Cp4.1LG14g03920 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG14g03920
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Serine hydroxymethyltransferase
Location	Cp4.1LG14 : 1903467 .. 1913637 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTGTCTAATTCCCATTCCAATCTTTCTCTTGGAATCTCATTGCATGCTTCGCCACCGCACCGCGTTCAGATTGCTGATGATTCCATTCTGCTTCATCTCGAATCTTCTCGACAGGAACCCACGTTTTCGTCCCCCCCAATCCCTCTTCAGTTGATGGAGCCGCTGACGGAGAGTCACAGAGACGAGGTTGGAGATGCGGAGAGAGAAGACGATGTCTACGACGACAGGGATGTAGAAGAGTTTCGTATTCTAGGCCATTCTATGTGCTTGAAGCGCCGAAGAGATAGTGAATCTTCGTTCTCGTCCAGTTCTGCAAAGAGAAATTCGTGTGAACGTGATTTAGAGACACGAAGAAGTGCTGTACGGTCGTGGGGTAACCAGACCCTTCGAGCCGCGGACCCTAACCTATTTGGAATTATGGAGAAGGAGAAACAGAGGCAAATCAAGGGCATTGAATTGATTGCTTCTGAGAATTATGTGTGTCGTGCTGTAATGGAAGCACTTGGAAGCCACTTGACTAATAAGTACTCCGAAGGTATGCCCGGTGCGAGGTACTACTGTGGAAATCAATATATAGATGAGATTGAAACGCTATGTCGTGAGCGCGCATTGGCAGCGTTTGGTCTTGATTCTGATAGTTGGGGAGTTAACGTGCAACCTTATTCATGCACGTCCGCGAACTTTGCCGTCTACACTGGTCTGCTACTCCCGGGTGATCGAATCATGGGGTTGGATACTCCTTCTGGTGGCAATACTAGTCATGGCTACTGTACCCCGAATGGAAGAAAAGTTTCTGGGGCCTCAATTTTCTTTGAGAGTTTTCCATATAAGGTTAATCCGCAAACTGGGTATATCGATTATGATAAGCTTGAGGAGAGGGCGCTTGACTTTCGCCCAAAAATACTTATTTGTGGGGGGAGCTCGTATCCTCGTGAATTGGATTATGGAAGGTTTAGGCAGATTGCAGATAAGTGTGGAGCAGTTCTGATGTGTGATATGGCTCAAATCAGTGGCCTTGTTGCTGCTAAGGTTTGAATTTTTCTTCACCATCACCGATGCTACGGCCCTTGCTTGAATGTCTGTGTATTAATTTTTTGGTTTCTCGGCTCATCGAAGTTTGTGGTTTTCTTTTCACATGTTCTAATTGCTATCATGTCCTCATTCTCTTGGGTTGCAATTTAGTTGCTTGTTAACATGATTATGATTTTTGAATTGTTTTACCTGACACTCAGAAATTGCGTCAAAGGGTGGTTGTATGGAATTTCTTTGTGATAGTAAAATGTAACTGACCAAGGGATCTCGGTAGACACTGATTTTAGGTCTTTACCTTAGTTTAGCAGTGTGTTGGGCTAAGATGTCTTGACCCCATTGATTTTATGAGAATTGAAACCTTTGAGAAACACTCTGGACTGCTTTTGAATCTTTAAGCTTATGAATTATGGTATTGTTCTTCTTGTAAAATATTTTTTCTTTCTACTGGATTGTATTATACAGTTCGTTCAACATCGTGTTTATGCAATTTTCAGTGGGTTTCTTTTACATCTGTAATTATTTTTTCACTTGCATTGTTTGGTCCAGTCCATCACTACTACTTCATGTGTAATCCTGTAATTTTAGACAAAGAATTATCCCTACTCTGTTTATGTTTTGATTTATTTGGATTTGAATTTTATTACAGGAATGTGTCAGCCCTTTTGGGTACTGTGATGTTGTGACTTCCACTACTCATAAGAGCCTTCGAGGTCCAAGGGGAGGTATAATTTTCTATAGGAAGGGTAGTAAGCCAAGGAGGAGAGCAATGCTTCTGTATCAGGGAAATGAAGCTAACCAATATGACTTTGAGGAGAAAATCAACTTCGCTGTTTTCCCATCCTTACAAGGTGGACCACACAATAACCATATTGCTGCGCTTGCTGTGGCTCTAAAACAAGTGGCTACTCTGGAGTACAAAGCATACATGCAGCAGGTGAAAAAAAATGCTCAAGCTTTAGCTTCTGCTCTACTCCGAAAGAACTACAAGCTTGTAACTGGTGGCACAGATAATCACATGGTACTCTGGGATCTAAGGTCCTTGGGATTGACAGGTAATAATTTTTATCCAAATTTTGCAGATTGATGTGAACATGATACATTTTAGGTGCACAATTAGTTTTTGTTTCTAGAGGAAAGAGGCGCACTAAAACATTGCTCATGCACAGTAAGGGTAGAATATGTTATGCACTGTGGGTTGTGATTAGAGGAAATGGTATATTATTATATTACATGAGTTACATAATTTGGAATAAATAGATTTGTTTTGTATCAACTGTATAACCATTCATTCAAAACAGGATACTGTAGTTGAGTACGCTTAAATAGTTATCTTAATTAATTAGTAAGGTGTTAGAAATAAGAATTTGGTTGGCAAGAAATGAGAGAATTTTTCAAGATAATTCTTAATCAGTTAGTCATAAAAAAAGACGTGTCAGAAGTGATGAAAAGATGAACAAGGCATGCTATTTTAAGGCAAGGCAAGTCTTAGCATTAGGGTGCAAGTAAAATCAAGCTTAATCAGTCAGCAGTGGTTTGGGATGTTGTGTGCCGACCATCAACCGAGTCGACTGATTAAGCGTTTCCTATTTCCTTCATTTTATAATTTCTTTCCCTTGAAAGAAAATTAAGATAAGCGAAAAATTGCCTAATTGAACCGACCTAACCGCAAATCAAGTCAATTTAGTTGGCATGGTTACTACATAATGTGTGGTCGGATGCAGTTTTTCATTTTTTCAAAGATTATATTAGTGGTTCAGTGTCGATTTTGCCCATAAATTGAGGCATTACTCCCCTACTTAGCATCTAGCACTATCAGAAGCCTCTTGTCTTCTTAGGACACATCCTCCTGTATTGAGCCTAATACTGAGATCATAAGTATAATTTTGACGTCATGAAATAGCTTTTCTGACTTTTCAACTGGATACAGGACATTGTTTCATTGATAAAAGAATTTTAATATCATAGTGCGCTATTTAGTATCCTGCAGGAAGATCCATTTCTCTGGCTTCTTTATTTGTATTATACGATGCAAAACAAATGAAGATAGATTCTGAACGATTTTAATCTATTTCAACTTAACNTGTTCCCCTATATCCCTTATTTTCTTAGGCTTTGTTTCATGATTTTAGTATTTTGCTTGATTTTTATTCTTCATTTTGTATTCCATATTCTTATACGTCTGTTTCTTCTAAGTTCTAGCTTTGATGGTATATGTGGCTGCTTACTCTATTATTCTCCATTCATTATACGTTGTGTAATCTTTTTGATGCCATGCTAATTGTAGGTAAAAACTTTGAGCAAGTTTGTGAGATGTGCCACATTACTCTCAACAAAATTACAATATTTGGTGATAATGGAATTATTACTCCTGGAGGAGTAAGGATCGGTGAGTTTCCCTCTTATATTTCATCTTTTGGGGATATCCTAAGATTGAAAAGCTCAGTATGCATTGATTATTCTAATAAATTAGCTGTCTGTCTGTTATCCCTGCAGGCACCCCAGCTATGACATCAAGAGGCTGTCTGGAATCTGATTTTGAAGTAATTGTAGAATTTCTTCATATAGCCGCTCAAATTGCAATTGTTGTTCAGCGAGAGCATGGGAAGTTGCCGAAAGCTTTTCTTAGGGGCCTTCAAAGTAATAATGAAGTTGTTGAGCTCGGATACCGTGTTGCAAGTTTTTCAGCTAAATTTGCAATGCCTGGCCTTGAAACTTGAATGGAGGGTGACCATTTGTTGTCCCTAAAAAAGAAAAATAATATCTGCTGCTCATCATGCCTTCCATATAAAATCTTGAAGCTTCTCCCTCTTGGGGTTGCTGTTTATTCAGATGCCTGCATTTACTTGTCATCTTATTGTTTTGAGAAGGGCCTTTGCAATCATCAGAAGAGAATTTAGTAATGCCGATCTTTTCTTCTACAAGGCCGAATGTGTACACAATGGATAGAGGCGTCATGAGCAGTTTTTTGGTGGTGTCATTTTTGGGATCCAATCAACTGAAGAAATTGGTGGCTACGAGGGAATATAATTTAAAAAAATATAGTACTCTATCAGAGACCGGAAGAATGCTTTGGACCTGATTGTTTATGGCCACGGCTGAGGAATCATTTTGCCAGCTTGATGTGTGATGATGTGGTAGGAAGTACGCACAATGCTGGTCAATTTCCTTTGATCAGAGTTCCATTGTGTAAGTTCTTGCTACATTTCCTCCCTCATACAAATTATGTCAAGTTCATTCATTATAATGTTATATAAGTGTCCATTCATCATTATAGTTAACTTCTCCAAAGTTCTAGTCGATTTCATTCATCCATGATTGTTAATAGAAATTGCTGCTATGGTTCTTGCACTTCTACATTTTCCTTTTCGTTATGATGCATGATCGTCTTTTCGAAATTGCAGAAGTTGACGTAGTTACCATAGATAAACTGATGAGATCTGATATTTGCATTTGAGTTAGTACATTAGTGTTTGTTTTGTTCCCAACCAAACTGTGATCATCTTGAGGCACAATCACTCCATCCAATTTTTCTGTATTGTGGGGCCTATATTGATAGGACAAAAACTGTACAGCCCTTTTCCATTTTCTGTGCTAGTGAAAGTTGTGTGCTGATCTTTTACTTTTACATGTTCAGAAGGAAACATAACTGTAGTTGCTTTTTCCCATGTTGATTCTGAAGTTCTGTTATAGACTGTCTGGATGTCGTGGGGGGCAAAAAAAAAAAAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCTGCAAAAAAGGGGATGTGACATGAAAACATAAGAATCAGCTTGGGCAATAGGAGTACATTTATATGAGCTTAAGATGCAGAAACTGTTGGCTAATAGTTGCTTGGAAATAGACTAGAAATCACCTCCACTACCAAAAAGCTAAAGTTGGATGGAGGAGGAGAACCTTTCTTTTTTTTTTTTTCTTTTAACTTTTGACCTTCAGTTCCCCACAGTCCTCTTTCAAATACAGGCACAGGGGCCATGGCTCTGCTTCCACTATTTCTTCTTCATGCCTTGTGTTTTCTGCACAATGCCACATAGTTCTTGGACTACAGTCATCTTGTTCTTCTTATTGGGCAAGCTTAGGGCCAAATGAGGGGGAAAAGAGTTAATGAGAATGGTGAATCCGAGATCTTGTACCATCCATTAGGGTCTTTTTCAACGAGATCTACTATCCATTAGGGTCTTTTTCTAGCTCCTTCCCTAGGTTTAGTTTAACAACCTAACTAAAAGAGAGAGTAGGAACCGTGAGGAATCACGACTTTCCACAATGGTTTGATATTGTCCACTTTGAGCATAAGCTCTCATAACTTTACTTTGGACTTCCCCAAAAGGCCTCATACCAATGGAGATGTATTCCTCACTTATAACTCATGATCATTTCCTAAATTAGTCAACGTGAGACTCCTTCTCAACAATCCTCAACTGGAACTAGGGAGGGAGAGAGTAGATGCTGATCCGAAAGTTTTAGAACATAAGAACACAAGATTTCATTGCACAACGAAAATGACAAACCCTTTTCACCCGAACGTCTAAAATTCAGTTCTCCCTTTATCATTTTATATCATTATAGGACCATACTTGATGGAGCAGGAATCATGACCAAAGTTTCTTGAGAATATTTTCTTAGAAAATTGTATTAAGGATGGAAAAAGCTAAGTCCATGGCTTCTCTCTCTCCCTCTCTCTCTCTCTAGGAGTCTTATCAAGTTGTCCATTTTCCCATCATTAATTCTCGATGGCAATGATTAGCCATTTACTATCACAACTACAAAGGAAAAGAATCTCTACCAAAGTTCATTATTTAAAAAGTAAAGATAAAAACAGAGAAATCTTTGCACAATCTAATGGTACAAACATCACATATATTTGGTTTGCCCACTCAATTGCATTGCCCTGTCCCCCCGGTTTATTTACAGTTCAGGGAAAGAAAAGAGAAGAAAGAGACCAAATCTTTAACATTGGGTTTTTCGGAAAAATTGTTTATGTATATGTTCATGTTGAATGAATCTTTTGTGTTAATATTAGTTGACTAGGCGTGTAATATACTTCAATCATAATGAAAGTCTATGTTATTTTAGGTACTTTGTCGCCAAAGTAAGCATAGTTCAACAGTAATCAACATGTATTCTCCTACCTGTTGTTGTACTGGAGAAAGGTATTTTATCAGTATTTATATATATCTTTTTATTTATATCTCGAACATTGCATTAGAATGTTTTTTTTTTTATGGTAAAGTTATAAAATCATATGAAAATTATATCTAAAACTTTGACTTGCTTTAGCTTTAGAGCTTTAGAGAGAAGAGTGTAGGGAGGTCATAGAATGATGCCTTTTCTTCATGGGAGGATGAATAGGTGATTGGAGAGATTGAGAGGGCCATGAAAAGGAACCCTAAATGTCATTGTCTTTGCCTATTTTCCACATCAAAGAGCCTTGTGGGTAGGGAGTTTCTTCATCATTATCATTATTTTCTTCCTCTTTGCCTTCATAATTTATTTGGGTTAAAAACATAATTTATTAACCATTCCTTAAAAAAGTTACGTTTTTGTAGTTACCCGTAGGTCGTTCGGGTCGTTCTTTAACACTAAATTACGAAAATACCCATAAATTTTGTTCATAAACATTTCAGAACTGCATTAAGGACCTGAATATTATCACGTTGTTCAGTATCACTACTACACTATTTCCAGTAGCTTTAAATTTTAAGAACTTTATTACAATTTTTTAAAAGTATTTTGTAGACAAAAGCGAAGATTTAGGGATACTGTTTTAGTAACTTGGCAAAAAAAAGGAAAAATACAAGTAGTTTAGGTTGATTAAAATGAGGACAAGATCTTGTCTACTCACAGAGAAGATTGTGTGGCTGTTCCTTTTAATCTTTTTTAAAAATAAACTGTTTAGATGTTTTCAAAATTTGTTGAGCTTTTTTATCAGGATAATTAAAGCTGTTCTTGGTTTCAAAATTATAAATTATGAACAGATAGTTCACAGAAACCTTTATACTTTAGTAGCCTCCTGTTTCGTGCAAAAGAAGAAAAAAAAAAACAATAACTCGTCTCTTTTGTACTTTGATTAGTAGTGATATTGGTTGATCTAACCGACAAATATCTTTTAATAGATTCTTGTCTATTGATCTCGTCGCTCTTGTCTAACTCCTTGTTTTGTAAATTAGTCTTGGTTGATCCGATCGGACCCTGAACATGTGAGAGTCCAGCTATCATTTTGCACACTGGATATCTCTTACCTATTTGAGAAGGAGCCTTGGATATCGTATATCAAAGACATCTGGCTCCTGACTTGTCCTATCTTAGAAAACGATATCATCAAGAAAAAAAACACATATGAAAGGGAGAAACAGTCTCGGATATCGTATATCAAAGACACCTGCCCTTGACCCATCAAAAAAAGAACATACACACATGAAAGGGATGTATAGGTTCTCTTACCACAAGTTAAGCTCAACAATATATGAAGGGAAAGATTCAAACCTTAGGCCGGTTGAATTAGATTCAAACTTTTGAGCTACAACACCAATTTTTTTGGCTAAGAACACAACTTAACCCGTTGAGCCAGATTCTTTTGACCTACAACACTATCTGTTTTGGTCGAGAACATATATCTTAATCCATTAAACTCTACGAAAAAGATCCAAAAAAAAAAAAAAAAAATCAAATCACATTGATACTTTAATTAGAGTACAAAATTGTTTATGTATTGAGTATAATTGACCTTTGGATTTGTTTGGAATAATATTAGTGTGGCTCTGTGGTGTGCTTATAAAATGCCACAAGAATCTTTCCTTTCTTCACTGCCAAAATCCTCTCTCTCTCCTCTCTCTCTCTCTCTCTCTCTATTTTGCTGCTTTTCTTCAAAGCAATTTCAGAATCAATGCTTCTCTCTCTCTCTCCCTCTCTCTCTCTCCTCCTGAATTTTCTTCCTTTTAAGCTATCATAGGCTGCAACATCATCACAACCTTTCTATAAACAATGTGATTCCAAATCAAAAATGAAAAAACACTAAGTAAAAATTACACAACATCTCTTATCTTCCAAAAATCTTCACTATTTCTTCTCAAATTTTGCATTTTGAAGCATACCCAGATCCTCCTTTTCCCCCTTCTCTACCTGTTAGTAGTACACATGTCCAAAAGCTTCTGTCTTCCCTCAACAATCTCATCAAGGAAGTCATCAAGCTGCCCAACAATGGCGTCCACTCCATTTCTCAATGTCCCAAACCAACCATTCAATCTCTCAACTTTTTCTTCAATTTCATCTCCTTCTTCTTCTTCTTCCTCCATACCCCTCTCGAGCTCCACTTTCAGGCCTTCCATGGCTGCCTTTGCTTCCCTGAATTCAAACAGCAAGATCCCCACTGACTGCCCATCTACTCTGTCTATTTCATTTGCCACTCTCTGTCTCAATCTTGCCATTGATGCTATGAAGCTCGAGCTGAACATGGTCCTTAAATGGTGATCTTCTTCATTCTCAATCTCACAACTTTCATGGAAGCTTGATTCTGGCCAACAATACACAAGAGCACACAGAAGAATCATTAGAAGTAATGAGCTGATGCTCTTCACTGCATGAAGAACCCCTCTGAATCCATTGAAAGCATTCAATTTCAACGTTGATCCAATTCCGGTTGACGTGCCGCCGCTGCCTCTGCTGTTGAAACAGAACAGTGATAATGGATGAATTCTTGTATACATCAAGCTTCTATTTTCCTCTTCTAACCCAAAAACATTCCTCTCGAAATCAGTAATTGAACGAAGAATCTGCAAAACCCCAAAACAGAGCAAAACAGAGTATATCAAAACAGAGCAAAACAGAGTATATCAAAACAGAGCAAAACAGAGTATATCAAAACAGAGCAAAACAGAAACGAACCCTTTGAGAAGCCCGAGCGTTTACACGAAGAAAATGAGGATCCTGCAAAGAAGAAGTTATAGCAAAAGCTTCCTCATGAAAAATCTCCAAGCTTGAGATTCCAGATTTGAGGACTTGGCAAGCTTCCCATATGCGGGAGCTTTCATCCATATACTCATCAAGCCACTTACCACCAACGGGGAGGTGGAGGCGTTGGCCAAGTTGGATGAGCTGAGAGTGGAGGGTTCTAAGAAAAGAGAGGACTTTTTGAAGAAAGTGAAGAGACATGAAGTCGGAGGAGACGAACGCGGCGTCGAGGTCGTCGAGCTCATGGGAGATGAACTGATAGAAGCCATGGAGGGAGGTGGCTGTAGAAGAGGAGGTACCCATTTGAGAGAAGTGTGTAAATGTGTGAAAAGTGGAGAGCTTTATATGTGATGGAGGGGGAGAGATGAAGAAGGGAAGATAAATAGGTGACTCTGTTTCAGAACAGGGGAGGGAAGAATAATATGAAAGGATTGGTTTGTTGGGTGCAATCATGTGTGTTTCCTATTCAGTGGAGGAGATGATTGGGCTCTGCTGTTACAAAAACAATGCTTTTAAGAGAGAGAGAATGAGAGAGAGAGAGAGTCATTGAATTTGTATTGCCAAATCACAATGGATGCCAAAAATGGTTGCTATCTTTGCAAACTTGTTACACCAAACCATTAATTTATGGGTTGTAAGTATCGGGTTTTGTTTACTTTCGTCTCGGAACTTATGAACGTATAACCGCGTTGACGAAAGGAAGGAGCGAAGTCAGGATAGAGCACCATTTGTAAAGGTAAGGTCTTAGTTTTCCAGCTTCCCGAGGTTGGGCGTGCTCTGCTGTAAAGGTGAAGGAGAGAAGTGAAGCTGCGACCTTATCTATGTTTCTACAATGGTCTAAAACACGCCCACCTGTAATTGGATGCATGGAGGACCGACCCCAGTTCCTCTAAATTTTTCAATTTTGTGTCTAATACACATCTAAGCTTTAATGGGTATGTCATAGATTTTTACACTTTCAATGGTTTGATTTTTACACTTTCAATGATTTTTACACATCTAAGCTTCCAACAGGCCATTGACCTAGTAGTTAAAAGTTAAAAATTCAAGGACCTAACTTAACTTTTGAAATCAAACTTGACTCGTCATAAGTTGTAGTTTTGTTGCTGATATAAATATAGCTCAAGTGAATACCGACACTGATTACTCAACA

mRNA sequence

ATGGATTTGTCTAATTCCCATTCCAATCTTTCTCTTGGAATCTCATTGCATGCTTCGCCACCGCACCGCGTTCAGATTGCTGATGATTCCATTCTGCTTCATCTCGAATCTTCTCGACAGGAACCCACGTTTTCGTCCCCCCCAATCCCTCTTCAGTTGATGGAGCCGCTGACGGAGAGTCACAGAGACGAGGTTGGAGATGCGGAGAGAGAAGACGATGTCTACGACGACAGGGATGTAGAAGAGTTTCGTATTCTAGGCCATTCTATGTGCTTGAAGCGCCGAAGAGATAGTGAATCTTCGTTCTCGTCCAGTTCTGCAAAGAGAAATTCGTGTGAACGTGATTTAGAGACACGAAGAAGTGCTGTACGGTCGTGGGGTAACCAGACCCTTCGAGCCGCGGACCCTAACCTATTTGGAATTATGGAGAAGGAGAAACAGAGGCAAATCAAGGGCATTGAATTGATTGCTTCTGAGAATTATGTGTGTCGTGCTGAATGTGTCAGCCCTTTTGGGTACTGTGATGTTGTGACTTCCACTACTCATAAGAGCCTTCGAGGTCCAAGGGGAGGTATAATTTTCTATAGGAAGGGTAGTAAGCCAAGGAGGAGAGCAATGCTTCTGTATCAGGGAAATGAAGCTAACCAATATGACTTTGAGGAGAAAATCAACTTCGCTGTTTTCCCATCCTTACAAGGTGGACCACACAATAACCATATTGCTGCGCTTGCTGTGGCTCTAAAACAAGTGGCTACTCTGGAGTACAAAGCATACATGCAGCAGGTGAAAAAAAATGCTCAAGCTTTAGCTTCTGCTCTACTCCGAAAGAACTACAAGCTTGTAACTGGTGGCACAGATAATCACATGGTACTCTGGGATCTAAGGTCCTTGGGATTGACAGGTAAAAACTTTGAGCAAGTTTGTGAGATGTGCCACATTACTCTCAACAAAATTACAATATTTGGTGATAATGGAATTATTACTCCTGGAGGAGTAAGGATCGGCACCCCAGCTATGACATCAAGAGGCTGTCTGGAATCTGATTTTGAAGTAATTGTAGAATTTCTTCATATAGCCGCTCAAATTGCAATTGTTGTTCAGCGAGAGCATGGGAAGTTGCCGAAAGCTTTTCTTAGGGGCCTTCAAAGTAATAATGAAGTTGTTGAGCTCGGATACCGTGTTGCAAGTTTTTCAGCTAAATTTGCAATGCCTGGCCTTGAAACTTGAATGGAGGGTGACCATTTGTTGTCCCTAAAAAAGAAAAATAATATCTGCTGCTCATCATGCCTTCCATATAAAATCTTGAAGCTTCTCCCTCTTGGGGTTGCTGTTTATTCAGATGCCTGCATTTACTTGTCATCTTATTGTTTTGAGAAGGGCCTTTGCAATCATCAGAAGAGAATTTAGTAATGCCGATCTTTTCTTCTACAAGGCCGAATGTGTACACAATGGATAGAGGCGTCATGAGCAGTTTTTTGGTGGTGTCATTTTTGGGATCCAATCAACTGAAGAAATTGGTGGCTACGAGGGAATATAATTTAAAAAAATATAGTACTCTATCAGAGACCGGAAGAATGCTTTGGACCTGATTGTTTATGGCCACGGCTGAGGAATCATTTTGCCAGCTTGATGTGTGATGATGTGGTAGGAAGTACGCACAATGCTGGTCAATTTCCTTTGATCAGAGTTCCATTGTGTACTTTGTCGCCAAAGTAAGCATAGTTCAACAGTAATCAACATGTATTCTCCTACCTGTTGTTGTACTGGAGAAAGTCTTGGTTGATCCGATCGGACCCTGAACATGTGAGAGTCCAGCTATCATTTTGCACACTGGATATCTCTTACCTATTTGAGAAGGAGCCTTGGATATCGTATATCAAAGACATCTGGCTCCTGACTTGTCCTATCTTAGAAAACGATATCATCAAGAAAAAAAACACATATGAAAGGGAGAAACAGTCTCGGATATCGTATATCAAAGACACCTGCCCTTGACCCATCAAAAAAAGAACATACACACATGAAAGGGATGTATAGGTTCTCTTACCACAAGTTAAGCTCAACAATATATGAAGGGAAAGATTCAAACCTTAGGCCGGTTGAATTAGATTCAAACTTTTGAGCTACAACACCAATTTTTTTGGCTAAGAACACAACTTAACCCGTTGAGCCAGATTCTTTTGACCTACAACACTATCTGTTTTGGTCGAGAACATATATCTTAATCCATTAAACTCTACGAAAAAGATCCAAAAAAAAAAAAAAAAAATCAAATCACATTGATACTTTAATTAGAGTACAAAATTGTTTATGTATTGAGTATAATTGACCTTTGGATTTGTTTGGAATAATATTAGTGTGGCTCTGTGGTGTGCTTATAAAATGCCACAAGAATCTTTCCTTTCTTCACTGCCAAAATCCTCTCTCTCTCCTCTCTCTCTCTCTCTCTCTCTATTTTGCTGCTTTTCTTCAAAGCAATTTCAGAATCAATGCTTCTCTCTCTCTCTCCCTCTCTCTCTCTCCTCCTGAATTTTCTTCCTTTTAAGCTATCATAGGCTGCAACATCATCACAACCTTTCTATAAACAATGTGATTCCAAATCAAAAATGAAAAAACACTAAGTAAAAATTACACAACATCTCTTATCTTCCAAAAATCTTCACTATTTCTTCTCAAATTTTGCATTTTGAAGCATACCCAGATCCTCCTTTTCCCCCTTCTCTACCTGTTAGTAGTACACATGTCCAAAAGCTTCTGTCTTCCCTCAACAATCTCATCAAGGAAGTCATCAAGCTGCCCAACAATGGCGTCCACTCCATTTCTCAATGTCCCAAACCAACCATTCAATCTCTCAACTTTTTCTTCAATTTCATCTCCTTCTTCTTCTTCTTCCTCCATACCCCTCTCGAGCTCCACTTTCAGGCCTTCCATGGCTGCCTTTGCTTCCCTGAATTCAAACAGCAAGATCCCCACTGACTGCCCATCTACTCTGTCTATTTCATTTGCCACTCTCTGTCTCAATCTTGCCATTGATGCTATGAAGCTCGAGCTGAACATGGTCCTTAAATGGTGATCTTCTTCATTCTCAATCTCACAACTTTCATGGAAGCTTGATTCTGGCCAACAATACACAAGAGCACACAGAAGAATCATTAGAAGTAATGAGCTGATGCTCTTCACTGCATGAAGAACCCCTCTGAATCCATTGAAAGCATTCAATTTCAACGTTGATCCAATTCCGGTTGACGTGCCGCCGCTGCCTCTGCTGTTGAAACAGAACAGTGATAATGGATGAATTCTTGTATACATCAAGCTTCTATTTTCCTCTTCTAACCCAAAAACATTCCTCTCGAAATCAGTAATTGAACGAAGAATCTGCAAAACCCCAAAACAGAGCAAAACAGAGTATATCAAAACAGAGCAAAACAGAGTATATCAAAACAGAGCAAAACAGAGTATATCAAAACAGAGCAAAACAGAAACGAACCCTTTGAGAAGCCCGAGCGTTTACACGAAGAAAATGAGGATCCTGCAAAGAAGAAGTTATAGCAAAAGCTTCCTCATGAAAAATCTCCAAGCTTGAGATTCCAGATTTGAGGACTTGGCAAGCTTCCCATATGCGGGAGCTTTCATCCATATACTCATCAAGCCACTTACCACCAACGGGGAGGTGGAGGCGTTGGCCAAGTTGGATGAGCTGAGAGTGGAGGGTTCTAAGAAAAGAGAGGACTTTTTGAAGAAAGTGAAGAGACATGAAGTCGGAGGAGACGAACGCGGCGTCGAGGTCGTCGAGCTCATGGGAGATGAACTGATAGAAGCCATGGAGGGAGGTGGCTGTAGAAGAGGAGGTACCCATTTGAGAGAAGTGTGTAAATGTGTGAAAAGTGGAGAGCTTTATATGTGATGGAGGGGGAGAGATGAAGAAGGGAAGATAAATAGGTGACTCTGTTTCAGAACAGGGGAGGGAAGAATAATATGAAAGGATTGGTTTGTTGGGTGCAATCATGTGTGTTTCCTATTCAGTGGAGGAGATGATTGGGCTCTGCTGTTACAAAAACAATGCTTTTAAGAGAGAGAGAATGAGAGAGAGAGAGAGTCATTGAATTTGTATTGCCAAATCACAATGGATGCCAAAAATGGTTGCTATCTTTGCAAACTTGTTACACCAAACCATTAATTTATGGGTTGTAAGTATCGGGTTTTGTTTACTTTCGTCTCGGAACTTATGAACGTATAACCGCGTTGACGAAAGGAAGGAGCGAAGTCAGGATAGAGCACCATTTGTAAAGGTAAGGTCTTAGTTTTCCAGCTTCCCGAGGTTGGGCGTGCTCTGCTGTAAAGGTGAAGGAGAGAAGTGAAGCTGCGACCTTATCTATGTTTCTACAATGGTCTAAAACACGCCCACCTGTAATTGGATGCATGGAGGACCGACCCCAGTTCCTCTAAATTTTTCAATTTTGTGTCTAATACACATCTAAGCTTTAATGGGTATGTCATAGATTTTTACACTTTCAATGGTTTGATTTTTACACTTTCAATGATTTTTACACATCTAAGCTTCCAACAGGCCATTGACCTAGTAGTTAAAAGTTAAAAATTCAAGGACCTAACTTAACTTTTGAAATCAAACTTGACTCGTCATAAGTTGTAGTTTTGTTGCTGATATAAATATAGCTCAAGTGAATACCGACACTGATTACTCAACA

Coding sequence (CDS)

ATGGATTTGTCTAATTCCCATTCCAATCTTTCTCTTGGAATCTCATTGCATGCTTCGCCACCGCACCGCGTTCAGATTGCTGATGATTCCATTCTGCTTCATCTCGAATCTTCTCGACAGGAACCCACGTTTTCGTCCCCCCCAATCCCTCTTCAGTTGATGGAGCCGCTGACGGAGAGTCACAGAGACGAGGTTGGAGATGCGGAGAGAGAAGACGATGTCTACGACGACAGGGATGTAGAAGAGTTTCGTATTCTAGGCCATTCTATGTGCTTGAAGCGCCGAAGAGATAGTGAATCTTCGTTCTCGTCCAGTTCTGCAAAGAGAAATTCGTGTGAACGTGATTTAGAGACACGAAGAAGTGCTGTACGGTCGTGGGGTAACCAGACCCTTCGAGCCGCGGACCCTAACCTATTTGGAATTATGGAGAAGGAGAAACAGAGGCAAATCAAGGGCATTGAATTGATTGCTTCTGAGAATTATGTGTGTCGTGCTGAATGTGTCAGCCCTTTTGGGTACTGTGATGTTGTGACTTCCACTACTCATAAGAGCCTTCGAGGTCCAAGGGGAGGTATAATTTTCTATAGGAAGGGTAGTAAGCCAAGGAGGAGAGCAATGCTTCTGTATCAGGGAAATGAAGCTAACCAATATGACTTTGAGGAGAAAATCAACTTCGCTGTTTTCCCATCCTTACAAGGTGGACCACACAATAACCATATTGCTGCGCTTGCTGTGGCTCTAAAACAAGTGGCTACTCTGGAGTACAAAGCATACATGCAGCAGGTGAAAAAAAATGCTCAAGCTTTAGCTTCTGCTCTACTCCGAAAGAACTACAAGCTTGTAACTGGTGGCACAGATAATCACATGGTACTCTGGGATCTAAGGTCCTTGGGATTGACAGGTAAAAACTTTGAGCAAGTTTGTGAGATGTGCCACATTACTCTCAACAAAATTACAATATTTGGTGATAATGGAATTATTACTCCTGGAGGAGTAAGGATCGGCACCCCAGCTATGACATCAAGAGGCTGTCTGGAATCTGATTTTGAAGTAATTGTAGAATTTCTTCATATAGCCGCTCAAATTGCAATTGTTGTTCAGCGAGAGCATGGGAAGTTGCCGAAAGCTTTTCTTAGGGGCCTTCAAAGTAATAATGAAGTTGTTGAGCTCGGATACCGTGTTGCAAGTTTTTCAGCTAAATTTGCAATGCCTGGCCTTGAAACTTGA

Protein sequence

MDLSNSHSNLSLGISLHASPPHRVQIADDSILLHLESSRQEPTFSSPPIPLQLMEPLTESHRDEVGDAEREDDVYDDRDVEEFRILGHSMCLKRRRDSESSFSSSSAKRNSCERDLETRRSAVRSWGNQTLRAADPNLFGIMEKEKQRQIKGIELIASENYVCRAECVSPFGYCDVVTSTTHKSLRGPRGGIIFYRKGSKPRRRAMLLYQGNEANQYDFEEKINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKAYMQQVKKNAQALASALLRKNYKLVTGGTDNHMVLWDLRSLGLTGKNFEQVCEMCHITLNKITIFGDNGIITPGGVRIGTPAMTSRGCLESDFEVIVEFLHIAAQIAIVVQREHGKLPKAFLRGLQSNNEVVELGYRVASFSAKFAMPGLET

Homology

[Close]

BLAST of Cp4.1LG14g03920 vs. Swiss-Prot
Match: GLYC7_ARATH (Serine hydroxymethyltransferase 7 OS=Arabidopsis thaliana GN=SHM7 PE=2 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 2.5e-92
Identity = 162/243 (66.67%), Postives = 196/243 (80.66%), Query Frame = 1


Query: 162 VCRAECVSPFGYCDVVTSTTHKSLRGPRGGIIFYRKGSKPRRRAMLLYQGNEANQYDFEE 221
           V   EC +PF +CD+VTSTTHK LRGPRGGIIFYR+G K R++       + +  YD EE
Sbjct: 349 VATKECSNPFDHCDIVTSTTHKGLRGPRGGIIFYRRGPKIRKQGHHSSHCDTSTHYDLEE 408

Query: 222 KINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKAYMQQVKKNAQALASALLRKNYKLV 281
           KINFAVFPSLQGGPHNNHIAALA+ALKQVAT EYKAY+QQ+KKNAQALA+ALLR+  +LV
Sbjct: 409 KINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYIQQMKKNAQALAAALLRRKCRLV 468

Query: 282 TGGTDNHMVLWDLRSLGLTGKNFEQVCEMCHITLNKITIFGDNGIITPGGVRIGTPAMTS 341
           TGGTDNH++LWDL  +GLTGK +E+VCEMCHITLNK  IFGDNG I+PGGVRIGTPAMT+
Sbjct: 469 TGGTDNHLLLWDLTPMGLTGKVYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTT 528

Query: 342 RGCLESDFEVIVEFLHIAAQIAIVVQREHGKLPKAFLRGLQSNNEVVELGYRVASFSAKF 401
           RGC+ESDFE + +FL  AAQI   +QREHGK  K F++ L +N ++ EL  RV +F+ ++
Sbjct: 529 RGCIESDFETMADFLIKAAQITSALQREHGKSHKEFVKSLCTNKDIAELRNRVEAFALQY 588

Query: 402 AMP 405
            MP
Sbjct: 589 EMP 591

[Close]

BLAST of Cp4.1LG14g03920 vs. Swiss-Prot
Match: GLYC6_ARATH (Serine hydroxymethyltransferase 6 OS=Arabidopsis thaliana GN=SHM6 PE=2 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 2.8e-91
Identity = 158/246 (64.23%), Postives = 198/246 (80.49%), Query Frame = 1


Query: 162 VCRAECVSPFGYCDVVTSTTHKSLRGPRGGIIFYRKGSKPRRRAMLLYQGNEANQYDFEE 221
           V   E  +PF YCD+VTSTTHKSLRGPRGGIIFY++G KP+++++ L       QYDFEE
Sbjct: 353 VAAKESPNPFDYCDIVTSTTHKSLRGPRGGIIFYKRGLKPKKQSINLNHCESNIQYDFEE 412

Query: 222 KINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKAYMQQVKKNAQALASALLRKNYKLV 281
           KINF+VFPSLQGGPHNNHIAALA+ALKQ A+ EYK YM+QVKKNA+ALASAL+ +  KL+
Sbjct: 413 KINFSVFPSLQGGPHNNHIAALAIALKQAASPEYKLYMRQVKKNAKALASALISRKCKLI 472

Query: 282 TGGTDNHMVLWDLRSLGLTGKNFEQVCEMCHITLNKITIFGDNGIITPGGVRIGTPAMTS 341
           TGGTDNH++LWDL  LGLTGK +E+VCEMCHIT+NK+ IF +NG+I+PGGVRIG+PAMTS
Sbjct: 473 TGGTDNHLLLWDLTPLGLTGKVYEKVCEMCHITVNKVAIFSENGVISPGGVRIGSPAMTS 532

Query: 342 RGCLESDFEVIVEFLHIAAQIAIVVQREHGKLPKAFLRGLQSNNEVVELGYRVASFSAKF 401
           RGCLE +FE + +FL+ AAQIA   QREHGKL K  L+ +    E+ +L  +V +F+ +F
Sbjct: 533 RGCLEPEFETMADFLYRAAQIASAAQREHGKLQKEPLKSIYHCKEIADLRNQVEAFATQF 592

Query: 402 AMPGLE 408
           AMP  +
Sbjct: 593 AMPAFD 598

[Close]

BLAST of Cp4.1LG14g03920 vs. Swiss-Prot
Match: GLYC5_ARATH (Serine hydroxymethyltransferase 5 OS=Arabidopsis thaliana GN=SHM5 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 3.3e-76
Identity = 141/244 (57.79%), Postives = 170/244 (69.67%), Query Frame = 1


Query: 162 VCRAECVSPFGYCDVVTSTTHKSLRGPRGGIIFYRKGSKPRRRAMLLYQGNEANQYDFEE 221
           V   E   PF YCDVVT++THKSLRGPR G+IFYRKG KP ++        E   YDF+ 
Sbjct: 223 VAAQEAADPFEYCDVVTTSTHKSLRGPRAGMIFYRKGPKPAKKGQ-----PEGEVYDFDA 282

Query: 222 KINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKAYMQQVKKNAQALASALLRKNYKLV 281
           KIN AVFP+LQ GPHNN I ALAVALKQV    +K Y +QVK NA  LAS L+ K Y LV
Sbjct: 283 KINSAVFPALQSGPHNNKIGALAVALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLV 342

Query: 282 TGGTDNHMVLWDLRSLGLTGKNFEQVCEMCHITLNKITIFGDNGIITPGGVRIGTPAMTS 341
           T GTDNH++LWDLR LGLTG   E+VCE+C+ITLN+  +FGD   + PGGVRIGTPAMTS
Sbjct: 343 TDGTDNHLILWDLRPLGLTGNKVEKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTS 402

Query: 342 RGCLESDFEVIVEFLHIAAQIAIVVQREHGKLPKAFLRGLQSNNEVVELGYRVASFSAKF 401
           RG +E DFE I EFLH A  I + +Q ++GK+ K F +GL +N E+ E+   V  F+  F
Sbjct: 403 RGLVEKDFEKIGEFLHRAVTITLDIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDF 461

Query: 402 AMPG 406
            MPG
Sbjct: 463 DMPG 461

[Close]

BLAST of Cp4.1LG14g03920 vs. Swiss-Prot
Match: GLYC4_ARATH (Serine hydroxymethyltransferase 4 OS=Arabidopsis thaliana GN=SHM4 PE=1 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 4.8e-75
Identity = 139/244 (56.97%), Postives = 174/244 (71.31%), Query Frame = 1


Query: 162 VCRAECVSPFGYCDVVTSTTHKSLRGPRGGIIFYRKGSKPRRRAMLLYQGNEANQYDFEE 221
           V   E  +PF YCDVVT+TTHKSLRGPR G+IFYRKG KP ++        E   YDFE+
Sbjct: 223 VAAQEAANPFEYCDVVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQ-----PEGAVYDFED 282

Query: 222 KINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKAYMQQVKKNAQALASALLRKNYKLV 281
           KINFAVFP+LQGGPHN+ I ALAVALKQ  T  +K Y +QVK NA AL + L+ K Y++V
Sbjct: 283 KINFAVFPALQGGPHNHQIGALAVALKQANTPGFKVYAKQVKANAVALGNYLMSKGYQIV 342

Query: 282 TGGTDNHMVLWDLRSLGLTGKNFEQVCEMCHITLNKITIFGDNGIITPGGVRIGTPAMTS 341
           T GT+NH+VLWDLR LGLTG   E++C++C ITLNK  +FGD+  + PGGVRIG PAMTS
Sbjct: 343 TNGTENHLVLWDLRPLGLTGNKVEKLCDLCSITLNKNAVFGDSSALAPGGVRIGAPAMTS 402

Query: 342 RGCLESDFEVIVEFLHIAAQIAIVVQREHGKLPKAFLRGLQSNNEVVELGYRVASFSAKF 401
           RG +E DFE I EFL  A  + + +Q+ +GKL K F +GL +N ++ +L   V  FSA +
Sbjct: 403 RGLVEKDFEQIGEFLSRAVTLTLDIQKTYGKLLKDFNKGLVNNKDLDQLKADVEKFSASY 461

Query: 402 AMPG 406
            MPG
Sbjct: 463 EMPG 461

[Close]

BLAST of Cp4.1LG14g03920 vs. Swiss-Prot
Match: GLYC1_DICDI (Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum GN=shmt1 PE=1 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.4e-66
Identity = 125/238 (52.52%), Postives = 163/238 (68.49%), Query Frame = 1


Query: 169 SPFGYCDVVTSTTHKSLRGPRGGIIFYRKGSKPRRRAMLLYQGNEANQYDFEEKINFAVF 228
           SPF YCDVVTSTTHK+LRGPR GIIF+R+G +          G E  +YD E KINFAVF
Sbjct: 226 SPFDYCDVVTSTTHKTLRGPRSGIIFFRRGKRVDGN------GKEIEEYDIESKINFAVF 285

Query: 229 PSLQGGPHNNHIAALAVALKQVATLEYKAYMQQVKKNAQALASALLRKNYKLVTGGTDNH 288
           PSLQGGPH N IA +AVALK+  + E+K Y  QVKKNA A+ +AL+ K YKLVT GTDNH
Sbjct: 286 PSLQGGPHENVIAGVAVALKEADSQEFKEYALQVKKNAAAIGNALMNKGYKLVTNGTDNH 345

Query: 289 MVLWDLRSLGLTGKNFEQVCEMCHITLNKITIFGDNGIITPGGVRIGTPAMTSRGCLESD 348
           ++LWDLR   LTG  FE+  ++ +IT+NK  + GD   I+PGG+RIG+ A+TSRG  E+D
Sbjct: 346 LILWDLRPKELTGNKFEKAADIANITVNKNAVHGDTNAISPGGIRIGSSALTSRGLKEAD 405

Query: 349 FEVIVEFLHIAAQIAIVVQREHGKLPKAFLRGLQSNNEVVELGYRVASFSAKFAMPGL 407
           FE I +FL     I++ +Q   GK    F+  +  + E+++L   V  FS+KF +PG+
Sbjct: 406 FEKIADFLDRIVSISLEIQGRVGKKLVDFVVEINKSKELLDLRKEVEEFSSKFTLPGI 457

[Close]

BLAST of Cp4.1LG14g03920 vs. TrEMBL
Match: A0A0A0LAD1_CUCSA (Serine hydroxymethyltransferase OS=Cucumis sativus GN=Csa_3G221750 PE=3 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 6.4e-119
Identity = 211/247 (85.43%), Postives = 227/247 (91.90%), Query Frame = 1


Query: 162 VCRAECVSPFGYCDVVTSTTHKSLRGPRGGIIFYRKGSKPRRRAMLLYQGNEANQYDFEE 221
           V   ECVSPF YCDVVTSTTHKSLRGPRGGIIFY+KG KPR RA++LYQGN+  +YDFEE
Sbjct: 339 VAAKECVSPFEYCDVVTSTTHKSLRGPRGGIIFYKKGYKPRGRAIVLYQGNDVKEYDFEE 398

Query: 222 KINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKAYMQQVKKNAQALASALLRKNYKLV 281
           +INFAVFPSLQGGPHNNHIAALAVALKQVATLEYK YMQQVKKNAQALASALLR+NYKLV
Sbjct: 399 RINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKGYMQQVKKNAQALASALLRRNYKLV 458

Query: 282 TGGTDNHMVLWDLRSLGLTGKNFEQVCEMCHITLNKITIFGDNGIITPGGVRIGTPAMTS 341
           TGGTDNHMVLWDLRSLGL+GKN EQ+CEMCHITLNKI I GDNG+IT GGVRIGTPAMTS
Sbjct: 459 TGGTDNHMVLWDLRSLGLSGKNLEQLCEMCHITLNKIIISGDNGVITTGGVRIGTPAMTS 518

Query: 342 RGCLESDFEVIVEFLHIAAQIAIVVQREHGKLPKAFLRGLQSNNEVVELGYRVASFSAKF 401
           RGCLESDFE+IVEFLH AAQIAI +QRE+GK+P AFL GLQSN EVVELG RV SFSAKF
Sbjct: 519 RGCLESDFELIVEFLHTAAQIAICIQREYGKMPNAFLTGLQSNKEVVELGNRVESFSAKF 578

Query: 402 AMPGLET 409
           +MPG+ET
Sbjct: 579 SMPGVET 585

[Close]

BLAST of Cp4.1LG14g03920 vs. TrEMBL
Match: A0A068TNP7_COFCA (Serine hydroxymethyltransferase OS=Coffea canephora GN=GSCOC_T00014951001 PE=3 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 4.2e-110
Identity = 193/246 (78.46%), Postives = 222/246 (90.24%), Query Frame = 1


Query: 162 VCRAECVSPFGYCDVVTSTTHKSLRGPRGGIIFYRKGSKPRRRAMLLYQGNEANQYDFEE 221
           V   E VSPF YCD+VTSTTHKSLRGPRGGIIFYRKGSKPR+R MLL QG+ +++YDFEE
Sbjct: 319 VAAKESVSPFDYCDIVTSTTHKSLRGPRGGIIFYRKGSKPRKRGMLLNQGDGSDRYDFEE 378

Query: 222 KINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKAYMQQVKKNAQALASALLRKNYKLV 281
           KINFAVFP+LQGGPHNNHIAALA+ALKQVAT EYKAYMQQVKKNAQALASALLR+N +LV
Sbjct: 379 KINFAVFPALQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRRNCRLV 438

Query: 282 TGGTDNHMVLWDLRSLGLTGKNFEQVCEMCHITLNKITIFGDNGIITPGGVRIGTPAMTS 341
           TGGTDNH++LWDLR+LGLTGKNFE+VCE+CH+TLNK+TIF DNG ITPGGVRIGTPAMTS
Sbjct: 439 TGGTDNHLLLWDLRTLGLTGKNFEKVCELCHVTLNKVTIFDDNGTITPGGVRIGTPAMTS 498

Query: 342 RGCLESDFEVIVEFLHIAAQIAIVVQREHGKLPKAFLRGLQSNNEVVELGYRVASFSAKF 401
           RGCLE+DFE I +FL  AAQIA  VQREHGKLPKAFL+GL++N +++EL   V SF+++F
Sbjct: 499 RGCLEADFETIADFLFRAAQIASSVQREHGKLPKAFLKGLENNKDIIELRTWVESFASQF 558

Query: 402 AMPGLE 408
           AMPG +
Sbjct: 559 AMPGFD 564

[Close]

BLAST of Cp4.1LG14g03920 vs. TrEMBL
Match: F6H906_VITVI (Serine hydroxymethyltransferase OS=Vitis vinifera GN=VIT_12s0034g02380 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.0e-108
Identity = 191/246 (77.64%), Postives = 218/246 (88.62%), Query Frame = 1


Query: 162 VCRAECVSPFGYCDVVTSTTHKSLRGPRGGIIFYRKGSKPRRRAMLLYQGNEANQYDFEE 221
           V   ECV+PF YCD+VTSTTHKSLRGPRGGIIFYRKG+KPR+R M+L QG++ + YD+EE
Sbjct: 331 VAAKECVNPFDYCDIVTSTTHKSLRGPRGGIIFYRKGTKPRKRGMILSQGDDNDHYDYEE 390

Query: 222 KINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKAYMQQVKKNAQALASALLRKNYKLV 281
           KINFAVFPSLQGGPHNNHIAALA+ALKQVAT EYKAYM QVKKNAQALASALLR+  +LV
Sbjct: 391 KINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMLQVKKNAQALASALLRRKCRLV 450

Query: 282 TGGTDNHMVLWDLRSLGLTGKNFEQVCEMCHITLNKITIFGDNGIITPGGVRIGTPAMTS 341
           TGGTDNH++LWDLR+LGLTGKN+E+VCEMCHITLNKI IFGDNG ITPGGVRIGTPAMTS
Sbjct: 451 TGGTDNHLLLWDLRTLGLTGKNYEKVCEMCHITLNKIAIFGDNGTITPGGVRIGTPAMTS 510

Query: 342 RGCLESDFEVIVEFLHIAAQIAIVVQREHGKLPKAFLRGLQSNNEVVELGYRVASFSAKF 401
           RGCLE+DFE I +FL  AAQIA VVQREHGK+ KAFL+GL+SN ++VEL  RV  F+ +F
Sbjct: 511 RGCLEADFETIADFLLRAAQIASVVQREHGKMQKAFLKGLESNKDIVELRTRVEIFATQF 570

Query: 402 AMPGLE 408
            MPG +
Sbjct: 571 VMPGFD 576

[Close]

BLAST of Cp4.1LG14g03920 vs. TrEMBL
Match: A0A022R708_ERYGU (Serine hydroxymethyltransferase OS=Erythranthe guttata GN=MIMGU_mgv1a003294mg PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 3.3e-107
Identity = 187/246 (76.02%), Postives = 219/246 (89.02%), Query Frame = 1


Query: 162 VCRAECVSPFGYCDVVTSTTHKSLRGPRGGIIFYRKGSKPRRRAMLLYQGNEANQYDFEE 221
           +   EC SPF YCD+VTSTTHKSLRGPRGGIIF+RKG KPR+R MLL QG+ +++YDFEE
Sbjct: 348 IAAKECASPFEYCDIVTSTTHKSLRGPRGGIIFFRKGPKPRKRGMLLNQGDGSDKYDFEE 407

Query: 222 KINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKAYMQQVKKNAQALASALLRKNYKLV 281
           KINFAVFP+LQGGPHNNHIAALA+ALKQVAT EYK YMQQVKKNAQALASALLR+N +L+
Sbjct: 408 KINFAVFPALQGGPHNNHIAALAIALKQVATPEYKMYMQQVKKNAQALASALLRRNCRLI 467

Query: 282 TGGTDNHMVLWDLRSLGLTGKNFEQVCEMCHITLNKITIFGDNGIITPGGVRIGTPAMTS 341
           TGGTDNHM+LWDLR+ GLTGKN E+VCE+C IT+NK+TIF DNG ITPGGVRIGTPAMTS
Sbjct: 468 TGGTDNHMLLWDLRNFGLTGKNLEKVCELCSITVNKVTIFDDNGNITPGGVRIGTPAMTS 527

Query: 342 RGCLESDFEVIVEFLHIAAQIAIVVQREHGKLPKAFLRGLQSNNEVVELGYRVASFSAKF 401
           RGCLESDFEV+ E++  AAQIA  VQREHGKLPK+FL+GL++N +++EL  RV SF+ +F
Sbjct: 528 RGCLESDFEVMAEYVLRAAQIATSVQREHGKLPKSFLKGLENNKDIIELRTRVESFAHQF 587

Query: 402 AMPGLE 408
           AMPGL+
Sbjct: 588 AMPGLD 593

[Close]

BLAST of Cp4.1LG14g03920 vs. TrEMBL
Match: A0A022QF12_ERYGU (Serine hydroxymethyltransferase OS=Erythranthe guttata GN=MIMGU_mgv1a0032522mg PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 3.3e-107
Identity = 184/254 (72.44%), Postives = 223/254 (87.80%), Query Frame = 1


Query: 154 ELIASENYVCRAECVSPFGYCDVVTSTTHKSLRGPRGGIIFYRKGSKPRRRAMLLYQGNE 213
           ++  +   +   EC SPF YCD+VTSTTHKSLRGPRGGIIF+RKG KP++R MLL QG+ 
Sbjct: 343 DMAQTSGLIAAKECASPFDYCDIVTSTTHKSLRGPRGGIIFFRKGQKPKKRGMLLTQGDA 402

Query: 214 ANQYDFEEKINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKAYMQQVKKNAQALASAL 273
           +++YDFEEKINFAVFP+LQGGPHNNHIAALA+ALKQVA+ EYK YMQ VK+NAQALASAL
Sbjct: 403 SDRYDFEEKINFAVFPALQGGPHNNHIAALAIALKQVASPEYKTYMQHVKRNAQALASAL 462

Query: 274 LRKNYKLVTGGTDNHMVLWDLRSLGLTGKNFEQVCEMCHITLNKITIFGDNGIITPGGVR 333
           LR+N +LVTGGTDNH++LWDLR+LGLTGKN E+VCE+C+ITLNK+TIF DNG ITPGGVR
Sbjct: 463 LRRNCRLVTGGTDNHLLLWDLRNLGLTGKNLEKVCELCYITLNKVTIFDDNGNITPGGVR 522

Query: 334 IGTPAMTSRGCLESDFEVIVEFLHIAAQIAIVVQREHGKLPKAFLRGLQSNNEVVELGYR 393
           IGTPAMT+RGC+E+DFE + EFL  AAQIA  VQREHGK+PK+FL+GL++N E+VEL  R
Sbjct: 523 IGTPAMTTRGCVEADFETMAEFLLRAAQIASTVQREHGKVPKSFLKGLENNKEIVELRAR 582

Query: 394 VASFSAKFAMPGLE 408
           V SFS++FAMPG++
Sbjct: 583 VESFSSQFAMPGID 596

[Close]

BLAST of Cp4.1LG14g03920 vs. TAIR10
Match: AT1G36370.1 (AT1G36370.1 serine hydroxymethyltransferase 7)

HSP 1 Score: 340.5 bits (872), Expect = 1.4e-93
Identity = 162/243 (66.67%), Postives = 196/243 (80.66%), Query Frame = 1


Query: 162 VCRAECVSPFGYCDVVTSTTHKSLRGPRGGIIFYRKGSKPRRRAMLLYQGNEANQYDFEE 221
           V   EC +PF +CD+VTSTTHK LRGPRGGIIFYR+G K R++       + +  YD EE
Sbjct: 349 VATKECSNPFDHCDIVTSTTHKGLRGPRGGIIFYRRGPKIRKQGHHSSHCDTSTHYDLEE 408

Query: 222 KINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKAYMQQVKKNAQALASALLRKNYKLV 281
           KINFAVFPSLQGGPHNNHIAALA+ALKQVAT EYKAY+QQ+KKNAQALA+ALLR+  +LV
Sbjct: 409 KINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYIQQMKKNAQALAAALLRRKCRLV 468

Query: 282 TGGTDNHMVLWDLRSLGLTGKNFEQVCEMCHITLNKITIFGDNGIITPGGVRIGTPAMTS 341
           TGGTDNH++LWDL  +GLTGK +E+VCEMCHITLNK  IFGDNG I+PGGVRIGTPAMT+
Sbjct: 469 TGGTDNHLLLWDLTPMGLTGKVYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTT 528

Query: 342 RGCLESDFEVIVEFLHIAAQIAIVVQREHGKLPKAFLRGLQSNNEVVELGYRVASFSAKF 401
           RGC+ESDFE + +FL  AAQI   +QREHGK  K F++ L +N ++ EL  RV +F+ ++
Sbjct: 529 RGCIESDFETMADFLIKAAQITSALQREHGKSHKEFVKSLCTNKDIAELRNRVEAFALQY 588

Query: 402 AMP 405
            MP
Sbjct: 589 EMP 591

[Close]

BLAST of Cp4.1LG14g03920 vs. TAIR10
Match: AT1G22020.1 (AT1G22020.1 serine hydroxymethyltransferase 6)

HSP 1 Score: 337.0 bits (863), Expect = 1.6e-92
Identity = 158/246 (64.23%), Postives = 198/246 (80.49%), Query Frame = 1


Query: 162 VCRAECVSPFGYCDVVTSTTHKSLRGPRGGIIFYRKGSKPRRRAMLLYQGNEANQYDFEE 221
           V   E  +PF YCD+VTSTTHKSLRGPRGGIIFY++G KP+++++ L       QYDFEE
Sbjct: 353 VAAKESPNPFDYCDIVTSTTHKSLRGPRGGIIFYKRGLKPKKQSINLNHCESNIQYDFEE 412

Query: 222 KINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKAYMQQVKKNAQALASALLRKNYKLV 281
           KINF+VFPSLQGGPHNNHIAALA+ALKQ A+ EYK YM+QVKKNA+ALASAL+ +  KL+
Sbjct: 413 KINFSVFPSLQGGPHNNHIAALAIALKQAASPEYKLYMRQVKKNAKALASALISRKCKLI 472

Query: 282 TGGTDNHMVLWDLRSLGLTGKNFEQVCEMCHITLNKITIFGDNGIITPGGVRIGTPAMTS 341
           TGGTDNH++LWDL  LGLTGK +E+VCEMCHIT+NK+ IF +NG+I+PGGVRIG+PAMTS
Sbjct: 473 TGGTDNHLLLWDLTPLGLTGKVYEKVCEMCHITVNKVAIFSENGVISPGGVRIGSPAMTS 532

Query: 342 RGCLESDFEVIVEFLHIAAQIAIVVQREHGKLPKAFLRGLQSNNEVVELGYRVASFSAKF 401
           RGCLE +FE + +FL+ AAQIA   QREHGKL K  L+ +    E+ +L  +V +F+ +F
Sbjct: 533 RGCLEPEFETMADFLYRAAQIASAAQREHGKLQKEPLKSIYHCKEIADLRNQVEAFATQF 592

Query: 402 AMPGLE 408
           AMP  +
Sbjct: 593 AMPAFD 598

[Close]

BLAST of Cp4.1LG14g03920 vs. TAIR10
Match: AT4G13890.1 (AT4G13890.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein)

HSP 1 Score: 287.0 bits (733), Expect = 1.9e-77
Identity = 141/244 (57.79%), Postives = 170/244 (69.67%), Query Frame = 1


Query: 162 VCRAECVSPFGYCDVVTSTTHKSLRGPRGGIIFYRKGSKPRRRAMLLYQGNEANQYDFEE 221
           V   E   PF YCDVVT++THKSLRGPR G+IFYRKG KP ++        E   YDF+ 
Sbjct: 223 VAAQEAADPFEYCDVVTTSTHKSLRGPRAGMIFYRKGPKPAKKGQ-----PEGEVYDFDA 282

Query: 222 KINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKAYMQQVKKNAQALASALLRKNYKLV 281
           KIN AVFP+LQ GPHNN I ALAVALKQV    +K Y +QVK NA  LAS L+ K Y LV
Sbjct: 283 KINSAVFPALQSGPHNNKIGALAVALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLV 342

Query: 282 TGGTDNHMVLWDLRSLGLTGKNFEQVCEMCHITLNKITIFGDNGIITPGGVRIGTPAMTS 341
           T GTDNH++LWDLR LGLTG   E+VCE+C+ITLN+  +FGD   + PGGVRIGTPAMTS
Sbjct: 343 TDGTDNHLILWDLRPLGLTGNKVEKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTS 402

Query: 342 RGCLESDFEVIVEFLHIAAQIAIVVQREHGKLPKAFLRGLQSNNEVVELGYRVASFSAKF 401
           RG +E DFE I EFLH A  I + +Q ++GK+ K F +GL +N E+ E+   V  F+  F
Sbjct: 403 RGLVEKDFEKIGEFLHRAVTITLDIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDF 461

Query: 402 AMPG 406
            MPG
Sbjct: 463 DMPG 461

[Close]

BLAST of Cp4.1LG14g03920 vs. TAIR10
Match: AT4G13930.1 (AT4G13930.1 serine hydroxymethyltransferase 4)

HSP 1 Score: 283.1 bits (723), Expect = 2.7e-76
Identity = 139/244 (56.97%), Postives = 174/244 (71.31%), Query Frame = 1


Query: 162 VCRAECVSPFGYCDVVTSTTHKSLRGPRGGIIFYRKGSKPRRRAMLLYQGNEANQYDFEE 221
           V   E  +PF YCDVVT+TTHKSLRGPR G+IFYRKG KP ++        E   YDFE+
Sbjct: 223 VAAQEAANPFEYCDVVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQ-----PEGAVYDFED 282

Query: 222 KINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKAYMQQVKKNAQALASALLRKNYKLV 281
           KINFAVFP+LQGGPHN+ I ALAVALKQ  T  +K Y +QVK NA AL + L+ K Y++V
Sbjct: 283 KINFAVFPALQGGPHNHQIGALAVALKQANTPGFKVYAKQVKANAVALGNYLMSKGYQIV 342

Query: 282 TGGTDNHMVLWDLRSLGLTGKNFEQVCEMCHITLNKITIFGDNGIITPGGVRIGTPAMTS 341
           T GT+NH+VLWDLR LGLTG   E++C++C ITLNK  +FGD+  + PGGVRIG PAMTS
Sbjct: 343 TNGTENHLVLWDLRPLGLTGNKVEKLCDLCSITLNKNAVFGDSSALAPGGVRIGAPAMTS 402

Query: 342 RGCLESDFEVIVEFLHIAAQIAIVVQREHGKLPKAFLRGLQSNNEVVELGYRVASFSAKF 401
           RG +E DFE I EFL  A  + + +Q+ +GKL K F +GL +N ++ +L   V  FSA +
Sbjct: 403 RGLVEKDFEQIGEFLSRAVTLTLDIQKTYGKLLKDFNKGLVNNKDLDQLKADVEKFSASY 461

Query: 402 AMPG 406
            MPG
Sbjct: 463 EMPG 461

[Close]

BLAST of Cp4.1LG14g03920 vs. TAIR10
Match: AT4G37930.1 (AT4G37930.1 serine transhydroxymethyltransferase 1)

HSP 1 Score: 228.0 bits (580), Expect = 1.0e-59
Identity = 124/267 (46.44%), Postives = 165/267 (61.80%), Query Frame = 1


Query: 146 KQRQIKGIELIASENYVCRAECVSPFGYCDVVTSTTHKSLRGPRGGIIFYRKGSKPRRRA 205
           KQ+ +   ++      V      SPF Y DVVT+TTHKSLRGPRG +IF+RKG K   + 
Sbjct: 249 KQKAVMLADMAHISGLVAANVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEINK- 308

Query: 206 MLLYQGNEANQYDFEEKINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKAYMQQVKKN 265
               QG E   YDFE+KIN AVFP LQGGPHN+ I  LAVALKQ  T EYKAY +QV  N
Sbjct: 309 ----QGKEV-LYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKAYQEQVLSN 368

Query: 266 AQALASALLRKNYKLVTGGTDNHMVLWDLRSLGLTGKNFEQVCEMCHITLNKITIFGDNG 325
           +   A  L+ + Y+LV+GGTDNH+VL +L+  G+ G   E+V E  HI  NK T+ GD  
Sbjct: 369 SAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNTVPGDVS 428

Query: 326 IITPGGVRIGTPAMTSRGCLESDFEVIVEFLHIAAQIAIVVQRE-HGKLPKAFLRGLQSN 385
            + PGG+R+GTPA+TSRG +E DF  + E+   A  IA+ V+ E  G   K F+  ++S+
Sbjct: 429 AMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKDFVSAMESS 488

Query: 386 ----NEVVELGYRVASFSAKFAMPGLE 408
               +E+ +L + V  F+ +F   G E
Sbjct: 489 STIQSEIAKLRHEVEEFAKQFPTIGFE 509

[Close]

BLAST of Cp4.1LG14g03920 vs. NCBI nr
Match: gi|449457095|ref|XP_004146284.1| (PREDICTED: serine hydroxymethyltransferase 7-like [Cucumis sativus])

HSP 1 Score: 435.6 bits (1119), Expect = 9.2e-119
Identity = 211/247 (85.43%), Postives = 227/247 (91.90%), Query Frame = 1


Query: 162 VCRAECVSPFGYCDVVTSTTHKSLRGPRGGIIFYRKGSKPRRRAMLLYQGNEANQYDFEE 221
           V   ECVSPF YCDVVTSTTHKSLRGPRGGIIFY+KG KPR RA++LYQGN+  +YDFEE
Sbjct: 339 VAAKECVSPFEYCDVVTSTTHKSLRGPRGGIIFYKKGYKPRGRAIVLYQGNDVKEYDFEE 398

Query: 222 KINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKAYMQQVKKNAQALASALLRKNYKLV 281
           +INFAVFPSLQGGPHNNHIAALAVALKQVATLEYK YMQQVKKNAQALASALLR+NYKLV
Sbjct: 399 RINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKGYMQQVKKNAQALASALLRRNYKLV 458

Query: 282 TGGTDNHMVLWDLRSLGLTGKNFEQVCEMCHITLNKITIFGDNGIITPGGVRIGTPAMTS 341
           TGGTDNHMVLWDLRSLGL+GKN EQ+CEMCHITLNKI I GDNG+IT GGVRIGTPAMTS
Sbjct: 459 TGGTDNHMVLWDLRSLGLSGKNLEQLCEMCHITLNKIIISGDNGVITTGGVRIGTPAMTS 518

Query: 342 RGCLESDFEVIVEFLHIAAQIAIVVQREHGKLPKAFLRGLQSNNEVVELGYRVASFSAKF 401
           RGCLESDFE+IVEFLH AAQIAI +QRE+GK+P AFL GLQSN EVVELG RV SFSAKF
Sbjct: 519 RGCLESDFELIVEFLHTAAQIAICIQREYGKMPNAFLTGLQSNKEVVELGNRVESFSAKF 578

Query: 402 AMPGLET 409
           +MPG+ET
Sbjct: 579 SMPGVET 585

[Close]

BLAST of Cp4.1LG14g03920 vs. NCBI nr
Match: gi|659112103|ref|XP_008456065.1| (PREDICTED: serine hydroxymethyltransferase 7-like [Cucumis melo])

HSP 1 Score: 434.9 bits (1117), Expect = 1.6e-118
Identity = 210/247 (85.02%), Postives = 227/247 (91.90%), Query Frame = 1


Query: 162 VCRAECVSPFGYCDVVTSTTHKSLRGPRGGIIFYRKGSKPRRRAMLLYQGNEANQYDFEE 221
           V   EC SPF YCDVVTSTTHKSLRGPRGGIIFY+KG KPR RA++LYQGN+  +YDFEE
Sbjct: 339 VAAKECASPFEYCDVVTSTTHKSLRGPRGGIIFYKKGYKPRGRAIVLYQGNDVKEYDFEE 398

Query: 222 KINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKAYMQQVKKNAQALASALLRKNYKLV 281
           +INFAVFPSLQGGPHNNHIAALAVAL+QVAT EYKAYMQQVKKNAQALASALLR+NYKLV
Sbjct: 399 RINFAVFPSLQGGPHNNHIAALAVALRQVATPEYKAYMQQVKKNAQALASALLRRNYKLV 458

Query: 282 TGGTDNHMVLWDLRSLGLTGKNFEQVCEMCHITLNKITIFGDNGIITPGGVRIGTPAMTS 341
           TGGTDNHMVLWDLRSLGL+GKN EQ+CEMCHITLNKI IFGDNG+IT GGVRIGTPAMTS
Sbjct: 459 TGGTDNHMVLWDLRSLGLSGKNLEQLCEMCHITLNKIIIFGDNGVITTGGVRIGTPAMTS 518

Query: 342 RGCLESDFEVIVEFLHIAAQIAIVVQREHGKLPKAFLRGLQSNNEVVELGYRVASFSAKF 401
           RGCLESDFE+IVEFLH AAQIAI +QRE+GK+P AFL G+QSN EVVELG RV SFSAKF
Sbjct: 519 RGCLESDFELIVEFLHTAAQIAICIQREYGKMPNAFLTGVQSNKEVVELGNRVESFSAKF 578

Query: 402 AMPGLET 409
           AMPG+ET
Sbjct: 579 AMPGVET 585

[Close]

BLAST of Cp4.1LG14g03920 vs. NCBI nr
Match: gi|661899575|emb|CDO97569.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 406.4 bits (1043), Expect = 6.0e-110
Identity = 193/246 (78.46%), Postives = 222/246 (90.24%), Query Frame = 1


Query: 162 VCRAECVSPFGYCDVVTSTTHKSLRGPRGGIIFYRKGSKPRRRAMLLYQGNEANQYDFEE 221
           V   E VSPF YCD+VTSTTHKSLRGPRGGIIFYRKGSKPR+R MLL QG+ +++YDFEE
Sbjct: 319 VAAKESVSPFDYCDIVTSTTHKSLRGPRGGIIFYRKGSKPRKRGMLLNQGDGSDRYDFEE 378

Query: 222 KINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKAYMQQVKKNAQALASALLRKNYKLV 281
           KINFAVFP+LQGGPHNNHIAALA+ALKQVAT EYKAYMQQVKKNAQALASALLR+N +LV
Sbjct: 379 KINFAVFPALQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRRNCRLV 438

Query: 282 TGGTDNHMVLWDLRSLGLTGKNFEQVCEMCHITLNKITIFGDNGIITPGGVRIGTPAMTS 341
           TGGTDNH++LWDLR+LGLTGKNFE+VCE+CH+TLNK+TIF DNG ITPGGVRIGTPAMTS
Sbjct: 439 TGGTDNHLLLWDLRTLGLTGKNFEKVCELCHVTLNKVTIFDDNGTITPGGVRIGTPAMTS 498

Query: 342 RGCLESDFEVIVEFLHIAAQIAIVVQREHGKLPKAFLRGLQSNNEVVELGYRVASFSAKF 401
           RGCLE+DFE I +FL  AAQIA  VQREHGKLPKAFL+GL++N +++EL   V SF+++F
Sbjct: 499 RGCLEADFETIADFLFRAAQIASSVQREHGKLPKAFLKGLENNKDIIELRTWVESFASQF 558

Query: 402 AMPGLE 408
           AMPG +
Sbjct: 559 AMPGFD 564

[Close]

BLAST of Cp4.1LG14g03920 vs. NCBI nr
Match: gi|298204484|emb|CBI23759.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 401.7 bits (1031), Expect = 1.5e-108
Identity = 191/246 (77.64%), Postives = 218/246 (88.62%), Query Frame = 1


Query: 162 VCRAECVSPFGYCDVVTSTTHKSLRGPRGGIIFYRKGSKPRRRAMLLYQGNEANQYDFEE 221
           V   ECV+PF YCD+VTSTTHKSLRGPRGGIIFYRKG+KPR+R M+L QG++ + YD+EE
Sbjct: 99  VAAKECVNPFDYCDIVTSTTHKSLRGPRGGIIFYRKGTKPRKRGMILSQGDDNDHYDYEE 158

Query: 222 KINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKAYMQQVKKNAQALASALLRKNYKLV 281
           KINFAVFPSLQGGPHNNHIAALA+ALKQVAT EYKAYM QVKKNAQALASALLR+  +LV
Sbjct: 159 KINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMLQVKKNAQALASALLRRKCRLV 218

Query: 282 TGGTDNHMVLWDLRSLGLTGKNFEQVCEMCHITLNKITIFGDNGIITPGGVRIGTPAMTS 341
           TGGTDNH++LWDLR+LGLTGKN+E+VCEMCHITLNKI IFGDNG ITPGGVRIGTPAMTS
Sbjct: 219 TGGTDNHLLLWDLRTLGLTGKNYEKVCEMCHITLNKIAIFGDNGTITPGGVRIGTPAMTS 278

Query: 342 RGCLESDFEVIVEFLHIAAQIAIVVQREHGKLPKAFLRGLQSNNEVVELGYRVASFSAKF 401
           RGCLE+DFE I +FL  AAQIA VVQREHGK+ KAFL+GL+SN ++VEL  RV  F+ +F
Sbjct: 279 RGCLEADFETIADFLLRAAQIASVVQREHGKMQKAFLKGLESNKDIVELRTRVEIFATQF 338

Query: 402 AMPGLE 408
            MPG +
Sbjct: 339 VMPGFD 344

[Close]

BLAST of Cp4.1LG14g03920 vs. NCBI nr
Match: gi|747080922|ref|XP_011087728.1| (PREDICTED: serine hydroxymethyltransferase 6-like [Sesamum indicum])

HSP 1 Score: 401.7 bits (1031), Expect = 1.5e-108
Identity = 188/254 (74.02%), Postives = 222/254 (87.40%), Query Frame = 1


Query: 154 ELIASENYVCRAECVSPFGYCDVVTSTTHKSLRGPRGGIIFYRKGSKPRRRAMLLYQGNE 213
           ++  +   +   EC SPF YCD++TSTTHKSLRGPRGGIIFYRKG KP++R MLL QG+ 
Sbjct: 347 DMAQTSGLIAAKECASPFEYCDIITSTTHKSLRGPRGGIIFYRKGPKPKKRGMLLSQGDG 406

Query: 214 ANQYDFEEKINFAVFPSLQGGPHNNHIAALAVALKQVATLEYKAYMQQVKKNAQALASAL 273
           +++YDFEEKINFAVFP+LQGGPHNNHIAALA+ALKQVA  EYK YMQQVKKNA+ALASAL
Sbjct: 407 SDRYDFEEKINFAVFPALQGGPHNNHIAALAIALKQVAAPEYKTYMQQVKKNAKALASAL 466

Query: 274 LRKNYKLVTGGTDNHMVLWDLRSLGLTGKNFEQVCEMCHITLNKITIFGDNGIITPGGVR 333
           LR+N +LVTGGTDNH++LWDLR+ GLTGKNFE+VCE CHITLNK+TIF DNG ITPGGVR
Sbjct: 467 LRRNCRLVTGGTDNHLLLWDLRNFGLTGKNFEKVCEFCHITLNKVTIFDDNGNITPGGVR 526

Query: 334 IGTPAMTSRGCLESDFEVIVEFLHIAAQIAIVVQREHGKLPKAFLRGLQSNNEVVELGYR 393
           IGTPAMTSRGCLE+DFE++ EFL  AAQIA  VQREHGKLPK+FL+GL++N E+VEL  R
Sbjct: 527 IGTPAMTSRGCLEADFEMMAEFLLRAAQIASSVQREHGKLPKSFLKGLENNKEIVELRMR 586

Query: 394 VASFSAKFAMPGLE 408
           V SF+++FAMPG +
Sbjct: 587 VESFASQFAMPGFD 600

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g03920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GLYC7_ARATH	2.5e-92	66.67	Serine hydroxymethyltransferase 7 OS=Arabidopsis thaliana GN=SHM7 PE=2 SV=1	[more]
GLYC6_ARATH	2.8e-91	64.23	Serine hydroxymethyltransferase 6 OS=Arabidopsis thaliana GN=SHM6 PE=2 SV=1	[more]
GLYC5_ARATH	3.3e-76	57.79	Serine hydroxymethyltransferase 5 OS=Arabidopsis thaliana GN=SHM5 PE=3 SV=1	[more]
GLYC4_ARATH	4.8e-75	56.97	Serine hydroxymethyltransferase 4 OS=Arabidopsis thaliana GN=SHM4 PE=1 SV=1	[more]
GLYC1_DICDI	2.4e-66	52.52	Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum GN=shmt1 PE=1 SV=1	[more]

BLAST of Cp4.1LG14g03920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAD1_CUCSA	6.4e-119	85.43	Serine hydroxymethyltransferase OS=Cucumis sativus GN=Csa_3G221750 PE=3 SV=1	[more]
A0A068TNP7_COFCA	4.2e-110	78.46	Serine hydroxymethyltransferase OS=Coffea canephora GN=GSCOC_T00014951001 PE=3 S...	[more]
F6H906_VITVI	1.0e-108	77.64	Serine hydroxymethyltransferase OS=Vitis vinifera GN=VIT_12s0034g02380 PE=3 SV=1	[more]
A0A022R708_ERYGU	3.3e-107	76.02	Serine hydroxymethyltransferase OS=Erythranthe guttata GN=MIMGU_mgv1a003294mg PE...	[more]
A0A022QF12_ERYGU	3.3e-107	72.44	Serine hydroxymethyltransferase OS=Erythranthe guttata GN=MIMGU_mgv1a0032522mg P...	[more]

BLAST of Cp4.1LG14g03920 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G36370.1	1.4e-93	66.67	serine hydroxymethyltransferase 7	[more]
AT1G22020.1	1.6e-92	64.23	serine hydroxymethyltransferase 6	[more]
AT4G13890.1	1.9e-77	57.79	Pyridoxal phosphate (PLP)-dependent transferases superfamily protein	[more]
AT4G13930.1	2.7e-76	56.97	serine hydroxymethyltransferase 4	[more]
AT4G37930.1	1.0e-59	46.44	serine transhydroxymethyltransferase 1	[more]

BLAST of Cp4.1LG14g03920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457095\|ref\|XP_004146284.1\|	9.2e-119	85.43	PREDICTED: serine hydroxymethyltransferase 7-like [Cucumis sativus]	[more]
gi\|659112103\|ref\|XP_008456065.1\|	1.6e-118	85.02	PREDICTED: serine hydroxymethyltransferase 7-like [Cucumis melo]	[more]
gi\|661899575\|emb\|CDO97569.1\|	6.0e-110	78.46	unnamed protein product [Coffea canephora]	[more]
gi\|298204484\|emb\|CBI23759.3\|	1.5e-108	77.64	unnamed protein product [Vitis vinifera]	[more]
gi\|747080922\|ref\|XP_011087728.1\|	1.5e-108	74.02	PREDICTED: serine hydroxymethyltransferase 6-like [Sesamum indicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0030170	pyridoxal phosphate binding
GO:0004372	glycine hydroxymethyltransferase activity
GO:0003824	catalytic activity
GO:0016740	transferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006563	L-serine metabolic process
GO:0006544	glycine metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR019798	Ser_HO-MeTrfase_PLP_BS
IPR019775	WD40_repeat_CS
IPR015424	PyrdxlP-dep_Trfase
IPR015422	PyrdxlP-dep_Trfase_dom1
IPR015421	PyrdxlP-dep_Trfase_major
IPR001085	Ser_HO-MeTrfase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006544	glycine metabolic process
biological_process	GO:0006563	L-serine metabolic process
biological_process	GO:0032259	methylation
biological_process	GO:0035999	tetrahydrofolate interconversion
biological_process	GO:0019264	glycine biosynthetic process from serine
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004372	glycine hydroxymethyltransferase activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g03920.1	Cp4.1LG14g03920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001085	Serine hydroxymethyltransferase	PANTHER	PTHR11680	SERINE HYDROXYMETHYLTRANSFERASE	coord: 166..407 score: 4.0E
IPR001085	Serine hydroxymethyltransferase	PFAM	PF00464	SHMT	coord: 168..355 score: 1.4E-68coord: 132..165 score: 7.
IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1	GENE3D	G3DSA:3.40.640.10		coord: 164..256 score: 1.9
IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GENE3D	G3DSA:3.90.1150.10		coord: 257..406 score: 5.1
IPR015424	Pyridoxal phosphate-dependent transferase	unknown	SSF53383	PLP-dependent transferases	coord: 168..405 score: 5.2E-71coord: 126..164 score: 7.2
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 280..294 scor
IPR019798	Serine hydroxymethyltransferase, pyridoxal phosphate binding site	PROSITE	PS00096	SHMT	coord: 175..191 scor
None	No IPR available	PANTHER	PTHR11680:SF7	SERINE HYDROXYMETHYLTRANSFERASE 6-RELATED	coord: 166..407 score: 4.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG14g03920	Cucsa.032990	Cucumber (Gy14) v1	cgycpeB0005
Cp4.1LG14g03920	CmoCh16G004150	Cucurbita moschata (Rifu)	cmocpeB307
Cp4.1LG14g03920	Lsi05G001710	Bottle gourd (USVL1VR-Ls)	cpelsiB177
Cp4.1LG14g03920	Lsi07G003160	Bottle gourd (USVL1VR-Ls)	cpelsiB188
Cp4.1LG14g03920	CsGy3G018960	Cucumber (Gy14) v2	cgybcpeB317
Cp4.1LG14g03920	Carg11313	Silver-seed gourd	carcpeB0926

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG14g03920	Cucurbita moschata (Rifu)	cmocpeB668
Cp4.1LG14g03920	Wild cucumber (PI 183967)	cpecpiB208
Cp4.1LG14g03920	Cucumber (Chinese Long) v2	cpecuB205
Cp4.1LG14g03920	Bottle gourd (USVL1VR-Ls)	cpelsiB171
Cp4.1LG14g03920	Watermelon (Charleston Gray)	cpewcgB208
Cp4.1LG14g03920	Watermelon (97103) v1	cpewmB228
Cp4.1LG14g03920	Melon (DHL92) v3.5.1	cpemeB192
Cp4.1LG14g03920	Melon (DHL92) v3.6.1	cpemedB234
Cp4.1LG14g03920	Silver-seed gourd	carcpeB0059
Cp4.1LG14g03920	Cucumber (Chinese Long) v3	cpecucB0247
Cp4.1LG14g03920	Wax gourd	cpewgoB0295
Cp4.1LG14g03920	Cucurbita pepo (Zucchini)	cpecpeB234
Cp4.1LG14g03920	Cucurbita maxima (Rimu)	cmacpeB344
Cp4.1LG14g03920	Cucurbita maxima (Rimu)	cmacpeB715