Cp4.1LG14g01780 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACATTACCAGAACCAGTACAGCGCACAATCTGGCGCCGACCAGTACGGCAACCCAATTCGCCAGACCGATGAATACGGCAACGTCATTTCCGACACCGCACAGCACGTCGACCCACTTCGCCGGACGGACGAATTCCGTGGGACCGACCAGTATGGCAACCCAATTCATCGGACCGACCAGCACGGTGTCGGTGACCCAACTGGACGCACTGGCACAGGCACTGGCACTGGAATGTATGAAGGAGGCGGCGGAGGGCAGCAGCAGCAGCAGAGGGGTGGAATGTTTCATCATGATAAGCCGGTATCGACGGGGGGATCGGTCGGGTACACGACGGGGGAGCAGGGGGAGCGTCATGAGAAGAAAGGGATGATGGAGAAGATTAAGGAGAAGCTTCCGGGAGGAAACCAATGA ATGGCACATTACCAGAACCAGTACAGCGCACAATCTGGCGCCGACCAGTACGGCAACCCAATTCGCCAGACCGATGAATACGGCAACGTCATTTCCGACACCGCACAGCACGTCGACCCACTTCGCCGGACGGACGAATTCCGTGGGACCGACCAGTATGGCAACCCAATTCATCGGACCGACCAGCACGGTGTCGGTGACCCAACTGGACGCACTGGCACAGGCACTGGCACTGGAATGTATGAAGGAGGCGGCGGAGGGCAGCAGCAGCAGCAGAGGGGTGGAATGTTTCATCATGATAAGCCGGTATCGACGGGGGGATCGGTCGGGTACACGACGGGGGAGCAGGGGGAGCGTCATGAGAAGAAAGGGATGATGGAGAAGATTAAGGAGAAGCTTCCGGGAGGAAACCAATGA ATGGCACATTACCAGAACCAGTACAGCGCACAATCTGGCGCCGACCAGTACGGCAACCCAATTCGCCAGACCGATGAATACGGCAACGTCATTTCCGACACCGCACAGCACGTCGACCCACTTCGCCGGACGGACGAATTCCGTGGGACCGACCAGTATGGCAACCCAATTCATCGGACCGACCAGCACGGTGTCGGTGACCCAACTGGACGCACTGGCACAGGCACTGGCACTGGAATGTATGAAGGAGGCGGCGGAGGGCAGCAGCAGCAGCAGAGGGGTGGAATGTTTCATCATGATAAGCCGGTATCGACGGGGGGATCGGTCGGGTACACGACGGGGGAGCAGGGGGAGCGTCATGAGAAGAAAGGGATGATGGAGAAGATTAAGGAGAAGCTTCCGGGAGGAAACCAATGA MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQHVDPLRRTDEFRGTDQYGNPIHRTDQHGVGDPTGRTGTGTGTGMYEGGGGGQQQQQRGGMFHHDKPVSTGGSVGYTTGEQGERHEKKGMMEKIKEKLPGGNQ
BLAST of Cp4.1LG14g01780 vs. Swiss-Prot
Match: DHN2_PEA (Dehydrin DHN2 OS=Pisum sativum GN=DHN2 PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.6e-09 Identity = 57/143 (39.86%), Postives = 70/143 (48.95%), Query Frame = 1
BLAST of Cp4.1LG14g01780 vs. Swiss-Prot
Match: DHN3_PEA (Dehydrin DHN3 OS=Pisum sativum GN=DHN3 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 4.5e-09 Identity = 58/162 (35.80%), Postives = 72/162 (44.44%), Query Frame = 1
BLAST of Cp4.1LG14g01780 vs. Swiss-Prot
Match: DHN1_AVIMR (Dehydrin DHN1 OS=Avicennia marina GN=DHN1 PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 5.9e-09 Identity = 62/150 (41.33%), Postives = 74/150 (49.33%), Query Frame = 1
BLAST of Cp4.1LG14g01780 vs. Swiss-Prot
Match: DHN1_PEA (Dehydrin DHN1 OS=Pisum sativum GN=DHN1 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 5.9e-09 Identity = 56/144 (38.89%), Postives = 69/144 (47.92%), Query Frame = 1
BLAST of Cp4.1LG14g01780 vs. TrEMBL
Match: A0A0A0KWM9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G045040 PE=3 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 5.3e-25 Identity = 86/182 (47.25%), Postives = 97/182 (53.30%), Query Frame = 1
BLAST of Cp4.1LG14g01780 vs. TrEMBL
Match: A0A0A0KUH6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G045050 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.5e-22 Identity = 70/138 (50.72%), Postives = 82/138 (59.42%), Query Frame = 1
BLAST of Cp4.1LG14g01780 vs. TrEMBL
Match: M4XZ04_RHOCT (Dehydrin 1 OS=Rhododendron catawbiense GN=Dhn1 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 2.3e-12 Identity = 60/133 (45.11%), Postives = 71/133 (53.38%), Query Frame = 1
BLAST of Cp4.1LG14g01780 vs. TrEMBL
Match: B7U647_CAMSI (Dehydrin OS=Camellia sinensis PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 3.7e-10 Identity = 63/154 (40.91%), Postives = 77/154 (50.00%), Query Frame = 1
BLAST of Cp4.1LG14g01780 vs. TrEMBL
Match: B5TV66_CAMSI (Putative dehydrin OS=Camellia sinensis PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 3.7e-10 Identity = 63/154 (40.91%), Postives = 77/154 (50.00%), Query Frame = 1
BLAST of Cp4.1LG14g01780 vs. TAIR10
Match: AT5G66400.1 (AT5G66400.1 Dehydrin family protein) HSP 1 Score: 50.8 bits (120), Expect = 7.6e-07 Identity = 57/148 (38.51%), Postives = 69/148 (46.62%), Query Frame = 1
BLAST of Cp4.1LG14g01780 vs. NCBI nr
Match: gi|659102400|ref|XP_008452109.1| (PREDICTED: dehydrin DHN1 [Cucumis melo]) HSP 1 Score: 126.3 bits (316), Expect = 4.1e-26 Identity = 86/182 (47.25%), Postives = 98/182 (53.85%), Query Frame = 1
BLAST of Cp4.1LG14g01780 vs. NCBI nr
Match: gi|778690692|ref|XP_011653150.1| (PREDICTED: dehydrin DHN1-like [Cucumis sativus]) HSP 1 Score: 122.1 bits (305), Expect = 7.7e-25 Identity = 86/182 (47.25%), Postives = 97/182 (53.30%), Query Frame = 1
BLAST of Cp4.1LG14g01780 vs. NCBI nr
Match: gi|778697508|ref|XP_011654339.1| (PREDICTED: late embryogenesis abundant protein D-11-like [Cucumis sativus]) HSP 1 Score: 114.0 bits (284), Expect = 2.1e-22 Identity = 70/138 (50.72%), Postives = 82/138 (59.42%), Query Frame = 1
BLAST of Cp4.1LG14g01780 vs. NCBI nr
Match: gi|472278804|gb|AGI37442.1| (dehydrin 1 [Rhododendron catawbiense]) HSP 1 Score: 80.1 bits (196), Expect = 3.3e-12 Identity = 60/133 (45.11%), Postives = 71/133 (53.38%), Query Frame = 1
BLAST of Cp4.1LG14g01780 vs. NCBI nr
Match: gi|1009144621|ref|XP_015889901.1| (PREDICTED: dehydrin DHN1 [Ziziphus jujuba]) HSP 1 Score: 79.0 bits (193), Expect = 7.4e-12 Identity = 64/143 (44.76%), Postives = 76/143 (53.15%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |