Cp4.1LG14g01760 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTGGTCTCTCCCGCAACTTCTCCACAGTCTGCAAGCTTAGTCATTTACAGCCCAGCCAGACACAGGCGACGTCAAATTTCATACCCTTTTCTCAGCTTCAACAGCAGCGGAAGCTCTTAGAATGGCGACTCATAAGTATTCTCCACGACTGCACGGACTTTTCTCAAATCAAGCAAGTTCATGGCCAAATCATTTGCAATGGCTTGAGTCAATGCTCTTACGTCCTCACCAAACTCATTCGCATGCTTTCGAAGGTAGATGTCCCAATGGATTGCTACCCACGTCTGGTTTTTGGACAGGTTAATTACCCCAACCCCTTTCTTTGGACTGCCATGATTCGTGGGTATGCCCTTCAAGGACCCTTCACTGAGTCTATTAACTTGTATACTAACATGAGGAGAAATGGCGTCAGTCCTGTTTCGTTTACGTTTTCTGCGCTTTTTAAGGCTTGTGGGGCTTCTCTTAATTTGGATTTGGGTAGGCAGGTGCATGCTCAGACGATTTTGATTGGGGGTTTCGCTTCTGATTTATATGTTGGTAATACGATGATTGATATGTATGTGAAATGTGGGGTTTTGGGTTGTGGGCGGAAGGTGTTCGATGAAATGTCTGAGAGAGATGTGGTTTCATGGACTGAGCTGATTGTTGCGTATGCGAAGTTTGGGGACATGGAATCTGCTAGGGGCCTGTTTGATGAATTGCCTTTGAAGGATATGGTGGCATGGACTGCAATGGTCACTGGTTATGCCCAAAATGCTAGACCAAAGGAGGCATTGGAGTATTTTCAGAAGATGCAGGATGTCGGTATCGAGACCGATGAAGTTACACTTGTTGGTGTCATCTCAGCCTGTGCACAATTGGGTGCAGTTAAATATGCTAACTGGATTAGAGACATTGCTGAAAGATCAGGCTTTGGATCTTATGAAAATGTAATGGTGGGATCTGCTCTTATCGATATGTATTCTAAATGTGGCAGTCCTGATGAGGCATACAAAGTTTTTGAAGGAATGAAGGAAAGAAATGTGTTCTCGTATAGTTCAATGATTGTGGGATACGCTATGCATGGTCGCGCTCATTCCGCTTTGCAGTTGTTCCATGAGATGTTAAAGACTGAGATCACGCCAAATAAGGTTACTTTCATTGGGGTGCTTTCAGCGTGTAGCCATGCCGGTATGGTCGAACAAGGTCGACAGCTATTTGCTAAGATGGAAAAGTATTTTAACGTAACGCCTTCACCCGATCATTATGCGTGTATGGTTGATCTCCTTGGTCGAGGTGGATGTTTGGAAGAAGCTCTTGAACTCATTGAAACCATGCCAATGGAACCCCATGGAGGTGTATGGGGAGCACTGCTTGGAGCTTGCCGCATCCATGGGAATCCCGACATTGCTCGGGTAGCTGCCGATCAATTATTCAAGCTAGAACCAGATGGTATAGGGAACTACATTCTGCTATCGAACATATATGCATCAGCAGGAAGATGGGACGAGGTGTCGAAATTACGGAAAGTGATTCGAGCCAAAGGCTTAAAGAAGAATCCTGGCTGCAGCTGGTTTGAAGGAAAGAAAGGGGACATTCACGAATTCTTTGCGGATGATGCAACCCATCAACGATCAAGTGAGATTAGACAAGCCTTGAGGCAACTCCTTGAGAGATTAAGAGCCCATGGATACAAGCCAAACTTGAGCTCTGTGCCTTATGACTTGACCGATGACGAAAAGGAACGAATACTGATGAGTCATAGTGAGAAGCTGGCGTTGGCATACGGGCTGTTATGTACTGAGGCAGGGGAAACCATTACGATCATGAAAAACCTTAGGATATGCGAGGATTGCCACAATGTCATGTGTGCTGCATCTGAAATCACTGGAAGGGAGATCATTATAAGGGATAACATGAGATTTCATCACTTCCACAATGGGACTTGTTCTTGTGGTAACTTTTGGTGATCCAAGCCAGAGCCCTCTTAATTCCTTGCGCTTTCATCGCCTGCTAATGCTTATTGTTGATCAATCATCAAGTTCCGACAGGTATCAGAAATTCTTCTTCTTCTTGTTCTTCAATTGTAGTTGGCTTGTTGTTGAAATCCGTTCAGTTTCCTCTGTCACTCAAAAATTTTGTATTTTATATGGTGAAAATTAAGGAATGTGAAAACACGACGTGTAGCCTTAGTACCGAAAGAAATTTAAATCTCAATGGACTCAGTCTGTAAGACGAATTGGCTTTATGTACCATGTACCAAAAACAAAGGATGGTTTGGATGGTTTGGATGGTTTAGAGAAGAGAGTCCACATTGGCTGATGAATAGGGTCGATCATCCGTTCATATCAGTTCATAGATAAGGAATATATCTCTAGGTACATTTGAGAAAATTAAAAGAAATACCATGAAAGCTTATACTCATGGACAATATCATATAATTACAGAGAGTCGCGATTCCTAGCATAGTATTAGAATTATACTCCTTTGAGAAAATTAAAAGAAATACCATGAAAGCTTATACTCATGGACAAATATCATATAATGATAGAGAGTCGCGATTCCTAGCATAGTATTAGAATTATACTCCTAAGTTAGTCATGTCAATAGAATCTCGAAGGTGTAGTCAAAAGTAATTCAAGTATCAGACGAAAGGTATACTCCGGACACTTTAGAAGAAGTCGAGCCTCGATTAAGGAGAGGATGTTCGAAAACTCCTCAATGATTACTTTGTTTGAGAGGAAGATTGTTACTAAGAGAAGCATTTCATATATTGACTAATTAAGAAGTTGATCGAGATGGATCTTGTAAATCTTTTTCGACTTTTTATCTTTTTTTTATCTTTTTTTTATGTTCACTTGATTCCTTCCCATTATTCAGTTCATATCTTTTTAGAATGAAGTTTGATCCCATTAATTCAGTTCATATCTTTTTAGGATGAAGTTTTTGATCAAAATAACTATCATGATGTGATTATGGCCTCTTCTCTTTGAGTTCATATTTGGTTAACATTGTTGTGTTCTACATTCACTTCACGTTAAACTTGAGACCGTGTAATCCATCAGGGGAAGGCGTCTTGTACGACATGTGGCATTCGAATCCACCGTAGCATGCAGGGAGACGTCGGTAATGGAGATTAGCTTGCACTTCAGTTTGCCAAATGAAGTGTTCTTGGTGGATGTTACCAGGTTTGAGACCCTGTAAATCTTTTAAGTTTTCGATATTTTTTTAAGTATTTATTGAAACTTCTTACTATTATTAGCATAACTTCATAATTTCACGTTCGAAGTAGACAAAAAACAGCGACAAAACACATAAATTACTTAATAATACACAGACACTCACGACCCTTGATCATTATTTAGTCACATACAGGCAGGCAGCTCTACAAGCTAACAAGCCGCCATGTCCTTTGCTGCTTCTCTACTAATTAAACACACAGCCTCCTCATTGGTTTCCTCCCGGAAGCTTCTCCTTAATCTTCTCCATCATCCCTTTCTTCTCATGACGCTCCCCCTGCTCCCCCGTCGTGTACCCGACCGATCCCCCCGTCGATACCGGCTTATCATGATGAAACATTCCACCCCTCTGCTGCTGCTGCTGCCCTCCGCCGCCTCCTTCATACATTCCAGTGCCAGTGCCTGTGCCAGTGCGTCCAGTTGGGTCACCGACACCGTGCTGGTCGGTCCGATGAATTGGGTTGCCATACTGGTCGGTCCCACGGAATTCGTCCGTCCGGCGAAGTGGGTCGACGTGCTGTGCGGTGTCGGAAATGACGTTGCCGTATTCATCGGTCTGGCGAATTGGGTTGCCGTACTGGTCGGCGCCAGATTGTGCGCTGTACTGGTTCTGGTAATGTGCCATTGTTTTTCTTTGAGATGATGCGTTTGGGAATGAGGGGATTTGTTCAATCAACAATAAATAGTGACGGAATTTTGCGGATAAGATTTTGACAAGGCATTGGGTTTGCCACGTGGCGATTTTGTGGACACGTGG ATGATTGTCTGCAAGCTTAGTCATTTACAGCCCAGCCAGACACAGGCGACGTCAAATTTCATACCCTTTTCTCAGCTTCAACAGCAGCGGAAGCTCTTAGAATGGCGACTCATAAGTATTCTCCACGACTGCACGGACTTTTCTCAAATCAAGCAAGTTCATGGCCAAATCATTTGCAATGGCTTGAGTCAATGCTCTTACGTCCTCACCAAACTCATTCGCATGCTTTCGAAGGTAGATGTCCCAATGGATTGCTACCCACGTCTGGTTTTTGGACAGGTTAATTACCCCAACCCCTTTCTTTGGACTGCCATGATTCGTGGGTATGCCCTTCAAGGACCCTTCACTGAGTCTATTAACTTGTATACTAACATGAGGAGAAATGGCGTCAGTCCTGTTTCGTTTACGTTTTCTGCGCTTTTTAAGGCTTGTGGGGCTTCTCTTAATTTGGATTTGGGTAGGCAGGATGTCGGTATCGAGACCGATGAAGTTACACTTGTTGGTGTCATCTCAGCCTGTGCACAATTGGGTGCAGCAGGCAGCTCTACAAGCTAACAAGCCGCCATGTCCTTTGCTGCTTCTCTACTAATTAAACACACAGCCTCCTCATTGGTTTCCTCCCGGAAGCTTCTCCTTAATCTTCTCCATCATCCCTTTCTTCTCATGACGCTCCCCCTGCTCCCCCGTCGTGTACCCGACCGATCCCCCCGTCGATACCGGCTTATCATGATGAAACATTCCACCCCTCTGCTGCTGCTGCTGCCCTCCGCCGCCTCCTTCATACATTCCAGTGCCAGTGCCTGTGCCAGTGCGTCCAGTTGGGTCACCGACACCGTGCTGGTCGGTCCGATGAATTGGGTTGCCATACTGGTCGGTCCCACGGAATTCGTCCGTCCGGCGAAGTGGGTCGACGTGCTGTGCGGTGTCGGAAATGACGTTGCCGTATTCATCGGTCTGGCGAATTGGGTTGCCGTACTGGTCGGCGCCAGATTGTGCGCTGTACTGGTTCTGGTAATGTGCCATTGTTTTTCTTTGAGATGATGCGTTTGGGAATGAGGGGATTTGTTCAATCAACAATAAATAGTGACGGAATTTTGCGGATAAGATTTTGACAAGGCATTGGGTTTGCCACGTGGCGATTTTGTGGACACGTGG ATGATTGTCTGCAAGCTTAGTCATTTACAGCCCAGCCAGACACAGGCGACGTCAAATTTCATACCCTTTTCTCAGCTTCAACAGCAGCGGAAGCTCTTAGAATGGCGACTCATAAGTATTCTCCACGACTGCACGGACTTTTCTCAAATCAAGCAAGTTCATGGCCAAATCATTTGCAATGGCTTGAGTCAATGCTCTTACGTCCTCACCAAACTCATTCGCATGCTTTCGAAGGTAGATGTCCCAATGGATTGCTACCCACGTCTGGTTTTTGGACAGGTTAATTACCCCAACCCCTTTCTTTGGACTGCCATGATTCGTGGGTATGCCCTTCAAGGACCCTTCACTGAGTCTATTAACTTGTATACTAACATGAGGAGAAATGGCGTCAGTCCTGTTTCGTTTACGTTTTCTGCGCTTTTTAAGGCTTGTGGGGCTTCTCTTAATTTGGATTTGGGTAGGCAGGATGTCGGTATCGAGACCGATGAAGTTACACTTGTTGGTGTCATCTCAGCCTGTGCACAATTGGGTGCAGCAGGCAGCTCTACAAGCTAA MIVCKLSHLQPSQTQATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQVHGQIICNGLSQCSYVLTKLIRMLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQGPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQDVGIETDEVTLVGVISACAQLGAAGSSTS
BLAST of Cp4.1LG14g01760 vs. Swiss-Prot
Match: PP417_ARATH (Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 6.8e-37 Identity = 75/141 (53.19%), Postives = 101/141 (71.63%), Query Frame = 1
BLAST of Cp4.1LG14g01760 vs. Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 4.3e-15 Identity = 50/151 (33.11%), Postives = 82/151 (54.30%), Query Frame = 1
BLAST of Cp4.1LG14g01760 vs. Swiss-Prot
Match: PP188_ARATH (Pentatricopeptide repeat-containing protein At2g36730 OS=Arabidopsis thaliana GN=PCMP-E44 PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 5.8e-12 Identity = 36/112 (32.14%), Postives = 57/112 (50.89%), Query Frame = 1
BLAST of Cp4.1LG14g01760 vs. Swiss-Prot
Match: PP435_ARATH (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 9.9e-12 Identity = 37/108 (34.26%), Postives = 61/108 (56.48%), Query Frame = 1
BLAST of Cp4.1LG14g01760 vs. Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.8e-11 Identity = 49/167 (29.34%), Postives = 76/167 (45.51%), Query Frame = 1
BLAST of Cp4.1LG14g01760 vs. TrEMBL
Match: A0A0A0KUQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G045030 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 2.0e-64 Identity = 124/153 (81.05%), Postives = 133/153 (86.93%), Query Frame = 1
BLAST of Cp4.1LG14g01760 vs. TrEMBL
Match: M5VV81_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002597mg PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 3.0e-47 Identity = 94/147 (63.95%), Postives = 114/147 (77.55%), Query Frame = 1
BLAST of Cp4.1LG14g01760 vs. TrEMBL
Match: F6GWS8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g02490 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 3.0e-47 Identity = 91/139 (65.47%), Postives = 114/139 (82.01%), Query Frame = 1
BLAST of Cp4.1LG14g01760 vs. TrEMBL
Match: A0A061DFG9_THECC (Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_000299 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 6.2e-45 Identity = 92/148 (62.16%), Postives = 110/148 (74.32%), Query Frame = 1
BLAST of Cp4.1LG14g01760 vs. TrEMBL
Match: A0A0D2NUT2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G012700 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 6.4e-42 Identity = 87/146 (59.59%), Postives = 109/146 (74.66%), Query Frame = 1
BLAST of Cp4.1LG14g01760 vs. TAIR10
Match: AT5G44230.1 (AT5G44230.1 Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 155.2 bits (391), Expect = 3.8e-38 Identity = 75/141 (53.19%), Postives = 101/141 (71.63%), Query Frame = 1
BLAST of Cp4.1LG14g01760 vs. TAIR10
Match: AT3G12770.1 (AT3G12770.1 mitochondrial editing factor 22) HSP 1 Score: 82.8 bits (203), Expect = 2.4e-16 Identity = 50/151 (33.11%), Postives = 82/151 (54.30%), Query Frame = 1
BLAST of Cp4.1LG14g01760 vs. TAIR10
Match: AT2G36730.1 (AT2G36730.1 Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 72.4 bits (176), Expect = 3.3e-13 Identity = 36/112 (32.14%), Postives = 57/112 (50.89%), Query Frame = 1
BLAST of Cp4.1LG14g01760 vs. TAIR10
Match: AT5G59200.1 (AT5G59200.1 Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 71.6 bits (174), Expect = 5.6e-13 Identity = 37/108 (34.26%), Postives = 61/108 (56.48%), Query Frame = 1
BLAST of Cp4.1LG14g01760 vs. TAIR10
Match: AT1G08070.1 (AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 69.7 bits (169), Expect = 2.1e-12 Identity = 49/167 (29.34%), Postives = 76/167 (45.51%), Query Frame = 1
BLAST of Cp4.1LG14g01760 vs. NCBI nr
Match: gi|659102402|ref|XP_008452110.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g44230 [Cucumis melo]) HSP 1 Score: 255.0 bits (650), Expect = 1.0e-64 Identity = 126/153 (82.35%), Postives = 133/153 (86.93%), Query Frame = 1
BLAST of Cp4.1LG14g01760 vs. NCBI nr
Match: gi|449457516|ref|XP_004146494.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g44230 [Cucumis sativus]) HSP 1 Score: 253.4 bits (646), Expect = 2.9e-64 Identity = 124/153 (81.05%), Postives = 133/153 (86.93%), Query Frame = 1
BLAST of Cp4.1LG14g01760 vs. NCBI nr
Match: gi|645273140|ref|XP_008241735.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g44230 [Prunus mume]) HSP 1 Score: 198.7 bits (504), Expect = 8.6e-48 Identity = 95/147 (64.63%), Postives = 115/147 (78.23%), Query Frame = 1
BLAST of Cp4.1LG14g01760 vs. NCBI nr
Match: gi|225431281|ref|XP_002268784.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g44230 [Vitis vinifera]) HSP 1 Score: 196.4 bits (498), Expect = 4.3e-47 Identity = 91/139 (65.47%), Postives = 114/139 (82.01%), Query Frame = 1
BLAST of Cp4.1LG14g01760 vs. NCBI nr
Match: gi|595814629|ref|XP_007203772.1| (hypothetical protein PRUPE_ppa002597mg [Prunus persica]) HSP 1 Score: 196.4 bits (498), Expect = 4.3e-47 Identity = 94/147 (63.95%), Postives = 114/147 (77.55%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |