Cp4.1LG13g11760 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG13g11760
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Late embryogenesis abundant protein (LEA) family protein
Location	Cp4.1LG13 : 9351777 .. 9353810 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTCTTTGGCCCATTTTCCATTCTGAGGAGAGAATCGATAAGCCACAGAGCTTGAAAGGAGGGAGAAGATGGCTTTCTTTCCCCTTCCATTTTATGGAAAGGTAAGAGAAATAAAATTAGTGGGACACGTGACAGGCAGCAGAAACCAAAGCAACCAAGTTTTGTTCTTACTTCAATTGCACACGTTGAGATACATTGTCGAAACATCTGTCCTTCTATATGTACTACGTGTCACTTCTGGCTGTGCACTATCTTCCTGGTTGCTTAATAAATAAATGTCTGCTACTTCTTTTCGACACCTTCAACTAAATCATCATGCCCAACCTATTCGCTTTGTGTCTCGTCATTACTTCTTTAACTGCGGCGGGACTCTGGTCTCCTTCCCCGGCGTCCCGGCAAGATCACGAGCAGGATGTTATTGTTAAAGAAGGTCACCGAGTGGTTGTGGTCGAGTATGGCGACCAAGGTCAACACAATACTAAGGTTTCCATCTCTTCCGAACCCACCAAAGATGCCTCCCCTAGCAACCCACTACATGATAGTTTAAATATTGGGATCCCCAACGAAGACTCCGAAAGGCACCGCACCAGAGATCTTATTTGCGATGCCTTGGGCAAATGTAAGCATAAGATAGCCAGTGCTGTGGGGAAGGCTAAAGTAATGGTTTCGGAGACGGCGCAGGAGGCCCACGACGTTGGAGAGGCTGTTGCTGGTGCTTTCGATGAAGCCAAAGAGACAGTTTCAGACAAATCTCACCACGTGGGAACGTCGTTCTCAGAGAAAGGGCATCGATTGAGGGAGTCGGTTGAGAAAGCCAGAGAGGATGCCGACGAGTTCCTGGAGAAAACGAAAGAGACGGTTTTGGAGAAAGCACGTGACTTGAAAGAGGGTGCAAAGGATGTATTGAAGGAAGGCAAAGCACGTGACTTGAAAGAGGGTGCAAAGGATGTATTGAAGGAAGGCAAAGCACGTGACTTGAAAGAGGGTGCAATGGAGAAAGGGAGAGAAGCAAGACAAACTGCGGAGAAGATTAAAACTGGTGGAAACAAGGTCAAGGAGAATCTGATGGGTATTCCTGATGGAGGATTAAAGCTAGTAAATGATTCCTTTAGGTACTTGAGGTCGTTAGAGTCGTGGAAAGCGGCGATGGATGTGTTGAGTCTGTTGGGATTTGGTATGGCTTTGGGAATGGGCGTGTGGACTACCTTCATCTCTAGCTATGTGCTGGCGAGTGCGTTGCCAAGGCAGCAGTTGGCAGTGGTACAGAGCAAGATATATCCCCTGTATTTTAGGGCCATGGCTTCCAGCATTGGGATGGCCCTATTCGGGCATCTATTCAGCCGCACAAAATGGATGTTCCCAATTCCGAAAAATGCTGAAGTGGTCCAAGGATATGTACTTGTGGCTGCACTTTTGATGATTTTTGCCAATTCTCTCTACATGGAGCCCCAAGCCACCAAGGTATCTTCTGACCGCTGCTCCACCTTGAGTTTTTTTAGTTTTGTACTAGTTCCCTGTTATTGTGTATTTATTCCTGTGCAGGTAATGTTTGAGAGATTAAAAGTGGAGAAGGAAGAAGGAAAAGGAATTGAAGACATAGCCGCTGAACCTCGGGACGCCAATGATAATCCCCCAGCAGTCACAACCAGCACAGCCACACAAGTCGTAGAACGAGAGGCCGTGAAGTCCAGAATCGTGGGGTTGAATAAGAGGCTGAAGAAGCTGAATTCGTATTCATCCTTGTTAAACCTGCTCACTCTGATGGCTCTCACCTGGCATCTTGTGTACCTGAGCCAGCGTCTGTGCATCCCCTGCTAATATAACAATATTTTTCTTTTCCTGGTTTTGTTTTTGATGTGTGCATATTTTACCTGAAGTAGACCGTGTTTAGGCGGTTGGTACCAAAGTTGGTTAGTTTCAACTTATTGTCGGTGCTAAGTGGTTATATAATGTATTTTAGATTGTTTATTTCCTGTCTAATGAACTATTTTAGATTGTTTATTTCCTATTTAATGATTAGGTGCTAAGTTCCC

mRNA sequence

AGTTCTTTGGCCCATTTTCCATTCTGAGGAGAGAATCGATAAGCCACAGAGCTTGAAAGGAGGGAGAAGATGGCTTTCTTTCCCCTTCCATTTTATGGAAAGGTAAGAGAAATAAAATTAGTGGGACACGTGACAGGCAGCAGAAACCAAAGCAACCAAGTTTTGTTCTTACTTCAATTGCACACGTTGAGATACATTGTCGAAACATCTGTCCTTCTATATGTACTACGTGTCACTTCTGGCTGTGCACTATCTTCCTGGTTGCTTAATAAATAAATGTCTGCTACTTCTTTTCGACACCTTCAACTAAATCATCATGCCCAACCTATTCGCTTTGTGTCTCGTCATTACTTCTTTAACTGCGGCGGGACTCTGGTCTCCTTCCCCGGCGTCCCGGCAAGATCACGAGCAGGATGTTATTGTTAAAGAAGGTCACCGAGTGGTTGTGGTCGAGTATGGCGACCAAGGTCAACACAATACTAAGGTTTCCATCTCTTCCGAACCCACCAAAGATGCCTCCCCTAGCAACCCACTACATGATAGTTTAAATATTGGGATCCCCAACGAAGACTCCGAAAGGCACCGCACCAGAGATCTTATTTGCGATGCCTTGGGCAAATGTAAGCATAAGATAGCCAGTGCTGTGGGGAAGGCTAAAGTAATGGTTTCGGAGACGGCGCAGGAGGCCCACGACGTTGGAGAGGCTGTTGCTGGTGCTTTCGATGAAGCCAAAGAGACAGTTTCAGACAAATCTCACCACGTGGGAACGTCGTTCTCAGAGAAAGGGCATCGATTGAGGGAGTCGGTTGAGAAAGCCAGAGAGGATGCCGACGAGTTCCTGGAGAAAACGAAAGAGACGGTTTTGGAGAAAGCACGTGACTTGAAAGAGGGTGCAAAGGATGTATTGAAGGAAGGCAAAGCACGTGACTTGAAAGAGGGTGCAAAGGATGTATTGAAGGAAGGCAAAGCACGTGACTTGAAAGAGGGTGCAATGGAGAAAGGGAGAGAAGCAAGACAAACTGCGGAGAAGATTAAAACTGGTGGAAACAAGGTCAAGGAGAATCTGATGGGTATTCCTGATGGAGGATTAAAGCTAGTAAATGATTCCTTTAGGTACTTGAGGTCGTTAGAGTCGTGGAAAGCGGCGATGGATGTGTTGAGTCTGTTGGGATTTGGTATGGCTTTGGGAATGGGCGTGTGGACTACCTTCATCTCTAGCTATGTGCTGGCGAGTGCGTTGCCAAGGCAGCAGTTGGCAGTGGTACAGAGCAAGATATATCCCCTGTATTTTAGGGCCATGGCTTCCAGCATTGGGATGGCCCTATTCGGGCATCTATTCAGCCGCACAAAATGGATGTTCCCAATTCCGAAAAATGCTGAAGTGGTCCAAGGATATGTACTTGTGGCTGCACTTTTGATGATTTTTGCCAATTCTCTCTACATGGAGCCCCAAGCCACCAAGGTAATGTTTGAGAGATTAAAAGTGGAGAAGGAAGAAGGAAAAGGAATTGAAGACATAGCCGCTGAACCTCGGGACGCCAATGATAATCCCCCAGCAGTCACAACCAGCACAGCCACACAAGTCGTAGAACGAGAGGCCGTGAAGTCCAGAATCGTGGGGTTGAATAAGAGGCTGAAGAAGCTGAATTCGTATTCATCCTTGTTAAACCTGCTCACTCTGATGGCTCTCACCTGGCATCTTGTGTACCTGAGCCAGCGTCTGTGCATCCCCTGCTAATATAACAATATTTTTCTTTTCCTGGTTTTGTTTTTGATGTGTGCATATTTTACCTGAAGTAGACCGTGTTTAGGCGGTTGGTACCAAAGTTGGTTAGTTTCAACTTATTGTCGGTGCTAAGTGGTTATATAATGTATTTTAGATTGTTTATTTCCTGTCTAATGAACTATTTTAGATTGTTTATTTCCTATTTAATGATTAGGTGCTAAGTTCCC

Coding sequence (CDS)

ATGCCCAACCTATTCGCTTTGTGTCTCGTCATTACTTCTTTAACTGCGGCGGGACTCTGGTCTCCTTCCCCGGCGTCCCGGCAAGATCACGAGCAGGATGTTATTGTTAAAGAAGGTCACCGAGTGGTTGTGGTCGAGTATGGCGACCAAGGTCAACACAATACTAAGGTTTCCATCTCTTCCGAACCCACCAAAGATGCCTCCCCTAGCAACCCACTACATGATAGTTTAAATATTGGGATCCCCAACGAAGACTCCGAAAGGCACCGCACCAGAGATCTTATTTGCGATGCCTTGGGCAAATGTAAGCATAAGATAGCCAGTGCTGTGGGGAAGGCTAAAGTAATGGTTTCGGAGACGGCGCAGGAGGCCCACGACGTTGGAGAGGCTGTTGCTGGTGCTTTCGATGAAGCCAAAGAGACAGTTTCAGACAAATCTCACCACGTGGGAACGTCGTTCTCAGAGAAAGGGCATCGATTGAGGGAGTCGGTTGAGAAAGCCAGAGAGGATGCCGACGAGTTCCTGGAGAAAACGAAAGAGACGGTTTTGGAGAAAGCACGTGACTTGAAAGAGGGTGCAAAGGATGTATTGAAGGAAGGCAAAGCACGTGACTTGAAAGAGGGTGCAAAGGATGTATTGAAGGAAGGCAAAGCACGTGACTTGAAAGAGGGTGCAATGGAGAAAGGGAGAGAAGCAAGACAAACTGCGGAGAAGATTAAAACTGGTGGAAACAAGGTCAAGGAGAATCTGATGGGTATTCCTGATGGAGGATTAAAGCTAGTAAATGATTCCTTTAGGTACTTGAGGTCGTTAGAGTCGTGGAAAGCGGCGATGGATGTGTTGAGTCTGTTGGGATTTGGTATGGCTTTGGGAATGGGCGTGTGGACTACCTTCATCTCTAGCTATGTGCTGGCGAGTGCGTTGCCAAGGCAGCAGTTGGCAGTGGTACAGAGCAAGATATATCCCCTGTATTTTAGGGCCATGGCTTCCAGCATTGGGATGGCCCTATTCGGGCATCTATTCAGCCGCACAAAATGGATGTTCCCAATTCCGAAAAATGCTGAAGTGGTCCAAGGATATGTACTTGTGGCTGCACTTTTGATGATTTTTGCCAATTCTCTCTACATGGAGCCCCAAGCCACCAAGGTAATGTTTGAGAGATTAAAAGTGGAGAAGGAAGAAGGAAAAGGAATTGAAGACATAGCCGCTGAACCTCGGGACGCCAATGATAATCCCCCAGCAGTCACAACCAGCACAGCCACACAAGTCGTAGAACGAGAGGCCGTGAAGTCCAGAATCGTGGGGTTGAATAAGAGGCTGAAGAAGCTGAATTCGTATTCATCCTTGTTAAACCTGCTCACTCTGATGGCTCTCACCTGGCATCTTGTGTACCTGAGCCAGCGTCTGTGCATCCCCTGCTAA

Protein sequence

MPNLFALCLVITSLTAAGLWSPSPASRQDHEQDVIVKEGHRVVVVEYGDQGQHNTKVSISSEPTKDASPSNPLHDSLNIGIPNEDSERHRTRDLICDALGKCKHKIASAVGKAKVMVSETAQEAHDVGEAVAGAFDEAKETVSDKSHHVGTSFSEKGHRLRESVEKAREDADEFLEKTKETVLEKARDLKEGAKDVLKEGKARDLKEGAKDVLKEGKARDLKEGAMEKGREARQTAEKIKTGGNKVKENLMGIPDGGLKLVNDSFRYLRSLESWKAAMDVLSLLGFGMALGMGVWTTFISSYVLASALPRQQLAVVQSKIYPLYFRAMASSIGMALFGHLFSRTKWMFPIPKNAEVVQGYVLVAALLMIFANSLYMEPQATKVMFERLKVEKEEGKGIEDIAAEPRDANDNPPAVTTSTATQVVEREAVKSRIVGLNKRLKKLNSYSSLLNLLTLMALTWHLVYLSQRLCIPC

Homology

[Close]

BLAST of Cp4.1LG13g11760 vs. TrEMBL
Match: A0A0A0KSX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650480 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.1e-96
Identity = 223/368 (60.60%), Postives = 267/368 (72.55%), Query Frame = 1


Query: 111 GKAKVMVSETAQEAHDVGEAVAGAFDE-AKETVSDKSHH-VGTSFSEKGHRLRESVEKAR 170
           G   V+V    Q  H+   +++   D+ AK +   ++   +   + +  H++  +VEKA+
Sbjct: 28  GHRMVVVEYDDQGQHNTKVSISSEPDQDAKNSERHRTKDLICDVYGKCKHKVASAVEKAK 87

Query: 171 EDADEFLEKTKETVLEKARDLKEGAKDVLKEGKARDLKEGAKDVLKEGKARDLKEGAMEK 230
               E  ++  + V E   D  +GAKD         LKEGAK+ L+  K+R+ K   + K
Sbjct: 88  VMVTETAQEAHD-VGESVTDAFDGAKD--------KLKEGAKETLEMAKSREEK---VVK 147

Query: 231 GRE--ARQTAEKIKTGGNKVKENLMGIPDGGLKLVNDSFRYLRSLESWKAAMDVLSLLGF 290
           G E  A++T EKIKTG NK+KENLMG+ D G K+++  FR+L         MD L LLGF
Sbjct: 148 GAERVAKETGEKIKTGENKLKENLMGLVDRGFKVIDYLFRHLGF------GMDALGLLGF 207

Query: 291 GMALGMGVWTTFISSYVLASALPRQQLAVVQSKIYPLYFRAMASSIGMALFGHLFSRTKW 350
            MALGMGVW TFISSYVLAS LPRQQL VVQSKIYP+YF+AMAS IGMAL GHLFSRT+W
Sbjct: 208 TMALGMGVWVTFISSYVLASVLPRQQLGVVQSKIYPVYFKAMASCIGMALLGHLFSRTEW 267

Query: 351 MFPIPKNAEVVQGYVLVAALLMIFANSLYMEPQATKVMFERLKVEKEEGKGIEDIAAEPR 410
            FPIPKN+EVVQGYVLVAALLMIFANSLYMEP+ATKVMFERLK+EKEEG+GIEDIA E  
Sbjct: 268 TFPIPKNSEVVQGYVLVAALLMIFANSLYMEPRATKVMFERLKIEKEEGRGIEDIAREET 327

Query: 411 -DANDNPPAVTTSTATQVVEREAVKSRIVGLNKRLKKLNSYSSLLNLLTLMALTWHLVYL 470
            +  DN PA+T+ST TQVV+RE VKSRIVGLNKRLKKLNSYSSLLNLLTLMALTWHLVYL
Sbjct: 328 GNVIDNSPAITSSTPTQVVDREVVKSRIVGLNKRLKKLNSYSSLLNLLTLMALTWHLVYL 377

Query: 471 SQRLCIPC 474
           SQRLC PC
Sbjct: 388 SQRLCNPC 377

[Close]

BLAST of Cp4.1LG13g11760 vs. TrEMBL
Match: A0A0D2SDT7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G138700 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.2e-79
Identity = 210/492 (42.68%), Postives = 273/492 (55.49%), Query Frame = 1


Query: 32  QDVIVKEGHRVVVVEYGDQGQHNTKVSISS---------------EPTKDASPSNPLHDS 91
            DVI+KEGHRV+VVEY   G+HNTKVSISS               E  KDA+ + P +  
Sbjct: 24  DDVILKEGHRVIVVEYDQDGKHNTKVSISSPSLHQQTDQGEYFGKETMKDAASALP-NVG 83

Query: 92  LNIGIPNEDSERHRTRDLICDALGKCKHKIASAVGKAKVMVSETAQEAHDVGEAVAGAFD 151
             I      S RH   +LICDA GKC  ++A+A+GKAK  VS+TA EA+ + +A +G   
Sbjct: 84  HGISQGKAGSGRHSPGELICDAFGKCTQRVATALGKAKDKVSDTAHEANKLKQAASGTAH 143

Query: 152 EAKETVSDK----SHHVGTSFSEKGHRLRESVEKAREDADEFLEKTKETVLEKARDLKEG 211
           EAKE   DK    +  V    SE  H  R+ V   +    + L K K  V++K +D+KE 
Sbjct: 144 EAKEKAKDKAWETAQEVREKVSESAHETRDKVADKKGAIGDALGKAKGAVVQKGQDVKER 203

Query: 212 AKDVLKEGKARDLKEGAKDVLK----------EGKARDLKEGAMEKGREARQTAEKIKTG 271
           AK+ +   KA++    AKD  K            +  +++E AME   EA + A K+KT 
Sbjct: 204 AKESI--DKAKEAATTAKDTAKTMGADIVTNTSEQVENVQEKAME---EAGRAANKVKTS 263

Query: 272 GNKVKENLMGIPDGGLKLVNDSFRYLRSLESWKAAMDVLSLLGFGMALGMGVWTTFISSY 331
            NK                 D  +Y+ S+E+    M +++LLG   A GM VW TFISSY
Sbjct: 264 ANKYL---------------DGLKYMTSMEALNTVMGIVNLLGLATAYGMSVWVTFISSY 323

Query: 332 VLASALPRQQLAVVQSKIYPLYFRAMASSIGMALFGHLFSRTKWMFPIPKNAEVVQGYVL 391
           +LA  LPRQQ  VVQSKIYP+YFRAMA SIGMAL GHL    K     P   EV Q   L
Sbjct: 324 ILAGQLPRQQFGVVQSKIYPVYFRAMAYSIGMALLGHLLWHRKRSISSP--PEVFQAINL 383

Query: 392 VAALLMIFANSLYMEPQATKVMFERLKVEKEEGKGIEDIAAEPRDANDNP---------- 451
           +++L M+  N LY+EP+ATKVMFER+K+EKE+G+G  D  AE   A ++P          
Sbjct: 384 LSSLFMVLVNGLYLEPKATKVMFERMKMEKEDGRGRHDFVAEGSRATESPSVADPVAKNS 443

Query: 452 -----------PAVTTSTATQVVEREAVKSRIVGLNKRLKKLNSYSSLLNLLTLMALTWH 474
                      PA   + A    E+E +K  +  LN+RLKKLN+ SS+LN+LTLMALTWH
Sbjct: 444 RKGPSTAPAPAPAPAPAVAPTSSEQEVIKRTMGRLNERLKKLNTNSSMLNILTLMALTWH 492

[Close]

BLAST of Cp4.1LG13g11760 vs. TrEMBL
Match: W9RNN9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008289 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 7.1e-77
Identity = 210/497 (42.25%), Postives = 298/497 (59.96%), Query Frame = 1


Query: 1   MPNLFALCLVITSLTAAGLWSPSPASRQDHEQDVIVKEGHRVVVVEYGDQGQHNTKVSIS 60
           M N+ +LCLV+TSL  AG+ SP+P  +Q++  D+IVKEGHRVVVVEY  +GQ  TKVSIS
Sbjct: 1   MMNVVSLCLVVTSLVTAGVLSPTP-KKQNNGDDLIVKEGHRVVVVEYDQEGQPITKVSIS 60

Query: 61  SEP-TKDASPSNPLHDSLNIGIPN-----------------EDSERHRTRDLICDALGKC 120
            E  T+    S+ L ++ ++ +PN                  D E    ++LICDA GKC
Sbjct: 61  PEDKTRQRFNSDKLKEAASV-LPNLGQGLSTPKADGGGEGEGDGEWRSPKELICDAYGKC 120

Query: 121 KHKIASAVGKAKVMVSE----TAQEAHDVGEAVAGAFDEAKETVSDKSHHVGTSFSEKGH 180
           KHKI  A+G+ K  VSE     A++  ++ E      ++AKE VS+K+        E GH
Sbjct: 121 KHKIVDAIGRTKEAVSEKAHDVAEKTKEMKEKAEDVVEKAKEAVSEKARGFAEKTRETGH 180

Query: 181 RLRESVEKAREDADEFLEKTKETVLEKARDLKEGA---KDVLKE--GKARD-LKEGAKDV 240
             +++ E+    A  F+EKTKE   E     K+ A   ++  +E  GKA++ ++  A++V
Sbjct: 181 EAQDATERK---AHVFIEKTKEAAHEAVEKKKKAAYRMEEAAEESYGKAKEAVRNKAQEV 240

Query: 241 LKEGKARDLKEGAMEKGREARQTAEKIKTGGNKVKENLMGIPDGGLKLVNDSFRYLRSLE 300
             EG+AR+  E   E  ++A+      KT    V  N+        K    +FR L + +
Sbjct: 241 --EGQARERAEKTWEAAKDAKDVG---KTFVKDVASNVTKFAATFRKQAGATFRELVTGK 300

Query: 301 SWKAAMDVLSLLGFGMALGMGVWTTFISSYVLASALPRQQLAVVQSKIYPLYFRAMASSI 360
           +    + V+ L+ F  A G  VW TFI SYVLA ALPRQQ  VVQSKIYP+YFR MA  I
Sbjct: 301 ALNPVVGVVYLVTFSTAYGTAVWETFILSYVLAGALPRQQFGVVQSKIYPVYFRTMAWGI 360

Query: 361 GMALFGHLFSRTKWMFPIPKNAEVVQGYVLVAALLMIFANSLYMEPQATKVMFERLKVEK 420
           G A+ G L +     F     AE  Q + L+A+L+++F N LY+EP+ATKVMFER++VEK
Sbjct: 361 GTAVLGLLVTGRGKAF--SSMAEKFQIFNLLASLVLVFVNMLYLEPRATKVMFERMRVEK 420

Query: 421 EEGKGIEDIAAEPRDANDNPPAVTTSTATQVVEREAVKSRIVGLNKRLKKLNSYSSLLNL 470
           EEG+G E++ AE   A +  PAV++  A +  E+EAV++RI+ LN RLKKLN++SS LN+
Sbjct: 421 EEGRGREELPAEQPSAAE--PAVSSMPA-ETAEQEAVRNRILSLNGRLKKLNTWSSFLNI 480

[Close]

BLAST of Cp4.1LG13g11760 vs. TrEMBL
Match: A0A067KS45_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10947 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.5e-74
Identity = 218/526 (41.44%), Postives = 290/526 (55.13%), Query Frame = 1


Query: 3   NLFALCLVITSLTAAGLWSPSPASRQDH--EQDVIVKEGHRVVVVEYGDQ--GQHNTKVS 62
           NL AL LV+TSL  A +WSPSP  +  +  E+DVIVKEGHRV+VVE  D   GQHNTK+ 
Sbjct: 2   NLLALSLVLTSLLTAQVWSPSPTGKHQNQKEEDVIVKEGHRVIVVETFDDEGGQHNTKIR 61

Query: 63  IS---------------SEPTKDASPSNP-LHDSLNIGIPNEDSERHRTR------DLIC 122
           IS                E  K A+   P L   L+      DS  ++ +      +LIC
Sbjct: 62  ISPPQDSISSVGVIENAKEKVKQAAHVLPNLGQGLSSSGYGPDSGSYQDKITTGPGELIC 121

Query: 123 DALGKCKHKIASAVGKAKVMVSETAQEAHDVGEAVAGAFDEAKETVSDKSHHVGTSFSEK 182
           DA GKC+HKIA  + KAK  V +          A  GA  + KE +     H     +++
Sbjct: 122 DAFGKCRHKIAKVIDKAKEKVED----------AYGGATHQTKEII-----HEAKEIAQE 181

Query: 183 GH-RLRESVEKAREDADEFLEKTKETVLEKARDLKEGAKDVLKEG------KARDLKEGA 242
           G  R +    +A++  ++  EKTKETV  KA + KE  +D  ++       KA+++KE A
Sbjct: 182 GIIRKKRIAHEAKDKVEDACEKTKETVSHKAHEAKEVVEDAYEKAKDSGTQKAQEVKESA 241

Query: 243 KDVLKEGKARDLKEGAMEKGR-----EARQTAEKIKTGGNKVKENLMGIPDGGLKLVNDS 302
           K+ L   KA+D+ + A + G+       +  +EK     N V  +L           N +
Sbjct: 242 KESL--DKAKDIAKDAKDLGKTIGVDSVKNVSEKTGQATNIVYNSL-----------NRA 301

Query: 303 FRYLRSLESWKAAMDVLSLLGFGMALGMGVWTTFISSYVLASALPRQQLAVVQSKIYPLY 362
           FR++ S +     M V++LLGF +A GM  W TFISSYVLA+AL RQQ  +VQSKIYP+Y
Sbjct: 302 FRFMGSQKGIHFLMGVINLLGFSIAYGMCFWVTFISSYVLANALNRQQFGLVQSKIYPVY 361

Query: 363 FRAMASSIGMALFGHLFSRTKWMFPIPKNAEVVQGYVLVAALLMIFANSLYMEPQATKVM 422
           FRAM   I +ALFGHL  R K+ F     AEV Q   L+ ++L++  N+LY+EP ATKVM
Sbjct: 362 FRAMGFCIAVALFGHLIGRMKFSF--TSKAEVFQAINLLLSVLLVLINALYLEPLATKVM 421

Query: 423 FERLKVEKEEGKGIEDIAAEPRDANDNP------------PAVTT--STATQVVE---RE 474
           F++LK+EKEEG+G E    E   A   P             A TT  S  T+V E    E
Sbjct: 422 FDKLKIEKEEGRGRETSTTESNRAEQEPVADASPATALGSTATTTGSSAPTKVPENRKEE 481

[Close]

BLAST of Cp4.1LG13g11760 vs. TrEMBL
Match: A0A103P142_CYNCS (Uncharacterized protein (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_026525 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69
Identity = 194/508 (38.19%), Postives = 286/508 (56.30%), Query Frame = 1


Query: 1   MPNLFALCLVITSLTAAGLWSPSPASRQDHEQDVIVKEGHRVVVVEYGDQGQHNTKVSIS 60
           M N+ AL LV+TSL    +WSP P    D+ ++VIVK GHRV+VVEY  +G  NTKV IS
Sbjct: 60  MMNILALGLVLTSLVTGAVWSPPPPP--DNREEVIVKGGHRVIVVEYEKEGDGNTKVLIS 119

Query: 61  S-EPTKDASPSNPLHDSLNIGIPNEDSERH--RTRDLICDALGKCKHKIASAVGKAKVMV 120
             +P+     S     S +   P +D+E    R R+L+CDA GKCKHKIA+A G+ K  V
Sbjct: 120 PHDPSASGVDSTDTCHSADGNPPVDDAEAKFSRPRELVCDAFGKCKHKIANAFGRTKDKV 179

Query: 121 SETAQEAHD-VGEAVAGAFDEAKETVSDKSHHVGTSFSE---KGHRLRESVEKAREDADE 180
           S+TAQ+  +   EA +GA  +AK+TV      +  + +E   KG +  + + +A+    E
Sbjct: 180 SDTAQDIEEHAKEAASGAVGKAKDTVYGYEERMKGAANEAFGKGKQAAKDINEAKSKLAE 239

Query: 181 FLEKTKETVLEKAR-----DLKEGAKDVLKEG------KARDLKEGAKDVLKEGKARDLK 240
            + +  E + +KA+     +  + AKD + +G       A D+ E  +D   + K+ D+ 
Sbjct: 240 KVSEKIEGIEDKAKGAAIGESLDNAKDSIAQGIGKAKKVAGDVMETVRDSATKAKSFDMV 299

Query: 241 EGAMEKGRE-ARQTAEKIKTGGNKVKE-------NLMGIPDGGL--------KLVNDSFR 300
           +     G +  R  + +++ G   V E       N+  +    L        +++ D F 
Sbjct: 300 DSPKRIGEDIQRNVSGRVEEGAEHVMEQAKEAAANVQKVGQKSLGEIISKLKEVMYDVFW 359

Query: 301 YLRSLESWKAAMDVLSLLGFGMALGMGVWTTFISSYVLASALPRQQLAVVQSKIYPLYFR 360
           Y+ S E   A + ++ +LGF  A GM +W TF+SSY+L   LPRQQ  +VQS+IYP+YF+
Sbjct: 360 YMVSPEKVDAVVGLIHMLGFSTAYGMCMWVTFVSSYILGRYLPRQQFGMVQSRIYPVYFK 419

Query: 361 AMASSIGMALFGHLFSRTKWMFPIPKNAEVVQGYVLVAALLMIFANSLYMEPQATKVMFE 420
           AMA  +G AL GHL SR K      K  E+ QG  L++ALLM+  N +++EP++TKVMFE
Sbjct: 420 AMAYCVGAALLGHLVSRRKESLSSIK--EIFQGLSLLSALLMVLINMIWLEPRSTKVMFE 479

Query: 421 RLKVEKEEGKGI-----EDIAAEPRDANDNPPAVTTSTATQVVEREAVKSRIVGLNKRLK 470
           R+K+EKEEG+GI     E IA    D    PPA             A +  ++ +N++LK
Sbjct: 480 RMKIEKEEGRGIAGAVREGIADNGSDTVVRPPANVA----------AERQDVLRMNEKLK 539

[Close]

BLAST of Cp4.1LG13g11760 vs. TAIR10
Match: AT1G72100.1 (AT1G72100.1 late embryogenesis abundant domain-containing protein / LEA domain-containing protein)

HSP 1 Score: 238.8 bits (608), Expect = 6.8e-63
Identity = 192/524 (36.64%), Postives = 271/524 (51.72%), Query Frame = 1


Query: 1   MPNLFALCLVITSLTAAGLWSPSPASRQDH-----EQDVIVKEGHRVV------------ 60
           M NL ALCLV+++L AA +WSPSPA    +     E +VIVK+GH VV            
Sbjct: 1   MTNLLALCLVLSTLLAAEVWSPSPAMTTHNTAVASEGEVIVKDGHHVVVVEYDRDGKTNT 60

Query: 61  -------VVEYGDQGQHNTKVSIS-----SEPTKDASPSNPLHDSLNIGIP---NEDSER 120
                    + G++ ++  ++  S      E  K+ +   P H    I  P   +E  + 
Sbjct: 61  RVSISPPSADQGEEKENEVEMGTSMFRNVKEKAKETASYLP-HVGQGISQPVMTDEARDH 120

Query: 121 HRTR-DLICDALGKCKHKIASAVGKAKVM----VSETAQE--------AHDVGEAVAGAF 180
           H T  ++ICDA GKC+ KIAS VG+AK      V ETA +        AHDV E V  A 
Sbjct: 121 HATAGEVICDAFGKCRQKIASVVGRAKDRTVDSVGETASDVREAAAHKAHDVKETVTHAA 180

Query: 181 DEAKETVSDKSHHVGTSFSEKGHRLRESVEKAREDADEFLEKTKETVLEKARDLKEGAKD 240
            + ++TV+D++ +     +EK H  +E V     DA       KE+V +KA D KE    
Sbjct: 181 RDVEDTVADQAQYAKGRVTEKAHDPKEGVAHKAHDA-------KESVADKAHDAKESVAQ 240

Query: 241 VLKEGKARDLKEGAKDVLKEGKARDLKEGAMEKGREARQTA-EKIKTGGNKVKENLMGIP 300
                KA D KE  ++     KA D+KE   +K  E+++ A ++++    ++KE      
Sbjct: 241 -----KAHDAKEKVRE-----KAHDVKETVAQKAHESKERAKDRVREKAQELKETATHKS 300

Query: 301 DGGLKLVNDSFRYLRS-----LESWKAAMDVLSLLGFGMALGMGVWTTFISSYVLASALP 360
               + V +  R   S     L   K A  ++ L G   A G  VW TF+SSYVLAS L 
Sbjct: 301 KNAWERVKNGAREFGSATAATLSPTKVA-SIVGLTGIAAAFGTSVWVTFVSSYVLASVLG 360

Query: 361 RQQLAVVQSKIYPLYFRAMASSIGMALFGHLFSRTKWMFPIPKNAEVVQGYVLVAALLMI 420
           RQQ  VVQSK+YP+YF+A +  I + LFGH+ SR + +  +    E+ QG  L+++  MI
Sbjct: 361 RQQFGVVQSKLYPVYFKATSVGILVGLFGHVLSRRRKL--LTDATEMWQGVNLLSSFFMI 420

Query: 421 FANSLYMEPQATKVMFERLKVEKEEGKGIEDIAAEPRDANDNPPAVTTSTATQVVEREAV 474
            AN  ++EP+ATK MFER+K EKEEG+G E                   T+ Q + R   
Sbjct: 421 EANKSFVEPRATKAMFERMKAEKEEGRGGE------------------RTSEQELRR--- 480

[Close]

BLAST of Cp4.1LG13g11760 vs. TAIR10
Match: AT1G22600.1 (AT1G22600.1 Late embryogenesis abundant protein (LEA) family protein)

HSP 1 Score: 140.6 bits (353), Expect = 2.5e-33
Identity = 112/364 (30.77%), Postives = 186/364 (51.10%), Query Frame = 1


Query: 119 ETAQEAHDVGEAVAGAFDEAKETVS------DKSHHVGTSFSEKGHRLRESVEKAREDAD 178
           E  Q++ D GE      +E +ET S      ++ HH     +  G  + +++ K +    
Sbjct: 58  EVDQKSRDEGEVFG---NEKRETASSLPEEEEREHH-----ATPGELICDAIGKCKHKLG 117

Query: 179 EFLEKTKETVLEKARDLKEGAKDVLKEGKARDLKEGAKDVLKEGKARDLKEGAMEKGREA 238
             L + K+     A DL +   ++    +A +++E      +E + + + E A +K    
Sbjct: 118 TVLGRVKDRT---ASDLSDETPEMTVAREALEVEEKVSWKAREARGK-VNERATKKAHRV 177

Query: 239 RQTAEKIKT---GGNKVKENLMGIPDGGLKLVNDSFRYLRSLESWKAAMDVLSLLGFGMA 298
           ++  EK++    G   V    +G+   G                      V+ ++G   A
Sbjct: 178 QKVLEKVQIAVRGIGTVVATALGLTKIG---------------------SVVGIVGIAAA 237

Query: 299 LGMGVWTTFISSYVLASALPRQQLAVVQSKIYPLYFRAMASSIGMALFGHLFSRTKWMFP 358
            GM VW TF+S YVLAS L  QQ  VVQSK+YP+YF+A++  I + L GH+  R + +F 
Sbjct: 238 YGMCVWVTFVSGYVLASVLGEQQFGVVQSKMYPVYFKAVSVGILVGLLGHVIGRRRKVF- 297

Query: 359 IPKNAEVVQGYVLVAALLMIFANSLYMEPQATKVMFERLKVEKEEGKGIEDIAAEPRDAN 418
                ++ Q   L++++LM+ AN+ ++  +ATK MFE +K EKE+G+G  D + + + + 
Sbjct: 298 -TDAVDMWQSVNLLSSILMVEANASFVYTRATKAMFELIKAEKEDGRGF-DTSDQSQSSE 357

Query: 419 DNPPAVTTSTATQVVEREAVKSRIVGLNKRLKKLNSYSSLLNLLTLMALTWHLVYLSQRL 474
                      T+  + + VK R+  L++R++KLN+YSS LNLLTLM+LTWH VYL  RL
Sbjct: 358 SAGRTRGKKKVTEKTDEDVVKQRLTKLSERMRKLNAYSSRLNLLTLMSLTWHFVYLGYRL 385

[Close]

BLAST of Cp4.1LG13g11760 vs. NCBI nr
Match: gi|659119380|ref|XP_008459625.1| (PREDICTED: uncharacterized protein LOC103498695 [Cucumis melo])

HSP 1 Score: 525.4 bits (1352), Expect = 1.0e-145
Identity = 312/478 (65.27%), Postives = 351/478 (73.43%), Query Frame = 1


Query: 1   MPNLFALCLVITSLTAAGLWSPSPASRQDHEQDVIVKEGHRVVVVEYGDQGQHNTKVSIS 60
           M NLFA+ L+IT+LTAAGLWSP P       Q+VIVKEGHRVVVVEY DQGQHNTKVSIS
Sbjct: 17  MTNLFAMFLIITTLTAAGLWSPPPPP-----QNVIVKEGHRVVVVEYDDQGQHNTKVSIS 76

Query: 61  SEPTKDASPSNPLHDSLNIGIPNEDSERHRTRDLICDALGKCKHKIASAVGKAKVMVSET 120
           SEP  DA                ++SERHRT+DLICD  GKCKHK+ASAV KAKVMV+ET
Sbjct: 77  SEPDLDA----------------KNSERHRTKDLICDVYGKCKHKVASAVEKAKVMVTET 136

Query: 121 AQEAHDVGEAVAGAFDEAKETVSDKSHHVGTSFSEKGHRLRESVEKAREDADEFLEKTKE 180
           AQEAHDVGE+VAGAFDEAK                                D+  E  KE
Sbjct: 137 AQEAHDVGESVAGAFDEAK--------------------------------DKLKEGAKE 196

Query: 181 TVLEKARDLKEGAKDVLKE-GKARD-LKEGAKDVLKEGKARDLKEGAMEKGRE--ARQTA 240
           T  E    LKEGAK   +  G+A+D LKEGAK+ L+  K+R+ K   + KG E  A++T 
Sbjct: 197 TFGEAKDKLKEGAKGAKETFGEAKDKLKEGAKETLEMAKSREEK---VVKGAERVAKETG 256

Query: 241 EKIKTGGNKVKENLMGIPDGGLKLVNDSFRYLRSLESWKAAMDVLSLLGFGMALGMGVWT 300
           EKI+TG NK+KENLMG+ D G K++N  FR+L         MD L LLGF MALGMGVW 
Sbjct: 257 EKIQTGENKLKENLMGLVDRGFKVMNYLFRHLG------VGMDALGLLGFAMALGMGVWV 316

Query: 301 TFISSYVLASALPRQQLAVVQSKIYPLYFRAMASSIGMALFGHLFSRTKWMFPIPKNAEV 360
           TFISSYVLAS LPRQQL VVQSKIYP+YF+AMAS IGMAL GHLFSRT+W FPIPKN+EV
Sbjct: 317 TFISSYVLASVLPRQQLGVVQSKIYPVYFKAMASCIGMALLGHLFSRTEWKFPIPKNSEV 376

Query: 361 VQGYVLVAALLMIFANSLYMEPQATKVMFERLKVEKEEGKGIEDIAAEPR-DANDNPPAV 420
           VQGYVLVAALLMIFANSLYMEP+ATKVMFERLK+EKEEG+GIEDI  E   +  DN PA+
Sbjct: 377 VQGYVLVAALLMIFANSLYMEPRATKVMFERLKIEKEEGRGIEDIGREETVNVIDNSPAI 432

Query: 421 TTSTATQVVEREAVKSRIVGLNKRLKKLNSYSSLLNLLTLMALTWHLVYLSQRLCIPC 474
           T+ST TQ+V+RE VKSRIVGLNKRLKKLNSYSSLLNLLTLMALTWHLVYLSQRLC PC
Sbjct: 437 TSSTPTQIVDREVVKSRIVGLNKRLKKLNSYSSLLNLLTLMALTWHLVYLSQRLCNPC 432

[Close]

BLAST of Cp4.1LG13g11760 vs. NCBI nr
Match: gi|778707978|ref|XP_004141640.2| (PREDICTED: uncharacterized protein LOC101208468 [Cucumis sativus])

HSP 1 Score: 362.1 bits (928), Expect = 1.5e-96
Identity = 223/368 (60.60%), Postives = 267/368 (72.55%), Query Frame = 1


Query: 111 GKAKVMVSETAQEAHDVGEAVAGAFDE-AKETVSDKSHH-VGTSFSEKGHRLRESVEKAR 170
           G   V+V    Q  H+   +++   D+ AK +   ++   +   + +  H++  +VEKA+
Sbjct: 50  GHRMVVVEYDDQGQHNTKVSISSEPDQDAKNSERHRTKDLICDVYGKCKHKVASAVEKAK 109

Query: 171 EDADEFLEKTKETVLEKARDLKEGAKDVLKEGKARDLKEGAKDVLKEGKARDLKEGAMEK 230
               E  ++  + V E   D  +GAKD         LKEGAK+ L+  K+R+ K   + K
Sbjct: 110 VMVTETAQEAHD-VGESVTDAFDGAKD--------KLKEGAKETLEMAKSREEK---VVK 169

Query: 231 GRE--ARQTAEKIKTGGNKVKENLMGIPDGGLKLVNDSFRYLRSLESWKAAMDVLSLLGF 290
           G E  A++T EKIKTG NK+KENLMG+ D G K+++  FR+L         MD L LLGF
Sbjct: 170 GAERVAKETGEKIKTGENKLKENLMGLVDRGFKVIDYLFRHLGF------GMDALGLLGF 229

Query: 291 GMALGMGVWTTFISSYVLASALPRQQLAVVQSKIYPLYFRAMASSIGMALFGHLFSRTKW 350
            MALGMGVW TFISSYVLAS LPRQQL VVQSKIYP+YF+AMAS IGMAL GHLFSRT+W
Sbjct: 230 TMALGMGVWVTFISSYVLASVLPRQQLGVVQSKIYPVYFKAMASCIGMALLGHLFSRTEW 289

Query: 351 MFPIPKNAEVVQGYVLVAALLMIFANSLYMEPQATKVMFERLKVEKEEGKGIEDIAAEPR 410
            FPIPKN+EVVQGYVLVAALLMIFANSLYMEP+ATKVMFERLK+EKEEG+GIEDIA E  
Sbjct: 290 TFPIPKNSEVVQGYVLVAALLMIFANSLYMEPRATKVMFERLKIEKEEGRGIEDIAREET 349

Query: 411 -DANDNPPAVTTSTATQVVEREAVKSRIVGLNKRLKKLNSYSSLLNLLTLMALTWHLVYL 470
            +  DN PA+T+ST TQVV+RE VKSRIVGLNKRLKKLNSYSSLLNLLTLMALTWHLVYL
Sbjct: 350 GNVIDNSPAITSSTPTQVVDREVVKSRIVGLNKRLKKLNSYSSLLNLLTLMALTWHLVYL 399

Query: 471 SQRLCIPC 474
           SQRLC PC
Sbjct: 410 SQRLCNPC 399

[Close]

BLAST of Cp4.1LG13g11760 vs. NCBI nr
Match: gi|700197506|gb|KGN52683.1| (hypothetical protein Csa_5G650480 [Cucumis sativus])

HSP 1 Score: 362.1 bits (928), Expect = 1.5e-96
Identity = 223/368 (60.60%), Postives = 267/368 (72.55%), Query Frame = 1


Query: 111 GKAKVMVSETAQEAHDVGEAVAGAFDE-AKETVSDKSHH-VGTSFSEKGHRLRESVEKAR 170
           G   V+V    Q  H+   +++   D+ AK +   ++   +   + +  H++  +VEKA+
Sbjct: 28  GHRMVVVEYDDQGQHNTKVSISSEPDQDAKNSERHRTKDLICDVYGKCKHKVASAVEKAK 87

Query: 171 EDADEFLEKTKETVLEKARDLKEGAKDVLKEGKARDLKEGAKDVLKEGKARDLKEGAMEK 230
               E  ++  + V E   D  +GAKD         LKEGAK+ L+  K+R+ K   + K
Sbjct: 88  VMVTETAQEAHD-VGESVTDAFDGAKD--------KLKEGAKETLEMAKSREEK---VVK 147

Query: 231 GRE--ARQTAEKIKTGGNKVKENLMGIPDGGLKLVNDSFRYLRSLESWKAAMDVLSLLGF 290
           G E  A++T EKIKTG NK+KENLMG+ D G K+++  FR+L         MD L LLGF
Sbjct: 148 GAERVAKETGEKIKTGENKLKENLMGLVDRGFKVIDYLFRHLGF------GMDALGLLGF 207

Query: 291 GMALGMGVWTTFISSYVLASALPRQQLAVVQSKIYPLYFRAMASSIGMALFGHLFSRTKW 350
            MALGMGVW TFISSYVLAS LPRQQL VVQSKIYP+YF+AMAS IGMAL GHLFSRT+W
Sbjct: 208 TMALGMGVWVTFISSYVLASVLPRQQLGVVQSKIYPVYFKAMASCIGMALLGHLFSRTEW 267

Query: 351 MFPIPKNAEVVQGYVLVAALLMIFANSLYMEPQATKVMFERLKVEKEEGKGIEDIAAEPR 410
            FPIPKN+EVVQGYVLVAALLMIFANSLYMEP+ATKVMFERLK+EKEEG+GIEDIA E  
Sbjct: 268 TFPIPKNSEVVQGYVLVAALLMIFANSLYMEPRATKVMFERLKIEKEEGRGIEDIAREET 327

Query: 411 -DANDNPPAVTTSTATQVVEREAVKSRIVGLNKRLKKLNSYSSLLNLLTLMALTWHLVYL 470
            +  DN PA+T+ST TQVV+RE VKSRIVGLNKRLKKLNSYSSLLNLLTLMALTWHLVYL
Sbjct: 328 GNVIDNSPAITSSTPTQVVDREVVKSRIVGLNKRLKKLNSYSSLLNLLTLMALTWHLVYL 377

Query: 471 SQRLCIPC 474
           SQRLC PC
Sbjct: 388 SQRLCNPC 377

[Close]

BLAST of Cp4.1LG13g11760 vs. NCBI nr
Match: gi|823264374|ref|XP_012464930.1| (PREDICTED: uncharacterized protein LOC105783816 isoform X2 [Gossypium raimondii])

HSP 1 Score: 307.0 bits (785), Expect = 5.8e-80
Identity = 208/481 (43.24%), Postives = 273/481 (56.76%), Query Frame = 1


Query: 33  DVIVKEGHRVVVVEYGDQGQHNTKVSISS-----EPTKDASPSNPLHDSLNIGIPNEDSE 92
           DVI+KEGHRV+VVEY   G+HNTKVSISS     +  +DA+ + P +    I      S 
Sbjct: 25  DVILKEGHRVIVVEYDQDGKHNTKVSISSPSLHQQTDQDAASALP-NVGHGISQGKAGSG 84

Query: 93  RHRTRDLICDALGKCKHKIASAVGKAKVMVSETAQEAHDVGEAVAGAFDEAKETVSDK-- 152
           RH   +LICDA GKC  ++A+A+GKAK  VS+TA EA+ + +A +G   EAKE   DK  
Sbjct: 85  RHSPGELICDAFGKCTQRVATALGKAKDKVSDTAHEANKLKQAASGTAHEAKEKAKDKAW 144

Query: 153 --SHHVGTSFSEKGHRLRESVEKAREDADEFLEKTKETVLEKARDLKEGAKDVLKEGKAR 212
             +  V    SE  H  R+ V   +    + L K K  V++K +D+KE AK+ +   KA+
Sbjct: 145 ETAQEVREKVSESAHETRDKVADKKGAIGDALGKAKGAVVQKGQDVKERAKESI--DKAK 204

Query: 213 DLKEGAKDVLK----------EGKARDLKEGAMEKGREARQTAEKIKTGGNKVKENLMGI 272
           +    AKD  K            +  +++E AME   EA + A K+KT  NK        
Sbjct: 205 EAATTAKDTAKTMGADIVTNTSEQVENVQEKAME---EAGRAANKVKTSANKYL------ 264

Query: 273 PDGGLKLVNDSFRYLRSLESWKAAMDVLSLLGFGMALGMGVWTTFISSYVLASALPRQQL 332
                    D  +Y+ S+E+    M +++LLG   A GM VW TFISSY+LA  LPRQQ 
Sbjct: 265 ---------DGLKYMTSMEALNTVMGIVNLLGLATAYGMSVWVTFISSYILAGQLPRQQF 324

Query: 333 AVVQSKIYPLYFRAMASSIGMALFGHLFSRTKWMFPIPKNAEVVQGYVLVAALLMIFANS 392
            VVQSKIYP+YFRAMA SIGMAL GHL    K     P   EV Q   L+++L M+  N 
Sbjct: 325 GVVQSKIYPVYFRAMAYSIGMALLGHLLWHRKRSISSP--PEVFQAINLLSSLFMVLVNG 384

Query: 393 LYMEPQATKVMFERLKVEKEEGKGIEDIAAEPRDANDNP--------------------- 452
           LY+EP+ATKVMFER+K+EKE+G+G  D  AE   A ++P                     
Sbjct: 385 LYLEPKATKVMFERMKMEKEDGRGRHDFVAEGSRATESPSVADPVAKNSRKGPSTAPAPA 444

Query: 453 PAVTTSTATQVVEREAVKSRIVGLNKRLKKLNSYSSLLNLLTLMALTWHLVYLSQRLCIP 474
           PA   + A    E+E +K  +  LN+RLKKLN+ SS+LN+LTLMALTWHLVYL QRL   
Sbjct: 445 PAPAPAVAPTSSEQEVIKRTMGRLNERLKKLNTNSSMLNILTLMALTWHLVYLGQRLTFN 482

[Close]

BLAST of Cp4.1LG13g11760 vs. NCBI nr
Match: gi|823264372|ref|XP_012464929.1| (PREDICTED: uncharacterized protein LOC105783816 isoform X1 [Gossypium raimondii])

HSP 1 Score: 305.4 bits (781), Expect = 1.7e-79
Identity = 210/492 (42.68%), Postives = 273/492 (55.49%), Query Frame = 1


Query: 32  QDVIVKEGHRVVVVEYGDQGQHNTKVSISS---------------EPTKDASPSNPLHDS 91
            DVI+KEGHRV+VVEY   G+HNTKVSISS               E  KDA+ + P +  
Sbjct: 24  DDVILKEGHRVIVVEYDQDGKHNTKVSISSPSLHQQTDQGEYFGKETMKDAASALP-NVG 83

Query: 92  LNIGIPNEDSERHRTRDLICDALGKCKHKIASAVGKAKVMVSETAQEAHDVGEAVAGAFD 151
             I      S RH   +LICDA GKC  ++A+A+GKAK  VS+TA EA+ + +A +G   
Sbjct: 84  HGISQGKAGSGRHSPGELICDAFGKCTQRVATALGKAKDKVSDTAHEANKLKQAASGTAH 143

Query: 152 EAKETVSDK----SHHVGTSFSEKGHRLRESVEKAREDADEFLEKTKETVLEKARDLKEG 211
           EAKE   DK    +  V    SE  H  R+ V   +    + L K K  V++K +D+KE 
Sbjct: 144 EAKEKAKDKAWETAQEVREKVSESAHETRDKVADKKGAIGDALGKAKGAVVQKGQDVKER 203

Query: 212 AKDVLKEGKARDLKEGAKDVLK----------EGKARDLKEGAMEKGREARQTAEKIKTG 271
           AK+ +   KA++    AKD  K            +  +++E AME   EA + A K+KT 
Sbjct: 204 AKESI--DKAKEAATTAKDTAKTMGADIVTNTSEQVENVQEKAME---EAGRAANKVKTS 263

Query: 272 GNKVKENLMGIPDGGLKLVNDSFRYLRSLESWKAAMDVLSLLGFGMALGMGVWTTFISSY 331
            NK                 D  +Y+ S+E+    M +++LLG   A GM VW TFISSY
Sbjct: 264 ANKYL---------------DGLKYMTSMEALNTVMGIVNLLGLATAYGMSVWVTFISSY 323

Query: 332 VLASALPRQQLAVVQSKIYPLYFRAMASSIGMALFGHLFSRTKWMFPIPKNAEVVQGYVL 391
           +LA  LPRQQ  VVQSKIYP+YFRAMA SIGMAL GHL    K     P   EV Q   L
Sbjct: 324 ILAGQLPRQQFGVVQSKIYPVYFRAMAYSIGMALLGHLLWHRKRSISSP--PEVFQAINL 383

Query: 392 VAALLMIFANSLYMEPQATKVMFERLKVEKEEGKGIEDIAAEPRDANDNP---------- 451
           +++L M+  N LY+EP+ATKVMFER+K+EKE+G+G  D  AE   A ++P          
Sbjct: 384 LSSLFMVLVNGLYLEPKATKVMFERMKMEKEDGRGRHDFVAEGSRATESPSVADPVAKNS 443

Query: 452 -----------PAVTTSTATQVVEREAVKSRIVGLNKRLKKLNSYSSLLNLLTLMALTWH 474
                      PA   + A    E+E +K  +  LN+RLKKLN+ SS+LN+LTLMALTWH
Sbjct: 444 RKGPSTAPAPAPAPAPAVAPTSSEQEVIKRTMGRLNERLKKLNTNSSMLNILTLMALTWH 492

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g11760 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG13g11760 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSX1_CUCSA	1.1e-96	60.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650480 PE=4 SV=1	[more]
A0A0D2SDT7_GOSRA	1.2e-79	42.68	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G138700 PE=4 SV=1	[more]
W9RNN9_9ROSA	7.1e-77	42.25	Uncharacterized protein OS=Morus notabilis GN=L484_008289 PE=4 SV=1	[more]
A0A067KS45_JATCU	1.5e-74	41.44	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10947 PE=4 SV=1	[more]
A0A103P142_CYNCS	1.1e-69	38.19	Uncharacterized protein (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_0...	[more]

BLAST of Cp4.1LG13g11760 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G72100.1	6.8e-63	36.64	late embryogenesis abundant domain-containing protein / LEA domain-c...	[more]
AT1G22600.1	2.5e-33	30.77	Late embryogenesis abundant protein (LEA) family protein	[more]

BLAST of Cp4.1LG13g11760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119380\|ref\|XP_008459625.1\|	1.0e-145	65.27	PREDICTED: uncharacterized protein LOC103498695 [Cucumis melo]	[more]
gi\|778707978\|ref\|XP_004141640.2\|	1.5e-96	60.60	PREDICTED: uncharacterized protein LOC101208468 [Cucumis sativus]	[more]
gi\|700197506\|gb\|KGN52683.1\|	1.5e-96	60.60	hypothetical protein Csa_5G650480 [Cucumis sativus]	[more]
gi\|823264374\|ref\|XP_012464930.1\|	5.8e-80	43.24	PREDICTED: uncharacterized protein LOC105783816 isoform X2 [Gossypium raimondii]	[more]
gi\|823264372\|ref\|XP_012464929.1\|	1.7e-79	42.68	PREDICTED: uncharacterized protein LOC105783816 isoform X1 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025423	DUF4149

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g11760.1	Cp4.1LG13g11760.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025423	Domain of unknown function DUF4149	PFAM	PF13664	DUF4149	coord: 285..387 score: 7.9
None	No IPR available	unknown	Coil	Coil	coord: 183..203 scor
None	No IPR available	PANTHER	PTHR23241	LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATED	coord: 258..473 score: 5.5
None	No IPR available	PANTHER	PTHR23241:SF50	LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN-RELATED	coord: 258..473 score: 5.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG13g11760	CmaCh15G000020	Cucurbita maxima (Rimu)	cmacpeB305
Cp4.1LG13g11760	CmoCh15G000010	Cucurbita moschata (Rifu)	cmocpeB268
Cp4.1LG13g11760	Cla011951	Watermelon (97103) v1	cpewmB197
Cp4.1LG13g11760	ClCG11G008550	Watermelon (Charleston Gray)	cpewcgB162

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None