Cp4.1LG14g00690 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG14g00690
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Location	Cp4.1LG14 : 4248271 .. 4256883 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATTTTGCACGCTTGGTTTTCTCAGTCAAGCGTGGATAGAGAAAGAGAGATGGCAACTGTAAGCAATTTTCCTCGACTGAATTGCAGCTTCACATTTTCTTCTTCTTCTTCCAAGGAATTCCCAAGCAAACAGCGGACAGTTCCGGCTAAAATCCGGCCATCGATTTCTCATTCCAGCCTCGATTCTGCAGGTCAGTCCAAGCTAGTTTTCGTTTGTTGCATTGTGTTTGGCTCCTAAGAAATTTGGTCATGTTTGGATTTTGAAGTGCATGTAAGTTGAGAGGAATTTTTGTTACTTGTAGTGGAAATGATCGAAGGGAATGGACAATGCTTCCGGTTTATTGGCTATTCATTGAATGTTTTCTCTGTTTTCTGAAGCGATTTAGTAGTTTATATATTATTGTGACGATAATTTTGATGGTTTGGATATTTTCATTTCGGAATTCCTCAGGCGTTCAGTTTAATTTTAAGCGGAATGAGAAGTTTTTGAAATCGGTGATCAAATGCAGCGCTGCTGAAGTTGGGGATGTAAGTTAGACGGATTCCTGTTGCTAAATTGTACAGGGGGTGGTTTACTTTTCTTACACTTGTTCTTGTTCGTTCGATGTTCTTAAATTTTCTCTTTTAACAATCTTCAGGGGCCTGAATTTGTGAAAGAGAAAAGTGTTTCTGTTGTTTTGTTGGCTGGAGGCAAGGGAAAAAGGATGGGTGTGAGTTTCTAATTATTTAATCATTTGACTACTTGTATATTCATGTGCATGCAAGAAATGTTTGGATTGTATGTGAAATTTTGCCAGCACCCATTTTCTTCATTATCTTACTTCTACGCATGCTAATTTTGTTATCTTTGTGCAATTAGGCAAGCATGCCAAAGCAGTATCTTCCACTTCTAGGTCAACCAATTGCGTTGTACAGGTAAAATATAAATTAAAATGTCTTTGTTCAGTTTTTTCACAGTTCCATGTGGACAGTTTTAGCTTGCATATTCCTATGGATTTGAAGAAGTTAAAGCTTCCTAATGATTTGTGGTCTGTTTCTGGTCTAGGTGCAACATTTTTCTGTATGTCCGTAGCAAGGAGAGGCTTTACTTGAAATTAATCAATCAAATAACTATTTGGCCTGAGACATTCCTAATTTTTTAGAGAACATTGTGCATCCAAAAATTATCAGATAGATTCCAATCAATATATTCTTTAGACAAGCATGCCAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAGAAAACATATGTATCTGCCTAAGGTAAGATATAAAGAGATGTGCTTGCAGTCTAAGTAGTTGTTTGAGGCTATCAGTTTCAAATCACATGTACGATTGGTCTCAATGCTCATTTTATAGTTAATTTTGATTAGTTCTGCATTTTTTGTGAATTACCAAACGGAATACAATGATTGTGCACACCTATTTGCTGGCATGGTTAGCCTTCCACAGCTGGGCTGAATGGTGTTTGTAATCCCTGTATCAAGCTTTACTTAGCCATACCTTTTTAAAAAAGGCAACAATCCTCTTGATAAATGCAACGCTTGCTATTTTGTCGAAGGTGTGGCTTAAAAGAATAGAAGGTTTGTCCATGATGTGAAGAAATGTTTAGAGGAGCCTAGGTTTTCCTTCATTTTTTAAATTAAGGGTTTTCCCGTCAAGGAAAATACAGAACTCACATAAACATCTCATTTGACAGTTTCTGATTTTGACCTGATTCCTACTTGCATACTTGGTTTTTCTAAGGGCAGTTATCCAGTGACGCTCTCCTAAGGCTTGATAGCTAGCTTCTGCGAACCTTTAGTTTATTATGACACATCTTTTGAAGCTTATAAGCACTTAAATGGTGACTTAATGCAGCTTGTACACTTTCTCACGTATGATCGAGGTTAAAGAAATCGTCGTGGTTTGCGATCCTTCTTATCGGGATATTTTTGAAGGTTTTTTTAGTTTTTTTCTTTCTTTTTATTTCTCACCAAATGCCTCCACTTTGTATTCCAGCTCATGCGTTAATTAATTTATTTTTTCCTGCTCTTAGATGTCAAAGAGAAGATTGATATTCAACTCAAGTTCACACTTCCAGGAAAGGAGAGACAAGATTCCGTGTACAGTGGCCTTCAGGTCAGGTGGACGCTCATAATTTTCTGTTTTGTTTTCCTGGTGGTGATGACAAACATGATTTATTAACAAAAGGAATTAGAAGGCATGGAGACTCTCGCAAAACAGCCAAAGGATGTATAAAAACACTTTCCAGTTGACAGCAAAGGAAGGAATATAATATAGTAGCAATTATATTAAAAACTGCACATTACACTTGGATCATGCAGATTCTTGATGTTTGATGTGATATGTCATTAGATTTTCCGGGATGAATTCACTTTTTTTTTATAATGTTGTGCCTCATGCTGTTTCTTTTTCTCCCATTATCTTATAGCTTTTTGCTACCATTTGTATTCACAGGCAATTGATATGAACGCAGAGCTTGTGTGCATCCATGATTCTGCCAGACCTCTTGTATTAGCAGGAGATATTCAAAAGGTTGCTTTCTCATTCTTATTAATCTCCTGGAACATGTACTTTTTTTGTTGCTTGTCATATATGTCAAAATTATAATTTAATGATAAATGATTTCGAGATTTTGGTATGGCCAGCAAAATATTAACAGAAGAATTTTTCAGGAGGAATGAAGGGTGTGGATAAATTTTTTTGGTTTCTACTCCTTTTGGAACTTCTTTATTGAGTTCTTCCCATAAATAGTTCTTCTTGATAGGTTTAGGGCACCAAAAGGACTTCGTGTGGGGTGGGGATAACCTAAAGGCCATAGGAACGAGACGACCAATGCTGGTTGCTGCATGTGAGGAATCTTACTGCAAAAAGTTCTATAATAACTTTCCTTCCATCATCGCTTCCAATTCTTTATAAAAGACTGTTCATTTTCTCAGTTTCTCAATTTAAAAAACGACTTTTTATGTTGCTGATAGAAAATGGAATGGTCTGAAGTCATTAAAAACATAATTTCTCATGTGAAGTCATTTGATTTAGTTGTATCAAATATTTGAGATGTAAACGTTAACATGAGCATGTCGGAATAAAGAAAATTTGGGATAGGCAGTGCTTGACATACATACATACATAATTAGGAATATTGGACTTCATGTAGAAGATGTACAAATTTGGCAAATTTTACCGTTATGTTCTGTTCTGTCTGTGAGTATATCAGGACTTTTATTGCAACGCTCTCTCTTCAAACTTATGAACTTAACCTAGATTAGGCTCATTTAATGATATATTGATTCTTTGCTTCTAGGTTTTCAAAGATGCTAGGCTGAATGGGGCTGCTGTGCTTGGGGTTCCTGTTAAAGCTACAATAAAAGAGGTATATGTTGGGACTTATTCTATCATTTTCATTCCCCTTTGGATGCCTTTGGTTTCTTTTAGTTTTTAGAAGTTGTCTAAGATAGGTATGTTACATGAAAAACCAAGGGCTATGCTTTACTAATCGGCTTTACTTTCACGAAAGTTGGTTTCACATTCGAAGAAGAAGAAGAATGCATTGAATTCTCATTTCAAAGGCTTGTTTTAAAACGTTACCAAACCAACCACCATCGATTATCCTAGAATTTAATATCTTAGGCCTGAAGTTTCTTGGCAACTAAATGTAGCTGGCTCAGATGGTTACCCCGTGAGATTAATTGAGGTATGTGCAAGTTGGCTTGGATACTCACAAATATTAAAAAAATAAAATCAAACCAGTAATTTCTTAAAGCCAGAGGTTGAAACCATCATCTTCATATTTTGTTTGTTTTCATACTCGTTTGGTCATTTTAAGCCTAATAGGTCCTCCCAACCTACTCAGTTGAACTGATTTATTTGATTTTATAAGTTGCCAACTTCTCTATTTCTTTGGCTGGACTTTTACTGAACTTGGTCGGTAAAAGTATTATCCATCTGCATCCCTTCTGGCTTGCTTTTTGCCTGGTAGATTCTTCTGTTACCTGGTACCTCCTCTTCACCTACCTCCCTATCAATCCACGTCCTGTCAATTATCCTTGCCACTCTGTTTTGTTTTTCTTTAACTCAAGAGATGCCATCACCCTTTTTTCTCTGTTTTGGTCCAGTTCAATCCGGAGGGAAAAGGATAAAAGCCCACCCTCACCTTGTTCTACCATGTCCTCACCCTCAAAACTATTTTGAATAATGCATTCATCCATGTATATTTTCTTATTTGTTCACTCCCATACTTTCTTAAATATTTTCATATTTTCTTTATTCTACCATGCCTTCACCCTCAAATCCTTCAAATTTAACGTTTTCTTTTTGTGGGAACTTAATCATACAAGCTTAAACACTTATGGTACTACATAGATGTCTCTCTGGCTTATCATCTATCCTGGATGGCGTTCCCTCTGCAGAAATGATGCTGAAACACAAAGCCATGTCTTTCATGATTGCTCATACGCTAAAAAATTTAGGGACTTCGCTCCTATCTTTAATTGGATAGTGGTGCTTCCTGTGTACCTCAACCTTCTTCTTTCCCATACATTAATTGGACTCCCCCTTCAAAAGTCACAAAAAGATTCGTTCCACACTATTTCATCACTCCTTTATCCTTTTTGACTTGAAAGAAACAACATAATTTTTTAATGATAAAGACATACTCGATCTTTACTCTATGATGGACAATTTGAGATTTTGTTGAGAATCTTTATTTTTTGTTTCTTGGAGTAAAGATGTTCCCCCATTCAACGATTATAGTTTGAATTCTCAATTAGCCAATGGAAGGGTTTTTTAAACTTGGTTCTGGGGCCTGGTTCTCCTGCCCGGCTCCCCATTTCTTTTATAATTTCATTCTATTAAGGGTCGTTAATCTTTCCTTAATTATTTGTCTTACTGCATGGGCTTATATTAGATTTTATGGGGCATATCTCAGAAGTATAGGTTGCTTCGGGACTATTGAAGATATAAGAACCTCTTAAAAGTGGTACTAAAAAAAAAACTCTTAAAAGTTATCTTTCTACACTTTCTAATTTTCTACATTTTACATTGACGAAGCCTCTTGAATTTCTAATCTTTTGTTTTATTACGCTGTCACTTTGTTAAAGCAATAATGGGCATTTAGATTTTTTAGTATTTTATTTTTAATGAGAGACAATTTCATTGATATTTGAAATTTACAAAAGAGATGTGTTATCTATGATACTTATGAAAAAAACTTCCCAATTTTCAACGAGGGAGGTATGACTATAAGAAGCAAAAATATTAGACAAAAATTTTGACTCCAAAAAAAGAATTTTGTCACGCATATTTTTTATTCCAAAAAAAAAGTAGACTAGTTTCAGATAGGCCTATCCTGTTGCTACTCACACTGTAGTAAATATATAGATACGTCATTTACTCGTATTGCGAGTATTTCAATTGTGTTACAATTTGTAGCCGTTTCTTAACAATTCTCCAATTATTTTTCAGGCGAATGATGATCGTTATGTCCAAAGAACCTTGGACAGGAAAACTCTTTGGGAAATGCAAACTCCGCAGGTTTGCTGACTATTTGCATATATGACGTGCTATCTTTTGTGGAATCTGTTAGGATTTAACACATGCAGATTAATTTAGCATTTCATCGCTTTTTACAGGTTATTGAACCTGAGTTGCTTAGGAAAGGGTTTGAGCTTGTGAACAGGTATTTATTGATTCTTCATTTATTTTCTCGCCTTATCTATAAGGAAACACGATAGCCACACTTTCTAGTACTGGACTAGTTGAGAGACATGGTCGGAAGGAGAGCTAATAAACTATTTTGAGGGCCGCAAGACATGGTCCTCAATCCTAGGAAACTAATAAACTATTTTGAGGGCCGCAAGACATGGTCCTCAATCCTAGGAAAATTCCTAGGTCACTGGAAATAGAATTGTTCCAAGTAAAGTACACTTAACCATGAAGTTCCTATGATTGAGCCATTGAAAAGGAAGGTGCACTTTGTTGGTATAGATAGTAACTTTCCTTTCCTTTTAAGTTTTTCTTAGTCATCCTATCCTTAGGATCGCTTTCATTCAGATGTGGTCTCAATTCATTCATGCACCCCTCTTTTACTCGGGTGTCACATGCCCACCAGCCATGTATGTTATCTTTACCTACTCATTGCTTCTTAAGAGTGTGAAACTAAACCTGCAATCTAAACTACAAAGAATTGTAAAGAAACTTAGCTCTTTACTAAAGGAAAGCAAAAATGCTCTTTTCACTGCATTTCCAAGTCTACTCTACAAAGACAACATGCATGGTTTTATACCGCCTCAAAATGAAACCCTTAACCTTACCTGAGACATGTCAAGAGTTTGTAACGTACTTTTTTACCGTAATTAGCCATTATGTAAATATAAACTAAAAATAAATAAAAAGTCTTAAAACTTAAAATACATTAATGTAACACCATAAATCTAGATTTTAATCATCTATCATAAATTTGTAACTATCTAAGTTTATATAAAGCCACATTTGAAGTTGAAGTATCTTGAAGTCCTTATTATATAAATTAGACTTGATTCTTGTTAATGTGAAATTGATTGTAACTTGAGTTCAATTTTAATAGAACTTGGCTTTAACGGGTGGTAATTTGAACAACATTTTTCATAACTTCCTTCAAGTTCATATTGTATGATTGAGATGTCTTGGTTCATATCAAGAAGGCTGGTTGTAGTAATTTGAACAACATTCTTCACAACTTCCCTCGAGTTCATATCGTATAATTGAGATTTCTTGGTTCATATCAAGAAGGCTGGTTGTAACGGTCCTGGCCGATATTGTCCTCTTTGGGCTTTCCTTTTCGGGCTTCTCCTCAAAGTTTTTTAAAACCCATCTGCTAGGGAGAGGTTTCCACTCTTATAAAGGGTGTTTCGTTCTCCTCCCCAACCGATGTGGGATGGTTGTATCCTCGTATTAGATTATGAAAAAGCTTATGACAAAGTGGACATGTGTTTACCTTGATTGGTGCTTGATAAAAAAAGGCTTCACTAAGTGGTGGAGAAACTGGATTTGGGGGTTGCTTGTCCACTGCAAACTTCTCGGTTATGATAAATGGGAGACGAGAGGTAAAATTGAGACTAAAGGAGAGTTGAGACAAGGGATTCTCTCTCCCTTCTTAGTTAATTCAATACTTCTGCCAGCGTAGAATCCTCGAAGACTTTTTAGTTGAAAGGAATGATATTTAAATTTCCCCCCTACAATATGCTGATGATACAATAATTTTTGTCCAAATCAGGTTATTTTTAAGAAAAACTGTTGGGCCTCAATAACTTTGTTTCTCCATGCTTCTGTCTCTCTTAATCTAGCTAAGACTGCTATTATCAATGTTAATGTTGAGAACGAGGTGCTGAAATGGTATGCTAGAAGTTTTGGTTGCAAGATTGATACTTTGTCTTTCTCTTATTTGGGCTTCCCTGGGGAGCTTTAGAAAGAAGTATTTTACTAGAAGAATTGAGAAATTAGAGCAAGATTTGAAGGAAGATCCCCTAAGATTCGAGAAAGAAAGCAATAAAAATCACCTTTTGACTTTATTACATTTGGTTGTTAAGGGAACTTACCAGAAGTATCACGTTTAGAAAGGTTTATTGTTCCTATTGGCATACCTACTGACCCCAGGCAACCTTCCTCTCAAGACCTAGGCACAACCTTCCACTTAGCTAAATGAGGCGGGAGGTCCGTTTATCAACAATCACGAAGTCGATATCTAAAGAATAGACATATTGTGTCAGTTAGGAACCACGACTCTTCACAATCGTATGATATTGTCCACTTCGAGCATATGCTCTTATAACTTTGCTTTTGGTTTTCCCAAAAAACTTCATACCAACGGAGATGTATTCCCTATAAACTCATGATCAACCCCTTGATTCGGCGAAGTGTCAATAATTCATTGATAAAGCTACATGGGAGTATAATTCAAAGTCTTGGTACATAATACAAAGTGTTCTCTAATTCCTTGTTGCTATCTAATTAATGATATATGTTTTTACGAACAAACACGCTACCGTTTTTCCATCAGGAACGGCTTGGAAGTAACAGACGACGTTTCCATTGTGGAGCACTTGAAACATCCCGTGCTCATAACTGAAGGGTCTTATACCAATATCAAGGTATTCAATAAGAATCTTATATCATACATTTGATTTGAATTTCTTATATAGAGAAAGTAAAGTTTGTTATCCAAAACTGTCTGGTAATAAAAGAGCTGCCTCTTTGCAGGTAACAACACCGGATGATTTATTACTTGCAGAGAGAATATTGAATTTGAGTTCGTGAAAGTCTTCTTGAGAGGTCTAAATAACACTATTATCCTGACCTCTAAATAATCAAAATACCTTATTATTTTCTCCCCATTTCTGAAGTAGAAATGATGTAATTCAAAATTCAATTATGTCATAATGTCAATGAGCATGATGTCGGTGAAATACAGGTTCGAGCATGAATGGTTGTGTTGACGAGATAGAGGCGAAGCTAGATGGAATGAGTATCCAATAAATCTTGTTTCGATTTCTATTGTATTAAATTACATGTTTAATCTCTAAGAACTTTTGGATTTGTATCCATTTAGTTCAAAACTTTATACATTTTATAGATT

mRNA sequence

CCATTTTGCACGCTTGGTTTTCTCAGTCAAGCGTGGATAGAGAAAGAGAGATGGCAACTGTAAGCAATTTTCCTCGACTGAATTGCAGCTTCACATTTTCTTCTTCTTCTTCCAAGGAATTCCCAAGCAAACAGCGGACAGTTCCGGCTAAAATCCGGCCATCGATTTCTCATTCCAGCCTCGATTCTGCAGGCGTTCAGTTTAATTTTAAGCGGAATGAGAAGTTTTTGAAATCGGTGATCAAATGCAGCGCTGCTGAAGTTGGGGATGGGCCTGAATTTGTGAAAGAGAAAAGTGTTTCTGTTGTTTTGTTGGCTGGAGGCAAGGGAAAAAGGATGGGTGCAAGCATGCCAAAGCAGTATCTTCCACTTCTAGGTCAACCAATTGCGTTGTACAGCTTGTACACTTTCTCACGTATGATCGAGGTTAAAGAAATCGTCGTGGTTTGCGATCCTTCTTATCGGGATATTTTTGAAGATGTCAAAGAGAAGATTGATATTCAACTCAAGTTCACACTTCCAGGAAAGGAGAGACAAGATTCCGTGTACAGTGGCCTTCAGGCAATTGATATGAACGCAGAGCTTGTGTGCATCCATGATTCTGCCAGACCTCTTGTATTAGCAGGAGATATTCAAAAGGTTTTCAAAGATGCTAGGCTGAATGGGGCTGCTGTGCTTGGGGTTCCTGTTAAAGCTACAATAAAAGAGGCGAATGATGATCGTTATGTCCAAAGAACCTTGGACAGGAAAACTCTTTGGGAAATGCAAACTCCGCAGGTTATTGAACCTGAGTTGCTTAGGAAAGGGTTTGAGCTTGTGAACAGGAACGGCTTGGAAGTAACAGACGACGTTTCCATTGTGGAGCACTTGAAACATCCCGTGCTCATAACTGAAGGGTCTTATACCAATATCAAGGTAACAACACCGGATGATTTATTACTTGCAGAGAGAATATTGAATTTGAGTTCGTGAAAGTCTTCTTGAGAGGTTCGAGCATGAATGGTTGTGTTGACGAGATAGAGGCGAAGCTAGATGGAATGAGTATCCAATAAATCTTGTTTCGATTTCTATTGTATTAAATTACATGTTTAATCTCTAAGAACTTTTGGATTTGTATCCATTTAGTTCAAAACTTTATACATTTTATAGATT

Coding sequence (CDS)

ATGGCAACTGTAAGCAATTTTCCTCGACTGAATTGCAGCTTCACATTTTCTTCTTCTTCTTCCAAGGAATTCCCAAGCAAACAGCGGACAGTTCCGGCTAAAATCCGGCCATCGATTTCTCATTCCAGCCTCGATTCTGCAGGCGTTCAGTTTAATTTTAAGCGGAATGAGAAGTTTTTGAAATCGGTGATCAAATGCAGCGCTGCTGAAGTTGGGGATGGGCCTGAATTTGTGAAAGAGAAAAGTGTTTCTGTTGTTTTGTTGGCTGGAGGCAAGGGAAAAAGGATGGGTGCAAGCATGCCAAAGCAGTATCTTCCACTTCTAGGTCAACCAATTGCGTTGTACAGCTTGTACACTTTCTCACGTATGATCGAGGTTAAAGAAATCGTCGTGGTTTGCGATCCTTCTTATCGGGATATTTTTGAAGATGTCAAAGAGAAGATTGATATTCAACTCAAGTTCACACTTCCAGGAAAGGAGAGACAAGATTCCGTGTACAGTGGCCTTCAGGCAATTGATATGAACGCAGAGCTTGTGTGCATCCATGATTCTGCCAGACCTCTTGTATTAGCAGGAGATATTCAAAAGGTTTTCAAAGATGCTAGGCTGAATGGGGCTGCTGTGCTTGGGGTTCCTGTTAAAGCTACAATAAAAGAGGCGAATGATGATCGTTATGTCCAAAGAACCTTGGACAGGAAAACTCTTTGGGAAATGCAAACTCCGCAGGTTATTGAACCTGAGTTGCTTAGGAAAGGGTTTGAGCTTGTGAACAGGAACGGCTTGGAAGTAACAGACGACGTTTCCATTGTGGAGCACTTGAAACATCCCGTGCTCATAACTGAAGGGTCTTATACCAATATCAAGGTAACAACACCGGATGATTTATTACTTGCAGAGAGAATATTGAATTTGAGTTCGTGA

Protein sequence

MATVSNFPRLNCSFTFSSSSSKEFPSKQRTVPAKIRPSISHSSLDSAGVQFNFKRNEKFLKSVIKCSAAEVGDGPEFVKEKSVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIEVKEIVVVCDPSYRDIFEDVKEKIDIQLKFTLPGKERQDSVYSGLQAIDMNAELVCIHDSARPLVLAGDIQKVFKDARLNGAAVLGVPVKATIKEANDDRYVQRTLDRKTLWEMQTPQVIEPELLRKGFELVNRNGLEVTDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAERILNLSS

Homology

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BLAST of Cp4.1LG14g00690 vs. Swiss-Prot
Match: ISPD_ARATH (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic OS=Arabidopsis thaliana GN=ISPD PE=1 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.8e-98
Identity = 187/262 (71.37%), Postives = 214/262 (81.68%), Query Frame = 1


Query: 46  SAGVQFNFKRNEKFLKSVIKCSAAEVGDGPEFV-KEKSVSVVLLAGGKGKRMGASMPKQY 105
           S  V  ++KR+   L   IKCS++   D    V KEKSVSV+LLAGG+GKRM  SMPKQY
Sbjct: 43  SKRVNRSYKRDALLLS--IKCSSSTGFDNSNVVVKEKSVSVILLAGGQGKRMKMSMPKQY 102

Query: 106 LPLLGQPIALYSLYTFSRMIEVKEIVVVCDPSYRDIFEDVKEKIDIQLKFTLPGKERQDS 165
           +PLLGQPIALYS +TFSRM EVKEIVVVCDP +RDIFE+ +E ID+ L+F +PGKERQDS
Sbjct: 103 IPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEESIDVDLRFAIPGKERQDS 162

Query: 166 VYSGLQAIDMNAELVCIHDSARPLVLAGDIQKVFKDARLNGAAVLGVPVKATIKEANDDR 225
           VYSGLQ ID+N+ELVCIHDSARPLV   D++KV KD    GAAVLGVP KATIKE N D 
Sbjct: 163 VYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVGAAVLGVPAKATIKEVNSDS 222

Query: 226 YVQRTLDRKTLWEMQTPQVIEPELLRKGFELVNRNGLEVTDDVSIVEHLKHPVLITEGSY 285
            V +TLDRKTLWEMQTPQVI+PELL+KGFELV   GLEVTDDVSIVE+LKHPV +++GSY
Sbjct: 223 LVVKTLDRKTLWEMQTPQVIKPELLKKGFELVKSEGLEVTDDVSIVEYLKHPVYVSQGSY 282

Query: 286 TNIKVTTPDDLLLAERILNLSS 307
           TNIKVTTPDDLLLAERIL+  S
Sbjct: 283 TNIKVTTPDDLLLAERILSEDS 302

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BLAST of Cp4.1LG14g00690 vs. Swiss-Prot
Match: ISPD_ORYSJ (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPD PE=2 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 4.5e-94
Identity = 174/238 (73.11%), Postives = 204/238 (85.71%), Query Frame = 1


Query: 66  CSAAEVGDGPEFVKEKSVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIE 125
           C+A   G   E VKE+SVSVVLL+GG+GKRMGASMPKQYLPLLG PIAL+SL TF ++ E
Sbjct: 58  CAAKADGAQGEAVKERSVSVVLLSGGQGKRMGASMPKQYLPLLGLPIALHSLKTFCQLKE 117

Query: 126 VKEIVVVCDPSYRDIFEDVKEKIDIQLKFTLPGKERQDSVYSGLQAIDMNAELVCIHDSA 185
           VKE+VVVCDP Y+DIFE   E + I +KF LPGKERQDSVY+GLQ ID ++ELVC+HDSA
Sbjct: 118 VKEVVVVCDPDYKDIFEGSIENVQIPIKFALPGKERQDSVYNGLQEIDGDSELVCVHDSA 177

Query: 186 RPLVLAGDIQKVFKDARLNGAAVLGVPVKATIKEANDDRYVQRTLDRKTLWEMQTPQVIE 245
           RPLV + D++KV +DA ++GAAVLGVPVKATIKEA+ + +V +TLDRKTLWEMQTPQV+ 
Sbjct: 178 RPLVSSEDVKKVLEDAIVHGAAVLGVPVKATIKEADSNSFVVKTLDRKTLWEMQTPQVMR 237

Query: 246 PELLRKGFELVNRNGLEVTDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAERILN 304
           P LLR GFELV R+GLEVTDDVSIVE+LKH V ITEGSYTNIKVTTPDDLLLAER++N
Sbjct: 238 PSLLRDGFELVKRDGLEVTDDVSIVEYLKHSVYITEGSYTNIKVTTPDDLLLAERLMN 295

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BLAST of Cp4.1LG14g00690 vs. Swiss-Prot
Match: ISPD_PARUW (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Protochlamydia amoebophila (strain UWE25) GN=ispD PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 6.8e-50
Identity = 106/219 (48.40%), Postives = 148/219 (67.58%), Query Frame = 1


Query: 84  SVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIEVKEIVVVCDPSYRDIFED 143
           +VVLLAGG G RM   +PKQYL +  +PIAL+S    + M E+++++VVC+P Y  +F  
Sbjct: 9   TVVLLAGGMGTRMKNLIPKQYLTIQEKPIALHSFEKLASMPEIEQMIVVCEPQYEQLF-- 68

Query: 144 VKEKIDIQLKFTLPGKERQDSVYSGLQAIDMNAELVCIHDSARPLVLAGDIQKVFKDARL 203
              K++  L F  PG  RQDS+++G++ I  N  LVCIHDSARP +    I++   +A  
Sbjct: 69  TVYKLNKPLIFARPGLRRQDSLWNGIKLIAGNP-LVCIHDSARPFIEIDRIRQTVAEAEK 128

Query: 204 NGAAVLGVPVKATIKEANDDRYVQRTLDRKTLWEMQTPQVIEPELLRKGFELVNRNGLEV 263
            GAAVLGV VKATIK   + +++  T +R  LWEMQTPQ++  +LL  GF +  +N L V
Sbjct: 129 WGAAVLGVRVKATIKICEEKQFIVNTPNRAFLWEMQTPQIVRLKLLYDGFSVAQKNELTV 188

Query: 264 TDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAERIL 303
           +DDVS+VE +  PV + EGSY NIK+TTP+DLL+A+ IL
Sbjct: 189 SDDVSLVELIDKPVKVVEGSYLNIKITTPEDLLIAQSIL 224

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BLAST of Cp4.1LG14g00690 vs. Swiss-Prot
Match: ISPD_CALS4 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=ispD PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 5.3e-42
Identity = 97/224 (43.30%), Postives = 134/224 (59.82%), Query Frame = 1


Query: 82  SVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIEVKEIVVVCDPSYRDIF 141
           +VS V++A G+  RM  S+ K YL + G+P+  YS+  F  +  +KEI+VV  P   +  
Sbjct: 2   NVSAVIVAAGRSTRMNKSLNKVYLSIAGKPVLYYSIKAFDEIEWIKEIIVVTSPEETEYC 61

Query: 142 -EDVKEKI--DIQLKFTLPGKERQDSVYSGLQAIDMNAELVCIHDSARPLVLAGDIQKVF 201
            E+V EK   +   K    G+ERQ SVY+G+  +D + E+V IHD ARPLV    I +  
Sbjct: 62  QENVLEKFYWNKPFKIVKGGEERQYSVYNGISVVDKDCEIVAIHDGARPLVTKEIIMEAI 121

Query: 202 KDARLNGAAVLGVPVKATIKEANDDRYVQRTLDRKTLWEMQTPQVIEPELLRKGFELVNR 261
           K A L  AA +GVPVK TIK A++D ++  T DR+ LW +QTPQV E EL+ K       
Sbjct: 122 KAAYLYKAAAVGVPVKDTIKVADEDNFILDTPDRRYLWAIQTPQVFEKELIVKAHRKALE 181

Query: 262 NGLEVTDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAERIL 303
            G   TDD  +VE +   V + EG Y NIK+TTP+DL++AE  L
Sbjct: 182 EGFLGTDDSVLVERMGFKVKLVEGDYKNIKITTPEDLVVAELFL 225

[Close]

BLAST of Cp4.1LG14g00690 vs. Swiss-Prot
Match: ISPD_GEOKA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Geobacillus kaustophilus (strain HTA426) GN=ispD PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.9e-40
Identity = 98/219 (44.75%), Postives = 133/219 (60.73%), Query Frame = 1


Query: 86  VLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIEVKEIVVVCDPSYRDIFEDVK 145
           ++LA G+GKRM A M KQ+L L G+P+ + +L  F R      IV+V +P+ R  FE + 
Sbjct: 6   IVLAAGRGKRMNAGMNKQFLELGGEPLIVRTLNVFERDERCTRIVLVVNPAERSRFEQLL 65

Query: 146 EKIDIQLKFTLP--GKERQDSVYSGLQAIDMNAELVCIHDSARPLVLAGDIQKVFKDARL 205
            +  IQ    L   G+ERQ SVY+GLQA+    E+V IHD ARP V    + ++   A  
Sbjct: 66  ARFRIQKVAALTDGGEERQHSVYNGLQAL-AGEEIVLIHDGARPFVRVHHLHELVNAAVQ 125

Query: 206 NGAAVLGVPVKATIKEANDDRYVQRTLDRKTLWEMQTPQVIEPELLRKGFELVNRNGLEV 265
            GAA+  V VK TIK+AN   +V++T+DR +LW +QTPQ     L+ +  E   + G   
Sbjct: 126 YGAAIPAVRVKDTIKKANG-LFVEQTIDRSSLWAVQTPQAFRLSLIMEAHEAAKQAGYLG 185

Query: 266 TDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAERIL 303
           TDD S+VE +  PV I EG Y NIK+TTP+DLL AE IL
Sbjct: 186 TDDASLVERIGKPVKIIEGDYRNIKLTTPEDLLFAEAIL 222

[Close]

BLAST of Cp4.1LG14g00690 vs. TrEMBL
Match: A0A0A0L2R5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G113320 PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 1.4e-142
Identity = 261/306 (85.29%), Postives = 282/306 (92.16%), Query Frame = 1


Query: 1   MATVSNFPRLNCSFTFSSSSSKEFPSKQRTVPAKIRPSISHSSLDSAGVQFNFKRNEKFL 60
           M +V++FP LN  F F  SSSKEFP+KQ T+P +I PSISH +L   GVQ+ F+RNEKFL
Sbjct: 1   MVSVTHFPPLN--FCFPPSSSKEFPTKQSTLPPQISPSISHFTLHFPGVQYGFRRNEKFL 60

Query: 61  KSVIKCSAAEVGDGPEFVKEKSVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTF 120
           KSVIKC AA+VGD  E VKE+SVSV+LLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTF
Sbjct: 61  KSVIKCRAAQVGDSSEIVKERSVSVILLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTF 120

Query: 121 SRMIEVKEIVVVCDPSYRDIFEDVKEKIDIQLKFTLPGKERQDSVYSGLQAIDMNAELVC 180
           SRMIEVKEI+VVCDPSY+DIFED KEKIDIQLKFTLPGKERQDSVYSGLQAID+N+ELVC
Sbjct: 121 SRMIEVKEIIVVCDPSYQDIFEDAKEKIDIQLKFTLPGKERQDSVYSGLQAIDLNSELVC 180

Query: 181 IHDSARPLVLAGDIQKVFKDARLNGAAVLGVPVKATIKEANDDRYVQRTLDRKTLWEMQT 240
           IHDSARPLVLAGDIQ+V KD RLNGAAVLGVPVKATIKEANDDR+VQ+TLDRKTLWEMQT
Sbjct: 181 IHDSARPLVLAGDIQQVLKDGRLNGAAVLGVPVKATIKEANDDRFVQKTLDRKTLWEMQT 240

Query: 241 PQVIEPELLRKGFELVNRNGLEVTDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAER 300
           PQVIEPELLRKGFELVNR GLEVTDDVSIVEHL+HPV ITEGSYTNIKVTTPDDLLLAER
Sbjct: 241 PQVIEPELLRKGFELVNREGLEVTDDVSIVEHLRHPVFITEGSYTNIKVTTPDDLLLAER 300

Query: 301 ILNLSS 307
           ILNL+S
Sbjct: 301 ILNLNS 304

[Close]

BLAST of Cp4.1LG14g00690 vs. TrEMBL
Match: K7NBW6_SIRGR (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Siraitia grosvenorii PE=2 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 2.1e-138
Identity = 256/306 (83.66%), Postives = 278/306 (90.85%), Query Frame = 1


Query: 1   MATVSNFPRLNCSFTFSSSSSKEFPSKQRTVPAKIRPSISHSSLDSAGVQFNFKRNEKFL 60
           MA+VS+FPR+NCSF    SS  +FP KQR + AK   SISH SL   G Q  F+RNEK L
Sbjct: 1   MASVSHFPRMNCSFP---SSPSKFPIKQRMIAAKNGQSISHFSLQLTGHQHKFRRNEKIL 60

Query: 61  KSVIKCSAAEVGDGPEFVKEKSVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTF 120
           KSVIKCSAAEVG+  EFVKEKSVSV+LLAGGKGKRMGASMPKQYLPLLGQPIA+YSLYTF
Sbjct: 61  KSVIKCSAAEVGESSEFVKEKSVSVILLAGGKGKRMGASMPKQYLPLLGQPIAMYSLYTF 120

Query: 121 SRMIEVKEIVVVCDPSYRDIFEDVKEKIDIQLKFTLPGKERQDSVYSGLQAIDMNAELVC 180
           SR++EVKEI+VVCDPSY+DIFED KEKIDI+LKFTLPGKERQDSVYSGLQAID+N+ELVC
Sbjct: 121 SRLVEVKEIIVVCDPSYQDIFEDAKEKIDIELKFTLPGKERQDSVYSGLQAIDLNSELVC 180

Query: 181 IHDSARPLVLAGDIQKVFKDARLNGAAVLGVPVKATIKEANDDRYVQRTLDRKTLWEMQT 240
           IHDSARPLVLA DI+KV KDARLNGAAVLGVPVKATIKEAN+DR+VQRTLDRKTLWEMQT
Sbjct: 181 IHDSARPLVLAEDIKKVLKDARLNGAAVLGVPVKATIKEANNDRFVQRTLDRKTLWEMQT 240

Query: 241 PQVIEPELLRKGFELVNRNGLEVTDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAER 300
           PQVI+PELLRKGFELVNR GLEVTDDVSIVE+L+HPV ITEGSYTNIKVTTPDDLLLAER
Sbjct: 241 PQVIKPELLRKGFELVNREGLEVTDDVSIVEYLEHPVFITEGSYTNIKVTTPDDLLLAER 300

Query: 301 ILNLSS 307
           ILNL S
Sbjct: 301 ILNLDS 303

[Close]

BLAST of Cp4.1LG14g00690 vs. TrEMBL
Match: A0A0D2UBM2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G134700 PE=3 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 2.7e-114
Identity = 219/289 (75.78%), Postives = 244/289 (84.43%), Query Frame = 1


Query: 20  SSKEFPSKQRTVPAKIRPSISHS--SLDSAGVQFNFKRNEKFLKSVIKCSAAEVGDGPEF 79
           S++ FP+K   V A   PS SH   S  S+G +   +R  +     IKCSA +V  G   
Sbjct: 15  STQFFPTKSTHVTANSFPSFSHFHVSFPSSGQKVGLRRRARVRTYGIKCSA-KVDYGSAV 74

Query: 80  VKEKSVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIEVKEIVVVCDPSY 139
           V EKSVSV+LLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIEVKEIVVVCDPSY
Sbjct: 75  VNEKSVSVILLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIEVKEIVVVCDPSY 134

Query: 140 RDIFEDVKEKIDIQLKFTLPGKERQDSVYSGLQAIDMNAELVCIHDSARPLVLAGDIQKV 199
           +DIFE+ K+KI++ LKFTLPGKERQDSVYSGLQA+D+N+ELVCIHDSARPLV +GD++KV
Sbjct: 135 KDIFEEAKDKINVDLKFTLPGKERQDSVYSGLQAVDLNSELVCIHDSARPLVRSGDVEKV 194

Query: 200 FKDARLNGAAVLGVPVKATIKEANDDRYVQRTLDRKTLWEMQTPQVIEPELLRKGFELVN 259
            KD  L GAAVLGVPVKATIKEAN D YV +TLDRKTLWEMQTPQVI+PELLRKGFELV+
Sbjct: 195 LKDGWLIGAAVLGVPVKATIKEANSDSYVVKTLDRKTLWEMQTPQVIKPELLRKGFELVH 254

Query: 260 RNGLEVTDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAERILNLSS 307
           R GLEVTDDVSIVEHLKHPV +TEG YTNIKVTTPDDLLLAERILN+SS
Sbjct: 255 RGGLEVTDDVSIVEHLKHPVYVTEGCYTNIKVTTPDDLLLAERILNMSS 302

[Close]

BLAST of Cp4.1LG14g00690 vs. TrEMBL
Match: A0A0D2SS86_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G134700 PE=3 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 8.0e-114
Identity = 218/290 (75.17%), Postives = 243/290 (83.79%), Query Frame = 1


Query: 20  SSKEFPSKQRTVPAKIRPSISHS--SLDSAGVQFNFKRNEKFLKSVIKCSA-AEVGDGPE 79
           S++ FP+K   V A   PS SH   S  S+G +   +R  +     IKCSA  +   G  
Sbjct: 15  STQFFPTKSTHVTANSFPSFSHFHVSFPSSGQKVGLRRRARVRTYGIKCSAKVDYVKGSA 74

Query: 80  FVKEKSVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIEVKEIVVVCDPS 139
            V EKSVSV+LLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIEVKEIVVVCDPS
Sbjct: 75  VVNEKSVSVILLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIEVKEIVVVCDPS 134

Query: 140 YRDIFEDVKEKIDIQLKFTLPGKERQDSVYSGLQAIDMNAELVCIHDSARPLVLAGDIQK 199
           Y+DIFE+ K+KI++ LKFTLPGKERQDSVYSGLQA+D+N+ELVCIHDSARPLV +GD++K
Sbjct: 135 YKDIFEEAKDKINVDLKFTLPGKERQDSVYSGLQAVDLNSELVCIHDSARPLVRSGDVEK 194

Query: 200 VFKDARLNGAAVLGVPVKATIKEANDDRYVQRTLDRKTLWEMQTPQVIEPELLRKGFELV 259
           V KD  L GAAVLGVPVKATIKEAN D YV +TLDRKTLWEMQTPQVI+PELLRKGFELV
Sbjct: 195 VLKDGWLIGAAVLGVPVKATIKEANSDSYVVKTLDRKTLWEMQTPQVIKPELLRKGFELV 254

Query: 260 NRNGLEVTDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAERILNLSS 307
           +R GLEVTDDVSIVEHLKHPV +TEG YTNIKVTTPDDLLLAERILN+SS
Sbjct: 255 HRGGLEVTDDVSIVEHLKHPVYVTEGCYTNIKVTTPDDLLLAERILNMSS 304

[Close]

BLAST of Cp4.1LG14g00690 vs. TrEMBL
Match: A0A0D2R7E6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G134700 PE=3 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 1.0e-113
Identity = 218/289 (75.43%), Postives = 242/289 (83.74%), Query Frame = 1


Query: 20  SSKEFPSKQRTVPAKIRPSISHS--SLDSAGVQFNFKRNEKFLKSVIKCSAAEVGDGPEF 79
           S++ FP+K   V A   PS SH   S  S+G +   +R  +     IKCSA     G   
Sbjct: 15  STQFFPTKSTHVTANSFPSFSHFHVSFPSSGQKVGLRRRARVRTYGIKCSAK----GSAV 74

Query: 80  VKEKSVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIEVKEIVVVCDPSY 139
           V EKSVSV+LLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIEVKEIVVVCDPSY
Sbjct: 75  VNEKSVSVILLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIEVKEIVVVCDPSY 134

Query: 140 RDIFEDVKEKIDIQLKFTLPGKERQDSVYSGLQAIDMNAELVCIHDSARPLVLAGDIQKV 199
           +DIFE+ K+KI++ LKFTLPGKERQDSVYSGLQA+D+N+ELVCIHDSARPLV +GD++KV
Sbjct: 135 KDIFEEAKDKINVDLKFTLPGKERQDSVYSGLQAVDLNSELVCIHDSARPLVRSGDVEKV 194

Query: 200 FKDARLNGAAVLGVPVKATIKEANDDRYVQRTLDRKTLWEMQTPQVIEPELLRKGFELVN 259
            KD  L GAAVLGVPVKATIKEAN D YV +TLDRKTLWEMQTPQVI+PELLRKGFELV+
Sbjct: 195 LKDGWLIGAAVLGVPVKATIKEANSDSYVVKTLDRKTLWEMQTPQVIKPELLRKGFELVH 254

Query: 260 RNGLEVTDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAERILNLSS 307
           R GLEVTDDVSIVEHLKHPV +TEG YTNIKVTTPDDLLLAERILN+SS
Sbjct: 255 RGGLEVTDDVSIVEHLKHPVYVTEGCYTNIKVTTPDDLLLAERILNMSS 299

[Close]

BLAST of Cp4.1LG14g00690 vs. TAIR10
Match: AT2G02500.1 (AT2G02500.1 Nucleotide-diphospho-sugar transferases superfamily protein)

HSP 1 Score: 360.5 bits (924), Expect = 1.0e-99
Identity = 187/262 (71.37%), Postives = 214/262 (81.68%), Query Frame = 1


Query: 46  SAGVQFNFKRNEKFLKSVIKCSAAEVGDGPEFV-KEKSVSVVLLAGGKGKRMGASMPKQY 105
           S  V  ++KR+   L   IKCS++   D    V KEKSVSV+LLAGG+GKRM  SMPKQY
Sbjct: 43  SKRVNRSYKRDALLLS--IKCSSSTGFDNSNVVVKEKSVSVILLAGGQGKRMKMSMPKQY 102

Query: 106 LPLLGQPIALYSLYTFSRMIEVKEIVVVCDPSYRDIFEDVKEKIDIQLKFTLPGKERQDS 165
           +PLLGQPIALYS +TFSRM EVKEIVVVCDP +RDIFE+ +E ID+ L+F +PGKERQDS
Sbjct: 103 IPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEESIDVDLRFAIPGKERQDS 162

Query: 166 VYSGLQAIDMNAELVCIHDSARPLVLAGDIQKVFKDARLNGAAVLGVPVKATIKEANDDR 225
           VYSGLQ ID+N+ELVCIHDSARPLV   D++KV KD    GAAVLGVP KATIKE N D 
Sbjct: 163 VYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVGAAVLGVPAKATIKEVNSDS 222

Query: 226 YVQRTLDRKTLWEMQTPQVIEPELLRKGFELVNRNGLEVTDDVSIVEHLKHPVLITEGSY 285
            V +TLDRKTLWEMQTPQVI+PELL+KGFELV   GLEVTDDVSIVE+LKHPV +++GSY
Sbjct: 223 LVVKTLDRKTLWEMQTPQVIKPELLKKGFELVKSEGLEVTDDVSIVEYLKHPVYVSQGSY 282

Query: 286 TNIKVTTPDDLLLAERILNLSS 307
           TNIKVTTPDDLLLAERIL+  S
Sbjct: 283 TNIKVTTPDDLLLAERILSEDS 302

[Close]

BLAST of Cp4.1LG14g00690 vs. NCBI nr
Match: gi|659102540|ref|XP_008452187.1| (PREDICTED: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 515.4 bits (1326), Expect = 6.9e-143
Identity = 261/306 (85.29%), Postives = 284/306 (92.81%), Query Frame = 1


Query: 1   MATVSNFPRLNCSFTFSSSSSKEFPSKQRTVPAKIRPSISHSSLDSAGVQFNFKRNEKFL 60
           MATV+ FP LNCSF   SSSSK+FP+KQ T+P KI PSISH +L   GVQ++F+ NEKFL
Sbjct: 1   MATVTRFPPLNCSFP--SSSSKQFPTKQPTLPPKIPPSISHFTLHFPGVQYDFRGNEKFL 60

Query: 61  KSVIKCSAAEVGDGPEFVKEKSVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTF 120
           KSVIKC AA+VGDG   VKE+SVSV+LLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTF
Sbjct: 61  KSVIKCGAAQVGDGSGIVKERSVSVILLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTF 120

Query: 121 SRMIEVKEIVVVCDPSYRDIFEDVKEKIDIQLKFTLPGKERQDSVYSGLQAIDMNAELVC 180
           SR+IEVKEI+VVCDPSY+DIFED KEKIDIQLKFTLPGKERQDSVYSGLQAID+N+ELVC
Sbjct: 121 SRLIEVKEIIVVCDPSYQDIFEDTKEKIDIQLKFTLPGKERQDSVYSGLQAIDLNSELVC 180

Query: 181 IHDSARPLVLAGDIQKVFKDARLNGAAVLGVPVKATIKEANDDRYVQRTLDRKTLWEMQT 240
           IHDSARPL+LAGDIQ+V KD RLNGAAVLGVPVKATIKEAN+DR+VQ+TLDRKTLWEMQT
Sbjct: 181 IHDSARPLILAGDIQQVLKDGRLNGAAVLGVPVKATIKEANNDRFVQKTLDRKTLWEMQT 240

Query: 241 PQVIEPELLRKGFELVNRNGLEVTDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAER 300
           PQVIEPELLRKGFELVNR GLEVTDDVSIVEHL+HPV ITEGSYTNIKVTTPDDLLLAER
Sbjct: 241 PQVIEPELLRKGFELVNREGLEVTDDVSIVEHLRHPVFITEGSYTNIKVTTPDDLLLAER 300

Query: 301 ILNLSS 307
           ILNL+S
Sbjct: 301 ILNLNS 304

[Close]

BLAST of Cp4.1LG14g00690 vs. NCBI nr
Match: gi|449431902|ref|XP_004133739.1| (PREDICTED: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 513.8 bits (1322), Expect = 2.0e-142
Identity = 261/306 (85.29%), Postives = 282/306 (92.16%), Query Frame = 1


Query: 1   MATVSNFPRLNCSFTFSSSSSKEFPSKQRTVPAKIRPSISHSSLDSAGVQFNFKRNEKFL 60
           M +V++FP LN  F F  SSSKEFP+KQ T+P +I PSISH +L   GVQ+ F+RNEKFL
Sbjct: 1   MVSVTHFPPLN--FCFPPSSSKEFPTKQSTLPPQISPSISHFTLHFPGVQYGFRRNEKFL 60

Query: 61  KSVIKCSAAEVGDGPEFVKEKSVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTF 120
           KSVIKC AA+VGD  E VKE+SVSV+LLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTF
Sbjct: 61  KSVIKCRAAQVGDSSEIVKERSVSVILLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTF 120

Query: 121 SRMIEVKEIVVVCDPSYRDIFEDVKEKIDIQLKFTLPGKERQDSVYSGLQAIDMNAELVC 180
           SRMIEVKEI+VVCDPSY+DIFED KEKIDIQLKFTLPGKERQDSVYSGLQAID+N+ELVC
Sbjct: 121 SRMIEVKEIIVVCDPSYQDIFEDAKEKIDIQLKFTLPGKERQDSVYSGLQAIDLNSELVC 180

Query: 181 IHDSARPLVLAGDIQKVFKDARLNGAAVLGVPVKATIKEANDDRYVQRTLDRKTLWEMQT 240
           IHDSARPLVLAGDIQ+V KD RLNGAAVLGVPVKATIKEANDDR+VQ+TLDRKTLWEMQT
Sbjct: 181 IHDSARPLVLAGDIQQVLKDGRLNGAAVLGVPVKATIKEANDDRFVQKTLDRKTLWEMQT 240

Query: 241 PQVIEPELLRKGFELVNRNGLEVTDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAER 300
           PQVIEPELLRKGFELVNR GLEVTDDVSIVEHL+HPV ITEGSYTNIKVTTPDDLLLAER
Sbjct: 241 PQVIEPELLRKGFELVNREGLEVTDDVSIVEHLRHPVFITEGSYTNIKVTTPDDLLLAER 300

Query: 301 ILNLSS 307
           ILNL+S
Sbjct: 301 ILNLNS 304

[Close]

BLAST of Cp4.1LG14g00690 vs. NCBI nr
Match: gi|343466163|gb|AEM42975.1| (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Siraitia grosvenorii])

HSP 1 Score: 500.0 bits (1286), Expect = 3.0e-138
Identity = 256/306 (83.66%), Postives = 278/306 (90.85%), Query Frame = 1


Query: 1   MATVSNFPRLNCSFTFSSSSSKEFPSKQRTVPAKIRPSISHSSLDSAGVQFNFKRNEKFL 60
           MA+VS+FPR+NCSF    SS  +FP KQR + AK   SISH SL   G Q  F+RNEK L
Sbjct: 1   MASVSHFPRMNCSFP---SSPSKFPIKQRMIAAKNGQSISHFSLQLTGHQHKFRRNEKIL 60

Query: 61  KSVIKCSAAEVGDGPEFVKEKSVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTF 120
           KSVIKCSAAEVG+  EFVKEKSVSV+LLAGGKGKRMGASMPKQYLPLLGQPIA+YSLYTF
Sbjct: 61  KSVIKCSAAEVGESSEFVKEKSVSVILLAGGKGKRMGASMPKQYLPLLGQPIAMYSLYTF 120

Query: 121 SRMIEVKEIVVVCDPSYRDIFEDVKEKIDIQLKFTLPGKERQDSVYSGLQAIDMNAELVC 180
           SR++EVKEI+VVCDPSY+DIFED KEKIDI+LKFTLPGKERQDSVYSGLQAID+N+ELVC
Sbjct: 121 SRLVEVKEIIVVCDPSYQDIFEDAKEKIDIELKFTLPGKERQDSVYSGLQAIDLNSELVC 180

Query: 181 IHDSARPLVLAGDIQKVFKDARLNGAAVLGVPVKATIKEANDDRYVQRTLDRKTLWEMQT 240
           IHDSARPLVLA DI+KV KDARLNGAAVLGVPVKATIKEAN+DR+VQRTLDRKTLWEMQT
Sbjct: 181 IHDSARPLVLAEDIKKVLKDARLNGAAVLGVPVKATIKEANNDRFVQRTLDRKTLWEMQT 240

Query: 241 PQVIEPELLRKGFELVNRNGLEVTDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAER 300
           PQVI+PELLRKGFELVNR GLEVTDDVSIVE+L+HPV ITEGSYTNIKVTTPDDLLLAER
Sbjct: 241 PQVIKPELLRKGFELVNREGLEVTDDVSIVEYLEHPVFITEGSYTNIKVTTPDDLLLAER 300

Query: 301 ILNLSS 307
           ILNL S
Sbjct: 301 ILNLDS 303

[Close]

BLAST of Cp4.1LG14g00690 vs. NCBI nr
Match: gi|778676449|ref|XP_011650586.1| (PREDICTED: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 428.3 bits (1100), Expect = 1.1e-116
Identity = 214/231 (92.64%), Postives = 225/231 (97.40%), Query Frame = 1


Query: 76  EFVKEKSVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIEVKEIVVVCDP 135
           E VKE+SVSV+LLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIEVKEI+VVCDP
Sbjct: 24  EIVKERSVSVILLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIEVKEIIVVCDP 83

Query: 136 SYRDIFEDVKEKIDIQLKFTLPGKERQDSVYSGLQAIDMNAELVCIHDSARPLVLAGDIQ 195
           SY+DIFED KEKIDIQLKFTLPGKERQDSVYSGLQAID+N+ELVCIHDSARPLVLAGDIQ
Sbjct: 84  SYQDIFEDAKEKIDIQLKFTLPGKERQDSVYSGLQAIDLNSELVCIHDSARPLVLAGDIQ 143

Query: 196 KVFKDARLNGAAVLGVPVKATIKEANDDRYVQRTLDRKTLWEMQTPQVIEPELLRKGFEL 255
           +V KD RLNGAAVLGVPVKATIKEANDDR+VQ+TLDRKTLWEMQTPQVIEPELLRKGFEL
Sbjct: 144 QVLKDGRLNGAAVLGVPVKATIKEANDDRFVQKTLDRKTLWEMQTPQVIEPELLRKGFEL 203

Query: 256 VNRNGLEVTDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAERILNLSS 307
           VNR GLEVTDDVSIVEHL+HPV ITEGSYTNIKVTTPDDLLLAERILNL+S
Sbjct: 204 VNREGLEVTDDVSIVEHLRHPVFITEGSYTNIKVTTPDDLLLAERILNLNS 254

[Close]

BLAST of Cp4.1LG14g00690 vs. NCBI nr
Match: gi|659102542|ref|XP_008452188.1| (PREDICTED: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 424.5 bits (1090), Expect = 1.6e-115
Identity = 212/238 (89.08%), Postives = 228/238 (95.80%), Query Frame = 1


Query: 69  AEVGDGPEFVKEKSVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRMIEVKE 128
           A++  G   VKE+SVSV+LLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSR+IEVKE
Sbjct: 17  AKLYRGSGIVKERSVSVILLAGGKGKRMGASMPKQYLPLLGQPIALYSLYTFSRLIEVKE 76

Query: 129 IVVVCDPSYRDIFEDVKEKIDIQLKFTLPGKERQDSVYSGLQAIDMNAELVCIHDSARPL 188
           I+VVCDPSY+DIFED KEKIDIQLKFTLPGKERQDSVYSGLQAID+N+ELVCIHDSARPL
Sbjct: 77  IIVVCDPSYQDIFEDTKEKIDIQLKFTLPGKERQDSVYSGLQAIDLNSELVCIHDSARPL 136

Query: 189 VLAGDIQKVFKDARLNGAAVLGVPVKATIKEANDDRYVQRTLDRKTLWEMQTPQVIEPEL 248
           +LAGDIQ+V KD RLNGAAVLGVPVKATIKEAN+DR+VQ+TLDRKTLWEMQTPQVIEPEL
Sbjct: 137 ILAGDIQQVLKDGRLNGAAVLGVPVKATIKEANNDRFVQKTLDRKTLWEMQTPQVIEPEL 196

Query: 249 LRKGFELVNRNGLEVTDDVSIVEHLKHPVLITEGSYTNIKVTTPDDLLLAERILNLSS 307
           LRKGFELVNR GLEVTDDVSIVEHL+HPV ITEGSYTNIKVTTPDDLLLAERILNL+S
Sbjct: 197 LRKGFELVNREGLEVTDDVSIVEHLRHPVFITEGSYTNIKVTTPDDLLLAERILNLNS 254

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g00690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ISPD_ARATH	1.8e-98	71.37	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic OS=Arabi...	[more]
ISPD_ORYSJ	4.5e-94	73.11	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic OS=Oryza...	[more]
ISPD_PARUW	6.8e-50	48.40	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Protochlamydia amoeb...	[more]
ISPD_CALS4	5.3e-42	43.30	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Caldanaerobacter sub...	[more]
ISPD_GEOKA	4.9e-40	44.75	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Geobacillus kaustoph...	[more]

BLAST of Cp4.1LG14g00690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2R5_CUCSA	1.4e-142	85.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G113320 PE=3 SV=1	[more]
K7NBW6_SIRGR	2.1e-138	83.66	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Siraitia grosvenorii...	[more]
A0A0D2UBM2_GOSRA	2.7e-114	75.78	Uncharacterized protein OS=Gossypium raimondii GN=B456_010G134700 PE=3 SV=1	[more]
A0A0D2SS86_GOSRA	8.0e-114	75.17	Uncharacterized protein OS=Gossypium raimondii GN=B456_010G134700 PE=3 SV=1	[more]
A0A0D2R7E6_GOSRA	1.0e-113	75.43	Uncharacterized protein OS=Gossypium raimondii GN=B456_010G134700 PE=3 SV=1	[more]

BLAST of Cp4.1LG14g00690 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G02500.1	1.0e-99	71.37	Nucleotide-diphospho-sugar transferases superfamily protein	[more]

BLAST of Cp4.1LG14g00690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102540\|ref\|XP_008452187.1\|	6.9e-143	85.29	PREDICTED: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplast...	[more]
gi\|449431902\|ref\|XP_004133739.1\|	2.0e-142	85.29	PREDICTED: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplast...	[more]
gi\|343466163\|gb\|AEM42975.1\|	3.0e-138	83.66	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Siraitia grosvenorii]	[more]
gi\|778676449\|ref\|XP_011650586.1\|	1.1e-116	92.64	PREDICTED: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplast...	[more]
gi\|659102542\|ref\|XP_008452188.1\|	1.6e-115	89.08	PREDICTED: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplast...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0050518	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008299	isoprenoid biosynthetic process

Vocabulary: **INTERPRO**
Term	Definition
IPR018294	ISPD_synthase_CS
IPR001228	IspD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006520	cellular amino acid metabolic process
biological_process	GO:0034641	cellular nitrogen compound metabolic process
biological_process	GO:0006766	vitamin metabolic process
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0044272	sulfur compound biosynthetic process
biological_process	GO:0000096	sulfur amino acid metabolic process
biological_process	GO:0019748	secondary metabolic process
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0019216	regulation of lipid metabolic process
biological_process	GO:0031408	oxylipin biosynthetic process
biological_process	GO:0006733	oxidoreduction coenzyme metabolic process
biological_process	GO:0009117	nucleotide metabolic process
biological_process	GO:0009106	lipoate metabolic process
biological_process	GO:0009695	jasmonic acid biosynthetic process
biological_process	GO:0006546	glycine catabolic process
biological_process	GO:0009108	coenzyme biosynthetic process
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0008652	cellular amino acid biosynthetic process
biological_process	GO:0015994	chlorophyll metabolic process
biological_process	GO:0006732	coenzyme metabolic process
biological_process	GO:0051188	cofactor biosynthetic process
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0008299	isoprenoid biosynthetic process
biological_process	GO:1901566	organonitrogen compound biosynthetic process
biological_process	GO:0046148	pigment biosynthetic process
biological_process	GO:0006694	steroid biosynthetic process
biological_process	GO:0006790	sulfur compound metabolic process
biological_process	GO:0009072	aromatic amino acid family metabolic process
biological_process	GO:0016117	carotenoid biosynthetic process
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0050518	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0070567	cytidylyltransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g00690.1	Cp4.1LG14g00690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001228	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	HAMAP	MF_00108	IspD	coord: 82..305 score: 28
IPR001228	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	PFAM	PF01128	IspD	coord: 83..303 score: 7.0
IPR001228	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	TIGRFAMs	TIGR00453	TIGR00453	coord: 84..302 score: 2.6
IPR018294	4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site	PROSITE	PS01295	ISPD	coord: 179..186 scor
None	No IPR available	PANTHER	PTHR32125	FAMILY NOT NAMED	coord: 32..306 score: 6.9E
None	No IPR available	PANTHER	PTHR32125:SF4	2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE, CHLOROPLASTIC	coord: 32..306 score: 6.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG14g00690	Cucsa.260460	Cucumber (Gy14) v1	cgycpeB0674
Cp4.1LG14g00690	CmaCh16G007540	Cucurbita maxima (Rimu)	cmacpeB344
Cp4.1LG14g00690	CmoCh16G008160	Cucurbita moschata (Rifu)	cmocpeB307
Cp4.1LG14g00690	Cla004566	Watermelon (97103) v1	cpewmB213
Cp4.1LG14g00690	Csa3G113320	Cucumber (Chinese Long) v2	cpecuB215
Cp4.1LG14g00690	MELO3C016431	Melon (DHL92) v3.5.1	cpemeB186
Cp4.1LG14g00690	ClCG10G007530	Watermelon (Charleston Gray)	cpewcgB195
Cp4.1LG14g00690	CSPI03G06600	Wild cucumber (PI 183967)	cpecpiB218
Cp4.1LG14g00690	Lsi05G007660	Bottle gourd (USVL1VR-Ls)	cpelsiB176
Cp4.1LG14g00690	CsaV3_3G006740	Cucumber (Chinese Long) v3	cpecucB0258
Cp4.1LG14g00690	Bhi11G000809	Wax gourd	cpewgoB0267
Cp4.1LG14g00690	CsGy3G006710	Cucumber (Gy14) v2	cgybcpeB328
Cp4.1LG14g00690	Carg05871	Silver-seed gourd	carcpeB1414

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG14g00690	Cucurbita pepo (Zucchini)	cpecpeB233
Cp4.1LG14g00690	Cucurbita maxima (Rimu)	cmacpeB714
Cp4.1LG14g00690	Cucurbita moschata (Rifu)	cmocpeB667
Cp4.1LG14g00690	Melon (DHL92) v3.6.1	cpemedB235
Cp4.1LG14g00690	Silver-seed gourd	carcpeB0012
Cp4.1LG14g00690	Wax gourd	cpewgoB0283