Cp4.1LG14g07390 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG14g07390
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Vacuolar sorting-associated protein VTA1
Location	Cp4.1LG14 : 5555057 .. 5564345 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGTCATTTTGTTTTTTTGTTTAAGATTTGAAGTTTCCATTGCATTCGACTCTCCAAGTTTTCAACCAAAATTGTAAGATCACCTTTGATCGTCTCAGATTCGGAGCTCCCAGTGAAAGATGGCGAGCGAGACCGAGCCGGCGAAGCTCCTTCTGCCCTACCTCCAGCGAGCGGACGAATTGCAGAAGCACGAACCTCTTGTCGCATATTACTGTAATTCTTAGTTTCAATTCTTCTTCTAGGCCCTAATTGTTTTGATTCTTGATTGCTTGGGCGTTTTCCATGTTTAGGTCGATTATATGCTATGGAACGTGGGCTAAGGATTCCACAGGGCGAACGTACCAAGACCACAAATGCCCTCCTTGTTTCCCTCATGAATCAGCTCGAAAAGGTTTCGGATTTACTGCTTTTTGTTAATCCAATATTTGTTCAAGTTTGTGGATCATATGGATGGTTTGGTACTGAATTTTGGAAAGCTGACAAACTGGAACTACTGCTTATTATGGGTTTTTGTTTGAAAATTTGGTATATTATCTTACTGGAATAGTGGCAGCATGTTACCTAGAATCAGGGCCGATCGAAGCTACTTGGGGATTGGGAAAATATTTTGTTTTAGGCTGTCTTTCTAATCAAGTACTATGTGAATTTTATTTTTCATTATCTGATCATTTTTGAATTGATGTACATCTTTTTTCGATTTTACTTTTCAAAATTTTATCAATTCTATTAGGGTTACATCTAGTAACAAATTTATAGTAACAAATTTATTCGTTTGTATTCCTACATATCTAAATTGGATACAGAAATATAATTACAGACAAATAAAACGCAATGTATTTGGTATTTATCAACTGCAAACTGAGGGGAGATTTAAGATGGGGGGGAATTGGTGTATACTTATAGGAAGTTCACAGACTCTTTAAGATGTTGCAGATTTTGGAATGAGCCTTCAGTTTTAAGATTAATCTATCAAAATGTTATGTTGTTGTGTGGTTGCTTGAAGTTTAATCCTTTTAATATCTTCGGTTCTTCATGGGCTGAGAGTTATTGGCCTCTGTCCTCTACCTTAGTCTACCTACCGGTGGCAATCCTGAGTTGGTATATTTTTGGAATTGATTTGGGAGACGTGCGTTGTAGATTCTTATCCAAGACTGAACTGTAACTGTAAAAGAAGAAGAGAGATTAATGGTAAATTCACTATTTTCTGCCCTATAATATCAAATATAAGTAATGATAGAAAGTGCAAAACGTGATCGTTCCCGTTTGCATGGATATTTTCTTTTATTTGAAATTTCTTTAAAGCTCTAGGAATTGGAAAAAAATGTTTCATTTGTTCTCTCAAATATTCTGGTCTCTCACCTTTCCCTTCTTAGAATTCTAGCCAAATTTGCGCATTTCACTTTGAAGTAAATTAGATTGTTCTGGAGTTGCTTGTTTGAGCAGTTGATTTGGGGCCGATTTTTGGGCTCCTCTGTGGTTTCTCTTGTGCGTGATAGAAATTGTAGGTCCATGTTGGAGGAGGTTGTAATGGTCCCTCCCGGTAAGGATAAAGGGTTTTTATTCTATGCACACACACACACATATATATTTTGCAGTTTTGGAGCATATTTGGCTTGAAGACATAGTAGGATCTTTAGAGGTTGAACGGTCATGGAACGTTCTTTGAAAAAATATTAGGTTTAATACCTCCTTGTGGACATTGGCCAGGATAGTGTTGCCCATTCCACAACCTCCATGTCTTGGAGGGTTCTTCGAATAAGCATCTCCCATGAACCATTTTGGTCAACCACAAATCTACAACTGATGCATTCTTTGCACTGGATAAAGCAAACAGAAAGGTAAAATGATAGATTTTTTTTTTTTTTGTCCAATCCATAGGTCAGCCCGACAATGTTTGAGTTGACAATACAACACTAGGTTTCTATAGCACATTCCTTTGCCCAGTCTAAACATAGATTATACATAACTTGGGCTATCCAAAGACTGACTCATAAACTCAGAAATGATAAATTCATGAGCCAAACATCCCCAAAGAAATTCTTCACCTAACATAGTGACTTTGGAGATTTAACATTGAAAAATGTGGCATTTGGAGTCTGGAGGATAGTTATTTTTGCAAAATTTGGCTCTACCAAGGGATTTTCATTGTTCATTGTTCATTTTTTTTTTTAAAATTTAATTTTATTTATTTATATACAATGGTGAACCAAACTTTCATGGAGAGATAAATGAAGGAAAACAAGGGCATACAAAAATATAGCCTTGAGAAAAGGAAGCAAATCTCACACACACACACACACACACACAAAAAAAAATCTCTAAGCTAGAGAGATAAGATCTAAAGGATAATTACTAAATAACTTTGGTTTGTAACTTCATAACCGAAGCTGAAAGAGAAAAATGGAATCTGAGAAGGTACCAAGCATCACTTGGAGGTCTCTCAATCTCTCTAAGGAAAACCTTTTTGGTCCCAGAGTTTGCAGGAATATTTGGTTCTTAGGTTTTAAAATGTACACTTCCAGTGTCTGAGTTTTGAAAAATAGGATTAAAAGGGGTATTTGGTGGTACTTTTTCCATCTACAAGTTTTTGAAATTCTTTTTAATGTAGTGTGGCATTTGAAATTTTTTTAAAAGATAAAACTCTCCTCTCTCTATTCTCATCCTCTCTCCAACCTCTCTCCAACCTCTCTCTTTCGTTCTTTTTCCTCTCTCCTTCCTCACTCTTTCATTCAAATTAGTGGCATTGTCTTTGTGACGCTACCTATATGATCAAGGGGTCAAGCTCGAAGTACAAGGTGGCGGTGGAGGGTTGCGGGAGTCAATGAGGGTGAGGATTCCTAGGTGACGAATGCTAGGTTATTCTTCTTTTTTGAGTTTGATCTAAATTGATGAATTTAGACTTAGCTGGGATTTGATATCATTGCAGCCCACAGAGTTTAAGGCTAATGGATCACAAAAAATCAAGGGAAAACATGAAAAGTCGATTGTGCGACAAAGGGATGGAATACTGTAGATTTTGGACATGAACTGTTGAGAAATAGAGTTGATCTTTGATGTGGAATAGACTCTGAGGGAGTTTAGCACTAGTGATCTCAAATCGTTGTCATTGATCTCGAGAAGTGGTAAAAAAATGGTTGGAAGGGACGGCTTCTCGTGGGGACCCCCTATTGTTAGGAGAAAGAATGGAAAGAGGGATAGGAGAAATAAAGGAGGGAGGGAGGATTAAGAGGAGAGAGAATGGAAAGAGAGAATGAGAGGAGAGAAATTATTTTATTTTTAATTTTAAATGCCACGCAAACAATAAAGATAATAAATAATTACTCCATTACCATTACTGTAGCAAATAGAAAAAGTATTGCTAGAGACCGTTTTAAACCTATTTATCAAAACTCACAGACTTCTTAAGCATATTCTTGAAAACTCAGATACCAAAATAGTACATTTTAAAAGGGCCAATGAATCTATTCCTGAAAACGCCAGGCAAAAGGTAATTTTCCAAAATTCTATTATTTCTCTTACCCCCCAAACCCCATAAAATTACACAAACCCGAACTCGCCATAAGTGCTCATCTCTCACGAAAGGGTTGGTGGAGAAAAAACTCATAGGTCGTCTCTCTACAACTTCGAGAACTGGCAAAGCAATAGCCAAACTCCTCAAAGAAACAACTCCAAATTGCTCCTTCAAAGTACCAACACCGAAGAATATGATTGAGATCTTCAATTGTTCTCTTCCAAACAATAGAACAAAAGGCTCTACCAAATTGGATACCTTACTTGAAATCCGATCCAATGTGTTAACTCTTCTATTGAAAATCTGACACATAAAGAATTCAATCTTCTTGGGAATTTTCACCTTCCACACAAAGAAAAAAAAAACGAAACTCTCGATGAGTGGTGACCAACCAAACATCGAAAGGAGGTGTAGAAAAAGTGCCTTTGGATGAGTTGGGACTTAAAGACAAACATTCTTCCTCTCATCGGTAAAGCGAAACTCTCCAATCAAAGATAAAAGAGCTAGAACATTCGAGGTTCAATGAAAGGGCAGAATCCAAATGAAAGAGAAAGAAATTCCTTAAGGAGGACAACGGGGAAACATGGAGCAGAGAGTTCTATCCACTGACCACGTATCCTCCCTAAAGTGAGTATCTCTCTCATCCCTTATTGAATAGTGAGTAAATTGAGAAAGAACATGGAGCTAAGTAGAAATATATTTCCACGACTTTTCAATATTTTGAACAGGTAATAATTTTTAGGTTTTGACGTTCGCTGGAAGGCAAGGTTCTATTTTTTAGCCTTGAAAGTTACGCCTTCATTGAACCATGGCCTTCACCTCATAGAAGATGGTTATGTCTCTATGAAAAGGCTCTAAGGCTTCCACCCCTCATGTAATGATTAGAAAAATGATATTAATTTGTTTCATTCTTCAAGAAATATAAAAGTTTAAGTTGTGACAATTTGAACTATTACTACTTTTACTGTGACTTTAAGAATATTGAATGACAAAAATGTATAGTATAAGTTGATTCTATTAATGATAATAGTAGTGATGTTAAAGATATCATTTAGAATTTTTGTTCAAGTGGCAATTGAGAGGGGTATTTTCTTTTTCTTCTTTTCTATTTTTATGTTATGTTAGTGGTACTTAGGCATGCCATTTTAGAATTTGTAAAATGTTTTCCAATAATTTTGAGGCTTACACTTCATACTGCCTTGAACTTATGCCTCTCCTCTTCGAGGGGAAAAGTCTCAAGGTTGCCTCTAACCTTTAAAACATTGTGGGTTTCAGAAATACCTTAAATCCCACCTATTGTCCGTTCAATTGTGTAAGGATCCTACTACTTACAATGACCTTGTGCTCTAAGGTGTCAAATTCATGATGGAACAGCCATAACCATGTAGCCAACAAGGCTGTGTTGCTTTCCCTTATGTTACTTATACCTGAGCAGCTAACCTTCCAAGGTTCAACCGCTTAGACCCCGCCTCCCACCTCACAAGATGAGATCCTTTCCATTCATCAATCTCCTCCCATAAGAAATATCTCATAAGCTTCTCAAAGACCTTACTAACTGCACTAAGAACTCTAACCAGGGACATAAAATAGATTGGGATGCCACTTAGGACCAACTGATTAGAATAAGCCAACCATTTTCGTGAAGAAACTTTTCTTCCAAGATTCAAGCCTTTTTCGAACTTTTTGATAGGACGATGTTGGTTGGCTTTGGCAATGCTACTACTTTCTTGCTTGATTATTGGATTGACAATGACATCCTTCCAAAAGACTACCCTGGGCTTTTCTCCCTACAATCTCAGAAAGAGATTGTCATCAGGAATCCCTTCTCTCACTATCACTATTCAAAATTTTCTTTTAGAAGGAACCACTCGGTTTTTAAGATTCTTGAATGGGCTTCTCTCCCAGTTTGCTCTCTAACTTCTTCTTTGGCTCTCTTCTGGATAATTGGACTTGGACTTGGACTTGGACTTGGACTTGGACTTGGACTTGGATGATGGAGATCTTTTCTTGTAACTCCCTATTGTTTGTCTTCATTAATAAAAAGAACGCCGAACCTACCCTATACACTAAGTTATTTGACAATCCAAACATCCCAAGAAAGTCGAGTTCTTTCTTTGGGAGCTTTCTCATGAGACTATTAATACTCATGATAAGCTTGCAAGGCCTCCAGACTATATGTCCCTTCTATCTCCTAAAATGTAAGAGAATAAAATGTAAGTTCTCTTAGTGCCATTTGGAAGAGCTGTGTTGTAATCTTCTTTGGCTTACGGCTTCATTTTCCTCCTGGTATATAATTTCATTTATACAATGAAATTACTCTCTCATTAAAGAAAAAAAAAAACATACGACCTTTGATTAGAACATGGAGAAATATGAACCCTGCTTGAGTTCATTCATCACATTTTTACCTCATTGGTAACTTTATGCCTTTGGTTGGTAATATGTGCTTACTAATCAATCCATCTATCGTTTTTCAGGATAAGAAGTCACTCAGCCTTGGGCCTGATGATAGTTTGCATCTAGAGGGGTTTGCATTGAGTGTCTTTGCAAAGGCAGACAAACAAGATCATGCTGGACGAGCGGATTTGTATGTCAATGAATCAATGATCTTCCTTCATATAGAAAAATATTTCAATTCCTGTACTTTTAGTTAGTTACAAAGATTCATGGTTAACTTGCTTGACTTGGAATATTGCTTTTAAAAACTATGTTTGAATTAGATTGGATGACTTTTAGTGGTCAATTTTATAAGTTATTGTTCACATCGGAATCATTATTCACAAAGAAAGCTACTTCGTTTATTCTAAAAAATACAAGTTATCTAGAAGAACAACTTCGTTTATTCTAAAAAATACAAGTTATCTAGAAGAACACACTAAAGAAAAGAAGAATATGGTTAAAAATGAAATAAAATGAAAATAAACTAAGAATAAGAATAAGGAAAAAAAAAATCAATTGTCGGAACATATTTTTACTTACAAAAATCAAGTCTTGTAGTTTCTTAATTCGAAGCAGCTAAGTTTGTTTTCAAATTGTATTGAAGTCTGTTTCAGTATGGTTGTTGATTGAGCTTAACCATCGTTCTTATTTGTCACTTCCTTTGATGGATATATAAGATAAGATGCATAGTTAGATCATAACTTGAAGTTTTATCTTTGTTGAAGTGTCAAAAGATGTCATTAATGTGATTTGGATACTTGTAGGCTGTATGGTTTCACTCATTTAAGTTATGGCATCCTTTTTTCATTATATTTGTGTGCTTCAAACATTATTTGAGTAAGGATAGAGAAATCATATATTTTGTTTCTGAGTTTCTAATTTCTTTAAGATTTTATTCACAGGAACACTGCAAAAACATTTTATGCTGCAAGCATTTTCTTCGAGATTATTTCCCAGTTTGGTCCACTTCAACCAGACGTGAGTTTCTTTCCTGATTGACATTGTTTTAGTCTTCTGAATCAGATCCTTGCTTAATCTTTTAAAAAAAATTCTATTCATAGCTGGAGCAAAAACGGAAATACGCCGTCTGGAAAGCAGCAGATATCAGGAAGGCTTTGAAAGAGGGAAGGAAGCCACAGCCTGGTCCACCTTCTGGTGATGAAGATCTGTCTGTTCCTTCAAGTACACCTACCAGTGCAAATGTATGGTTTGCTGCCTAATTCTAGTTTAACTCTTGTACTACCTACTAAAAATGTGAGATCTCACCTCGGTTGGGGAGGAAAACGAAACATCCTTTATAAGGGTGTGGAAACCTCTCCCTAGCCGACGCTTTTTAAAAACCTTGAAGAGAAGTCTAAAAGAGAAATCCCAAAAAGGACAATATCTGCTAATGGTGGGCTAGGGTCGTTACAAATGGTATCAGAGCTAGACACGGGGTAATGTGCCAGCGAGGAGCTGAGCCCCGAAGGGGGGTGGACATGAGGCGATGTGCCAGCAAGGATGCTGGGTCCCAAAGGGGGTGGATTTTGTGGGGGTCCCACATCGATTGGAGAAAGGAAGAGTGTCAGCGAGGACACTCGTCCCTAAAGGAGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACACCTTTTATAAGGGTGTGAAAACCTCTTCCTAGCAGAGACGCACTTTAAAAACTTTGAGAGGAAGTCCGAAAGGGAAAGTCCAAAGAAGACAATATCTTCTAGCGGTGGGCTAAGGTCGTTACAAATGGTATCAGAGCTAGACATCGGGCGATGTGCCAGCAAGGAAGCTAAGCCCCGAAGGGGGTGGACATGAGGTGATATGACAGCAAGGATGCGGGGCCCGAAAGGGGGTGGATTTGGTGGGGGTCCCACATCGATGGGAGAAAGGAACGAGTGCCAGCGAGGACGCTAGGCCTCGAAGAGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGAGAACGAAACACTTTATAAGGGTGTGGAAACCTATATCTAGCAGACGCGTTTTAAAAACCTTGAGGAGAAGTTCGAAAGGGAAAGCTCAAAGAGGACAATATCTGCTAGCGGTGGGCTAGGGTCGTTACAAAAACCTCTATTGATGCTTAATGTCTATGATTAATAAACAACAGACCACAAACAGATAGTAATATTATTTCTTAGCACACCAAAAGAAAGGAATATTATTTCTTAGTTTAGTTTTTCTCATTCTGGATTGTCCTTTATTAGTTTTACGCTGAAGTATCTTACATGTGTAAAACAACTATCAAGGAGGTTTTGAGGCTGCTTAGGTATTTACTACGATGTTCGTTTTTATAGGATGCAAGACCAGGGGAGCCTCAAGTCTCGAGAACTCGATCACAATTGGATTCCTTACCCCAGGTTTATGATAAGGTTAATGATGATCATTCAAATGTCCCACAAAGTCCTCAGGTCTATGACAACATGAACAACCACACTTCTTTAAACACGTCTCCGCCTGCTCGATTCCATAATGACGTTGACAATCAGCACCCTTCAAATATTCCATCATACCCTGCAGCTGGTTATCCATCCCATGAGTTTCATCTACCTCCTCCGAGGAATGAACCAGACAGTTCCTCTTACTCTCAGCCATACCACCACATCCAATCCTACTCAGAGCATCAACAGCCTTTGCCTCATAATTATGTATCTAATGAAACCTCCCCAAATTACTCATATTCCCATTTCCAATCTTATCCAAGTTTCTCGGAAACTAGCCTCCCGACCGCCCCTTCTCACCATCCGACCTATTACCAAGGATCCGATGCTTCATACTCTTCTCACGTGACTCCTCCTGCCAGCTACCCATCAGCTTCCCAATATCATTCAAACGGAAGAGAGGGGACGGCCTCAGAACCTCAACCTACAGCAGCTCCAGCCAAGTCATACCATTATGACAGCAACTACCAGCCACCTCCTGAGAAAATTGCTGAGGCACACAAGGCTGCGAGGTTTGCAGTAGGGGCTCTGGCATTTGATGATGTTTCAGTTGCAGTAGAACACTTGAAAAAATCACTGGAATTGTTGACTAACCCTTCAGCCGGTCTGTGATATTCTGCTTTTCTGCTCGACCCACTAATGTGTGGATTTCTTCTGCTATCATACCAGGTTTGATATGTAAATTTTAATACATTTGTGCCCGAGAAAATAGATTGATCGTAAATGTTATTGATAAAGTTTCATTATGTTTTTATAATTCCTTCCGAGGTATCTGTTACTCCTATAGTTGAAGCAATATTCATTTAAGAATGTCCAACTCTATGTTGGTGGTTGAATATGAGTTTAGATTGCATGAAG

mRNA sequence

TAAGTCATTTTGTTTTTTTGTTTAAGATTTGAAGTTTCCATTGCATTCGACTCTCCAAGTTTTCAACCAAAATTGTAAGATCACCTTTGATCGTCTCAGATTCGGAGCTCCCAGTGAAAGATGGCGAGCGAGACCGAGCCGGCGAAGCTCCTTCTGCCCTACCTCCAGCGAGCGGACGAATTGCAGAAGCACGAACCTCTTGTCGCATATTACTGTCGATTATATGCTATGGAACGTGGGCTAAGGATTCCACAGGGCGAACGTACCAAGACCACAAATGCCCTCCTTGTTTCCCTCATGAATCAGCTCGAAAAGGGGTCAAGCTCGAAGTACAAGGTGGCGGTGGAGGGTTGCGGGAGTCAATGAGGGATAAGAAGTCACTCAGCCTTGGGCCTGATGATAGTTTGCATCTAGAGGGGTTTGCATTGAGTGTCTTTGCAAAGGCAGACAAACAAGATCATGCTGGACGAGCGGATTTGAACACTGCAAAAACATTTTATGCTGCAAGCATTTTCTTCGAGATTATTTCCCAGTTTGGTCCACTTCAACCAGACCTGGAGCAAAAACGGAAATACGCCGTCTGGAAAGCAGCAGATATCAGGAAGGCTTTGAAAGAGGGAAGGAAGCCACAGCCTGGTCCACCTTCTGGTGATGAAGATCTGTCTGATGCAAGACCAGGGGAGCCTCAAGTCTCGAGAACTCGATCACAATTGGATTCCTTACCCCAGGTTTATGATAAGGTTAATGATGATCATTCAAATGTCCCACAAAGTCCTCAGGTCTATGACAACATGAACAACCACACTTCTTTAAACACGTCTCCGCCTGCTCGATTCCATAATGACGTTGACAATCAGCACCCTTCAAATATTCCATCATACCCTGCAGCTGGTTATCCATCCCATGAGTTTCATCTACCTCCTCCGAGGAATGAACCAGACAGTTCCTCTTACTCTCAGCCATACCACCACATCCAATCCTACTCAGAGCATCAACAGCCTTTGCCTCATAATTATGTATCTAATGAAACCTCCCCAAATTACTCATATTCCCATTTCCAATCTTATCCAAGTTTCTCGGAAACTAGCCTCCCGACCGCCCCTTCTCACCATCCGACCTATTACCAAGGATCCGATGCTTCATACTCTTCTCACGTGACTCCTCCTGCCAGCTACCCATCAGCTTCCCAATATCATTCAAACGGAAGAGAGGGGACGGCCTCAGAACCTCAACCTACAGCAGCTCCAGCCAAGTCATACCATTATGACAGCAACTACCAGCCACCTCCTGAGAAAATTGCTGAGGCACACAAGGCTGCGAGGTTTGCAGTAGGGGCTCTGGCATTTGATGATGTTTCAGTTGCAGTAGAACACTTGAAAAAATCACTGGAATTGTTGACTAACCCTTCAGCCGGTCTGTGATATTCTGCTTTTCTGCTCGACCCACTAATGTGTGGATTTCTTCTGCTATCATACCAGGTTTGATATGTAAATTTTAATACATTTGTGCCCGAGAAAATAGATTGATCGTAAATGTTATTGATAAAGTTTCATTATGTTTTTATAATTCCTTCCGAGGTATCTGTTACTCCTATAGTTGAAGCAATATTCATTTAAGAATGTCCAACTCTATGTTGGTGGTTGAATATGAGTTTAGATTGCATGAAG

Coding sequence (CDS)

ATGAGGGATAAGAAGTCACTCAGCCTTGGGCCTGATGATAGTTTGCATCTAGAGGGGTTTGCATTGAGTGTCTTTGCAAAGGCAGACAAACAAGATCATGCTGGACGAGCGGATTTGAACACTGCAAAAACATTTTATGCTGCAAGCATTTTCTTCGAGATTATTTCCCAGTTTGGTCCACTTCAACCAGACCTGGAGCAAAAACGGAAATACGCCGTCTGGAAAGCAGCAGATATCAGGAAGGCTTTGAAAGAGGGAAGGAAGCCACAGCCTGGTCCACCTTCTGGTGATGAAGATCTGTCTGATGCAAGACCAGGGGAGCCTCAAGTCTCGAGAACTCGATCACAATTGGATTCCTTACCCCAGGTTTATGATAAGGTTAATGATGATCATTCAAATGTCCCACAAAGTCCTCAGGTCTATGACAACATGAACAACCACACTTCTTTAAACACGTCTCCGCCTGCTCGATTCCATAATGACGTTGACAATCAGCACCCTTCAAATATTCCATCATACCCTGCAGCTGGTTATCCATCCCATGAGTTTCATCTACCTCCTCCGAGGAATGAACCAGACAGTTCCTCTTACTCTCAGCCATACCACCACATCCAATCCTACTCAGAGCATCAACAGCCTTTGCCTCATAATTATGTATCTAATGAAACCTCCCCAAATTACTCATATTCCCATTTCCAATCTTATCCAAGTTTCTCGGAAACTAGCCTCCCGACCGCCCCTTCTCACCATCCGACCTATTACCAAGGATCCGATGCTTCATACTCTTCTCACGTGACTCCTCCTGCCAGCTACCCATCAGCTTCCCAATATCATTCAAACGGAAGAGAGGGGACGGCCTCAGAACCTCAACCTACAGCAGCTCCAGCCAAGTCATACCATTATGACAGCAACTACCAGCCACCTCCTGAGAAAATTGCTGAGGCACACAAGGCTGCGAGGTTTGCAGTAGGGGCTCTGGCATTTGATGATGTTTCAGTTGCAGTAGAACACTTGAAAAAATCACTGGAATTGTTGACTAACCCTTCAGCCGGTCTGTGA

Protein sequence

MRDKKSLSLGPDDSLHLEGFALSVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPLQPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLSDARPGEPQVSRTRSQLDSLPQVYDKVNDDHSNVPQSPQVYDNMNNHTSLNTSPPARFHNDVDNQHPSNIPSYPAAGYPSHEFHLPPPRNEPDSSSYSQPYHHIQSYSEHQQPLPHNYVSNETSPNYSYSHFQSYPSFSETSLPTAPSHHPTYYQGSDASYSSHVTPPASYPSASQYHSNGREGTASEPQPTAAPAKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSVAVEHLKKSLELLTNPSAGL

Homology

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BLAST of Cp4.1LG14g07390 vs. Swiss-Prot
Match: LIP5_ARATH (Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 OS=Arabidopsis thaliana GN=LIP5 PE=1 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 3.6e-87
Identity = 201/364 (55.22%), Postives = 241/364 (66.21%), Query Frame = 1


Query: 2   RDKKSLSLGPDDSLHLEGFALSVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPL 61
           +DKKSL+L PDD++H+EGFALSVFAKADKQD AGRADL TAKTFYAASIFFEI+SQFGP+
Sbjct: 65  KDKKSLTLSPDDNMHVEGFALSVFAKADKQDRAGRADLGTAKTFYAASIFFEILSQFGPV 124

Query: 62  QPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDE-DLSDARPGEPQVSRTRSQLDSL 121
            PD+EQK KYA WKAADIRKA+KEGRKP PG P  D+ DLS    G P  S   S  D+ 
Sbjct: 125 PPDIEQKHKYAAWKAADIRKAIKEGRKPTPGDPVDDDTDLSIPSSG-PSGSYDHSASDTN 184

Query: 122 PQVYDKVNDD---HSNVPQSPQVYDNMNNHTSLNTSPPARFHNDVDNQHPSNIPSYPAAG 181
              + +   D    SN   S   +  +  H       P RF+++  N +P+++P  P + 
Sbjct: 185 TTSHHRTELDPPHDSNDDSSHHQFPEVPQHPL-----PPRFYDNPTNDYPADVPPPPPSS 244

Query: 182 YPSHEFHLPPPRNEPDSSSYSQPYHHIQSYSEH---QQPLPHNYVSNETSPNYSYSHFQS 241
           YPS++ HLPPP   P  S Y  PY H Q Y +      P P NY S+E SPN S  +FQS
Sbjct: 245 YPSND-HLPPPTG-PSDSPYPHPYSH-QPYHQDPPKHMPPPQNYSSHEPSPN-SLPNFQS 304

Query: 242 YPSFSETSLPTAPSHHPTYYQGSDASYSSHVTPPA-------SYPSASQYHSNGREGTAS 301
           YPSFSE+SLP+   H+P++YQ  +  YSS  + PA       S P    Y SNGR   A 
Sbjct: 305 YPSFSESSLPSTSPHYPSHYQNPEPYYSSPHSAPAPSSTSFSSAPPPPPYSSNGRINIAP 364

Query: 302 EPQPTAAPAKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSVAVEHLKKSLELLTN 352
              P  + A+ YHYDS+YQP PEK+AEA KAARFAVGALAFD+VS AVEHLKKSLELLTN
Sbjct: 365 VLDPAPSSAQKYHYDSSYQPGPEKVAEALKAARFAVGALAFDEVSTAVEHLKKSLELLTN 418

[Close]

BLAST of Cp4.1LG14g07390 vs. Swiss-Prot
Match: VTA1_DICDI (Vacuolar protein sorting-associated protein VTA1 homolog OS=Dictyostelium discoideum GN=vta1 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.4e-14
Identity = 78/313 (24.92%), Postives = 150/313 (47.92%), Query Frame = 1


Query: 12  DDSLHLEGFALSVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPLQPDLEQKRKY 71
           D++ ++E FA+  F+ AD QD AG+A+  T+ TFY+A +FF ++   G +  +++ K+KY
Sbjct: 82  DEAKYVEAFAMKAFSFADTQDRAGKANKATSTTFYSAFLFFNVLEHMGEVSEEVKLKKKY 141

Query: 72  AVWKAADIRKALKEGRKPQPGPPSGDEDLSDARPGE----PQVSRTRSQLDSLPQVYDKV 131
           A W++ DI  A+K G  P P PPS D++      GE     Q+ +   +L+       + 
Sbjct: 142 ASWRSVDINTAIKNGVAPSP-PPSIDQNEEGGASGETEEDAQLKQLEMELNLAKATLQQD 201

Query: 132 NDDHSNVPQSP-----QVYDNMNNHTSLNTSPPARFHNDVDNQHPSNIPSYPAAGYPSHE 191
           N++++N+  S       V + M++  S  + P    +N+ +N    + PS+P+       
Sbjct: 202 NNNNNNMSSSTIITTNSVSEGMSSSLSFPSFPSIPNNNNNNNNTTPSFPSFPS------- 261

Query: 192 FHLPPPRNEPDSSSYSQP-YHHIQSYSEHQQPLPHNYVSNETSPNYSYSHFQSYPSFSET 251
              P P N  ++S+ ++P +    S+     P P    +++++P        S+P F  T
Sbjct: 262 --FPSPTNSDNNSNNNKPAFPSFPSF-----PSPPTTTNSDSAP--------SFPKFPST 321

Query: 252 SLPTAPSHHPTYYQGSDASYSSHVTPPASYPSASQYHSNGREGTASEPQPTAAPAKSYHY 311
             PT  S +         S+ S   P  + P+ S  ++N  +  +    P +   K   +
Sbjct: 322 PSPTNSSSN----NSQQPSFPSF--PSFTSPTNSNNNNNNSQQPSFPTFPNSTNQKRQVF 365

Query: 312 DSNYQPPPEKIAE 315
           +S+ +   E++ +
Sbjct: 382 ESDEEEEQEEVED 365

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BLAST of Cp4.1LG14g07390 vs. Swiss-Prot
Match: VTA1_BOVIN (Vacuolar protein sorting-associated protein VTA1 homolog OS=Bos taurus GN=VTA1 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 7.0e-14
Identity = 49/124 (39.52%), Postives = 63/124 (50.81%), Query Frame = 1


Query: 14  SLHLEGFALSVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPLQPDLEQKRKYAV 73
           S HLE +AL +F  AD +D AGR   N  K+FY AS+  ++I+ FG L  +  + RKYA 
Sbjct: 87  SAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDENVKHRKYAR 146

Query: 74  WKAADIRKALKEGRKPQPGPPSGDEDLSDARPGEPQVSRTRSQLDSLPQVYDKVNDDHSN 133
           WKA  I   LK G  PQ GP   +ED  D    E       + L + P        D SN
Sbjct: 147 WKATYIHNCLKNGETPQAGPVGIEEDNVDV---EEYEDAGATSLPTQPLQPSSSTYDPSN 206

Query: 134 VPQS 138
           +P S
Sbjct: 207 MPSS 207

[Close]

BLAST of Cp4.1LG14g07390 vs. Swiss-Prot
Match: VTA1_PONAB (Vacuolar protein sorting-associated protein VTA1 homolog OS=Pongo abelii GN=VTA1 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 8.5e-12
Identity = 53/145 (36.55%), Postives = 68/145 (46.90%), Query Frame = 1


Query: 16  HLEGFALSVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPLQPDLEQKRKYAVWK 75
           HLE +AL +F  AD +D AGR   N  K+FY AS+  ++I+ FG L  +  + RKYA WK
Sbjct: 89  HLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDENVKHRKYARWK 148

Query: 76  AADIRKALKEGRKPQPGPPSGDEDLSDARPGEPQVSRTRSQLDSLPQVYDKVNDDHSNVP 135
           A  I   LK G  PQ GP   +ED +D    E       +   SLP             P
Sbjct: 149 ATYIHNCLKNGETPQAGPVGIEED-NDVEENED------AGAASLP--------TQPTQP 208

Query: 136 QSPQVYDNMN----NHTSLNTSPPA 157
            S   YD  N    N+T +   P A
Sbjct: 209 SSSSTYDPSNMPSGNYTGIQIPPGA 218

[Close]

BLAST of Cp4.1LG14g07390 vs. Swiss-Prot
Match: VTA1_HUMAN (Vacuolar protein sorting-associated protein VTA1 homolog OS=Homo sapiens GN=VTA1 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.1e-11
Identity = 53/145 (36.55%), Postives = 68/145 (46.90%), Query Frame = 1


Query: 16  HLEGFALSVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPLQPDLEQKRKYAVWK 75
           HLE +AL +F  AD +D AGR   N  K+FY AS+  ++I+ FG L  +  + RKYA WK
Sbjct: 89  HLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDENVKHRKYARWK 148

Query: 76  AADIRKALKEGRKPQPGPPSGDEDLSDARPGEPQVSRTRSQLDSLPQVYDKVNDDHSNVP 135
           A  I   LK G  PQ GP   +ED +D    E       +   SLP             P
Sbjct: 149 ATYIHNCLKNGETPQAGPVGIEED-NDIEENED------AGAASLP--------TQPTQP 208

Query: 136 QSPQVYDNMN----NHTSLNTSPPA 157
            S   YD  N    N+T +   P A
Sbjct: 209 SSSSTYDPSNMPSGNYTGIQIPPGA 218

[Close]

BLAST of Cp4.1LG14g07390 vs. TrEMBL
Match: A0A0A0L4Z2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G073810 PE=4 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 3.1e-170
Identity = 315/364 (86.54%), Postives = 332/364 (91.21%), Query Frame = 1


Query: 2   RDKKSLSLGPDDSLHLEGFALSVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPL 61
           +DKKSL+LGPDDSLHLEGFAL+VFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPL
Sbjct: 65  KDKKSLNLGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPL 124

Query: 62  QPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLS----------DARPGEPQVS 121
           QPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGD+DLS          D RPGEPQVS
Sbjct: 125 QPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDDDLSVPSSTPTSANDVRPGEPQVS 184

Query: 122 RTRSQLDSLPQVYDKVNDDHSNVPQSPQVYDNMNNHTSLNTSPPARFHNDVDNQHPSNIP 181
           RT+SQ D  P+VYDK N+DH+N+P SPQVYDNMNNH    TSPPARFHN+VDNQHP NIP
Sbjct: 185 RTQSQSDLSPRVYDKENNDHTNIPPSPQVYDNMNNH----TSPPARFHNEVDNQHPPNIP 244

Query: 182 SYPAAGYPSHEFHLPPPRNEPDSSSYSQPYHHIQSYS-EHQQ-PLPHNYVSNETSPNYSY 241
           SYPAAGYPSHEFH+PPPRNE D+SSY+QPYHHIQSYS EHQQ PLPHNY SNETSPNYSY
Sbjct: 245 SYPAAGYPSHEFHIPPPRNEQDNSSYTQPYHHIQSYSQEHQQPPLPHNYPSNETSPNYSY 304

Query: 242 SHFQSYPSFSETSLPTAPSHHPTYYQGSDASYSSHVT-PPASYPSASQYHSNGREGTASE 301
            HFQSYPSFSE+SLP APSH+PTYYQGSDASYSS VT PPASYPSASQYHSNGRE TASE
Sbjct: 305 PHFQSYPSFSESSLPAAPSHYPTYYQGSDASYSSQVTPPPASYPSASQYHSNGREETASE 364

Query: 302 PQPTAAPAKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSVAVEHLKKSLELLTNP 353
           PQPT+APAKSYHYDSNYQP PEKIAEAHKAARFAVGALAFDDVSVAVEHLKKSLELLTNP
Sbjct: 365 PQPTSAPAKSYHYDSNYQPAPEKIAEAHKAARFAVGALAFDDVSVAVEHLKKSLELLTNP 424

[Close]

BLAST of Cp4.1LG14g07390 vs. TrEMBL
Match: B9SYY3_RICCO (Protein C6orf55, putative OS=Ricinus communis GN=RCOM_0546870 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 3.0e-112
Identity = 232/366 (63.39%), Postives = 284/366 (77.60%), Query Frame = 1


Query: 2   RDKKSLSLGPDDSLHLEGFALSVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPL 61
           +DKK+L LGP+D+LH+EGFAL+VFAKADKQD AGRADLNTAKTFYAASIFFEI++QFG L
Sbjct: 62  KDKKTLKLGPEDNLHVEGFALNVFAKADKQDRAGRADLNTAKTFYAASIFFEILNQFGDL 121

Query: 62  QPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLS--DARPG--------EPQVS 121
           Q DLEQK++YAVWKAADIRKALKEGRKP PGPP+GDEDLS   + PG        E   +
Sbjct: 122 QLDLEQKQRYAVWKAADIRKALKEGRKPNPGPPAGDEDLSIPSSAPGNGYDLGTTETVAT 181

Query: 122 RTRSQLDSLPQVYDKVNDDHS-NVPQSPQVYDNMNNHTSLNTSPPARFHNDVDNQHPSNI 181
             R + D     +D+ ND HS ++  S Q ++ +NN  S + +   +FH+ VDN HP+NI
Sbjct: 182 SPRQESDQNSHFHDQFNDHHSTSIQPSVQFHETVNNQHSAHMASQPQFHDSVDNHHPANI 241

Query: 182 ----PSYPAAGYPSHEFHLPPPRNEPDSSSYSQPYHHIQSYS-EHQQPLPHNYVSNETSP 241
               PSY +AGYP H+FH PPP +  + S YSQPYHH QSYS E QQP+  NY S+E +P
Sbjct: 242 PPSHPSYTSAGYPPHDFHPPPPASGSEDSPYSQPYHH-QSYSQEPQQPVLRNYPSHE-AP 301

Query: 242 NYSYSHFQSYPSFSETSLPTAPSHHPTYYQGSDASYSSHVTPPASYPSASQYHSNGREGT 301
           +YSY +FQSYPSF+E+SLP+ PSH P YYQGSD+SY+   + P++YPS +QY S  R GT
Sbjct: 302 SYSYPNFQSYPSFTESSLPSVPSHIP-YYQGSDSSYAPQ-SAPSNYPSTAQYTSGSRNGT 361

Query: 302 ASEPQPTAAPAKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSVAVEHLKKSLELL 352
           +S+P PT  PA++Y YDSNYQPPPEKIAEAHKAARFAVGALAFDDVSVAV++L+KSLELL
Sbjct: 362 SSDPAPT--PAQTYQYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSVAVDYLRKSLELL 421

[Close]

BLAST of Cp4.1LG14g07390 vs. TrEMBL
Match: M5VJ09_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005900mg PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 1.1e-111
Identity = 230/375 (61.33%), Postives = 266/375 (70.93%), Query Frame = 1


Query: 2   RDKKSLSLGPDDSLHLEGFALSVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPL 61
           +DKKSL LGP+D+L+LEGFAL+VF KADKQD AGRADLNTAKTFYAASIFFEII+QFG L
Sbjct: 65  KDKKSLQLGPEDNLYLEGFALNVFGKADKQDRAGRADLNTAKTFYAASIFFEIINQFGVL 124

Query: 62  QPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLS----------DARPGEPQVS 121
           QPDLEQK+KYA WKAADIRKALKEGRKP+ GPP+GD+DLS          D  P E  V 
Sbjct: 125 QPDLEQKQKYAAWKAADIRKALKEGRKPEAGPPAGDDDLSIPSSGMSGSYDLGPSEAAVI 184

Query: 122 RTRSQLDSLPQVYDKVNDDHSNVPQSPQVYDNMNNHTSLNTSPPARFHNDVDNQHPSN-- 181
                 D  PQ YD+VN  HS     PQ +DN     S++     +FH++V+ QH SN  
Sbjct: 185 SPGPPSDPSPQFYDEVNKQHSTDTLPPQFHDNAKIQRSVSLQSSPKFHDEVNGQHSSNNA 244

Query: 182 --IPSYPAAGYPSHEFHLPPPRNEPDSSSYSQPYHHIQSYSEHQQPLPHNYVSNETSPNY 241
               SYP AGY SH+FH PPP N P++S YSQPY       E QQ LPHNY S+E   N+
Sbjct: 245 PPPQSYPTAGYSSHDFHPPPPTNRPETSDYSQPYQQQPYPHEPQQHLPHNYPSHEN--NF 304

Query: 242 SYSHFQSYPSFSETSLPTAPSHHPTYYQGSDASYSSHVTP-----------PASYPSASQ 301
           SY +FQSYPSF+E+++P   SH+P+YYQGSD SYS+   P           P S PS +Q
Sbjct: 305 SYPNFQSYPSFTESNIPAVTSHYPSYYQGSDPSYSAQSAPSFSPQSAPSFSPQSAPSPAQ 364

Query: 302 YHSNGREGTASEPQPTAAPAKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSVAVE 352
           Y S+ R GT  EP PT  PAK+Y YDS+YQP PEKIAEAHKAARFAVGALAFDDVSVAV+
Sbjct: 365 YLSSNRNGTVPEPAPTPTPAKTYQYDSSYQPSPEKIAEAHKAARFAVGALAFDDVSVAVD 424

[Close]

BLAST of Cp4.1LG14g07390 vs. TrEMBL
Match: A0A067L565_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00956 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 6.2e-110
Identity = 228/366 (62.30%), Postives = 279/366 (76.23%), Query Frame = 1


Query: 2   RDKKSLSLGPDDSLHLEGFALSVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPL 61
           +DKKSL LGP+D+LH+EGFALSVFAKADKQD AGRADLNTAKTFYAASIFFEI++QFG L
Sbjct: 65  KDKKSLKLGPEDNLHVEGFALSVFAKADKQDRAGRADLNTAKTFYAASIFFEILNQFGAL 124

Query: 62  QPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLS----------DARPGEPQVS 121
           Q DLEQK+KYAVWKAADIRKALKEGRKP PGPP+ DED S          D  P E  V+
Sbjct: 125 QSDLEQKQKYAVWKAADIRKALKEGRKPNPGPPADDEDFSIPSSTPGGGYDLGPSETAVT 184

Query: 122 RTRSQLDSLPQVYDKVNDDHS-NVPQSPQVYDNMNNHTSLNTSPPARFHNDVDNQHPSNI 181
               + D L + YD+VND +S ++P S Q  +N   H S   S P +FH+  +N H +NI
Sbjct: 185 SPHPESDQLSRFYDQVNDQNSTSIPPSSQKANNQ--HFSHLASQP-QFHDSANNHHSTNI 244

Query: 182 ----PSYPAAGYPSHEFHLPPPRNEPDSSSYSQPYHHIQSYSEH-QQPLPHNYVSNETSP 241
               PSYP+AGYPSH+FH PPP +  ++++Y+ PYH  QSYS+  QQ +P N+ S+E  P
Sbjct: 245 MPSPPSYPSAGYPSHDFHPPPPASRSENAAYAPPYHQ-QSYSQDPQQQVPPNHPSHEL-P 304

Query: 242 NYSYSHFQSYPSFSETSLPTAPSHHPTYYQGSDASYSSHVTPPASYPSASQYHSNGREGT 301
           +YSY +FQSYP F+E+SLP+ PSH+P+YYQGSD+SY+     P++Y S  QY S+ R G+
Sbjct: 305 SYSYPNFQSYPGFTESSLPSVPSHYPSYYQGSDSSYAPQSASPSNYSSTMQYTSSSRNGS 364

Query: 302 ASEPQPTAAPAKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSVAVEHLKKSLELL 352
            S+P P  A +++Y YDSNYQPPPEKIAEAHKAARFAVGALAFDDVSVAV++LKKSLELL
Sbjct: 365 DSDPVP--ASSQTYQYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSVAVDYLKKSLELL 423

[Close]

BLAST of Cp4.1LG14g07390 vs. TrEMBL
Match: A0A067F7M4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013480mg PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 4.0e-109
Identity = 229/384 (59.64%), Postives = 271/384 (70.57%), Query Frame = 1


Query: 2   RDKKSLSLGPDDSLHLEGFALSVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPL 61
           +DKKSL LGP+DSLHLEGFAL+VFAKADKQD AGRADLNTAKTFYAASIFFEI++QFG L
Sbjct: 65  KDKKSLKLGPEDSLHLEGFALNVFAKADKQDRAGRADLNTAKTFYAASIFFEILNQFGAL 124

Query: 62  QPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLS----------DARPGEPQVS 121
           QPDLE+K+KYA WKAADIRKA+KEGRKP PGPP G EDLS          D    E  + 
Sbjct: 125 QPDLEEKQKYAAWKAADIRKAMKEGRKPVPGPPGGGEDLSIPPSTPAVSYDIGTSETPIK 184

Query: 122 RTRSQLDSLPQVYDKVNDDHSNVPQSPQVYDNMNNHTSLNTSPPARFHNDVDNQHPSNIP 181
              S  D   Q  D+++   +NV   P  + +  +H S N SPP +FH+ V NQH S+IP
Sbjct: 185 GPGSDSDPSSQFPDRLDHYSANV-SPPSPFPDRLDHYSANVSPPPQFHDKVSNQHSSDIP 244

Query: 182 ---------------------SYPAAGYPSHEFHLPPPRNEPDSSSYSQPYHHIQSYSEH 241
                                S+P++GYP+H+FH PPP N  ++S+YSQPYHH Q   E 
Sbjct: 245 PPPPTHDFHPTSLNRSDSSSYSHPSSGYPTHDFHPPPPANRSENSTYSQPYHH-QYSQEP 304

Query: 242 QQPLPHNYVSNETSPNYSYSHFQSYPSFSETSLPTAPSHHPTYYQGSDASYSSH---VTP 301
           QQ LPHNY S E +P Y+Y +FQSYPSF+E+S+P+ PSH+P+YYQGSD  YS       P
Sbjct: 305 QQHLPHNYPSQE-NPTYNYPNFQSYPSFTESSIPSIPSHYPSYYQGSDIPYSPQSAVPAP 364

Query: 302 PASYPSASQYHSNGREGTASEPQPTAAPAKSYHYDSNYQPPPEKIAEAHKAARFAVGALA 352
            ASY   S+Y S+ R GT SEP     PA+ Y YDSNYQPPPEKI+EAHKAARFAVGALA
Sbjct: 365 TASYQLTSEYSSSSRNGTISEP----PPAQKYQYDSNYQPPPEKISEAHKAARFAVGALA 424

[Close]

BLAST of Cp4.1LG14g07390 vs. TAIR10
Match: AT4G26750.1 (AT4G26750.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 323.2 bits (827), Expect = 2.0e-88
Identity = 201/364 (55.22%), Postives = 241/364 (66.21%), Query Frame = 1


Query: 2   RDKKSLSLGPDDSLHLEGFALSVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPL 61
           +DKKSL+L PDD++H+EGFALSVFAKADKQD AGRADL TAKTFYAASIFFEI+SQFGP+
Sbjct: 65  KDKKSLTLSPDDNMHVEGFALSVFAKADKQDRAGRADLGTAKTFYAASIFFEILSQFGPV 124

Query: 62  QPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDE-DLSDARPGEPQVSRTRSQLDSL 121
            PD+EQK KYA WKAADIRKA+KEGRKP PG P  D+ DLS    G P  S   S  D+ 
Sbjct: 125 PPDIEQKHKYAAWKAADIRKAIKEGRKPTPGDPVDDDTDLSIPSSG-PSGSYDHSASDTN 184

Query: 122 PQVYDKVNDD---HSNVPQSPQVYDNMNNHTSLNTSPPARFHNDVDNQHPSNIPSYPAAG 181
              + +   D    SN   S   +  +  H       P RF+++  N +P+++P  P + 
Sbjct: 185 TTSHHRTELDPPHDSNDDSSHHQFPEVPQHPL-----PPRFYDNPTNDYPADVPPPPPSS 244

Query: 182 YPSHEFHLPPPRNEPDSSSYSQPYHHIQSYSEH---QQPLPHNYVSNETSPNYSYSHFQS 241
           YPS++ HLPPP   P  S Y  PY H Q Y +      P P NY S+E SPN S  +FQS
Sbjct: 245 YPSND-HLPPPTG-PSDSPYPHPYSH-QPYHQDPPKHMPPPQNYSSHEPSPN-SLPNFQS 304

Query: 242 YPSFSETSLPTAPSHHPTYYQGSDASYSSHVTPPA-------SYPSASQYHSNGREGTAS 301
           YPSFSE+SLP+   H+P++YQ  +  YSS  + PA       S P    Y SNGR   A 
Sbjct: 305 YPSFSESSLPSTSPHYPSHYQNPEPYYSSPHSAPAPSSTSFSSAPPPPPYSSNGRINIAP 364

Query: 302 EPQPTAAPAKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSVAVEHLKKSLELLTN 352
              P  + A+ YHYDS+YQP PEK+AEA KAARFAVGALAFD+VS AVEHLKKSLELLTN
Sbjct: 365 VLDPAPSSAQKYHYDSSYQPGPEKVAEALKAARFAVGALAFDEVSTAVEHLKKSLELLTN 418

[Close]

BLAST of Cp4.1LG14g07390 vs. NCBI nr
Match: gi|659096495|ref|XP_008449127.1| (PREDICTED: vacuolar protein sorting-associated protein VTA1 homolog [Cucumis melo])

HSP 1 Score: 619.0 bits (1595), Expect = 5.1e-174
Identity = 318/364 (87.36%), Postives = 334/364 (91.76%), Query Frame = 1


Query: 2   RDKKSLSLGPDDSLHLEGFALSVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPL 61
           +DKKSL+LGPDDSLHLEGFAL+VFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPL
Sbjct: 65  KDKKSLNLGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPL 124

Query: 62  QPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLS----------DARPGEPQVS 121
           QPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGD+DLS          DARPGEPQVS
Sbjct: 125 QPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDDDLSVPSSTPANANDARPGEPQVS 184

Query: 122 RTRSQLDSLPQVYDKVNDDHSNVPQSPQVYDNMNNHTSLNTSPPARFHNDVDNQHPSNIP 181
           RT+SQ D  PQVYDK N+DH+N+PQSPQVYDNMNNHTSLNTSPPARFHN+VDNQHP NIP
Sbjct: 185 RTQSQSDLSPQVYDKANNDHTNMPQSPQVYDNMNNHTSLNTSPPARFHNEVDNQHPPNIP 244

Query: 182 SYPAAGYPSHEFHLPPPRNEPDSSSYSQPYHHIQSYSE--HQQPLPHNYVSNETSPNYSY 241
           SYPAAGYPSHEFH+PPPRNE D+SSY+QPYHHI SYS+   QQPLPHNY SNETSPNYSY
Sbjct: 245 SYPAAGYPSHEFHIPPPRNEQDNSSYTQPYHHIHSYSQEHQQQPLPHNYPSNETSPNYSY 304

Query: 242 SHFQSYPSFSETSLPTAPSHHPTYYQGSDASYSSHVT-PPASYPSASQYHSNGREGTASE 301
            HFQSYPSFSE+SLP APSH+PTYYQGSDASYSS VT PPASYPSASQYHSNGRE  ASE
Sbjct: 305 PHFQSYPSFSESSLPAAPSHYPTYYQGSDASYSSQVTPPPASYPSASQYHSNGREEMASE 364

Query: 302 PQPTAAPAKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSVAVEHLKKSLELLTNP 353
           PQPT APAKSYHYDSNYQP PEKIAEAHKAARFAVGALAFDDVSVAVEHLKKSLELLTNP
Sbjct: 365 PQPTQAPAKSYHYDSNYQPAPEKIAEAHKAARFAVGALAFDDVSVAVEHLKKSLELLTNP 424

[Close]

BLAST of Cp4.1LG14g07390 vs. NCBI nr
Match: gi|449463230|ref|XP_004149337.1| (PREDICTED: protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 [Cucumis sativus])

HSP 1 Score: 605.9 bits (1561), Expect = 4.5e-170
Identity = 315/364 (86.54%), Postives = 332/364 (91.21%), Query Frame = 1


Query: 2   RDKKSLSLGPDDSLHLEGFALSVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPL 61
           +DKKSL+LGPDDSLHLEGFAL+VFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPL
Sbjct: 65  KDKKSLNLGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPL 124

Query: 62  QPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLS----------DARPGEPQVS 121
           QPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGD+DLS          D RPGEPQVS
Sbjct: 125 QPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDDDLSVPSSTPTSANDVRPGEPQVS 184

Query: 122 RTRSQLDSLPQVYDKVNDDHSNVPQSPQVYDNMNNHTSLNTSPPARFHNDVDNQHPSNIP 181
           RT+SQ D  P+VYDK N+DH+N+P SPQVYDNMNNH    TSPPARFHN+VDNQHP NIP
Sbjct: 185 RTQSQSDLSPRVYDKENNDHTNIPPSPQVYDNMNNH----TSPPARFHNEVDNQHPPNIP 244

Query: 182 SYPAAGYPSHEFHLPPPRNEPDSSSYSQPYHHIQSYS-EHQQ-PLPHNYVSNETSPNYSY 241
           SYPAAGYPSHEFH+PPPRNE D+SSY+QPYHHIQSYS EHQQ PLPHNY SNETSPNYSY
Sbjct: 245 SYPAAGYPSHEFHIPPPRNEQDNSSYTQPYHHIQSYSQEHQQPPLPHNYPSNETSPNYSY 304

Query: 242 SHFQSYPSFSETSLPTAPSHHPTYYQGSDASYSSHVT-PPASYPSASQYHSNGREGTASE 301
            HFQSYPSFSE+SLP APSH+PTYYQGSDASYSS VT PPASYPSASQYHSNGRE TASE
Sbjct: 305 PHFQSYPSFSESSLPAAPSHYPTYYQGSDASYSSQVTPPPASYPSASQYHSNGREETASE 364

Query: 302 PQPTAAPAKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSVAVEHLKKSLELLTNP 353
           PQPT+APAKSYHYDSNYQP PEKIAEAHKAARFAVGALAFDDVSVAVEHLKKSLELLTNP
Sbjct: 365 PQPTSAPAKSYHYDSNYQPAPEKIAEAHKAARFAVGALAFDDVSVAVEHLKKSLELLTNP 424

[Close]

BLAST of Cp4.1LG14g07390 vs. NCBI nr
Match: gi|743938724|ref|XP_011013801.1| (PREDICTED: vacuolar protein sorting-associated protein VTA1 homolog [Populus euphratica])

HSP 1 Score: 434.5 bits (1116), Expect = 1.8e-118
Identity = 235/365 (64.38%), Postives = 281/365 (76.99%), Query Frame = 1


Query: 2   RDKKSLSLGPDDSLHLEGFALSVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPL 61
           +DKKSL+LGP+D+L+LEGFAL+VF KADKQD AGRADLNTAKTFYAASIFFEII+QFGPL
Sbjct: 65  KDKKSLNLGPEDNLYLEGFALNVFGKADKQDRAGRADLNTAKTFYAASIFFEIITQFGPL 124

Query: 62  QPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLS----------DARPGEPQVS 121
           QPDLEQK+KYAVWKAADIRKALKEGRKP PGPP+ DE+LS          D  P E   S
Sbjct: 125 QPDLEQKQKYAVWKAADIRKALKEGRKPNPGPPADDENLSIPSSTPSGGYDLGPSESAAS 184

Query: 122 RTRSQLDSLPQVYDKVNDD-HSNVPQSPQVYDNMNNHTSLNTSPPARFHNDVDNQHPSNI 181
             R + D  PQ +D+VND+ ++N+P SP  +DN+NNH S    PP+ F+N   NQH ++ 
Sbjct: 185 NARPESDPSPQFHDQVNDEPYTNIPPSPMFHDNLNNHHSAQVPPPSLFYNSASNQHLTDT 244

Query: 182 PS---YPAAGYPSHEFHLPPPRNEPDSSSYSQPYHHIQSYSEHQQPLPHNYVSNETSPNY 241
           P    YPAAGYPSH+FH PPP +  ++S+Y+QPYHH  +  E Q  LP NY S+ETSP Y
Sbjct: 245 PPSSFYPAAGYPSHDFHPPPPASRSENSAYAQPYHHKSNSQEPQPHLPQNYQSHETSP-Y 304

Query: 242 SYSHFQSYPSFSETSLPTAPSHHPTYYQGSDASYSSHVTPP-ASYPSASQYHSNGREGTA 301
           SY +FQSYPSFSE+SLP+ PSHHP+YYQGSD+S+S    PP +SY S  QY S+    T 
Sbjct: 305 SYPNFQSYPSFSESSLPSVPSHHPSYYQGSDSSHSPQPAPPTSSYLSTPQYPSSSIMRTD 364

Query: 302 SEPQPTAAPAKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSVAVEHLKKSLELLT 352
           S+P  T+  AK+Y YD+NY PPPEKI EAHKAARFAVGALAFDDVSVAV++L+KSLELLT
Sbjct: 365 SDPASTS--AKAYQYDNNYHPPPEKIVEAHKAARFAVGALAFDDVSVAVDYLRKSLELLT 424

[Close]

BLAST of Cp4.1LG14g07390 vs. NCBI nr
Match: gi|1009165863|ref|XP_015901272.1| (PREDICTED: protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5-like isoform X2 [Ziziphus jujuba])

HSP 1 Score: 420.2 bits (1079), Expect = 3.5e-114
Identity = 230/382 (60.21%), Postives = 271/382 (70.94%), Query Frame = 1


Query: 2   RDKKSLSLGPDDSLHLEGFALSVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPL 61
           +DKKSL LGP+D+L++EGFAL+VF KADKQDHAGRADLNTAKTFYAASIFFEI++QFG L
Sbjct: 65  KDKKSLKLGPEDNLYVEGFALNVFGKADKQDHAGRADLNTAKTFYAASIFFEILNQFGVL 124

Query: 62  QPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLS----------DARPGEPQVS 121
           QPDLEQK+KYA WKAADIRKALKEGRKP  GPPSGD DLS          D  P EP  +
Sbjct: 125 QPDLEQKQKYAAWKAADIRKALKEGRKPIAGPPSGDNDLSVPSSTASGAHDVGPSEPTFN 184

Query: 122 RTRSQLDSLPQVYDKVNDDHSNVPQSPQVYDNMNNHTSLNTSPPARFHNDVDNQH----- 181
            +  +    P   DKVN+ +S   + P  +D +NN  S N  PP ++H+ V++QH     
Sbjct: 185 NSMPESGLSPYSSDKVNNQNSTSIEPPSFHDEVNNQHSTNIPPPFQYHDKVNDQHSAHTP 244

Query: 182 -----------------PSNIPSYPAAGYPSHEFHLPPPRNEPDSSSYSQPYHHIQSYSE 241
                            P  +PSYP AGYPSH+FH PPP N  DS  YSQPYHH     E
Sbjct: 245 PTQQFHDEVSNHHATNLPPTLPSYPTAGYPSHDFHPPPPANRSDSFDYSQPYHHQSYPQE 304

Query: 242 HQQPLPHNYVSNETSPNYSYSHFQSYPSFSETSLPTAPSHHPTYYQGSDASYSSHVTPP- 301
            QQ LPHNY  +E + +YSY+HFQSYP F E+SLP  PSH+P+Y+QG DASYS    PP 
Sbjct: 305 PQQHLPHNYPPHEAN-SYSYTHFQSYPGFQESSLPAVPSHYPSYFQGPDASYSPQSAPPT 364

Query: 302 ASYPSASQYHSNGREGTASEPQPTAAPAKSYHYDSNYQPPPEKIAEAHKAARFAVGALAF 351
           A YPS +Q+ S+ + G  +EP P  +PAK+Y YDSNYQPPPEKIAEAHKAARFAVGALAF
Sbjct: 365 ADYPSTTQFQSSSKNGKVTEPVP--SPAKTYEYDSNYQPPPEKIAEAHKAARFAVGALAF 424

[Close]

BLAST of Cp4.1LG14g07390 vs. NCBI nr
Match: gi|224116398|ref|XP_002317288.1| (hydroxyproline-rich glycoprotein [Populus trichocarpa])

HSP 1 Score: 417.9 bits (1073), Expect = 1.7e-113
Identity = 230/368 (62.50%), Postives = 280/368 (76.09%), Query Frame = 1


Query: 2   RDKKSLSLGPDDSLHLEGFALSVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQFGPL 61
           +DKKSL+LGP+D+L+LEGFAL+VF KADKQD AGRADLNTAKTFYAASIFFEII+QFG L
Sbjct: 65  KDKKSLNLGPEDNLYLEGFALNVFGKADKQDRAGRADLNTAKTFYAASIFFEIITQFGAL 124

Query: 62  QPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDL-------------SDARPGEP 121
           QPDLEQK+KYAVWKAADIRKALKEGRKP PGPP+ DE+L             S+ARP E 
Sbjct: 125 QPDLEQKQKYAVWKAADIRKALKEGRKPNPGPPADDENLSIPSSTPSGGYVPSNARP-ES 184

Query: 122 QVSRTRSQLDSLPQVYDKVNDD-HSNVPQSPQVYDNMNNHTSLNTSPPARFHNDVDNQHP 181
             S  R + D  PQ +D+VND+ ++N+P SP  +D +NNH S +  PP+ F++   NQH 
Sbjct: 185 AASNARPESDPSPQFHDQVNDEPYTNIPPSPLFHDKVNNHHSAHVPPPSLFYDSASNQHS 244

Query: 182 SNIPS---YPAAGYPSHEFHLPPPRNEPDSSSYSQPYHHIQSYSEHQQPLPHNYVSNETS 241
           ++ P    YPAAGYPS +FH PPP +  ++S+Y+QPYHH  +  E Q  LP NY S+E S
Sbjct: 245 TDTPPPSFYPAAGYPSQDFHPPPPASRSENSAYAQPYHHQSNSQEPQPHLPQNYQSHEPS 304

Query: 242 PNYSYSHFQSYPSFSETSLPTAPSHHPTYYQGSDASYSSHVTPP-ASYPSASQYHSNGRE 301
            +YSY +FQSYPSFSE+SLP+ PSHHP+YYQGSD+S++    PP +SY S  QY S+   
Sbjct: 305 -SYSYPNFQSYPSFSESSLPSVPSHHPSYYQGSDSSHTPQPAPPTSSYSSTPQYASSSIM 364

Query: 302 GTASEPQPTAAPAKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSVAVEHLKKSLE 352
            T S+P  T+  AK+Y YD NYQPPPEKI EAHKAARFAVGALAFDDVSVAV++L+KSLE
Sbjct: 365 RTTSDPASTS--AKTYQYDINYQPPPEKIVEAHKAARFAVGALAFDDVSVAVDYLRKSLE 424

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g07390 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LIP5_ARATH	3.6e-87	55.22	Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 OS=Arabidopsis thaliana ...	[more]
VTA1_DICDI	1.4e-14	24.92	Vacuolar protein sorting-associated protein VTA1 homolog OS=Dictyostelium discoi...	[more]
VTA1_BOVIN	7.0e-14	39.52	Vacuolar protein sorting-associated protein VTA1 homolog OS=Bos taurus GN=VTA1 P...	[more]
VTA1_PONAB	8.5e-12	36.55	Vacuolar protein sorting-associated protein VTA1 homolog OS=Pongo abelii GN=VTA1...	[more]
VTA1_HUMAN	1.1e-11	36.55	Vacuolar protein sorting-associated protein VTA1 homolog OS=Homo sapiens GN=VTA1...	[more]

BLAST of Cp4.1LG14g07390 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4Z2_CUCSA	3.1e-170	86.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G073810 PE=4 SV=1	[more]
B9SYY3_RICCO	3.0e-112	63.39	Protein C6orf55, putative OS=Ricinus communis GN=RCOM_0546870 PE=4 SV=1	[more]
M5VJ09_PRUPE	1.1e-111	61.33	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005900mg PE=4 SV=1	[more]
A0A067L565_JATCU	6.2e-110	62.30	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00956 PE=4 SV=1	[more]
A0A067F7M4_CITSI	4.0e-109	59.64	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013480mg PE=4 SV=1	[more]

BLAST of Cp4.1LG14g07390 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G26750.1	2.0e-88	55.22	hydroxyproline-rich glycoprotein family protein	[more]

BLAST of Cp4.1LG14g07390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659096495\|ref\|XP_008449127.1\|	5.1e-174	87.36	PREDICTED: vacuolar protein sorting-associated protein VTA1 homolog [Cucumis mel...	[more]
gi\|449463230\|ref\|XP_004149337.1\|	4.5e-170	86.54	PREDICTED: protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 [Cucumis sati...	[more]
gi\|743938724\|ref\|XP_011013801.1\|	1.8e-118	64.38	PREDICTED: vacuolar protein sorting-associated protein VTA1 homolog [Populus eup...	[more]
gi\|1009165863\|ref\|XP_015901272.1\|	3.5e-114	60.21	PREDICTED: protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5-like isoform ...	[more]
gi\|224116398\|ref\|XP_002317288.1\|	1.7e-113	62.50	hydroxyproline-rich glycoprotein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023175	VPS_Vta1/CALS_N

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0098542	defense response to other organism
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0044424	intracellular part
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g07390.1	Cp4.1LG14g07390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023175	Vacuolar protein sorting-associate protein Vta1/Callose synthase, N-terminal domain	GENE3D	G3DSA:1.25.40.270		coord: 13..85 score: 1.6
None	No IPR available	GENE3D	G3DSA:1.20.5.420		coord: 303..347 score: 3.3
None	No IPR available	PANTHER	PTHR12741	LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1	coord: 2..96 score: 8.9E-68coord: 209..236 score: 8.9E-68coord: 298..351 score: 8.9E-68coord: 124..192 score: 8.9
None	No IPR available	PFAM	PF04652	Vta1	coord: 14..85 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG14g07390	Cucsa.042680	Cucumber (Gy14) v1	cgycpeB0026
Cp4.1LG14g07390	CmaCh16G009140	Cucurbita maxima (Rimu)	cmacpeB345
Cp4.1LG14g07390	CmoCh16G009490	Cucurbita moschata (Rifu)	cmocpeB308
Cp4.1LG14g07390	CmoCh06G008900	Cucurbita moschata (Rifu)	cmocpeB772
Cp4.1LG14g07390	Cla005348	Watermelon (97103) v1	cpewmB212
Cp4.1LG14g07390	Csa3G073810	Cucumber (Chinese Long) v2	cpecuB213
Cp4.1LG14g07390	MELO3C014172	Melon (DHL92) v3.5.1	cpemeB185
Cp4.1LG14g07390	ClCG10G005050	Watermelon (Charleston Gray)	cpewcgB194
Cp4.1LG14g07390	CSPI03G04740	Wild cucumber (PI 183967)	cpecpiB216
Cp4.1LG14g07390	Lsi05G005610	Bottle gourd (USVL1VR-Ls)	cpelsiB179
Cp4.1LG14g07390	MELO3C014172.2	Melon (DHL92) v3.6.1	cpemedB232
Cp4.1LG14g07390	CsaV3_3G004730	Cucumber (Chinese Long) v3	cpecucB0256
Cp4.1LG14g07390	Bhi11G000434	Wax gourd	cpewgoB0276
Cp4.1LG14g07390	CsGy3G004810	Cucumber (Gy14) v2	cgybcpeB326
Cp4.1LG14g07390	Carg26940	Silver-seed gourd	carcpeB0977
Cp4.1LG14g07390	Carg25351	Silver-seed gourd	carcpeB0683

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG14g07390	Cp4.1LG00g02030	Cucurbita pepo (Zucchini)	cpecpeB005

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG14g07390	Cucurbita pepo (Zucchini)	cpecpeB240
Cp4.1LG14g07390	Cucurbita maxima (Rimu)	cmacpeB469
Cp4.1LG14g07390	Cucurbita maxima (Rimu)	cmacpeB818