGRTSDLNLALFRHHYRSCR-SFSSFSLKKLQRGTGNLNLSKPIATSEKFWQIIDIIQI 92

Query: 137 NQEDLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVRVQSCKFPCNSDIYSLLI 196
           NQEDLESKLDSLNV  TN LV +I  +LN  K+SAFRFFNWV VQ C+FP NSD+YSLLI
Sbjct: 93  NQEDLESKLDSLNVRLTNVLVVEILGMLNKRKISAFRFFNWVSVQWCRFPSNSDVYSLLI 152

Query: 197 DNFGRLDDYEGILPVLNEFRQKGVGLNHKAFEFLHVHLSDEDSIKISVERLVKLLNEVGG 256
           DNFGRLDDYEGILP L EF +KG+ LNHKAF FL + L++EDS+K SV +LVK+LN+  G
Sbjct: 153 DNFGRLDDYEGILPFLIEFSRKGIELNHKAFGFL-LPLANEDSMKSSVIKLVKMLNKAEG 212

Query: 257 SCRISGVMALIEMFCSLGSFGMAKFVTEITEKRTSFYNIIVREQCRRNDFEGARCTLDEM 316
           +CRISGV ALIEMFCS+GS  MAKFV EITEKR+SFY IIVREQC+R DFEGARCTLDEM
Sbjct: 213 TCRISGVKALIEMFCSVGSSEMAKFVIEITEKRSSFYYIIVREQCQRKDFEGARCTLDEM 272

Query: 317 RQAGCSPDVGILNYLLSSLCKNDKFSEAQNLFEEMLERDCPPNSLTFEVIICHLCEIGNI 376
           RQAGC PD GI NYLLSSLCKNDKF EA NLFEEMLE++CPPNSL+FEVIICHLC+IGNI
Sbjct: 273 RQAGCLPDAGIFNYLLSSLCKNDKFGEAHNLFEEMLEQNCPPNSLSFEVIICHLCKIGNI 332

Query: 377 ESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYWYTIDSSLKHGMAQNATYSLL 436
           ESAL FLD MV+RGL+PRLSTHA FVKSYF S+RYEEAY Y +DSS K+ M QNATYSLL
Sbjct: 333 ESALGFLDTMVARGLQPRLSTHATFVKSYFYSRRYEEAYQYAVDSSSKYVMTQNATYSLL 392

Query: 437 ATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVLKKLQVQGREDLANDLKGKFSNVSM 496
           ATLHEKRGNLVDAQK+L EL+DAGL+PNF V  RVLKKLQVQGREDLANDLKGK SNV +
Sbjct: 393 ATLHEKRGNLVDAQKILSELVDAGLKPNFHVCKRVLKKLQVQGREDLANDLKGKLSNVGL 452

Query: 497 QRDIQT 503
           Q  I+T
Sbjct: 453 QIGIRT 456

BLAST of Cp4.1LG14g07400 vs. NCBI nr
Match: gi|1009137613|ref|XP_015886150.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g46100-like [Ziziphus jujuba])

HSP 1 Score: 394.8 bits (1013), Expect = 2.2e-106
Identity = 224/497 (45.07%), Postives = 303/497 (60.97%), Query Frame = 1

Query: 7   SRNLRDFSHPYF--------YSIYSFAPPSPFPSSSPSKHFGRFIRFYTAPTS------H 66
           SR L + S+PYF        Y   +F P +       S  F   I+F++  T       +
Sbjct: 120 SRYLLNSSNPYFLISETSKYYIPLAFLPKNTVFPVPTSAIFFNSIQFHSKSTFIPLNSLN 179

Query: 67  SAARSPLLCNSTSQSVPSLCLLERCNGVAKD---LNLGLFRPHYRSCRRSFSS------- 126
           S++ S  +C     S  S  LL  C         +NL L +P +    +S S+       
Sbjct: 180 SSSGSSSVCAPAHPSSQSSHLLRSCGSFGDRGFLVNLRLLKPSFHGGCQSLSTLSSDVSL 239

Query: 127 --------DSFEKPQFGTGELNVFKPNVTSNQFWDIINIIRENQEDLESKLDSLNVSFTN 186
                    S E  + G       + N T  Q  +II++IR  + DLESKLDS+NVSF+ 
Sbjct: 240 SSMLLESLSSNEDSRMGNPGSERIRWNATPKQVSEIIDMIRRGENDLESKLDSINVSFSV 299

Query: 187 ALVAQIFRVLNNHKVSAFRFFNWVRVQSCKFPCNSDIYSLLIDNFGRLDDYEGILPVLNE 246
           A V QIF VLN  KVSA RFF+W+R        N D+ SL+IDN GRL+D+E +L ++N 
Sbjct: 300 ASVFQIFGVLNCEKVSALRFFDWIRGSQPNICSNYDVCSLVIDNCGRLNDFEAMLSIMNG 359

Query: 247 FRQKGVGLNHKAFEFLHVHLSDEDSIKISVERLVKLLNEVGGSCRISGVMALIEMFCSLG 306
           F Q+G+ L  KAF FL V + D+  +  S+ ++V++LNEVGGSC  SGV +LIEMF  LG
Sbjct: 360 FAQRGIRLTQKAFGFLTVLILDKPLVMDSIRKVVRVLNEVGGSCGNSGVQSLIEMFSILG 419

Query: 307 SFGMAKFVTEITEKRTSFYNIIVREQCRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSS 366
           SF MAKFV ++TE++ S+Y +I+RE+CRR DF GA   +DEMRQ GC P V I NY+LS+
Sbjct: 420 SFEMAKFVIQMTERKVSYYYMIIREKCRRCDFVGAMAIIDEMRQLGCEPTVNIYNYILST 479

Query: 367 LCKNDKFSEAQNLFEEMLERDCPPNSLTFEVIICHLCEIGNIESALNFLDMMVSRGLEPR 426
           L KN+  +EA  L +EM E++CPP+ LTFE++ICH C++G    A   LD MVSRGLEPR
Sbjct: 480 LFKNNGSAEASKLLKEMEEKNCPPDELTFEILICHSCKLGEFVYAKELLDGMVSRGLEPR 539

Query: 427 LSTHAAFVKSYFNSQRYEEAYWYTIDSSLKHGMAQNATYSLLATLHEKRGNLVDAQKVLC 472
           +STH A VK+YF+ QRYEEAY Y +D+SLKH  + N  YS+L +LH+K+GN+V A  VL 
Sbjct: 540 VSTHVALVKAYFDMQRYEEAYNYVVDTSLKHRYSSNMIYSVLISLHQKKGNVVTALSVLS 599

BLAST of Cp4.1LG14g07400 vs. NCBI nr
Match: gi|590602903|ref|XP_007019869.1| (Pentatricopeptide repeat superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 392.9 bits (1008), Expect = 8.5e-106
Identity = 196/378 (51.85%), Postives = 264/378 (69.84%), Query Frame = 1

Query: 126 QFWDIINIIRENQEDLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVRVQSCKF 185
           Q  +++++IR  Q DLESKLD +NVS + A +  IFR+LNN KVSA RFF W+R    +F
Sbjct: 117 QALEVVSLIRSGQNDLESKLDGMNVSLSEASLNTIFRILNNEKVSALRFFYWIRESHPQF 176

Query: 186 PCNSDIYSLLIDNFGRLDDYEGILPVLNEFRQKGVGLNHKAFEFLHVHLSDEDSIKISVE 245
             NSDI SL+IDN GRLDD++    +LN+F+  G+ LNH+AF F+ V +S + + K S+ 
Sbjct: 177 YHNSDICSLVIDNCGRLDDFDSAASLLNDFKLHGIRLNHRAFGFVPVMISSKAATKKSIC 236

Query: 246 RLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVTEITEKRTSFYNIIVREQCRRND 305
           ++V++LN +GGSC +SG+ ALIEM C+L SF MAK+V    EKR S YNI++R QCR+ D
Sbjct: 237 KVVEVLNRIGGSCSVSGIHALIEMLCALESFEMAKYVIAKAEKRLSNYNILIRGQCRKGD 296

Query: 306 FEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEAQNLFEEMLERDCPPNSLTFEV 365
           FEGAR  LD M + GC+P+    N +LS LCKNDK +EA  L E+MLE  CP ++LTFE+
Sbjct: 297 FEGAREILDWMIKVGCNPNSQTFNNILSCLCKNDKVAEACQLLEQMLESGCPLDALTFEI 356

Query: 366 IICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYWYTIDSSLKH 425
            IC+ C +G ++ A  +L+ M S G+EPR++THAAFVK YF  Q+YEEA+ Y +  S K+
Sbjct: 357 FICYYCGLGRLDMAFEWLNKMDSSGIEPRITTHAAFVKGYFKLQQYEEAHNYVVVCSDKY 416

Query: 426 GMAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVLKKLQVQGREDLAN 485
             A N  YSLLA+LH KRG  V AQ +L E+I+ GL+PNF VYM V K+LQ  GREDLA 
Sbjct: 417 KQASNIVYSLLASLHRKRGKPVIAQSILSEMIEKGLKPNFAVYMTVTKQLQKSGREDLAG 476

Query: 486 DLKGKFSNVSMQRDIQTG 504
           +L+  FS++  Q     G
Sbjct: 477 NLRSSFSSLISQPSADNG 494

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PPR27_ARATH3.1e-2326.15Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana GN... [more]
PPR78_ARATH1.9e-2024.53Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidop... [more]
PP440_ARATH2.1e-1925.32Pentatricopeptide repeat-containing protein At5g61400 OS=Arabidopsis thaliana GN... [more]
PPR39_ARATH2.7e-1926.92Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop... [more]
PP120_ARATH1.0e-1824.21Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th... [more]
Match NameE-valueIdentityDescription
A0A0A0L3E7_CUCSA3.0e-21176.29Uncharacterized protein OS=Cucumis sativus GN=Csa_4G637180 PE=4 SV=1[more]
A0A061FRD6_THECC5.9e-10651.85Pentatricopeptide repeat superfamily protein, putative OS=Theobroma cacao GN=TCM... [more]
B9IQC0_POPTR1.2e-9847.82Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s10460g PE=4 SV=1[more]
A0A0D2N7N2_GOSRA1.3e-9742.42Uncharacterized protein OS=Gossypium raimondii GN=B456_001G097200 PE=4 SV=1[more]
A0A067E996_CITSI8.0e-9542.17Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047221mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G09820.11.7e-2426.15 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT1G52640.11.1e-2124.53 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G61400.11.2e-2025.32 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G12775.11.5e-2026.92 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G74580.15.8e-2024.21 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|700199969|gb|KGN55127.1|4.4e-21176.29hypothetical protein Csa_4G637180 [Cucumis sativus][more]
gi|778695919|ref|XP_004141361.2|4.5e-20876.32PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like [Cucumis s... [more]
gi|659105297|ref|XP_008453062.1|2.6e-17975.59PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial-... [more]
gi|1009137613|ref|XP_015886150.1|2.2e-10645.07PREDICTED: pentatricopeptide repeat-containing protein At5g46100-like [Ziziphus ... [more]
gi|590602903|ref|XP_007019869.1|8.5e-10651.85Pentatricopeptide repeat superfamily protein, putative [Theobroma cacao][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g07400.1Cp4.1LG14g07400.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 293..321
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 323..371
score: 1.0
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 362..393
score: 7.8E-5coord: 329..359
score: 6.6E-7coord: 293..325
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 188..222
score: 7.607coord: 289..323
score: 9.723coord: 429..463
score: 8.166coord: 359..393
score: 10.709coord: 324..358
score: 11
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 327..458
score: 2.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 328..465
score: 7.0
NoneNo IPR availableunknownCoilCoilcoord: 131..151
scor
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 141..501
score: 1.1
NoneNo IPR availablePANTHERPTHR24015:SF482SUBFAMILY NOT NAMEDcoord: 141..501
score: 1.1

The following gene(s) are paralogous to this gene:

None