Cp4.1LG14g07210 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG14g07210
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDUF4408 domain protein
LocationCp4.1LG14 : 5058297 .. 5058779 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAGGTTCAAGAAGTCCGAAATTGTTCTACTTTTGGGCCTCACCGCGCTTCTTCTAATCACTCCTCTTCTTTCCTCATCCCTTAGACCCACATATCTCTACTTCATCTTCAACCTTCTCATCCTTGCTCTCGCTCTACAAGCTGGCCTTCTCTCCTCTGCCTTCCCAAATAATGCTCACAGCCCCAACACCACCCCTTCCCCCGACACCTCCGCCAACATCCCAAATTCCGACAACATTCCCCCTCCCAATCCCAAAATGGAATCTCTGAACAAGTGTCCCTCTGCTTCCACCATTTTCTTCATCGGAGACGGCGACAGTGAGGAGGCGGAAGAGGAGCCTTCTGGCGGCGCCGCTGGAAATGGGCAAGAGTTGTTTGCCCAAGCTGAGACGTTTATTGGGAATTTCTATAAGCAGTTGGAGATGCAGAAAGAGGAGTCTTGGAAGAATGTTCATGGTTTCTATCGTAAACCCTTTTGA

mRNA sequence

ATGAACAGGTTCAAGAAGTCCGAAATTGTTCTACTTTTGGGCCTCACCGCGCTTCTTCTAATCACTCCTCTTCTTTCCTCATCCCTTAGACCCACATATCTCTACTTCATCTTCAACCTTCTCATCCTTGCTCTCGCTCTACAAGCTGGCCTTCTCTCCTCTGCCTTCCCAAATAATGCTCACAGCCCCAACACCACCCCTTCCCCCGACACCTCCGCCAACATCCCAAATTCCGACAACATTCCCCCTCCCAATCCCAAAATGGAATCTCTGAACAAGTGTCCCTCTGCTTCCACCATTTTCTTCATCGGAGACGGCGACAGTGAGGAGGCGGAAGAGGAGCCTTCTGGCGGCGCCGCTGGAAATGGGCAAGAGTTGTTTGCCCAAGCTGAGACGTTTATTGGGAATTTCTATAAGCAGTTGGAGATGCAGAAAGAGGAGTCTTGGAAGAATGTTCATGGTTTCTATCGTAAACCCTTTTGA

Coding sequence (CDS)

ATGAACAGGTTCAAGAAGTCCGAAATTGTTCTACTTTTGGGCCTCACCGCGCTTCTTCTAATCACTCCTCTTCTTTCCTCATCCCTTAGACCCACATATCTCTACTTCATCTTCAACCTTCTCATCCTTGCTCTCGCTCTACAAGCTGGCCTTCTCTCCTCTGCCTTCCCAAATAATGCTCACAGCCCCAACACCACCCCTTCCCCCGACACCTCCGCCAACATCCCAAATTCCGACAACATTCCCCCTCCCAATCCCAAAATGGAATCTCTGAACAAGTGTCCCTCTGCTTCCACCATTTTCTTCATCGGAGACGGCGACAGTGAGGAGGCGGAAGAGGAGCCTTCTGGCGGCGCCGCTGGAAATGGGCAAGAGTTGTTTGCCCAAGCTGAGACGTTTATTGGGAATTTCTATAAGCAGTTGGAGATGCAGAAAGAGGAGTCTTGGAAGAATGTTCATGGTTTCTATCGTAAACCCTTTTGA

Protein sequence

MNRFKKSEIVLLLGLTALLLITPLLSSSLRPTYLYFIFNLLILALALQAGLLSSAFPNNAHSPNTTPSPDTSANIPNSDNIPPPNPKMESLNKCPSASTIFFIGDGDSEEAEEEPSGGAAGNGQELFAQAETFIGNFYKQLEMQKEESWKNVHGFYRKPF
BLAST of Cp4.1LG14g07210 vs. TrEMBL
Match: A0A0A0L509_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G074480 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 5.0e-43
Identity = 113/187 (60.43%), Postives = 132/187 (70.59%), Query Frame = 1

Query: 1   MNRFKKSEIVLLLGLTALLLITPLLSSSLRPTYLYFIFNLLILALALQAGLLSSAFPNNA 60
           MN+FKKSEIV+LL LT LL+ITPLLSSSLRPTYLYFIFNLLI+AL +QAGLL+   P++ 
Sbjct: 2   MNKFKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQ 61

Query: 61  HSPN--TTPSPDTSANI--------------PNSDNIPPPNPKMESLNKCPSASTIFFIG 120
              N  +  SP+T A+                +SD I   N KMESL KCPSAS+IF+IG
Sbjct: 62  DKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISSGNVKMESLKKCPSASSIFYIG 121

Query: 121 DGDS---------EEAEEE--PSGGAAGNGQELFAQAETFIGNFYKQLEMQKEESWKNVH 161
           +GDS         E+ EEE    GG   NGQELFAQAETFIGNFYKQL+MQKEESWKN+H
Sbjct: 122 EGDSEAEETTGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIH 181

BLAST of Cp4.1LG14g07210 vs. TrEMBL
Match: B9STZ2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0752610 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 8.3e-30
Identity = 92/199 (46.23%), Postives = 120/199 (60.30%), Query Frame = 1

Query: 1   MNRFKKSEIVLLLGLTALLLITPLLSSSLRPTYLYFIFNLLILALALQAGLLSSAFP--- 60
           M++FKKS++++L  L ALL +TPLLSSS+RP YLYFI NLLI+AL  +AGLLS+AF    
Sbjct: 1   MSKFKKSQVLMLTLLAALLFVTPLLSSSIRPKYLYFIINLLIVALGAEAGLLSAAFSKPI 60

Query: 61  -----------NNAHSPNTTPSPD-------------TSANIPNSDNIPPPNPKMESLNK 120
                      + A   + + SP+              S  I  S +I     K+E + K
Sbjct: 61  LDHDRKHPVPVSTAQDHHQSSSPEQAKVSKTRVVEKSASEKIVRSSSI----TKVEKVKK 120

Query: 121 CPSASTIFFIGDGDS------------EEAEEEPSGGAAGNGQELFAQAETFIGNFYKQL 161
           CPS  ++FFIG G++            EEAEEE   G   +GQELF +AETFIGNFYKQL
Sbjct: 121 CPSMPSLFFIGSGETEVVDQDVVQEHEEEAEEEEVEGI--SGQELFTKAETFIGNFYKQL 180

BLAST of Cp4.1LG14g07210 vs. TrEMBL
Match: B9I151_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s08730g PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.7e-28
Identity = 90/203 (44.33%), Postives = 115/203 (56.65%), Query Frame = 1

Query: 1   MNRFKKSEIVLLLGLTALLLITPLLSSSLRPTYLYFIFNLLILALALQAGLLSSAF---- 60
           M++ K+S+I++L  L ALL +TPL+SSSLRP YLYFI NLLI+AL ++AGL+S+AF    
Sbjct: 1   MSKLKRSQILMLSILAALLFVTPLISSSLRPKYLYFIMNLLIIALGVEAGLISAAFSKPV 60

Query: 61  ------------PNNAHSPNTTPSPDTSANIPNSDNIPPPNPKM---------------- 120
                          A S  T P     A+  +  N  P   K+                
Sbjct: 61  EQYKKHAVVPLTTKPARSFVTAPPDQYQASTTDQANEAPAKAKVLEKSSSENIVSTVVKV 120

Query: 121 -ESLNKCPSASTIFFIGDGD---------SEEAEEEPSGGAAG-NGQELFAQAETFIGNF 161
              + KCPS  ++FFIG GD         +EE EEE  G   G +GQELF +AETFIGNF
Sbjct: 121 DHKVKKCPSLPSLFFIGGGDHGTKAVEDVTEEHEEEAEGEVGGISGQELFTKAETFIGNF 180

BLAST of Cp4.1LG14g07210 vs. TrEMBL
Match: U7E225_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0040s00200g PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.5e-28
Identity = 91/203 (44.83%), Postives = 117/203 (57.64%), Query Frame = 1

Query: 1   MNRFKKSEIVLLLGLTALLLITPLLSSSLRPTYLYFIFNLLILALALQAGLLSSAF---- 60
           M++ K+S+I++L  L ALL +TPL+SSSLRP YLYFI NLLI+AL ++AGL+S+AF    
Sbjct: 1   MSKLKRSQILMLSILAALLFVTPLISSSLRPKYLYFIMNLLIIALGVEAGLISAAFSKPV 60

Query: 61  ---PNNAHSPNTT---------PSPDTSANIPNSDNIPPPNPKM---------------- 120
                +A  P TT         P     A+  +  N  P   K+                
Sbjct: 61  EQYKKHAVVPLTTKPARSFVMAPPDQYQASTTDQANEAPAKAKVLEKSSSENIVSTVVKV 120

Query: 121 -ESLNKCPSASTIFFIGDGD---------SEEAEEEPSGGAAG-NGQELFAQAETFIGNF 161
              + KCPS  ++FFIG GD         +EE EEE  G   G +GQELF +AETFIGNF
Sbjct: 121 DHKVKKCPSLPSLFFIGGGDHGTKAVEDVTEEHEEEAEGEVGGISGQELFTKAETFIGNF 180

BLAST of Cp4.1LG14g07210 vs. TrEMBL
Match: A0A061F5W7_THECC (LIM and calponin domains-containing protein 1, putative OS=Theobroma cacao GN=TCM_030822 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 7.8e-28
Identity = 88/191 (46.07%), Postives = 118/191 (61.78%), Query Frame = 1

Query: 1   MNRFKKSEIVLLLGLTALLLITPLLSSSLRPTYLYFIFNLLILALALQAGLLSSAFPNNA 60
           MN+FKKS++++L  + ALL + PLLSSSLRPTYLYF+ NLLI+AL  +AGLLS  F   A
Sbjct: 1   MNKFKKSQVLILSLVAALLFMAPLLSSSLRPTYLYFVLNLLIIALGAEAGLLS-VFSRPA 60

Query: 61  H-SPNTTPSPDTSANIPNSDN---IPPPNP-------------------KMESLNKCPSA 120
           + +     + +T A   + D+   + P N                    K++ + KCPS 
Sbjct: 61  YVAAKPVTAQETKAVESSKDDQKLVAPANNEEKAKVVEKSASEKIVGTVKVDKVKKCPST 120

Query: 121 STIFFIGDGDSE--------EAEEEPSGGAAGNGQELFAQAETFIGNFYKQLEMQKEESW 161
            ++FFIG G++E        E EEE  GG +G   ELFA+AE FIGNFYKQL+MQ+EESW
Sbjct: 121 PSLFFIGSGEAESEAVDEEHEEEEEEVGGLSG--PELFAKAEIFIGNFYKQLKMQREESW 180

BLAST of Cp4.1LG14g07210 vs. NCBI nr
Match: gi|659096527|ref|XP_008449145.1| (PREDICTED: uncharacterized protein LOC103491095 [Cucumis melo])

HSP 1 Score: 184.1 bits (466), Expect = 1.9e-43
Identity = 112/185 (60.54%), Postives = 131/185 (70.81%), Query Frame = 1

Query: 1   MNRFKKSEIVLLLGLTALLLITPLLSSSLRPTYLYFIFNLLILALALQAGLLSSAFPNNA 60
           MN+FKKSEI++LLGLT LL+ITPLLSSSLRPTYLYFIFNLLI+AL +QAGLL+   P++ 
Sbjct: 2   MNKFKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQ 61

Query: 61  HSPN--TTPSPDTSANI--------------PNSDNIPPPNPKMESLNKCPSASTIFFIG 120
              N  +  SP+T A+                +SD I   N KMESL KCPSAS+IF+IG
Sbjct: 62  DKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISSGNVKMESLKKCPSASSIFYIG 121

Query: 121 DGDSEE---------AEEEPSGGAAGNGQELFAQAETFIGNFYKQLEMQKEESWKNVHGF 161
           +GDSE           EE   GG   NGQELFAQAETFIGNFYKQL+MQKEESWKN+HGF
Sbjct: 122 EGDSEAEETTGIEDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGF 181

BLAST of Cp4.1LG14g07210 vs. NCBI nr
Match: gi|778676040|ref|XP_011650520.1| (PREDICTED: uncharacterized protein LOC105434790 [Cucumis sativus])

HSP 1 Score: 182.2 bits (461), Expect = 7.2e-43
Identity = 113/187 (60.43%), Postives = 132/187 (70.59%), Query Frame = 1

Query: 1   MNRFKKSEIVLLLGLTALLLITPLLSSSLRPTYLYFIFNLLILALALQAGLLSSAFPNNA 60
           MN+FKKSEIV+LL LT LL+ITPLLSSSLRPTYLYFIFNLLI+AL +QAGLL+   P++ 
Sbjct: 2   MNKFKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQ 61

Query: 61  HSPN--TTPSPDTSANI--------------PNSDNIPPPNPKMESLNKCPSASTIFFIG 120
              N  +  SP+T A+                +SD I   N KMESL KCPSAS+IF+IG
Sbjct: 62  DKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISSGNVKMESLKKCPSASSIFYIG 121

Query: 121 DGDS---------EEAEEE--PSGGAAGNGQELFAQAETFIGNFYKQLEMQKEESWKNVH 161
           +GDS         E+ EEE    GG   NGQELFAQAETFIGNFYKQL+MQKEESWKN+H
Sbjct: 122 EGDSEAEETTGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIH 181

BLAST of Cp4.1LG14g07210 vs. NCBI nr
Match: gi|255577155|ref|XP_002529461.1| (PREDICTED: uncharacterized protein LOC8287620 [Ricinus communis])

HSP 1 Score: 138.3 bits (347), Expect = 1.2e-29
Identity = 92/199 (46.23%), Postives = 120/199 (60.30%), Query Frame = 1

Query: 1   MNRFKKSEIVLLLGLTALLLITPLLSSSLRPTYLYFIFNLLILALALQAGLLSSAFP--- 60
           M++FKKS++++L  L ALL +TPLLSSS+RP YLYFI NLLI+AL  +AGLLS+AF    
Sbjct: 1   MSKFKKSQVLMLTLLAALLFVTPLLSSSIRPKYLYFIINLLIVALGAEAGLLSAAFSKPI 60

Query: 61  -----------NNAHSPNTTPSPD-------------TSANIPNSDNIPPPNPKMESLNK 120
                      + A   + + SP+              S  I  S +I     K+E + K
Sbjct: 61  LDHDRKHPVPVSTAQDHHQSSSPEQAKVSKTRVVEKSASEKIVRSSSI----TKVEKVKK 120

Query: 121 CPSASTIFFIGDGDS------------EEAEEEPSGGAAGNGQELFAQAETFIGNFYKQL 161
           CPS  ++FFIG G++            EEAEEE   G   +GQELF +AETFIGNFYKQL
Sbjct: 121 CPSMPSLFFIGSGETEVVDQDVVQEHEEEAEEEEVEGI--SGQELFTKAETFIGNFYKQL 180

BLAST of Cp4.1LG14g07210 vs. NCBI nr
Match: gi|743932744|ref|XP_011010667.1| (PREDICTED: uncharacterized protein LOC105115473 [Populus euphratica])

HSP 1 Score: 134.4 bits (337), Expect = 1.7e-28
Identity = 92/202 (45.54%), Postives = 117/202 (57.92%), Query Frame = 1

Query: 1   MNRFKKSEIVLLLGLTALLLITPLLSSSLRPTYLYFIFNLLILALALQAGLLSSAFPN-- 60
           M++ K+S+I++L  L ALL +TPL+SSSLRP YLYFI NLLI+AL  +AGL+S+AF    
Sbjct: 1   MSKLKRSQILMLSILAALLFVTPLISSSLRPKYLYFIINLLIIALGAEAGLISAAFSEPV 60

Query: 61  -----NAHSPNTTPS--------PDTSANIPNSDNIPPPNPKM----------------- 120
                +A  P TT          PD  A+  +  N  P   K+                 
Sbjct: 61  EESKRHAVVPLTTKPARSFVTAPPDHQASTNDQANEAPAKAKVLEKSASENIVSTVVKVD 120

Query: 121 ESLNKCPSASTIFFIGDGD---------SEEAEEEPSGGAAG-NGQELFAQAETFIGNFY 161
             + KCPS  ++FFIG GD         +EE EEE  G   G +GQELF +AETFIGNFY
Sbjct: 121 HKVKKCPSLPSLFFIGGGDHGTKAVEDVTEEHEEEEEGEVGGISGQELFTKAETFIGNFY 180

BLAST of Cp4.1LG14g07210 vs. NCBI nr
Match: gi|224116538|ref|XP_002317326.1| (hypothetical protein POPTR_0011s08730g [Populus trichocarpa])

HSP 1 Score: 133.3 bits (334), Expect = 3.9e-28
Identity = 90/203 (44.33%), Postives = 115/203 (56.65%), Query Frame = 1

Query: 1   MNRFKKSEIVLLLGLTALLLITPLLSSSLRPTYLYFIFNLLILALALQAGLLSSAF---- 60
           M++ K+S+I++L  L ALL +TPL+SSSLRP YLYFI NLLI+AL ++AGL+S+AF    
Sbjct: 1   MSKLKRSQILMLSILAALLFVTPLISSSLRPKYLYFIMNLLIIALGVEAGLISAAFSKPV 60

Query: 61  ------------PNNAHSPNTTPSPDTSANIPNSDNIPPPNPKM---------------- 120
                          A S  T P     A+  +  N  P   K+                
Sbjct: 61  EQYKKHAVVPLTTKPARSFVTAPPDQYQASTTDQANEAPAKAKVLEKSSSENIVSTVVKV 120

Query: 121 -ESLNKCPSASTIFFIGDGD---------SEEAEEEPSGGAAG-NGQELFAQAETFIGNF 161
              + KCPS  ++FFIG GD         +EE EEE  G   G +GQELF +AETFIGNF
Sbjct: 121 DHKVKKCPSLPSLFFIGGGDHGTKAVEDVTEEHEEEAEGEVGGISGQELFTKAETFIGNF 180

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L509_CUCSA5.0e-4360.43Uncharacterized protein OS=Cucumis sativus GN=Csa_3G074480 PE=4 SV=1[more]
B9STZ2_RICCO8.3e-3046.23Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0752610 PE=4 SV=1[more]
B9I151_POPTR2.7e-2844.33Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s08730g PE=4 SV=1[more]
U7E225_POPTR3.5e-2844.83Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0040s00200g PE=4 SV=1[more]
A0A061F5W7_THECC7.8e-2846.07LIM and calponin domains-containing protein 1, putative OS=Theobroma cacao GN=TC... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|659096527|ref|XP_008449145.1|1.9e-4360.54PREDICTED: uncharacterized protein LOC103491095 [Cucumis melo][more]
gi|778676040|ref|XP_011650520.1|7.2e-4360.43PREDICTED: uncharacterized protein LOC105434790 [Cucumis sativus][more]
gi|255577155|ref|XP_002529461.1|1.2e-2946.23PREDICTED: uncharacterized protein LOC8287620 [Ricinus communis][more]
gi|743932744|ref|XP_011010667.1|1.7e-2845.54PREDICTED: uncharacterized protein LOC105115473 [Populus euphratica][more]
gi|224116538|ref|XP_002317326.1|3.9e-2844.33hypothetical protein POPTR_0011s08730g [Populus trichocarpa][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008480DUF761_pln
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g07210.1Cp4.1LG14g07210.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 124..153
score: 1.
NoneNo IPR availablePANTHERPTHR36887FAMILY NOT NAMEDcoord: 1..160
score: 5.7
NoneNo IPR availablePANTHERPTHR36887:SF1SUBFAMILY NOT NAMEDcoord: 1..160
score: 5.7