Cp4.1LG14g06870 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG14g06870
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionATP-dependent clp protease ATP-binding subunit clpx
LocationCp4.1LG14 : 204288 .. 209814 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGATATTCTTGAAGGCTCGAAGTCACAATTTCAGTCAGCTGCATAATTTTCTGTGAGGTTCTGCCGTCTACAATACTACCTCTGTTTCTTCATCCTCTTCAATCCTCTTCCTATTTCCGGTGCCAATTCCAAATCTTTCACATCCCCACCTCTATTAACTTCCAATTTTCTTACTCCCCTGATTCAGTTTGCATCTTCCAGTCCTCCATGAGCCAATAAATTTAGCTGCTTTCTCTTCCCTTTCATTTCCCGATATACATATTACTCACTCATGGCCGCCGCCGCTCTCAGGTCCAGGTCTTCCAAGGAAGTTTCCAGTTTCACGGTTTCTCGCTCTAGACACTCTATATCCAATTATATTCACGCTGCTTCCAATCCCAATTCCCACTGCACGAGCCGTAAAAAGTCGAACGACCTCTATCTCAACTCACCTTACCACTTGGTCTCTTTCAAGCCGGTTTCACTCGGAGGCGATTTTATTCAGAACAGAAGTCAACCATCCGATCATCGGAGGATTTACCGCAATTATAACAAGAACTTGTATGAGAAGTTGGGCAGGGGGGGTTGTTTTATGAGCACTTATGGGGACCCGCCGGAGGTTTGGTCTGGAGATGGGATTGTGATTCGTGGGAGCAATCCAAACTTGAATGGTCGTGGAGGCGGCGGTGGCAGCTCCAACTCTGGTTCTGGTGGTGAGTTCGGCTCGAACTCGAATGATGGGTGTTGGGGTGGTTCTAGTTTGGGACCTAATTTCCCAACCCCGAAGGAAATCTCCAAGGGGCTTGATAAATTTGTAATTGGTCAGGAGAGGGCTAAAAAGGTAAAACTCGTTTGTGGCTGGACATTGTCGATTCATTCAGCTACACTCATTTTGTTGTCTGAAGAAAGTGTTCCTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTAATCTTGTGCAGGTGCTCTCTGTGGGTGTTTACAATCACTACAAGCGCATCTATCATGAATCGCTACAAAGGTTGTGAATTTGAATGTTAGATACTTCCTGTCTATGATATTTTTCCTTTGACTTCAGTATATCCGAGTTAGTAAGGAGTGCCCTTGGGAGGTCAATGGTTTTGGTTAGAAGTTAAAACTCACAACCAACGTCTCTATTGTCCTAGTTTTCTTCATTGATTGCCATAATTTGGTGGCTAACATAGTTGTTGAACTCTAAAGGTAACCTCTCCAAACATACACAGAGACACACGTATCCTGATGCTTGTACTTGGAGCATGGCATTTTACTAGTCTAAAACCTGCAGAGCCTAGTTTAACCAGTCTGGTTTGCTGGTATTAATAAAAGAAAGGATACACTGATTTGGACGGTCACATTGGGAAATGGGGAACTGGGGAACTGGCAACTTTGAGCTCAATGTCAAGTTGGGAATCCAGTCTAGCATAATTCTTCTAGACGATGTGCTGTCTCTCTCTTTTTGAGCGTTTGTCTTGCATCTATCTTTTGAATATGTGTAGAACATTTGTATTTTTATGAGTGAGTGATCTATGATTTCCTTTCTTCCTTCCCCTACGAGGAGTTGAGTGTATATTCTTTTGTGGATAATAATGATATATATTATGGATATTCTATTTAGACGGAAGATTGATTTTTCTCCTTGTCATGCTGCACTGACTGAGGGTGTGCTCATTCTATAAAGTAACAAAATACAAGAACGTTTAAATGTTTTGTTTTGCTTGTGCGAGCTAGGCCTACAGGAGATACAGTTGACAACAAAGCTGATGCTGTGGATGATGATAAAGTGGAACTTGAGAAAAGTAACATCCTTCTGATGGGGCCAACAGGCTCAGGTAATTTATTCTATGTGCTCTTTGTGTATTAAAACTTACGTTGCAATCAGCCTGACAAAATATGACACTTTCCTTCAATTTGAAGCCTAACTAATCACCGCTTGATTGAACATAGTTCAAATTGTTTTTGCTTGCTGTCTAATATTGTCACTACTTATTGTGAACCCTGACATTATTCTGTCTTACTCCCCTTTAATATTGTTTCAAGGACAGGGAAAACACTACTCGCCAAAACCTTGGCACGGTTTGTTAATGTTCCATTTGTTATTGCAGATGCAACTANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAGGGGGGCGGGTTATTAGGCACATTTTCCCGTTTAATTTCTTATTAGAAGTTGTGATTTTCTGGTACAAGTAACCTTTGCTGTGCCATGGATATTCCTTGAAATTTTCTGGTTGAAATCATAGTGTTTTAGGTGGATAATTTTTGTTGCTGTGTGTAGGCAGGATATGTTGGAGAAGATGTGGAGTCTATATTATACAAACTTCTGATGGTATGTATCTGAGTACTGCCAGACGTTCCATTTCATATCCAATATATCATATCAATTAATGATTATGACCATGCAGGACACACTTTTTTTTTTGTTGTGCTCATACCATGTATCGTGCAGCATATCTTTTTCGTTTGGTTTTCATAAATGAAAATATTTATGTTTCTCAATACTTAGGTCAGAACCGGTAACTATTTTCAGTTTTGCTTGGGTCCTTAATATTCTTCTGTCTTAATATTGTCCTCAATTTATTAAATGTCAGGCTGCTGACTATAATGTGGCAGCTGCGCAGCAGGGCATCGTTTACATTGATGAAGTTGATAAAATTACCAAGAAGGTTCTCCTCGGTTCTTTTATTCCTCTCTCCCTTCCCACCTTCTATGGAAGGACTGATGTGGATTTTCTTTACTTGATAATTGTGTTGCATTTTTATGACGCAGGCAGAGAGCCTTAATATTAGCAGAGATGTGTCAGGAGAGGGTGTGCAGCAGGCATTATTAAAAATGCTAGAAGGAACGGTAAGTTTTGCATTTCATTGTCGGTCAACATTTATGATAATGTGCAGAAGCCAAATGTGACTTGTGATGCCATAGAAGCCATTGAGATGATGAGACTGATAATCATGAGTGCTCAACTTTGATTAGAGCCCTATCACTAAAAAAAACTTTGGTTATAGCCTTTCATTGTTCATATTTTTGGTTCTCTAGTTGTTTGCGGTGAGCTTATATGTGATATTTTTTTCACTCTGAACTAGATTGTCAACGTGCCTGAGAAGGGTGCACGAAAGCATCCCAGAGGTGAAAATATCCAGGTTAGTGCTGTACCTTTGATTTACAAAATTTGCTTTCCTAGGAAGGGAAAAAACAGAACAGTGGGCTTTTAGATGTGTTTCTCTGGTCTGGAAATTACCATTTTTCTATTATAGTGGTACGAGCAAATAAGTACCACATGTTTAATTATGTGATCATGGTAGTTATTCTCTGTAGTTCTTGATTTGGCAAATGCCAGGGGTCCTGTTGTCATACATAGTCTTTATAAAAAGCTTCTTTGCAGATCAACACTAAGGATATTCTTTTCATATGTGGGGGTGCCTTCATCGACTTGGAAAAAACAATCTCAGACAGGTTATCTGCATGTAATAGCTACTCCAGTTTACTCCTTACTGAGCTAATTATTTACACAAGTTTTTAACTTGAGAGAAGTTTTGCTTCAATTCAGGCGCCAAGATTCTTCTTTAGGGTTTGGGGCTCCAGTTCGTGCGAACATGAGGACAGGTGGTGTTACAGACGCCATTGTTACTTCTTCTCTGTTGGAGACCGTAAGTGCATACCACTCTTCAGTTTATAAGTAACACTATAACAGCCCATGCTTGTGGCTTGTTTTTATCACTCTCTCCTAATTTTTCATTGAGGATTTATATTTTGACAGGTTGAGAGCAGTGATCTCATTGCATATGGGTTAATACCTGAATTTGTTGGTCGATTCCCTATCCTTGTCAGTTTGTCAGCCTTAACAGAAAACCAACTTGTTCAGGTATAGTTTTATTTTGTTCTTCTTGTAACCATGTATTCTGCAAGATGGCCTTAACACAATTTATTTCTAGTGTCGGGTCAAGTTGCGAATTTTATTTGTAGCGCTAGCTGCACAGGTTGATTATAGTTTCAGTCTACATTCTTTTAGCTGCACAAGTTTTTTGCAATTTCAGTCCACATTCTCTTAATGTTATACTCGCAAGATTTGTGGAACAATATGCCTCTACTTTTGGAAAGTTCTGTACTCTGATATTTGGGAAGATACATAAGTTGATCACCTCTCTAAGCTTTCAAGTTTTGTTGATCTTAATTGGTATAGTTTTTATCTGTCCAACTCAACATGACTTGAATACTGGCATTCGCAGGTCTTGACAGAGCCAAAAAATGCATTAGGAAAGCAGTATAGAAAGATGTTCCAAATGAATGATGTAAGTTATTTTGTGCTTTGCTTTCTTCTCGGATTCCAAGGGAATGATATTTTGTACTTTGTTTCCTCCTATTACATTGGGGGAGTTATTACTTCAGCTGACTGAGTTAAACACTGATATCTCGGAATAACGTGTCACCAGGTCAAGCTCCACTTCATAGAAAATGCCCTGAGATTAATAGCAAGGAAGGCAATGTCTAAGAACACTGGAGCACGGGGCTTGCGATCAATATTGGAGAATCTATTGATGGATGCTATGTATGAGGTATGTCGTTCCTTATTTCTCCACAACTTAAATAATACATTTGGCCGAAGAAAGGATAGCCTAATATGAAAGATGGCAAAACAAAAACCTAGGCTATAGATGTGAAGTTCGGCTCCAATCAATAAGAACTATACCATGTGCAATTACCCAAAGAATGAAGGACGATGGTCGCAAGGAGTAGTCTTAAAAGACAGGAAACAGATAATAGAGGGGACTATCACCCAACCCAAACAATAGTCCAGTATTTGAGTCCCAACTTGAATCTGTTTTTCCACTGCACTAAGTGATTTGACAAACAATGTCTGATGCTTTCACCTACCATACCATACCACCTTGGAGTGTATTGCAGATTCCTGATGTCAGAACAGGTGAGGATATAATTGACGCAGTCATCGTTGATGAAGAGTCCATTGGGTCGAACAGCCCCGGTTCTGGTGCCAAAATACTTTATGGACAGGGGGCATTCGATCGCTATCTTTCAGGACAAAAGGTAGAAGAGCTATATAATTGTTATTAACCACGTTAAGGGTACTTATCCTTCTTGGTAATCTTATTAATACAATGCTGCCAATTTCGTTTTGCAGGCAACAAGAGTAAGAGAGCCAGAACCTGAAGGTGACACAGATCTTCCTTCAGTCGTTGCCAGCAGCATGTAACCAACCATTTGTGGAAGTCTGTGTATTATAGCTTGAACGATGTACATATTACTAGTCTACATCAATTTATGATTCAACAATTGTCACACAGATTAACTGGTTCTCTACAAGTGTTCTATGCTTATAACATTTATTCCGAAGGGGCCTGTTCATCATTCAAGCATGTGGCTGATAAGTCAACAATGTATTTTACTTCTGAAACCATTTCCAAGAGTTGTTTTAGTTGTTCTGAATCTTCTGAAATGGCTCTTAAGGACATCATATTTTATATC

mRNA sequence

TAGATATTCTTGAAGGCTCGAAGTCACAATTTCAGTCAGCTGCATAATTTTCTGTGAGGTTCTGCCGTCTACAATACTACCTCTGTTTCTTCATCCTCTTCAATCCTCTTCCTATTTCCGGTGCCAATTCCAAATCTTTCACATCCCCACCTCTATTAACTTCCAATTTTCTTACTCCCCTGATTCAGTTTGCATCTTCCAGTCCTCCATGAGCCAATAAATTTAGCTGCTTTCTCTTCCCTTTCATTTCCCGATATACATATTACTCACTCATGGCCGCCGCCGCTCTCAGGTCCAGGTCTTCCAAGGAAGTTTCCAGTTTCACGGTTTCTCGCTCTAGACACTCTATATCCAATTATATTCACGCTGCTTCCAATCCCAATTCCCACTGCACGAGCCGTAAAAAGTCGAACGACCTCTATCTCAACTCACCTTACCACTTGGTCTCTTTCAAGCCGGTTTCACTCGGAGGCGATTTTATTCAGAACAGAAGTCAACCATCCGATCATCGGAGGATTTACCGCAATTATAACAAGAACTTGTATGAGAAGTTGGGCAGGGGGGGTTGTTTTATGAGCACTTATGGGGACCCGCCGGAGGTTTGGTCTGGAGATGGGATTGTGATTCGTGGGAGCAATCCAAACTTGAATGGTCGTGGAGGCGGCGGTGGCAGCTCCAACTCTGGTTCTGGTGGTGAGTTCGGCTCGAACTCGAATGATGGGTGTTGGGGTGGTTCTAGTTTGGGACCTAATTTCCCAACCCCGAAGGAAATCTCCAAGGGGCTTGATAAATTTGTAATTGGTCAGGAGAGGGCTAAAAAGGTGCTCTCTGTGGGTGTTTACAATCACTACAAGCGCATCTATCATGAATCGCTACAAAGGCCTACAGGAGATACAGTTGACAACAAAGCTGATGCTGTGGATGATGATAAAGTGGAACTTGAGAAAAGTAACATCCTTCTGATGGGGCCAACAGGCTCAGGATATGTTGGAGAAGATGTGGAGTCTATATTATACAAACTTCTGATGGCTGCTGACTATAATGTGGCAGCTGCGCAGCAGGGCATCGTTTACATTGATGAAGTTGATAAAATTACCAAGAAGGCAGAGAGCCTTAATATTAGCAGAGATGTGTCAGGAGAGGGTGTGCAGCAGGCATTATTAAAAATGCTAGAAGGAACGATTGTCAACGTGCCTGAGAAGGGTGCACGAAAGCATCCCAGAGGTGAAAATATCCAGATCAACACTAAGGATATTCTTTTCATATGTGGGGGTGCCTTCATCGACTTGGAAAAAACAATCTCAGACAGGCGCCAAGATTCTTCTTTAGGGTTTGGGGCTCCAGTTCGTGCGAACATGAGGACAGGTGGTGTTACAGACGCCATTGTTACTTCTTCTCTGTTGGAGACCGTTGAGAGCAGTGATCTCATTGCATATGGGTTAATACCTGAATTTGTTGGTCGATTCCCTATCCTTGTCAGTTTGTCAGCCTTAACAGAAAACCAACTTGTTCAGGTCTTGACAGAGCCAAAAAATGCATTAGGAAAGCAGTATAGAAAGATGTTCCAAATGAATGATGTCAAGCTCCACTTCATAGAAAATGCCCTGAGATTAATAGCAAGGAAGGCAATGTCTAAGAACACTGGAGCACGGGGCTTGCGATCAATATTGGAGAATCTATTGATGGATGCTATGTATGAGATTCCTGATGTCAGAACAGGTGAGGATATAATTGACGCAGTCATCGTTGATGAAGAGTCCATTGGGTCGAACAGCCCCGGTTCTGGTGCCAAAATACTTTATGGACAGGGGGCATTCGATCGCTATCTTTCAGGACAAAAGGCAACAAGAGTAAGAGAGCCAGAACCTGAAGGTGACACAGATCTTCCTTCAGTCGTTGCCAGCAGCATGTAACCAACCATTTGTGGAAGTCTGTGTATTATAGCTTGAACGATGTACATATTACTAGTCTACATCAATTTATGATTCAACAATTGTCACACAGATTAACTGGTTCTCTACAAGTGTTCTATGCTTATAACATTTATTCCGAAGGGGCCTGTTCATCATTCAAGCATGTGGCTGATAAGTCAACAATGTATTTTACTTCTGAAACCATTTCCAAGAGTTGTTTTAGTTGTTCTGAATCTTCTGAAATGGCTCTTAAGGACATCATATTTTATATC

Coding sequence (CDS)

ATGGCCGCCGCCGCTCTCAGGTCCAGGTCTTCCAAGGAAGTTTCCAGTTTCACGGTTTCTCGCTCTAGACACTCTATATCCAATTATATTCACGCTGCTTCCAATCCCAATTCCCACTGCACGAGCCGTAAAAAGTCGAACGACCTCTATCTCAACTCACCTTACCACTTGGTCTCTTTCAAGCCGGTTTCACTCGGAGGCGATTTTATTCAGAACAGAAGTCAACCATCCGATCATCGGAGGATTTACCGCAATTATAACAAGAACTTGTATGAGAAGTTGGGCAGGGGGGGTTGTTTTATGAGCACTTATGGGGACCCGCCGGAGGTTTGGTCTGGAGATGGGATTGTGATTCGTGGGAGCAATCCAAACTTGAATGGTCGTGGAGGCGGCGGTGGCAGCTCCAACTCTGGTTCTGGTGGTGAGTTCGGCTCGAACTCGAATGATGGGTGTTGGGGTGGTTCTAGTTTGGGACCTAATTTCCCAACCCCGAAGGAAATCTCCAAGGGGCTTGATAAATTTGTAATTGGTCAGGAGAGGGCTAAAAAGGTGCTCTCTGTGGGTGTTTACAATCACTACAAGCGCATCTATCATGAATCGCTACAAAGGCCTACAGGAGATACAGTTGACAACAAAGCTGATGCTGTGGATGATGATAAAGTGGAACTTGAGAAAAGTAACATCCTTCTGATGGGGCCAACAGGCTCAGGATATGTTGGAGAAGATGTGGAGTCTATATTATACAAACTTCTGATGGCTGCTGACTATAATGTGGCAGCTGCGCAGCAGGGCATCGTTTACATTGATGAAGTTGATAAAATTACCAAGAAGGCAGAGAGCCTTAATATTAGCAGAGATGTGTCAGGAGAGGGTGTGCAGCAGGCATTATTAAAAATGCTAGAAGGAACGATTGTCAACGTGCCTGAGAAGGGTGCACGAAAGCATCCCAGAGGTGAAAATATCCAGATCAACACTAAGGATATTCTTTTCATATGTGGGGGTGCCTTCATCGACTTGGAAAAAACAATCTCAGACAGGCGCCAAGATTCTTCTTTAGGGTTTGGGGCTCCAGTTCGTGCGAACATGAGGACAGGTGGTGTTACAGACGCCATTGTTACTTCTTCTCTGTTGGAGACCGTTGAGAGCAGTGATCTCATTGCATATGGGTTAATACCTGAATTTGTTGGTCGATTCCCTATCCTTGTCAGTTTGTCAGCCTTAACAGAAAACCAACTTGTTCAGGTCTTGACAGAGCCAAAAAATGCATTAGGAAAGCAGTATAGAAAGATGTTCCAAATGAATGATGTCAAGCTCCACTTCATAGAAAATGCCCTGAGATTAATAGCAAGGAAGGCAATGTCTAAGAACACTGGAGCACGGGGCTTGCGATCAATATTGGAGAATCTATTGATGGATGCTATGTATGAGATTCCTGATGTCAGAACAGGTGAGGATATAATTGACGCAGTCATCGTTGATGAAGAGTCCATTGGGTCGAACAGCCCCGGTTCTGGTGCCAAAATACTTTATGGACAGGGGGCATTCGATCGCTATCTTTCAGGACAAAAGGCAACAAGAGTAAGAGAGCCAGAACCTGAAGGTGACACAGATCTTCCTTCAGTCGTTGCCAGCAGCATGTAA

Protein sequence

MAAAALRSRSSKEVSSFTVSRSRHSISNYIHAASNPNSHCTSRKKSNDLYLNSPYHLVSFKPVSLGGDFIQNRSQPSDHRRIYRNYNKNLYEKLGRGGCFMSTYGDPPEVWSGDGIVIRGSNPNLNGRGGGGGSSNSGSGGEFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKFVIGQERAKKVLSVGVYNHYKRIYHESLQRPTGDTVDNKADAVDDDKVELEKSNILLMGPTGSGYVGEDVESILYKLLMAADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQINTKDILFICGGAFIDLEKTISDRRQDSSLGFGAPVRANMRTGGVTDAIVTSSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHFIENALRLIARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESIGSNSPGSGAKILYGQGAFDRYLSGQKATRVREPEPEGDTDLPSVVASSM
Homology
[Close]
BLAST of Cp4.1LG14g06870 vs. Swiss-Prot
Match: CLPX1_ARATH (CLP protease regulatory subunit CLPX1, mitochondrial OS=Arabidopsis thaliana GN=CLPX1 PE=2 SV=1)

HSP 1 Score: 658.7 bits (1698), Expect = 5.6e-188
Identity = 378/587 (64.40%), Postives = 434/587 (73.94%), Query Frame = 1 

Query: 3   AAALRSRSSKEVSSFTVSRSRHSISNYIHAASNPNS--HCTSRKKSNDLYLNSPYHLVSF 62
           AAALRS +S+E +S T+S  R+ I N IH A    S  HC  R KS++ +   PY     
Sbjct: 2   AAALRSNTSRETASLTLSHFRYFIFNRIHTARTATSPPHCNHRSKSDEKF---PY----- 61

Query: 63  KPVSLGGDFIQNRS--QPSDHRRIYRNYNKNLYEKLGRGGCFMSTYGDPPEVWS--GDGI 122
           K  SLG  F+ NR   +  +  + Y    K     +G     +S+ GDPP++W   GDG+
Sbjct: 62  KISSLGTSFLDNRGGGERRNSTKCYAAQKK--LSGVGSSVVILSSQGDPPDLWQPPGDGV 121

Query: 123 VIR--GSNPNLNGRGGGGGSSNSGSGGEFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKF 182
            +R  GS+ NL   GGGGGSS  G G   GSNS + CWGGS+LG +FPTPKEI KGL+KF
Sbjct: 122 SVRVNGSSVNLGRGGGGGGSSPGGPGNGTGSNSKEDCWGGSNLGSDFPTPKEICKGLNKF 181

Query: 183 VIGQERAKKVLSVGVYNHYKRIYHESLQ-RPTGDTVDNKADAVDDDKVELEKSNILLMGP 242
           VIGQERAKKVLSV VYNHYKRIYHES Q R  G+T    A   DDD VELEKSNILLMGP
Sbjct: 182 VIGQERAKKVLSVAVYNHYKRIYHESSQKRSAGETDSTAAKPADDDMVELEKSNILLMGP 241

Query: 243 TGSG----------------------------YVGEDVESILYKLLMAADYNVAAAQQGI 302
           TGSG                            YVGEDVESILYKLL  ADYNVAAAQQGI
Sbjct: 242 TGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGI 301

Query: 303 VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQINT 362
           VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRG+NIQI+T
Sbjct: 302 VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDT 361

Query: 363 KDILFICGGAFIDLEKTISDRRQDSSLGFGAPVRANMRTGGVTDAIVTSSLLETVESSDL 422
           KDILFICGGAF+D+EKTIS+RR DSS+GFGAPVRANMR GGVT+A V S+L+ETVESSDL
Sbjct: 362 KDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANMRAGGVTNAAVASNLMETVESSDL 421

Query: 423 IAYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHFIENAL 482
           IAYGLIPEFVGRFP+LVSLSALTENQL+QVLTEPKNALGKQY+KM+QMN VKLHF E+AL
Sbjct: 422 IAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKMYQMNSVKLHFTESAL 481

Query: 483 RLIARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESI-GSNSPGS 542
           RLIARKA++KNTGARGLR++LE++LMD+MYEIPD  TG D+I+AV+VDEE++ G    GS
Sbjct: 482 RLIARKAITKNTGARGLRALLESILMDSMYEIPDEGTGSDMIEAVVVDEEAVEGEGRRGS 541

Query: 543 GAKILYGQGAFDRYL-------SGQKATRVREPEPEGDTDLPSVVAS 545
           GAKIL G+GA  RYL       S Q      + E E + ++PSVVAS
Sbjct: 542 GAKILRGKGALARYLSETNSKDSPQTTKEGSDGETEVEAEIPSVVAS 578

[Close]
BLAST of Cp4.1LG14g06870 vs. Swiss-Prot
Match: CLPX3_ARATH (CLP protease regulatory subunit CLPX3, mitochondrial OS=Arabidopsis thaliana GN=CLPX3 PE=2 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 9.4e-151
Identity = 283/409 (69.19%), Postives = 326/409 (79.71%), Query Frame = 1 

Query: 152 WGGSSLGPNFPTPKEISKGLDKFVIGQERAKKVLSVGVYNHYKRIYHESLQRPTG-DTVD 211
           WGG+ LG +FPTPKEI K LDKFVIGQ RAKKVLSV VYNHYKRIYH S+++ +    +D
Sbjct: 240 WGGAGLGRDFPTPKEICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKKGSAAQPID 299

Query: 212 NKADAVDDDKVELEKSNILLMGPTGSG----------------------------YVGED 271
                 DDD VEL+KSN+LLMGPTGSG                            YVG+D
Sbjct: 300 ------DDDNVELDKSNVLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDD 359

Query: 272 VESILYKLLMAADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 331
           VESIL+KLL  A++NV AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK+LEG
Sbjct: 360 VESILHKLLTVAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKLLEG 419

Query: 332 TIVNVPEKGARKHPRGENIQINTKDILFICGGAFIDLEKTISDRRQDSSLGFGAPVRANM 391
           TIVNVP KGARKHPRG++IQI+TKDILFICGGAF+DLEKTI DRRQDSS+GFGAPVRANM
Sbjct: 420 TIVNVPGKGARKHPRGDHIQIDTKDILFICGGAFVDLEKTIVDRRQDSSIGFGAPVRANM 479

Query: 392 RTGGVTDAIVTSSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNA 451
            T GVT   +TSSLLE+VES+DL AYGLIPEFVGRFPILVSLSALTE+QL++VL EPKNA
Sbjct: 480 ATSGVTSGAITSSLLESVESADLTAYGLIPEFVGRFPILVSLSALTEDQLIRVLVEPKNA 539

Query: 452 LGKQYRKMFQMNDVKLHFIENALRLIARKAMSKNTGARGLRSILENLLMDAMYEIPDVRT 511
           LGKQY+K+F MN+VKLHF E AL +I+++AM KNTGARGLR++LE++L +AM+EIPD + 
Sbjct: 540 LGKQYKKLFSMNNVKLHFTEKALEIISKQAMVKNTGARGLRALLESILTEAMFEIPDDKK 599

Query: 512 GEDIIDAVIVDEESIGSN-SPGSGAKILYGQGAFDRYLSGQKATRVREP 531
           G++ IDAVIVDEES  S  S G  AKIL G GAF+RYLS  K+    EP
Sbjct: 600 GDERIDAVIVDEESTSSEASRGCTAKILRGDGAFERYLSENKSKDATEP 642

[Close]
BLAST of Cp4.1LG14g06870 vs. Swiss-Prot
Match: CLPX2_ARATH (CLP protease regulatory subunit CLPX2, mitochondrial OS=Arabidopsis thaliana GN=CLPX2 PE=3 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 6.0e-105
Identity = 198/290 (68.28%), Postives = 242/290 (83.45%), Query Frame = 1 

Query: 234 TGSGYVGEDVESILYKLLMAADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQ 293
           T + YVGEDVESILYKL + A  NV  AQ+GIVYIDEVDK+T K+ S N  RDVSGEGVQ
Sbjct: 299 TQASYVGEDVESILYKLYVEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQ 358

Query: 294 QALLKMLEGTIVNVP--EKGARKHPRGENIQINTKDILFICGGAFIDLEKTISDRRQDSS 353
           Q+LLK+LEGT+V+VP  EKG R+ PRG++IQ++TKDILFICGGAFIDLEKT+S+R+ D+S
Sbjct: 359 QSLLKLLEGTVVSVPIPEKGLRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDAS 418

Query: 354 LGFGAPVRANMRTGGVTDAIVTSSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQ 413
           +GFGA VR NM T G++ A VTSSLLE+++S DL+AYGLIPEFVGR PILVSLSAL E+Q
Sbjct: 419 IGFGASVRTNMSTSGLSSAAVTSSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQ 478

Query: 414 LVQVLTEPKNALGKQYRKMFQMNDVKLHFIENALRLIARKAMSKNTGARGLRSILENLLM 473
           LVQVLTEPK+ALGKQY+K+F+MN+V+L F E A RLIARKAMSKNTGARGLRSILE++L 
Sbjct: 479 LVQVLTEPKSALGKQYKKLFRMNNVQLQFTEGATRLIARKAMSKNTGARGLRSILESILT 538

Query: 474 DAMYEIPD-VRTGEDIIDAVIVDEESIGS-NSPGSGAKILYGQGAFDRYL 520
           +AM+E+PD +  G   I AV+VDEE++GS  SPG GAKIL G     +++
Sbjct: 539 EAMFEVPDSITEGSQSIKAVLVDEEAVGSVGSPGCGAKILKGDNVLQQFV 588

[Close]
BLAST of Cp4.1LG14g06870 vs. Swiss-Prot
Match: CLPX_RHIME (ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhizobium meliloti (strain 1021) GN=clpX PE=3 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 4.0e-93
Identity = 188/371 (50.67%), Postives = 253/371 (68.19%), Query Frame = 1 

Query: 162 PTPKEISKGLDKFVIGQERAKKVLSVGVYNHYKRIYHESLQRPTGDTVDNKADAVDDDKV 221
           PTP+EI K LD++VIGQ++AK++LSV V+NHYKR+ H                A     V
Sbjct: 67  PTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAH----------------AAKSSDV 126

Query: 222 ELEKSNILLMGPTG----------------------------SGYVGEDVESILYKLLMA 281
           EL KSNI+L+GPTG                            +GYVGEDVE+I+ KLL A
Sbjct: 127 ELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQA 186

Query: 282 ADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGAR 341
           ADYNV  AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G R
Sbjct: 187 ADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGGR 246

Query: 342 KHPRGENIQINTKDILFICGGAFIDLEKTISDRRQDSSLGFGAPVRA--NMRTGGVTDAI 401
           KHP+ E +Q++T +ILFICGGAF  L+K IS R + +S+GFGA VRA  + R G V    
Sbjct: 247 KHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRAPEDRRVGEV---- 306

Query: 402 VTSSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMF 461
                L  +E  DL+ +GLIPEF+GR P+L +L  L E+ L+Q+L+EPKNAL KQY+++F
Sbjct: 307 -----LRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLF 366

Query: 462 QMNDVKLHFIENALRLIARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVI 503
           +M DV+L+F E+ALR IAR+A+ + TGARGLRSI+E +L+D M+E+P   T E + + VI
Sbjct: 367 EMEDVELNFHEDALREIARRAIVRKTGARGLRSIMEKILLDTMFELP---TLEGVREVVI 409

[Close]
BLAST of Cp4.1LG14g06870 vs. Swiss-Prot
Match: CLPX_SINMW (ATP-dependent Clp protease ATP-binding subunit ClpX OS=Sinorhizobium medicae (strain WSM419) GN=clpX PE=3 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.2e-92
Identity = 187/371 (50.40%), Postives = 253/371 (68.19%), Query Frame = 1 

Query: 162 PTPKEISKGLDKFVIGQERAKKVLSVGVYNHYKRIYHESLQRPTGDTVDNKADAVDDDKV 221
           PTP+EI K LD++VIGQ++AK++LSV V+NHYKR+ H                A     V
Sbjct: 67  PTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAH----------------AAKSSDV 126

Query: 222 ELEKSNILLMGPTG----------------------------SGYVGEDVESILYKLLMA 281
           EL KSNI+L+GPTG                            +GYVGEDVE+I+ KLL A
Sbjct: 127 ELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQA 186

Query: 282 ADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGAR 341
           ADYNV  AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G R
Sbjct: 187 ADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGGR 246

Query: 342 KHPRGENIQINTKDILFICGGAFIDLEKTISDRRQDSSLGFGAPVRA--NMRTGGVTDAI 401
           KHP+ E +Q++T +ILFICGGAF  L+K IS R + +S+GFGA VRA  + R G V    
Sbjct: 247 KHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRAPEDRRVGEV---- 306

Query: 402 VTSSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMF 461
                L  +E  DL+ +GLIPEF+GR P+L +L  L E+ L+Q+L+EPKNAL KQY+++F
Sbjct: 307 -----LRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLF 366

Query: 462 QMNDVKLHFIENALRLIARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVI 503
           +M DV+L+F E+ALR IAR+A+ + TGARGLRSI+E +L+D M+E+P   T E + + VI
Sbjct: 367 EMEDVELNFHEDALREIARRAIVRKTGARGLRSIMEKILLDTMFELP---TLEGVREVVI 409

[Close]
BLAST of Cp4.1LG14g06870 vs. TrEMBL
Match: E5GBA0_CUCME (ATP-dependent clp protease ATP-binding subunit clpx OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 907.1 bits (2343), Expect = 1.0e-260
Identity = 480/576 (83.33%), Postives = 506/576 (87.85%), Query Frame = 1 

Query: 2   AAAALRSRSSKEVSSFTVSRSRHSISNYIHAASNPNSHCTSRKKSNDLYLNSPYHLVSFK 61
           AAAALRSRSSKEV++ T+SR RH ISN IHAA +P       KKSND +LNSPYHLVSFK
Sbjct: 3   AAAALRSRSSKEVATLTLSRCRHCISNSIHAAFSP-------KKSNDCFLNSPYHLVSFK 62

Query: 62  PVSLGGDFIQNRSQPSDHRRIYRNYNKNLYEKLGRGGCFMSTYGDPPEVWSGDGIVIRGS 121
           PVSL GDF  + +QP DHRRIY+N  K+L  +L + GCFMSTYGDPPEVWSGDGIVIRGS
Sbjct: 63  PVSLRGDFFDSGTQPLDHRRIYQNSTKSLNHRLSKKGCFMSTYGDPPEVWSGDGIVIRGS 122

Query: 122 NPNLNGRGGGGGSSNSGSGGEFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKFVIGQERA 181
           N +LNGRGG GGSSN GSGG FGSNSNDGCWGGSSLGPNFPTPKEI+KGLDKFVIGQ+RA
Sbjct: 123 NSSLNGRGGDGGSSNPGSGGGFGSNSNDGCWGGSSLGPNFPTPKEIAKGLDKFVIGQDRA 182

Query: 182 KKVLSVGVYNHYKRIYHESLQRPTGDTVDNKADAVDDDKVELEKSNILLMGPTGSG---- 241
           KKVLSVGVYNHYKRIYHESLQRPTGD  +NKADA DDDKVELEKSNILLMGPTGSG    
Sbjct: 183 KKVLSVGVYNHYKRIYHESLQRPTGDAFNNKADAADDDKVELEKSNILLMGPTGSGKTLL 242

Query: 242 ------------------------YVGEDVESILYKLLMAADYNVAAAQQGIVYIDEVDK 301
                                   YVGEDVESILYKLLM ADYNVAAAQQGIVYIDEVDK
Sbjct: 243 AKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDK 302

Query: 302 ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQINTKDILFICG 361
           ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQI+TKDILFICG
Sbjct: 303 ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILFICG 362

Query: 362 GAFIDLEKTISDRRQDSSLGFGAPVRANMRTGGVTDAIVTSSLLETVESSDLIAYGLIPE 421
           GAFIDLEKTIS+RRQDSSLGFGAPVRANMR GGVTDA+VTSSLLETVESSDLIAYGLIPE
Sbjct: 363 GAFIDLEKTISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLIAYGLIPE 422

Query: 422 FVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHFIENALRLIARKAM 481
           FVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHF ENALRLIARKAM
Sbjct: 423 FVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHFTENALRLIARKAM 482

Query: 482 SKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESIGSNSPGSGAKILYGQG 541
           SKNTGARGLRSILENLLMD+MYEIPD+RTG+DIIDAV+VDEES+GS+SPG GAKILYG+G
Sbjct: 483 SKNTGARGLRSILENLLMDSMYEIPDIRTGKDIIDAVVVDEESVGSDSPGFGAKILYGKG 542

Query: 542 AFDRYLSGQKAT---RVREPEPEGDTDLPSVVASSM 547
           A DRYLSGQKAT     REPEPEG+TDLPSVVAS M
Sbjct: 543 ALDRYLSGQKATSQDSEREPEPEGETDLPSVVASGM 571

[Close]
BLAST of Cp4.1LG14g06870 vs. TrEMBL
Match: A0A0A0L6R6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G239830 PE=4 SV=1)

HSP 1 Score: 906.4 bits (2341), Expect = 1.7e-260
Identity = 482/576 (83.68%), Postives = 505/576 (87.67%), Query Frame = 1 

Query: 2   AAAALRSRSSKEVSSFTVSRSRHSISNYIHAASNPNSHCTSRKKSNDLYLNSPYHLVSFK 61
           AAAALRSRSSKEV++ T+SR RH ISN IHAA  PN       KSND +LNSPYHLVSFK
Sbjct: 3   AAAALRSRSSKEVATLTLSRCRHCISNSIHAAFTPN-------KSNDCFLNSPYHLVSFK 62

Query: 62  PVSLGGDFIQNRSQPSDHRRIYRNYNKNLYEKLGRGGCFMSTYGDPPEVWSGDGIVIRGS 121
           PVSL GDF    +QP DHRRIY++  K L  +L + GCFMSTYGDPPEVWSGDGIVIRGS
Sbjct: 63  PVSLRGDFFDTGTQPLDHRRIYQSPTKTLNHRLSKKGCFMSTYGDPPEVWSGDGIVIRGS 122

Query: 122 NPNLNGRGGGGGSSNSGSGGEFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKFVIGQERA 181
           N +LNGRGG GGSSNSGSGG FGSNSNDGCWGGSSLGPNFPTPKEI+KGLDKFVIGQERA
Sbjct: 123 NSSLNGRGGDGGSSNSGSGGGFGSNSNDGCWGGSSLGPNFPTPKEIAKGLDKFVIGQERA 182

Query: 182 KKVLSVGVYNHYKRIYHESLQRPTGDTVDNKADAVDDDKVELEKSNILLMGPTGSG---- 241
           KKVLSVGVYNHYKRIYHESLQRPTGDT +NKADA DDDKVELEKSNILLMGPTGSG    
Sbjct: 183 KKVLSVGVYNHYKRIYHESLQRPTGDTFNNKADAADDDKVELEKSNILLMGPTGSGKTLL 242

Query: 242 ------------------------YVGEDVESILYKLLMAADYNVAAAQQGIVYIDEVDK 301
                                   YVGEDVESILYKLLM ADYNVAAAQQGIVYIDEVDK
Sbjct: 243 AKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDK 302

Query: 302 ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQINTKDILFICG 361
           ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQI+TKDILFICG
Sbjct: 303 ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILFICG 362

Query: 362 GAFIDLEKTISDRRQDSSLGFGAPVRANMRTGGVTDAIVTSSLLETVESSDLIAYGLIPE 421
           GAFIDLEKTIS+RRQDSSLGFGAPVRANMR GGVTDA+VTSSLLETVESSDLIAYGLIPE
Sbjct: 363 GAFIDLEKTISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLIAYGLIPE 422

Query: 422 FVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHFIENALRLIARKAM 481
           FVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHF EN+LRLIARKAM
Sbjct: 423 FVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHFTENSLRLIARKAM 482

Query: 482 SKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESIGSNSPGSGAKILYGQG 541
           SKNTGARGLRSILENLLMD+MYEIPDVRTG+DIIDAVIVDEES+GS+SPG GAKILYG+G
Sbjct: 483 SKNTGARGLRSILENLLMDSMYEIPDVRTGKDIIDAVIVDEESVGSDSPGFGAKILYGKG 542

Query: 542 AFDRYLSGQKAT---RVREPEPEGDTDLPSVVASSM 547
           A DR+LSGQKAT     REPEPEG+TDLPSVVAS M
Sbjct: 543 ALDRHLSGQKATSQDSEREPEPEGETDLPSVVASGM 571

[Close]
BLAST of Cp4.1LG14g06870 vs. TrEMBL
Match: M5X1W5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003261mg PE=4 SV=1)

HSP 1 Score: 765.8 bits (1976), Expect = 3.6e-218
Identity = 418/586 (71.33%), Postives = 467/586 (79.69%), Query Frame = 1 

Query: 3   AAALRSRSSKEVSSFTVSRSRHSISNYIHAASNPNSHCTSRKKSNDLYLNSPYHLVSFKP 62
           AAALRS+ S++  S TVS+ R+ + NY+HA    NSH   R K+ DL++N+PYH  SFKP
Sbjct: 2   AAALRSKPSRDTVSSTVSQFRYFVFNYLHAGRVVNSHYAHRTKNEDLFMNTPYHFTSFKP 61

Query: 63  VSLGGDFIQNRSQPSDHRRIYRNYNKNLYEKLGRGGC------FMSTYGDPPEVWSGDGI 122
           V+LGG+F++  SQ  D  R+ +  +KN     GR  C       +S+ GDPPEVWSGDGI
Sbjct: 62  VALGGNFVEKGSQIFDRPRVAQKTSKNSDRNWGRKLCSSRCNSVLSSQGDPPEVWSGDGI 121

Query: 123 VIR-GSNPNLNGRGGGGGSSNSGSGGEFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKFV 182
           V+R G + NL    GGGG  + GSGG F SNS D CWGGSSLG NFPTPKEI KGLDKFV
Sbjct: 122 VVRAGPSSNLVRGSGGGGGPSPGSGGGFESNSKDECWGGSSLGNNFPTPKEICKGLDKFV 181

Query: 183 IGQERAKKVLSVGVYNHYKRIYHESLQR-PTGDTVDNKADAVDDDKVELEKSNILLMGPT 242
           IGQE+AKKVLSV VYNHYKRIYHESLQ+   GD+ ++K DA+DDD+VELEKSNILLMGPT
Sbjct: 182 IGQEQAKKVLSVAVYNHYKRIYHESLQKWSAGDSGNSKVDAMDDDRVELEKSNILLMGPT 241

Query: 243 GSG----------------------------YVGEDVESILYKLLMAADYNVAAAQQGIV 302
           GSG                            YVGEDVESILYKLL  ADYNVAAAQQGIV
Sbjct: 242 GSGKTLLAKTLARFVNVPFVIADATTLTQERYVGEDVESILYKLLTVADYNVAAAQQGIV 301

Query: 303 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQINTK 362
           YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQI+TK
Sbjct: 302 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTK 361

Query: 363 DILFICGGAFIDLEKTISDRRQDSSLGFGAPVRANMRTGGVTDAIVTSSLLETVESSDLI 422
           DILFICGGAFIDLEKTIS+RRQDSS+GFGAPVRANMRTGGVTDA VTSSLLETVESSDLI
Sbjct: 362 DILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGVTDAAVTSSLLETVESSDLI 421

Query: 423 AYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHFIENALR 482
            YGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQY+KMF+MN VKLHF E+ALR
Sbjct: 422 RYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYKKMFRMNGVKLHFTESALR 481

Query: 483 LIARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESIGSNSPGSGA 542
           LIARKA+SKNTGARGLR+ILEN+LMDAMYEIPDVR G+DIIDAV++DEE++GS + GSGA
Sbjct: 482 LIARKAISKNTGARGLRAILENILMDAMYEIPDVRAGDDIIDAVVIDEEAVGSEAQGSGA 541

Query: 543 KILYGQGAFDRYLSGQKATRVR--------EPEPEGDTDLPSVVAS 545
           KILYG+GA D YLS  KA  V         + EPE +T+L SVVAS
Sbjct: 542 KILYGKGALDHYLSQNKAKEVETATTEGSSDGEPEVETELSSVVAS 587

[Close]
BLAST of Cp4.1LG14g06870 vs. TrEMBL
Match: A0A061G2X2_THECC (CLP protease regulatory subunit X isoform 1 OS=Theobroma cacao GN=TCM_015415 PE=4 SV=1)

HSP 1 Score: 749.2 bits (1933), Expect = 3.5e-213
Identity = 416/592 (70.27%), Postives = 471/592 (79.56%), Query Frame = 1 

Query: 2   AAAALRSRSSKEVSSFTVSRSRHSISNYIHAASNPNS-HCTS-RKKSNDLYLNSPYHLVS 61
           AAAALRS+ S E +S TVS+ RH +SNY+H     +S H T+ R K +D ++N+PYH  S
Sbjct: 3   AAAALRSKPSVETASLTVSQFRHFLSNYMHCGRMASSSHSTTYRTKWDDHFVNTPYHFTS 62

Query: 62  FKPVSLGGDFIQNRSQPSDHRRIYRNYNKN----LYEKLGRGGC-FMSTYGDPPEVWS-- 121
           FKPVSL G+ ++  SQ  D RR  R  NK+    L EKL    C  +S+YGDPPEVW   
Sbjct: 63  FKPVSLRGELVEKGSQLLDIRRNSRGLNKDFDRELREKLNYSNCTVLSSYGDPPEVWQPP 122

Query: 122 GDGIVIRGSNPNLNGRGGGGGS-----SNSGSGGEFGSNSNDGCWGGSSLGPNFPTPKEI 181
           GDG+ IR S  NL GRGGGGG+     +++GSGG FG  S DGCWGGS+LG NFPTPK+I
Sbjct: 123 GDGVAIRVSGVNL-GRGGGGGAGGGGGASTGSGGGFGPGSKDGCWGGSNLGHNFPTPKDI 182

Query: 182 SKGLDKFVIGQERAKKVLSVGVYNHYKRIYHESLQ-RPTGDTVDNKADAVDDDKVELEKS 241
            KGLDKFVIGQERAKKVLSV VYNHY RIYHESLQ RP GD+V N AD +DDD VELEKS
Sbjct: 183 CKGLDKFVIGQERAKKVLSVAVYNHYMRIYHESLQKRPAGDSVSNIADVLDDDIVELEKS 242

Query: 242 NILLMGPTGSG----------------------------YVGEDVESILYKLLMAADYNV 301
           NILLMGPTGSG                            YVGEDVESILYKLL+ ADYNV
Sbjct: 243 NILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLVVADYNV 302

Query: 302 AAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRG 361
           AAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRG
Sbjct: 303 AAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRG 362

Query: 362 ENIQINTKDILFICGGAFIDLEKTISDRRQDSSLGFGAPVRANMRTGGVTDAIVTSSLLE 421
           ENIQI+TKDILFICGGAFID+EKTIS+RRQDSS+GFGAPVRANMR GGVT+A V S+L+E
Sbjct: 363 ENIQIDTKDILFICGGAFIDIEKTISERRQDSSIGFGAPVRANMRAGGVTNAAVASTLME 422

Query: 422 TVESSDLIAYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKL 481
           +VESSDLIAYGLIPEFVGRFP+LVSL ALTE QLVQVLTEPKNALGKQY++MFQMN VKL
Sbjct: 423 SVESSDLIAYGLIPEFVGRFPVLVSLLALTEEQLVQVLTEPKNALGKQYKRMFQMNGVKL 482

Query: 482 HFIENALRLIARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESIG 541
           H  ENAL+LIARKA+SKNTGARGLR+ILEN+LMD+MYEIPDVRTG+D+IDAV+VDEE++G
Sbjct: 483 HITENALKLIARKAISKNTGARGLRAILENILMDSMYEIPDVRTGDDVIDAVVVDEEAVG 542

Query: 542 SNSPGSGAKILYGQGAFDRYLSGQKATRVR------EPEPEGDTDLPSVVAS 545
           S   G+GAKILYG+GA DRYLS QK+  +       + EPE +T+LPSVVAS
Sbjct: 543 SEGRGTGAKILYGKGALDRYLSQQKSKDLETTAEGSDGEPEVETELPSVVAS 593

[Close]
BLAST of Cp4.1LG14g06870 vs. TrEMBL
Match: E0CV48_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g01860 PE=4 SV=1)

HSP 1 Score: 731.1 bits (1886), Expect = 9.9e-208
Identity = 401/583 (68.78%), Postives = 460/583 (78.90%), Query Frame = 1 

Query: 3   AAALRSRSSKEVSSFTVSRSRHSISNYIHAASNPNSHCTSRKKSNDLYLNS--PYHLVSF 62
           AAALRS+SS+E +  T S+ R+ I N++HA   PNS+ + +   +  + +S  PYH  SF
Sbjct: 2   AAALRSKSSRETALLTFSQFRYFILNHMHAGRLPNSYISHKPNCDHCFTHSHTPYHFTSF 61

Query: 63  KPVSLGGDFIQNRSQPSDHRRIYR-NYNKNLYEKLGRGGCFMSTYGDPPEVWSGDGIVIR 122
           KPVSL G+ +    +  D++R  +  ++ N  +KL R    ++++GDPPEVWSGDGIV+R
Sbjct: 62  KPVSLRGELVDKGLEFFDNQRFSKVGFSTNESKKLSRD-TILNSFGDPPEVWSGDGIVVR 121

Query: 123 --GSNPNLNGRGGGGGSSNSGSGGEFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKFVIG 182
             GS  NL  RGGGG  +N G+G  FGSNS D  WGGS+LG NFPTPKEI +GLDKFVIG
Sbjct: 122 QGGSGSNLV-RGGGGAGANGGAGSGFGSNSKDESWGGSNLGHNFPTPKEICRGLDKFVIG 181

Query: 183 QERAKKVLSVGVYNHYKRIYHESLQR-PTGDTVDNKADAVDDDKVELEKSNILLMGPTGS 242
           QERAKKVLSV VYNHYKRIYH+SLQ+ P  DT D+KA+A D+D VELEKSNILLMGPTGS
Sbjct: 182 QERAKKVLSVAVYNHYKRIYHQSLQKWPAEDTSDDKAEATDNDSVELEKSNILLMGPTGS 241

Query: 243 G----------------------------YVGEDVESILYKLLMAADYNVAAAQQGIVYI 302
           G                            YVGEDVESILYKLLM ADYNVAAAQQGIVYI
Sbjct: 242 GKTLLAKTLARFVNVPFVIADATTLTQARYVGEDVESILYKLLMVADYNVAAAQQGIVYI 301

Query: 303 DEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQINTKDI 362
           DEVDKITKKAESLN+SRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRG+NIQI+TKDI
Sbjct: 302 DEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDI 361

Query: 363 LFICGGAFIDLEKTISDRRQDSSLGFGAPVRANMRTGGVTDAIVTSSLLETVESSDLIAY 422
           LFICGGAFIDLEKTIS+RRQDSS+GFGAPVRANMRTGG TDA V SSLLETVESSDLI+Y
Sbjct: 362 LFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGPTDAAVASSLLETVESSDLISY 421

Query: 423 GLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHFIENALRLI 482
           GLIPEFVGRFPILVSLSALTENQLV+VLTEPKNALGKQY+KMFQMN VKLHF +NALRLI
Sbjct: 422 GLIPEFVGRFPILVSLSALTENQLVEVLTEPKNALGKQYKKMFQMNGVKLHFTKNALRLI 481

Query: 483 ARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESIGSNSPGSGAKI 542
           +RKAMSKNTGARGLRSILEN+LM+AMYEIPDVRTG DIIDAV+VD+E++GS+  G GAKI
Sbjct: 482 SRKAMSKNTGARGLRSILENILMNAMYEIPDVRTGNDIIDAVVVDDEAVGSDGHGFGAKI 541

Query: 543 LYGQGAFDRYLSGQKATRVREP-------EPEGDTDLPSVVAS 545
           LYG+GA D YLS  K      P       E E + ++PS+VAS
Sbjct: 542 LYGKGALDCYLSQHKLKETETPMEGSSDGEAEAEAEIPSIVAS 582

[Close]
BLAST of Cp4.1LG14g06870 vs. TAIR10
Match: AT5G53350.1 (AT5G53350.1 CLP protease regulatory subunit X)

HSP 1 Score: 658.7 bits (1698), Expect = 3.2e-189
Identity = 378/587 (64.40%), Postives = 434/587 (73.94%), Query Frame = 1 

Query: 3   AAALRSRSSKEVSSFTVSRSRHSISNYIHAASNPNS--HCTSRKKSNDLYLNSPYHLVSF 62
           AAALRS +S+E +S T+S  R+ I N IH A    S  HC  R KS++ +   PY     
Sbjct: 2   AAALRSNTSRETASLTLSHFRYFIFNRIHTARTATSPPHCNHRSKSDEKF---PY----- 61

Query: 63  KPVSLGGDFIQNRS--QPSDHRRIYRNYNKNLYEKLGRGGCFMSTYGDPPEVWS--GDGI 122
           K  SLG  F+ NR   +  +  + Y    K     +G     +S+ GDPP++W   GDG+
Sbjct: 62  KISSLGTSFLDNRGGGERRNSTKCYAAQKK--LSGVGSSVVILSSQGDPPDLWQPPGDGV 121

Query: 123 VIR--GSNPNLNGRGGGGGSSNSGSGGEFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKF 182
            +R  GS+ NL   GGGGGSS  G G   GSNS + CWGGS+LG +FPTPKEI KGL+KF
Sbjct: 122 SVRVNGSSVNLGRGGGGGGSSPGGPGNGTGSNSKEDCWGGSNLGSDFPTPKEICKGLNKF 181

Query: 183 VIGQERAKKVLSVGVYNHYKRIYHESLQ-RPTGDTVDNKADAVDDDKVELEKSNILLMGP 242
           VIGQERAKKVLSV VYNHYKRIYHES Q R  G+T    A   DDD VELEKSNILLMGP
Sbjct: 182 VIGQERAKKVLSVAVYNHYKRIYHESSQKRSAGETDSTAAKPADDDMVELEKSNILLMGP 241

Query: 243 TGSG----------------------------YVGEDVESILYKLLMAADYNVAAAQQGI 302
           TGSG                            YVGEDVESILYKLL  ADYNVAAAQQGI
Sbjct: 242 TGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGI 301

Query: 303 VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQINT 362
           VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRG+NIQI+T
Sbjct: 302 VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDT 361

Query: 363 KDILFICGGAFIDLEKTISDRRQDSSLGFGAPVRANMRTGGVTDAIVTSSLLETVESSDL 422
           KDILFICGGAF+D+EKTIS+RR DSS+GFGAPVRANMR GGVT+A V S+L+ETVESSDL
Sbjct: 362 KDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANMRAGGVTNAAVASNLMETVESSDL 421

Query: 423 IAYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHFIENAL 482
           IAYGLIPEFVGRFP+LVSLSALTENQL+QVLTEPKNALGKQY+KM+QMN VKLHF E+AL
Sbjct: 422 IAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKMYQMNSVKLHFTESAL 481

Query: 483 RLIARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESI-GSNSPGS 542
           RLIARKA++KNTGARGLR++LE++LMD+MYEIPD  TG D+I+AV+VDEE++ G    GS
Sbjct: 482 RLIARKAITKNTGARGLRALLESILMDSMYEIPDEGTGSDMIEAVVVDEEAVEGEGRRGS 541

Query: 543 GAKILYGQGAFDRYL-------SGQKATRVREPEPEGDTDLPSVVAS 545
           GAKIL G+GA  RYL       S Q      + E E + ++PSVVAS
Sbjct: 542 GAKILRGKGALARYLSETNSKDSPQTTKEGSDGETEVEAEIPSVVAS 578

[Close]
BLAST of Cp4.1LG14g06870 vs. TAIR10
Match: AT1G33360.1 (AT1G33360.1 ATP-dependent Clp protease)

HSP 1 Score: 535.0 bits (1377), Expect = 5.3e-152
Identity = 283/409 (69.19%), Postives = 326/409 (79.71%), Query Frame = 1 

Query: 152 WGGSSLGPNFPTPKEISKGLDKFVIGQERAKKVLSVGVYNHYKRIYHESLQRPTG-DTVD 211
           WGG+ LG +FPTPKEI K LDKFVIGQ RAKKVLSV VYNHYKRIYH S+++ +    +D
Sbjct: 240 WGGAGLGRDFPTPKEICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKKGSAAQPID 299

Query: 212 NKADAVDDDKVELEKSNILLMGPTGSG----------------------------YVGED 271
                 DDD VEL+KSN+LLMGPTGSG                            YVG+D
Sbjct: 300 ------DDDNVELDKSNVLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDD 359

Query: 272 VESILYKLLMAADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 331
           VESIL+KLL  A++NV AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK+LEG
Sbjct: 360 VESILHKLLTVAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKLLEG 419

Query: 332 TIVNVPEKGARKHPRGENIQINTKDILFICGGAFIDLEKTISDRRQDSSLGFGAPVRANM 391
           TIVNVP KGARKHPRG++IQI+TKDILFICGGAF+DLEKTI DRRQDSS+GFGAPVRANM
Sbjct: 420 TIVNVPGKGARKHPRGDHIQIDTKDILFICGGAFVDLEKTIVDRRQDSSIGFGAPVRANM 479

Query: 392 RTGGVTDAIVTSSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNA 451
            T GVT   +TSSLLE+VES+DL AYGLIPEFVGRFPILVSLSALTE+QL++VL EPKNA
Sbjct: 480 ATSGVTSGAITSSLLESVESADLTAYGLIPEFVGRFPILVSLSALTEDQLIRVLVEPKNA 539

Query: 452 LGKQYRKMFQMNDVKLHFIENALRLIARKAMSKNTGARGLRSILENLLMDAMYEIPDVRT 511
           LGKQY+K+F MN+VKLHF E AL +I+++AM KNTGARGLR++LE++L +AM+EIPD + 
Sbjct: 540 LGKQYKKLFSMNNVKLHFTEKALEIISKQAMVKNTGARGLRALLESILTEAMFEIPDDKK 599

Query: 512 GEDIIDAVIVDEESIGSN-SPGSGAKILYGQGAFDRYLSGQKATRVREP 531
           G++ IDAVIVDEES  S  S G  AKIL G GAF+RYLS  K+    EP
Sbjct: 600 GDERIDAVIVDEESTSSEASRGCTAKILRGDGAFERYLSENKSKDATEP 642

[Close]
BLAST of Cp4.1LG14g06870 vs. TAIR10
Match: AT5G49840.1 (AT5G49840.1 ATP-dependent Clp protease)

HSP 1 Score: 382.9 bits (982), Expect = 3.4e-106
Identity = 198/290 (68.28%), Postives = 242/290 (83.45%), Query Frame = 1 

Query: 234 TGSGYVGEDVESILYKLLMAADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQ 293
           T + YVGEDVESILYKL + A  NV  AQ+GIVYIDEVDK+T K+ S N  RDVSGEGVQ
Sbjct: 299 TQASYVGEDVESILYKLYVEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQ 358

Query: 294 QALLKMLEGTIVNVP--EKGARKHPRGENIQINTKDILFICGGAFIDLEKTISDRRQDSS 353
           Q+LLK+LEGT+V+VP  EKG R+ PRG++IQ++TKDILFICGGAFIDLEKT+S+R+ D+S
Sbjct: 359 QSLLKLLEGTVVSVPIPEKGLRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDAS 418

Query: 354 LGFGAPVRANMRTGGVTDAIVTSSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQ 413
           +GFGA VR NM T G++ A VTSSLLE+++S DL+AYGLIPEFVGR PILVSLSAL E+Q
Sbjct: 419 IGFGASVRTNMSTSGLSSAAVTSSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQ 478

Query: 414 LVQVLTEPKNALGKQYRKMFQMNDVKLHFIENALRLIARKAMSKNTGARGLRSILENLLM 473
           LVQVLTEPK+ALGKQY+K+F+MN+V+L F E A RLIARKAMSKNTGARGLRSILE++L 
Sbjct: 479 LVQVLTEPKSALGKQYKKLFRMNNVQLQFTEGATRLIARKAMSKNTGARGLRSILESILT 538

Query: 474 DAMYEIPD-VRTGEDIIDAVIVDEESIGS-NSPGSGAKILYGQGAFDRYL 520
           +AM+E+PD +  G   I AV+VDEE++GS  SPG GAKIL G     +++
Sbjct: 539 EAMFEVPDSITEGSQSIKAVLVDEEAVGSVGSPGCGAKILKGDNVLQQFV 588

[Close]
BLAST of Cp4.1LG14g06870 vs. NCBI nr
Match: gi|659133628|ref|XP_008466827.1| (PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 907.1 bits (2343), Expect = 1.5e-260
Identity = 480/576 (83.33%), Postives = 506/576 (87.85%), Query Frame = 1 

Query: 2   AAAALRSRSSKEVSSFTVSRSRHSISNYIHAASNPNSHCTSRKKSNDLYLNSPYHLVSFK 61
           AAAALRSRSSKEV++ T+SR RH ISN IHAA +P       KKSND +LNSPYHLVSFK
Sbjct: 3   AAAALRSRSSKEVATLTLSRCRHCISNSIHAAFSP-------KKSNDCFLNSPYHLVSFK 62

Query: 62  PVSLGGDFIQNRSQPSDHRRIYRNYNKNLYEKLGRGGCFMSTYGDPPEVWSGDGIVIRGS 121
           PVSL GDF  + +QP DHRRIY+N  K+L  +L + GCFMSTYGDPPEVWSGDGIVIRGS
Sbjct: 63  PVSLRGDFFDSGTQPLDHRRIYQNSTKSLNHRLSKKGCFMSTYGDPPEVWSGDGIVIRGS 122

Query: 122 NPNLNGRGGGGGSSNSGSGGEFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKFVIGQERA 181
           N +LNGRGG GGSSN GSGG FGSNSNDGCWGGSSLGPNFPTPKEI+KGLDKFVIGQ+RA
Sbjct: 123 NSSLNGRGGDGGSSNPGSGGGFGSNSNDGCWGGSSLGPNFPTPKEIAKGLDKFVIGQDRA 182

Query: 182 KKVLSVGVYNHYKRIYHESLQRPTGDTVDNKADAVDDDKVELEKSNILLMGPTGSG---- 241
           KKVLSVGVYNHYKRIYHESLQRPTGD  +NKADA DDDKVELEKSNILLMGPTGSG    
Sbjct: 183 KKVLSVGVYNHYKRIYHESLQRPTGDAFNNKADAADDDKVELEKSNILLMGPTGSGKTLL 242

Query: 242 ------------------------YVGEDVESILYKLLMAADYNVAAAQQGIVYIDEVDK 301
                                   YVGEDVESILYKLLM ADYNVAAAQQGIVYIDEVDK
Sbjct: 243 AKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDK 302

Query: 302 ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQINTKDILFICG 361
           ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQI+TKDILFICG
Sbjct: 303 ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILFICG 362

Query: 362 GAFIDLEKTISDRRQDSSLGFGAPVRANMRTGGVTDAIVTSSLLETVESSDLIAYGLIPE 421
           GAFIDLEKTIS+RRQDSSLGFGAPVRANMR GGVTDA+VTSSLLETVESSDLIAYGLIPE
Sbjct: 363 GAFIDLEKTISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLIAYGLIPE 422

Query: 422 FVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHFIENALRLIARKAM 481
           FVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHF ENALRLIARKAM
Sbjct: 423 FVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHFTENALRLIARKAM 482

Query: 482 SKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESIGSNSPGSGAKILYGQG 541
           SKNTGARGLRSILENLLMD+MYEIPD+RTG+DIIDAV+VDEES+GS+SPG GAKILYG+G
Sbjct: 483 SKNTGARGLRSILENLLMDSMYEIPDIRTGKDIIDAVVVDEESVGSDSPGFGAKILYGKG 542

Query: 542 AFDRYLSGQKAT---RVREPEPEGDTDLPSVVASSM 547
           A DRYLSGQKAT     REPEPEG+TDLPSVVAS M
Sbjct: 543 ALDRYLSGQKATSQDSEREPEPEGETDLPSVVASGM 571

[Close]
BLAST of Cp4.1LG14g06870 vs. NCBI nr
Match: gi|449456973|ref|XP_004146223.1| (PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial [Cucumis sativus])

HSP 1 Score: 906.4 bits (2341), Expect = 2.5e-260
Identity = 482/576 (83.68%), Postives = 505/576 (87.67%), Query Frame = 1 

Query: 2   AAAALRSRSSKEVSSFTVSRSRHSISNYIHAASNPNSHCTSRKKSNDLYLNSPYHLVSFK 61
           AAAALRSRSSKEV++ T+SR RH ISN IHAA  PN       KSND +LNSPYHLVSFK
Sbjct: 3   AAAALRSRSSKEVATLTLSRCRHCISNSIHAAFTPN-------KSNDCFLNSPYHLVSFK 62

Query: 62  PVSLGGDFIQNRSQPSDHRRIYRNYNKNLYEKLGRGGCFMSTYGDPPEVWSGDGIVIRGS 121
           PVSL GDF    +QP DHRRIY++  K L  +L + GCFMSTYGDPPEVWSGDGIVIRGS
Sbjct: 63  PVSLRGDFFDTGTQPLDHRRIYQSPTKTLNHRLSKKGCFMSTYGDPPEVWSGDGIVIRGS 122

Query: 122 NPNLNGRGGGGGSSNSGSGGEFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKFVIGQERA 181
           N +LNGRGG GGSSNSGSGG FGSNSNDGCWGGSSLGPNFPTPKEI+KGLDKFVIGQERA
Sbjct: 123 NSSLNGRGGDGGSSNSGSGGGFGSNSNDGCWGGSSLGPNFPTPKEIAKGLDKFVIGQERA 182

Query: 182 KKVLSVGVYNHYKRIYHESLQRPTGDTVDNKADAVDDDKVELEKSNILLMGPTGSG---- 241
           KKVLSVGVYNHYKRIYHESLQRPTGDT +NKADA DDDKVELEKSNILLMGPTGSG    
Sbjct: 183 KKVLSVGVYNHYKRIYHESLQRPTGDTFNNKADAADDDKVELEKSNILLMGPTGSGKTLL 242

Query: 242 ------------------------YVGEDVESILYKLLMAADYNVAAAQQGIVYIDEVDK 301
                                   YVGEDVESILYKLLM ADYNVAAAQQGIVYIDEVDK
Sbjct: 243 AKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDK 302

Query: 302 ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQINTKDILFICG 361
           ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQI+TKDILFICG
Sbjct: 303 ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILFICG 362

Query: 362 GAFIDLEKTISDRRQDSSLGFGAPVRANMRTGGVTDAIVTSSLLETVESSDLIAYGLIPE 421
           GAFIDLEKTIS+RRQDSSLGFGAPVRANMR GGVTDA+VTSSLLETVESSDLIAYGLIPE
Sbjct: 363 GAFIDLEKTISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLIAYGLIPE 422

Query: 422 FVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHFIENALRLIARKAM 481
           FVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHF EN+LRLIARKAM
Sbjct: 423 FVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHFTENSLRLIARKAM 482

Query: 482 SKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESIGSNSPGSGAKILYGQG 541
           SKNTGARGLRSILENLLMD+MYEIPDVRTG+DIIDAVIVDEES+GS+SPG GAKILYG+G
Sbjct: 483 SKNTGARGLRSILENLLMDSMYEIPDVRTGKDIIDAVIVDEESVGSDSPGFGAKILYGKG 542

Query: 542 AFDRYLSGQKAT---RVREPEPEGDTDLPSVVASSM 547
           A DR+LSGQKAT     REPEPEG+TDLPSVVAS M
Sbjct: 543 ALDRHLSGQKATSQDSEREPEPEGETDLPSVVASGM 571

[Close]
BLAST of Cp4.1LG14g06870 vs. NCBI nr
Match: gi|659133626|ref|XP_008466826.1| (PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 901.4 bits (2328), Expect = 8.0e-259
Identity = 478/581 (82.27%), Postives = 504/581 (86.75%), Query Frame = 1 

Query: 2   AAAALRSRSSKEVSSFTVSRSRHSISNYIHAASNPNSHCTSRKKSNDLYLNSPYHLVSFK 61
           AAAALRSRSSKEV++ T+SR RH ISN IHAA +P       KKSND +LNSPYHLVSFK
Sbjct: 3   AAAALRSRSSKEVATLTLSRCRHCISNSIHAAFSP-------KKSNDCFLNSPYHLVSFK 62

Query: 62  PVSLGGDFIQNRSQPSDHRRIYRNYNKNLYEKLGRGGCFMSTYGDPPEVWSGDGIVIRGS 121
           PVSL GDF  + +QP DHRRIY+N  K+L  +L + GCFMSTYGDPPEVWSGDGIVIRGS
Sbjct: 63  PVSLRGDFFDSGTQPLDHRRIYQNSTKSLNHRLSKKGCFMSTYGDPPEVWSGDGIVIRGS 122

Query: 122 NPNLNGRGGGGGSSNSGSGGEFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKFVIGQERA 181
           N +LNGRGG GGSSN GSGG FGSNSNDGCWGGSSLGPNFPTPKEI+KGLDKFVIGQ+RA
Sbjct: 123 NSSLNGRGGDGGSSNPGSGGGFGSNSNDGCWGGSSLGPNFPTPKEIAKGLDKFVIGQDRA 182

Query: 182 KKVLSVGVYNHYKRIYHESLQRPTGDTVDNKADAVDDDKVELEKSNILLMGPTGSG---- 241
           KKVLSVGVYNHYKRIYHESLQRPTGD  +NKADA DDDKVELEKSNILLMGPTGSG    
Sbjct: 183 KKVLSVGVYNHYKRIYHESLQRPTGDAFNNKADAADDDKVELEKSNILLMGPTGSGKTLL 242

Query: 242 ------------------------YVGEDVESILYKLLMAADYNVAAAQQGIVYIDEVDK 301
                                   YVGEDVESILYKLLM ADYNVAAAQQGIVYIDEVDK
Sbjct: 243 AKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDK 302

Query: 302 ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQINTKDILFICG 361
           ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQI+TKDILFICG
Sbjct: 303 ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILFICG 362

Query: 362 GAFIDLEKTISDRRQDSSLGFGAPVRANMRTGGVTDAIVTSSLLETVESSDLIAYGLIPE 421
           GAFIDLEKTIS+RRQDSSLGFGAPVRANMR GGVTDA+VTSSLLETVESSDLIAYGLIPE
Sbjct: 363 GAFIDLEKTISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLIAYGLIPE 422

Query: 422 FVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHFIENALRLIARKAM 481
           FVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHF ENALRLIARKAM
Sbjct: 423 FVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHFTENALRLIARKAM 482

Query: 482 SKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESIGSNSPGSGAKILYGQG 541
           SKNTGARGLRSILENLLMD+MYEIPD+RTG+DIIDAV+VDEES+GS+SPG GAKILYG+G
Sbjct: 483 SKNTGARGLRSILENLLMDSMYEIPDIRTGKDIIDAVVVDEESVGSDSPGFGAKILYGKG 542

Query: 542 AFDRYLSGQKA--------TRVREPEPEGDTDLPSVVASSM 547
           A DRYLSGQK            REPEPEG+TDLPSVVAS M
Sbjct: 543 ALDRYLSGQKVEDRKATSQDSEREPEPEGETDLPSVVASGM 576

[Close]
BLAST of Cp4.1LG14g06870 vs. NCBI nr
Match: gi|645258150|ref|XP_008234752.1| (PREDICTED: mitochondrial clpX-like chaperone MCX1 [Prunus mume])

HSP 1 Score: 766.9 bits (1979), Expect = 2.3e-218
Identity = 419/586 (71.50%), Postives = 468/586 (79.86%), Query Frame = 1 

Query: 3   AAALRSRSSKEVSSFTVSRSRHSISNYIHAASNPNSHCTSRKKSNDLYLNSPYHLVSFKP 62
           AAALRS+ S++  S TVS+ R+ + NY+HA    NSH   R K+ DL++N+PYH  SFKP
Sbjct: 2   AAALRSKPSRDTVSSTVSQFRYFVFNYMHAGRVVNSHYAHRIKNEDLFMNTPYHFTSFKP 61

Query: 63  VSLGGDFIQNRSQPSDHRRIYRNYNKNLYEKLGRGGC------FMSTYGDPPEVWSGDGI 122
           V+LGG+F++  SQ  D  R+ +  +KN     GR  C       +S+ GDPPEVWSGDGI
Sbjct: 62  VALGGNFVEKGSQIFDRPRVAQKTSKNSDRNWGRKLCSSRCNSVLSSQGDPPEVWSGDGI 121

Query: 123 VIR-GSNPNLNGRGGGGGSSNSGSGGEFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKFV 182
           V+R G + NL   GGGGG  + GSGG F SNS D CWGGSSLG NFPTPKEI KGLDKFV
Sbjct: 122 VVRAGPSSNLVRGGGGGGGPSPGSGGGFESNSKDECWGGSSLGNNFPTPKEICKGLDKFV 181

Query: 183 IGQERAKKVLSVGVYNHYKRIYHESLQR-PTGDTVDNKADAVDDDKVELEKSNILLMGPT 242
           IGQE+AKKVLSV VYNHYKRIYHESLQ+   GD+ ++K DA+DDD+VELEKSNILLMGPT
Sbjct: 182 IGQEQAKKVLSVAVYNHYKRIYHESLQKWSAGDSGNSKVDAMDDDRVELEKSNILLMGPT 241

Query: 243 GSG----------------------------YVGEDVESILYKLLMAADYNVAAAQQGIV 302
           GSG                            YVGEDVESILYKLL  ADYNVAAAQQGIV
Sbjct: 242 GSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIV 301

Query: 303 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQINTK 362
           YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQI+TK
Sbjct: 302 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTK 361

Query: 363 DILFICGGAFIDLEKTISDRRQDSSLGFGAPVRANMRTGGVTDAIVTSSLLETVESSDLI 422
           DILFICGGAFIDLEKTIS+RRQDSS+GFGAPVRANMRTGGVTDA VTSSLLETVESSDLI
Sbjct: 362 DILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGVTDAAVTSSLLETVESSDLI 421

Query: 423 AYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHFIENALR 482
            YGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQY+KMF+MN VKLHF E+ALR
Sbjct: 422 RYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYKKMFRMNGVKLHFTESALR 481

Query: 483 LIARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESIGSNSPGSGA 542
           LIARKA+SKNTGARGLR+ILEN+LMDAMYEIPDVR G+DIIDAV++DEE++GS + GSGA
Sbjct: 482 LIARKAISKNTGARGLRAILENILMDAMYEIPDVRAGDDIIDAVVIDEEAVGSEAQGSGA 541

Query: 543 KILYGQGAFDRYLSGQKATRVR--------EPEPEGDTDLPSVVAS 545
           KILYG+GA D YLS  KA  V         + EPE +T+L SVVAS
Sbjct: 542 KILYGKGALDHYLSRNKAKEVETATTEGSSDGEPEVETELSSVVAS 587

[Close]
BLAST of Cp4.1LG14g06870 vs. NCBI nr
Match: gi|596016867|ref|XP_007218873.1| (hypothetical protein PRUPE_ppa003261mg [Prunus persica])

HSP 1 Score: 765.8 bits (1976), Expect = 5.2e-218
Identity = 418/586 (71.33%), Postives = 467/586 (79.69%), Query Frame = 1 

Query: 3   AAALRSRSSKEVSSFTVSRSRHSISNYIHAASNPNSHCTSRKKSNDLYLNSPYHLVSFKP 62
           AAALRS+ S++  S TVS+ R+ + NY+HA    NSH   R K+ DL++N+PYH  SFKP
Sbjct: 2   AAALRSKPSRDTVSSTVSQFRYFVFNYLHAGRVVNSHYAHRTKNEDLFMNTPYHFTSFKP 61

Query: 63  VSLGGDFIQNRSQPSDHRRIYRNYNKNLYEKLGRGGC------FMSTYGDPPEVWSGDGI 122
           V+LGG+F++  SQ  D  R+ +  +KN     GR  C       +S+ GDPPEVWSGDGI
Sbjct: 62  VALGGNFVEKGSQIFDRPRVAQKTSKNSDRNWGRKLCSSRCNSVLSSQGDPPEVWSGDGI 121

Query: 123 VIR-GSNPNLNGRGGGGGSSNSGSGGEFGSNSNDGCWGGSSLGPNFPTPKEISKGLDKFV 182
           V+R G + NL    GGGG  + GSGG F SNS D CWGGSSLG NFPTPKEI KGLDKFV
Sbjct: 122 VVRAGPSSNLVRGSGGGGGPSPGSGGGFESNSKDECWGGSSLGNNFPTPKEICKGLDKFV 181

Query: 183 IGQERAKKVLSVGVYNHYKRIYHESLQR-PTGDTVDNKADAVDDDKVELEKSNILLMGPT 242
           IGQE+AKKVLSV VYNHYKRIYHESLQ+   GD+ ++K DA+DDD+VELEKSNILLMGPT
Sbjct: 182 IGQEQAKKVLSVAVYNHYKRIYHESLQKWSAGDSGNSKVDAMDDDRVELEKSNILLMGPT 241

Query: 243 GSG----------------------------YVGEDVESILYKLLMAADYNVAAAQQGIV 302
           GSG                            YVGEDVESILYKLL  ADYNVAAAQQGIV
Sbjct: 242 GSGKTLLAKTLARFVNVPFVIADATTLTQERYVGEDVESILYKLLTVADYNVAAAQQGIV 301

Query: 303 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQINTK 362
           YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQI+TK
Sbjct: 302 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTK 361

Query: 363 DILFICGGAFIDLEKTISDRRQDSSLGFGAPVRANMRTGGVTDAIVTSSLLETVESSDLI 422
           DILFICGGAFIDLEKTIS+RRQDSS+GFGAPVRANMRTGGVTDA VTSSLLETVESSDLI
Sbjct: 362 DILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGVTDAAVTSSLLETVESSDLI 421

Query: 423 AYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHFIENALR 482
            YGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQY+KMF+MN VKLHF E+ALR
Sbjct: 422 RYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYKKMFRMNGVKLHFTESALR 481

Query: 483 LIARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIVDEESIGSNSPGSGA 542
           LIARKA+SKNTGARGLR+ILEN+LMDAMYEIPDVR G+DIIDAV++DEE++GS + GSGA
Sbjct: 482 LIARKAISKNTGARGLRAILENILMDAMYEIPDVRAGDDIIDAVVIDEEAVGSEAQGSGA 541

Query: 543 KILYGQGAFDRYLSGQKATRVR--------EPEPEGDTDLPSVVAS 545
           KILYG+GA D YLS  KA  V         + EPE +T+L SVVAS
Sbjct: 542 KILYGKGALDHYLSQNKAKEVETATTEGSSDGEPEVETELSSVVAS 587

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g06870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CLPX1_ARATH5.6e-18864.40CLP protease regulatory subunit CLPX1, mitochondrial OS=Arabidopsis thaliana GN=... [more]
CLPX3_ARATH9.4e-15169.19CLP protease regulatory subunit CLPX3, mitochondrial OS=Arabidopsis thaliana GN=... [more]
CLPX2_ARATH6.0e-10568.28CLP protease regulatory subunit CLPX2, mitochondrial OS=Arabidopsis thaliana GN=... [more]
CLPX_RHIME4.0e-9350.67ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhizobium meliloti (strai... [more]
CLPX_SINMW1.2e-9250.40ATP-dependent Clp protease ATP-binding subunit ClpX OS=Sinorhizobium medicae (st... [more]
BLAST of Cp4.1LG14g06870 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GBA0_CUCME1.0e-26083.33ATP-dependent clp protease ATP-binding subunit clpx OS=Cucumis melo subsp. melo ... [more]
A0A0A0L6R6_CUCSA1.7e-26083.68Uncharacterized protein OS=Cucumis sativus GN=Csa_3G239830 PE=4 SV=1[more]
M5X1W5_PRUPE3.6e-21871.33Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003261mg PE=4 SV=1[more]
A0A061G2X2_THECC3.5e-21370.27CLP protease regulatory subunit X isoform 1 OS=Theobroma cacao GN=TCM_015415 PE=... [more]
E0CV48_VITVI9.9e-20868.78Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g01860 PE=4 SV=... [more]
BLAST of Cp4.1LG14g06870 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G53350.13.2e-18964.40 CLP protease regulatory subunit X[more]
AT1G33360.15.3e-15269.19 ATP-dependent Clp protease[more]
AT5G49840.13.4e-10668.28 ATP-dependent Clp protease[more]
BLAST of Cp4.1LG14g06870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659133628|ref|XP_008466827.1|1.5e-26083.33PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondri... [more]
gi|449456973|ref|XP_004146223.1|2.5e-26083.68PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondri... [more]
gi|659133626|ref|XP_008466826.1|8.0e-25982.27PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondri... [more]
gi|645258150|ref|XP_008234752.1|2.3e-21871.50PREDICTED: mitochondrial clpX-like chaperone MCX1 [Prunus mume][more]
gi|596016867|ref|XP_007218873.1|5.2e-21871.33hypothetical protein PRUPE_ppa003261mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR019489Clp_ATPase_C
IPR003959ATPase_AAA_core
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:0006457 protein folding
biological_process GO:0006508 proteolysis
biological_process GO:0007275 multicellular organism development
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0008233 peptidase activity
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016874 ligase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g06870.1Cp4.1LG14g06870.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003959ATPase, AAA-type, corePFAMPF07724AAA_2coord: 240..400
score: 5.7
IPR019489Clp ATPase, C-terminalPFAMPF10431ClpB_D2-smallcoord: 407..477
score: 8.5
IPR019489Clp ATPase, C-terminalSMARTSM01086ClpB_D2_small_2coord: 407..497
score: 2.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 384..402
score: 7.9E-20coord: 238..338
score: 7.9E-20coord: 162..237
score: 1.
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 161..493
score: 1.82
NoneNo IPR availableGENE3DG3DSA:1.10.8.60coord: 406..495
score: 7.2
NoneNo IPR availablePANTHERPTHR11262HSL AND CLP PROTEASEcoord: 100..543
score: 3.0E
NoneNo IPR availablePANTHERPTHR11262:SF11ATP-DEPENDENT CLP PROTEASE REGULATORY SUBUNIT CLPXcoord: 100..543
score: 3.0E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG14g06870Cucsa.032150Cucumber (Gy14) v1cgycpeB0006
Cp4.1LG14g06870CmaCh16G000470Cucurbita maxima (Rimu)cmacpeB344
Cp4.1LG14g06870CmaCh18G013320Cucurbita maxima (Rimu)cmacpeB424
Cp4.1LG14g06870CmoCh18G013590Cucurbita moschata (Rifu)cmocpeB385
Cp4.1LG14g06870CmoCh16G000550Cucurbita moschata (Rifu)cmocpeB307
Cp4.1LG14g06870Cla004257Watermelon (97103) v1cpewmB227
Cp4.1LG14g06870Csa3G239830Cucumber (Chinese Long) v2cpecuB206
Cp4.1LG14g06870MELO3C008495Melon (DHL92) v3.5.1cpemeB193
Cp4.1LG14g06870ClCG05G008940Watermelon (Charleston Gray)cpewcgB207
Cp4.1LG14g06870CSPI03G19810Wild cucumber (PI 183967)cpecpiB209
Cp4.1LG14g06870Lsi05G001030Bottle gourd (USVL1VR-Ls)cpelsiB178
Cp4.1LG14g06870MELO3C008495.2Melon (DHL92) v3.6.1cpemedB236
Cp4.1LG14g06870CsaV3_3G019880Cucumber (Chinese Long) v3cpecucB0248
Cp4.1LG14g06870Bhi01G001117Wax gourdcpewgoB0296
Cp4.1LG14g06870CsGy3G019710Cucumber (Gy14) v2cgybcpeB318
Cp4.1LG14g06870Carg15062Silver-seed gourdcarcpeB1376
Cp4.1LG14g06870Carg20325Silver-seed gourdcarcpeB0762
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG14g06870Cp4.1LG09g00310Cucurbita pepo (Zucchini)cpecpeB023
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG14g06870Melon (DHL92) v3.6.1cpemedB215
Cp4.1LG14g06870Silver-seed gourdcarcpeB0714
Cp4.1LG14g06870Silver-seed gourdcarcpeB0761
Cp4.1LG14g06870Cucumber (Chinese Long) v3cpecucB0275
Cp4.1LG14g06870Wax gourdcpewgoB0285
Cp4.1LG14g06870Cucurbita pepo (Zucchini)cpecpeB197
Cp4.1LG14g06870Cucurbita pepo (Zucchini)cpecpeB245
Cp4.1LG14g06870Cucumber (Gy14) v1cgycpeB0573
Cp4.1LG14g06870Cucurbita maxima (Rimu)cmacpeB307
Cp4.1LG14g06870Cucurbita maxima (Rimu)cmacpeB425
Cp4.1LG14g06870Cucurbita maxima (Rimu)cmacpeB608
Cp4.1LG14g06870Cucurbita moschata (Rifu)cmocpeB270
Cp4.1LG14g06870Cucurbita moschata (Rifu)cmocpeB386
Cp4.1LG14g06870Cucurbita moschata (Rifu)cmocpeB557
Cp4.1LG14g06870Wild cucumber (PI 183967)cpecpiB227
Cp4.1LG14g06870Cucumber (Chinese Long) v2cpecuB225
Cp4.1LG14g06870Bottle gourd (USVL1VR-Ls)cpelsiB163
Cp4.1LG14g06870Watermelon (Charleston Gray)cpewcgB199
Cp4.1LG14g06870Watermelon (97103) v1cpewmB229
Cp4.1LG14g06870Melon (DHL92) v3.5.1cpemeB179
Cp4.1LG14g06870Cucumber (Gy14) v2cgybcpeB617