Cp4.1LG14g05940 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG14g05940
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionC-repeat binding factor
LocationCp4.1LG14 : 693943 .. 694578 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCTTTTTCAACTTTTTATGAAGACTACTTCTCCAGCTCCGAGAGTAGTACTTGCCGGCGGTCCATATTTTCCGACAAGGAGCTTATGTTAGCGGCGAGCAATCCCAAGAAGAGGGCCGGTAGGAAGAAGTTTAAGGAGACAAGGCACCCTGTTTACAGAGGCGTCAGGAGGAGGAACTCCGGCAAGTGGGTCTGTGAAGTGAGAGAGCCTAATAAAAAGTCAAGGATCTGGCTTGGCACTTTTCCGACGGCGGAGATGGCGGCTCGGGCTCACGATGTCGCTGCCATGAAGCTTCGAGGTCGCTCTGCTTGTCTCAATTTTGCCGATTCTGCGTGGCGGCTGCCGGAGCCGGCATCTGCTGACGCCAGGGATATTCAGAAGGCGGCGGCGGAGGCGGCGGAGGCATTCCGGCCTGCAGAATCAGATGGGTCTTCTGTTGATGACTCAAGGACGGAAAATATGATGACGGCGGAGACGACGCCAGAAAACGTGTTGTACGTGGATGATGATGCAATTTTTGGGCTGCCGGGATTGTTGGAGGATATGGCTGCAGGGATGATGTTGCCTCCACCTCAGCATTTTCGTGATGACATGGATTTTTATTCTGACGTGTCATTATGGAGCTACTAA

mRNA sequence

ATGGAATCTTTTTCAACTTTTTATGAAGACTACTTCTCCAGCTCCGAGAGTAGTACTTGCCGGCGGTCCATATTTTCCGACAAGGAGCTTATGGATATTCAGAAGGCGGCGGCGGAGGCGGCGGAGGCATTCCGGCCTGCAGAATCAGATGGGTCTTCTGTTGATGACTCAAGGACGGAAAATATGATGACGGCGGAGACGACGCCAGAAAACGTGTTGTACGTGGATGATGATGCAATTTTTGGGCTGCCGGGATTGTTGGAGGATATGGCTGCAGGGATGATGTTGCCTCCACCTCAGCATTTTCGTGATGACATGGATTTTTATTCTGACGTGTCATTATGGAGCTACTAA

Coding sequence (CDS)

ATGGAATCTTTTTCAACTTTTTATGAAGACTACTTCTCCAGCTCCGAGAGTAGTACTTGCCGGCGGTCCATATTTTCCGACAAGGAGCTTATGGATATTCAGAAGGCGGCGGCGGAGGCGGCGGAGGCATTCCGGCCTGCAGAATCAGATGGGTCTTCTGTTGATGACTCAAGGACGGAAAATATGATGACGGCGGAGACGACGCCAGAAAACGTGTTGTACGTGGATGATGATGCAATTTTTGGGCTGCCGGGATTGTTGGAGGATATGGCTGCAGGGATGATGTTGCCTCCACCTCAGCATTTTCGTGATGACATGGATTTTTATTCTGACGTGTCATTATGGAGCTACTAA

Protein sequence

MESFSTFYEDYFSSSESSTCRRSIFSDKELMDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Homology
[Close]
BLAST of Cp4.1LG14g05940 vs. Swiss-Prot
Match: DRE1B_ARATH (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana GN=DREB1B PE=2 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10
Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 1 

Query: 32  DIQKAAAEAAEAFRPAESDGSSVDDS--RTENMMTAETTPEN---VLYVDDDAIFGLPGL 91
           DIQKAAAEAA AF+    D ++ +      E M+ A  TPE      Y+D++ +FG+P L
Sbjct: 120 DIQKAAAEAALAFQDETCDTTTTNHGLDMEETMVEAIYTPEQSEGAFYMDEETMFGMPTL 179

Query: 92  LEDMAAGMMLPPPQ---HFRDDMDFYSDVSLWSY 118
           L++MA GM+LPPP    +   D +   DVSLWSY
Sbjct: 180 LDNMAEGMLLPPPSVQWNHNYDGEGDGDVSLWSY 213

[Close]
BLAST of Cp4.1LG14g05940 vs. Swiss-Prot
Match: DRE1A_ARATH (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana GN=DREB1A PE=1 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 1.7e-09
Identity = 44/97 (45.36%), Postives = 57/97 (58.76%), Query Frame = 1 

Query: 32  DIQKAAAEAAEAFRPAESD-----GSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL 91
           DIQKAAAEAA AF+    D     G  ++++  E + TAE + EN  Y+ D+A+F +P L
Sbjct: 123 DIQKAAAEAALAFQDEMCDATTDHGFDMEETLVEAIYTAEQS-ENAFYMHDEAMFEMPSL 182

Query: 92  LEDMAAGMMLPPP------QHFRDDMDFYSDVSLWSY 118
           L +MA GM+LP P       H  D  D   DVSLWSY
Sbjct: 183 LANMAEGMLLPLPSVQWNHNHEVDGDD--DDVSLWSY 216

[Close]
BLAST of Cp4.1LG14g05940 vs. Swiss-Prot
Match: DRE1D_ARATH (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana GN=DREB1D PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.2e-09
Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 1 

Query: 32  DIQKAAAEAAEAFR----------PAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIF 91
           +IQKAA+EAA AF+           AE++ ++ +  R E    AE     V Y+DD+A+ 
Sbjct: 126 EIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVR-EGERRAEEQNGGVFYMDDEALL 185

Query: 92  GLPGLLEDMAAGMMLPPPQ--HFRDDMDFYSDVSLWSY 118
           G+P   E+MA GM+LPPP+     +D D   DVSLWS+
Sbjct: 186 GMPNFFENMAEGMLLPPPEVGWNHNDFDGVGDVSLWSF 222

[Close]
BLAST of Cp4.1LG14g05940 vs. Swiss-Prot
Match: DRE1F_ORYSI (Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. indica GN=DREB1F PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.1e-07
Identity = 36/97 (37.11%), Postives = 51/97 (52.58%), Query Frame = 1 

Query: 32  DIQKAAAEAAEAFR---PAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGLLE 91
           DI+ AAA+AAE +R   P  +      +  +    TA +     ++VD+DAIF +PGL++
Sbjct: 121 DIRLAAAQAAELYRRPPPPLALPEDPQEGTSGGGATATSGRPAAVFVDEDAIFDMPGLID 180

Query: 92  DMAAGMMLPPPQHFR----------DDMDFYSDVSLW 116
           DMA GMML PP   R          DD  ++ D  LW
Sbjct: 181 DMARGMMLTPPAIGRSLDDWAAIDDDDDHYHMDYKLW 217

[Close]
BLAST of Cp4.1LG14g05940 vs. Swiss-Prot
Match: DRE1F_ORYSJ (Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. japonica GN=DREB1F PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.1e-07
Identity = 36/97 (37.11%), Postives = 51/97 (52.58%), Query Frame = 1 

Query: 32  DIQKAAAEAAEAFR---PAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGLLE 91
           DI+ AAA+AAE +R   P  +      +  +    TA +     ++VD+DAIF +PGL++
Sbjct: 121 DIRLAAAQAAELYRRPPPPLALPEDPQEGTSGGGATATSGRPAAVFVDEDAIFDMPGLID 180

Query: 92  DMAAGMMLPPPQHFR----------DDMDFYSDVSLW 116
           DMA GMML PP   R          DD  ++ D  LW
Sbjct: 181 DMARGMMLTPPAIGRSLDDWAAIDDDDDHYHMDYKLW 217

[Close]
BLAST of Cp4.1LG14g05940 vs. TrEMBL
Match: A0A140DCV6_CUCME (CRT/DRE-binding factor 1 OS=Cucumis melo PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 4.4e-36
Identity = 80/101 (79.21%), Postives = 88/101 (87.13%), Query Frame = 1 

Query: 18  STCRRSIFSDKELMDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETT-PENVLYVD 77
           S  R  + +  +  DIQKAAAEAAEAFRPAESDGSSVDDSRTEN M AETT PENV Y+D
Sbjct: 112 SAWRLPVPASTDARDIQKAAAEAAEAFRPAESDGSSVDDSRTENGMMAETTTPENVFYMD 171

Query: 78  DDAIFGLPGLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 118
           ++A+FG+PGLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 172 EEAVFGMPGLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212

[Close]
BLAST of Cp4.1LG14g05940 vs. TrEMBL
Match: A0A0A0L9N0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G180260 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 4.8e-35
Identity = 77/101 (76.24%), Postives = 87/101 (86.14%), Query Frame = 1 

Query: 18  STCRRSIFSDKELMDIQKAAAEAAEAFRPAESDGSSVDDSRTEN-MMTAETTPENVLYVD 77
           S  R  + +  +  DIQKAAAEAAEAFRP+ESDGSSVDDSRTEN MM   TTPEN+ Y+D
Sbjct: 113 SAWRLPVPASADARDIQKAAAEAAEAFRPSESDGSSVDDSRTENGMMMETTTPENLFYMD 172

Query: 78  DDAIFGLPGLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 118
           ++A+FG+PGLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 173 EEAVFGMPGLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 213

[Close]
BLAST of Cp4.1LG14g05940 vs. TrEMBL
Match: A0A077B3Y3_9ROSI (C-repeat binding factor 4 OS=Vitis cinerea GN=CBF4 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.5e-17
Identity = 50/105 (47.62%), Postives = 71/105 (67.62%), Query Frame = 1 

Query: 18  STCRRSIFSDKELMDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDD 77
           S  R  + S ++  DIQKAAAEAAEAFRP E+DG   D+ R E+ ++   TP+NV  +D+
Sbjct: 115 SAWRLHVPSSRDAKDIQKAAAEAAEAFRPMENDGVMQDERREESEVSEVRTPDNVFVMDE 174

Query: 78  DAIFGLPGLLEDMAAGMMLPPPQ-----HFRDDMDFYSDVSLWSY 118
           + +FG+PGLL +MA G+++PPP      +  DDM   +D+SLWSY
Sbjct: 175 EDVFGMPGLLVNMAEGLLMPPPHSVADGYGGDDMAADADMSLWSY 219

[Close]
BLAST of Cp4.1LG14g05940 vs. TrEMBL
Match: A0A077B3X0_9ROSI (C-repeat binding factor 4 OS=Vitis palmata GN=CBF4 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.3e-16
Identity = 51/105 (48.57%), Postives = 69/105 (65.71%), Query Frame = 1 

Query: 18  STCRRSIFSDKELMDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDD 77
           S  R  + S ++  DIQKAAAEAAEAFRP E+DG   D+ R E+ +    TP+NV  +D+
Sbjct: 115 SAWRLHVPSSRDAKDIQKAAAEAAEAFRPMENDGVMQDERREESEVR---TPDNVFVMDE 174

Query: 78  DAIFGLPGLLEDMAAGMMLPPPQHFR-----DDMDFYSDVSLWSY 118
           D +FG+PGLL +MA G+++PPP         DDM   +D+SLWSY
Sbjct: 175 DDVFGMPGLLVNMAEGLLMPPPHSVEDGYGGDDMAADADMSLWSY 216

[Close]
BLAST of Cp4.1LG14g05940 vs. TrEMBL
Match: A0A077AZV1_9ROSI (C-repeat binding factor 4 OS=Vitis rubra GN=CBF4 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.3e-16
Identity = 51/105 (48.57%), Postives = 69/105 (65.71%), Query Frame = 1 

Query: 18  STCRRSIFSDKELMDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDD 77
           S  R  + S ++  DIQKAAAEAAEAFRP E+DG   D+ R E+ +    TP+NV  +D+
Sbjct: 115 SAWRLHVPSSRDAKDIQKAAAEAAEAFRPMENDGVMQDERREESEVR---TPDNVFVMDE 174

Query: 78  DAIFGLPGLLEDMAAGMMLPPPQHFR-----DDMDFYSDVSLWSY 118
           D +FG+PGLL +MA G+++PPP         DDM   +D+SLWSY
Sbjct: 175 DDVFGMPGLLVNMAEGLLMPPPHSVEDGYGGDDMAADADMSLWSY 216

[Close]
BLAST of Cp4.1LG14g05940 vs. TAIR10
Match: AT4G25490.1 (AT4G25490.1 C-repeat/DRE binding factor 1)

HSP 1 Score: 67.4 bits (163), Expect = 6.7e-12
Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 1 

Query: 32  DIQKAAAEAAEAFRPAESDGSSVDDS--RTENMMTAETTPEN---VLYVDDDAIFGLPGL 91
           DIQKAAAEAA AF+    D ++ +      E M+ A  TPE      Y+D++ +FG+P L
Sbjct: 120 DIQKAAAEAALAFQDETCDTTTTNHGLDMEETMVEAIYTPEQSEGAFYMDEETMFGMPTL 179

Query: 92  LEDMAAGMMLPPPQ---HFRDDMDFYSDVSLWSY 118
           L++MA GM+LPPP    +   D +   DVSLWSY
Sbjct: 180 LDNMAEGMLLPPPSVQWNHNYDGEGDGDVSLWSY 213

[Close]
BLAST of Cp4.1LG14g05940 vs. TAIR10
Match: AT4G25480.1 (AT4G25480.1 dehydration response element B1A)

HSP 1 Score: 63.5 bits (153), Expect = 9.7e-11
Identity = 44/97 (45.36%), Postives = 57/97 (58.76%), Query Frame = 1 

Query: 32  DIQKAAAEAAEAFRPAESD-----GSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL 91
           DIQKAAAEAA AF+    D     G  ++++  E + TAE + EN  Y+ D+A+F +P L
Sbjct: 123 DIQKAAAEAALAFQDEMCDATTDHGFDMEETLVEAIYTAEQS-ENAFYMHDEAMFEMPSL 182

Query: 92  LEDMAAGMMLPPP------QHFRDDMDFYSDVSLWSY 118
           L +MA GM+LP P       H  D  D   DVSLWSY
Sbjct: 183 LANMAEGMLLPLPSVQWNHNHEVDGDD--DDVSLWSY 216

[Close]
BLAST of Cp4.1LG14g05940 vs. TAIR10
Match: AT5G51990.1 (AT5G51990.1 C-repeat-binding factor 4)

HSP 1 Score: 63.2 bits (152), Expect = 1.3e-10
Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 1 

Query: 32  DIQKAAAEAAEAFR----------PAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIF 91
           +IQKAA+EAA AF+           AE++ ++ +  R E    AE     V Y+DD+A+ 
Sbjct: 126 EIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVR-EGERRAEEQNGGVFYMDDEALL 185

Query: 92  GLPGLLEDMAAGMMLPPPQ--HFRDDMDFYSDVSLWSY 118
           G+P   E+MA GM+LPPP+     +D D   DVSLWS+
Sbjct: 186 GMPNFFENMAEGMLLPPPEVGWNHNDFDGVGDVSLWSF 222

[Close]
BLAST of Cp4.1LG14g05940 vs. NCBI nr
Match: gi|659077354|ref|XP_008439162.1| (PREDICTED: dehydration-responsive element-binding protein 1A [Cucumis melo])

HSP 1 Score: 158.7 bits (400), Expect = 6.3e-36
Identity = 80/101 (79.21%), Postives = 88/101 (87.13%), Query Frame = 1 

Query: 18  STCRRSIFSDKELMDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETT-PENVLYVD 77
           S  R  + +  +  DIQKAAAEAAEAFRPAESDGSSVDDSRTEN M AETT PENV Y+D
Sbjct: 112 SAWRLPVPASTDARDIQKAAAEAAEAFRPAESDGSSVDDSRTENGMMAETTTPENVFYMD 171

Query: 78  DDAIFGLPGLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 118
           ++A+FG+PGLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 172 EEAVFGMPGLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212

[Close]
BLAST of Cp4.1LG14g05940 vs. NCBI nr
Match: gi|449446069|ref|XP_004140794.1| (PREDICTED: dehydration-responsive element-binding protein 1A [Cucumis sativus])

HSP 1 Score: 155.2 bits (391), Expect = 6.9e-35
Identity = 77/101 (76.24%), Postives = 87/101 (86.14%), Query Frame = 1 

Query: 18  STCRRSIFSDKELMDIQKAAAEAAEAFRPAESDGSSVDDSRTEN-MMTAETTPENVLYVD 77
           S  R  + +  +  DIQKAAAEAAEAFRP+ESDGSSVDDSRTEN MM   TTPEN+ Y+D
Sbjct: 113 SAWRLPVPASADARDIQKAAAEAAEAFRPSESDGSSVDDSRTENGMMMETTTPENLFYMD 172

Query: 78  DDAIFGLPGLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 118
           ++A+FG+PGLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 173 EEAVFGMPGLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 213

[Close]
BLAST of Cp4.1LG14g05940 vs. NCBI nr
Match: gi|720072883|ref|XP_010278524.1| (PREDICTED: dehydration-responsive element-binding protein 1D-like [Nelumbo nucifera])

HSP 1 Score: 96.7 bits (239), Expect = 2.9e-17
Identity = 54/89 (60.67%), Postives = 67/89 (75.28%), Query Frame = 1 

Query: 32  DIQKAAAEAAEAFRPAESDG-SSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGLLEDM 91
           DIQKAAAEAAEAFRP ESD  SS DD + EN     T+ ENVLY+D++AIFG+PGLL +M
Sbjct: 140 DIQKAAAEAAEAFRPQESDAMSSADDVKPEN--ATATSSENVLYMDEEAIFGMPGLLTNM 199

Query: 92  AAGMMLPPPQHFR--DDMDFYSDVSLWSY 118
           A G++L PP   +  DD++  +DVSLWSY
Sbjct: 200 AEGLLLSPPHCLQGWDDVESDADVSLWSY 226

[Close]
BLAST of Cp4.1LG14g05940 vs. NCBI nr
Match: gi|674268569|gb|AIL00808.1| (C-repeat binding factor 4 [Vitis cinerea])

HSP 1 Score: 95.9 bits (237), Expect = 5.0e-17
Identity = 50/105 (47.62%), Postives = 71/105 (67.62%), Query Frame = 1 

Query: 18  STCRRSIFSDKELMDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDD 77
           S  R  + S ++  DIQKAAAEAAEAFRP E+DG   D+ R E+ ++   TP+NV  +D+
Sbjct: 115 SAWRLHVPSSRDAKDIQKAAAEAAEAFRPMENDGVMQDERREESEVSEVRTPDNVFVMDE 174

Query: 78  DAIFGLPGLLEDMAAGMMLPPPQ-----HFRDDMDFYSDVSLWSY 118
           + +FG+PGLL +MA G+++PPP      +  DDM   +D+SLWSY
Sbjct: 175 EDVFGMPGLLVNMAEGLLMPPPHSVADGYGGDDMAADADMSLWSY 219

[Close]
BLAST of Cp4.1LG14g05940 vs. NCBI nr
Match: gi|674268527|gb|AIL00787.1| (C-repeat binding factor 4 [Vitis rubra])

HSP 1 Score: 93.2 bits (230), Expect = 3.2e-16
Identity = 51/105 (48.57%), Postives = 69/105 (65.71%), Query Frame = 1 

Query: 18  STCRRSIFSDKELMDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDD 77
           S  R  + S ++  DIQKAAAEAAEAFRP E+DG   D+ R E+ +    TP+NV  +D+
Sbjct: 115 SAWRLHVPSSRDAKDIQKAAAEAAEAFRPMENDGVMQDERREESEVR---TPDNVFVMDE 174

Query: 78  DAIFGLPGLLEDMAAGMMLPPPQHFR-----DDMDFYSDVSLWSY 118
           D +FG+PGLL +MA G+++PPP         DDM   +D+SLWSY
Sbjct: 175 DDVFGMPGLLVNMAEGLLMPPPHSVEDGYGGDDMAADADMSLWSY 216

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g05940 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DRE1B_ARATH1.2e-1044.68Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana GN=DRE... [more]
DRE1A_ARATH1.7e-0945.36Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana GN=DRE... [more]
DRE1D_ARATH2.2e-0940.82Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana GN=DRE... [more]
DRE1F_ORYSI6.1e-0737.11Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. indica ... [more]
DRE1F_ORYSJ6.1e-0737.11Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. japonic... [more]
BLAST of Cp4.1LG14g05940 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A140DCV6_CUCME4.4e-3679.21CRT/DRE-binding factor 1 OS=Cucumis melo PE=2 SV=1[more]
A0A0A0L9N0_CUCSA4.8e-3576.24Uncharacterized protein OS=Cucumis sativus GN=Csa_3G180260 PE=4 SV=1[more]
A0A077B3Y3_9ROSI3.5e-1747.62C-repeat binding factor 4 OS=Vitis cinerea GN=CBF4 PE=4 SV=1[more]
A0A077B3X0_9ROSI2.3e-1648.57C-repeat binding factor 4 OS=Vitis palmata GN=CBF4 PE=4 SV=1[more]
A0A077AZV1_9ROSI2.3e-1648.57C-repeat binding factor 4 OS=Vitis rubra GN=CBF4 PE=4 SV=1[more]
BLAST of Cp4.1LG14g05940 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G25490.16.7e-1244.68 C-repeat/DRE binding factor 1[more]
AT4G25480.19.7e-1145.36 dehydration response element B1A[more]
AT5G51990.11.3e-1040.82 C-repeat-binding factor 4[more]
BLAST of Cp4.1LG14g05940 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659077354|ref|XP_008439162.1|6.3e-3679.21PREDICTED: dehydration-responsive element-binding protein 1A [Cucumis melo][more]
gi|449446069|ref|XP_004140794.1|6.9e-3576.24PREDICTED: dehydration-responsive element-binding protein 1A [Cucumis sativus][more]
gi|720072883|ref|XP_010278524.1|2.9e-1760.67PREDICTED: dehydration-responsive element-binding protein 1D-like [Nelumbo nucif... [more]
gi|674268569|gb|AIL00808.1|5.0e-1747.62C-repeat binding factor 4 [Vitis cinerea][more]
gi|674268527|gb|AIL00787.1|3.2e-1648.57C-repeat binding factor 4 [Vitis rubra][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g05940.1Cp4.1LG14g05940.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG14g05940Cucsa.251030Cucumber (Gy14) v1cgycpeB0673
Cp4.1LG14g05940CmaCh16G001510Cucurbita maxima (Rimu)cmacpeB344
Cp4.1LG14g05940CmoCh16G001580Cucurbita moschata (Rifu)cmocpeB307
Cp4.1LG14g05940Cla006212Watermelon (97103) v1cpewmB227
Cp4.1LG14g05940Csa3G180260Cucumber (Chinese Long) v2cpecuB214
Cp4.1LG14g05940MELO3C006869Melon (DHL92) v3.5.1cpemeB190
Cp4.1LG14g05940ClCG05G007780Watermelon (Charleston Gray)cpewcgB207
Cp4.1LG14g05940CSPI03G16550Wild cucumber (PI 183967)cpecpiB217
Cp4.1LG14g05940Lsi05G012660Bottle gourd (USVL1VR-Ls)cpelsiB172
Cp4.1LG14g05940MELO3C006869.2Melon (DHL92) v3.6.1cpemedB233
Cp4.1LG14g05940CsaV3_3G016760Cucumber (Chinese Long) v3cpecucB0257
Cp4.1LG14g05940Bhi01G001000Wax gourdcpewgoB0290
Cp4.1LG14g05940CsGy3G016670Cucumber (Gy14) v2cgybcpeB327
Cp4.1LG14g05940Carg16703Silver-seed gourdcarcpeB1215
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG14g05940Melon (DHL92) v3.6.1cpemedB219
Cp4.1LG14g05940Silver-seed gourdcarcpeB0009
Cp4.1LG14g05940Silver-seed gourdcarcpeB0998
Cp4.1LG14g05940Silver-seed gourdcarcpeB1272
Cp4.1LG14g05940Cucumber (Chinese Long) v3cpecucB0281
Cp4.1LG14g05940Cucurbita pepo (Zucchini)cpecpeB023
Cp4.1LG14g05940Cucurbita pepo (Zucchini)cpecpeB232
Cp4.1LG14g05940Cucurbita pepo (Zucchini)cpecpeB245
Cp4.1LG14g05940Cucurbita maxima (Rimu)cmacpeB425
Cp4.1LG14g05940Cucurbita moschata (Rifu)cmocpeB386
Cp4.1LG14g05940Cucurbita moschata (Rifu)cmocpeB557
Cp4.1LG14g05940Wild cucumber (PI 183967)cpecpiB229
Cp4.1LG14g05940Cucumber (Chinese Long) v2cpecuB226
Cp4.1LG14g05940Watermelon (Charleston Gray)cpewcgB202
Cp4.1LG14g05940Melon (DHL92) v3.5.1cpemeB181
Cp4.1LG14g05940Cucumber (Gy14) v2cgybcpeB746