Cp4.1LG13g10800 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG13g10800
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMitochondrial glycoprotein family protein
LocationCp4.1LG13 : 6743778 .. 6746421 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACAACACACAACCTCTACAGCAAAATCGAAGGAAAATGTTGAAGAAAGTGACGGCCGTCGCTGCGGTGGCTTTACGGGGTAGCCGCCGGCCGTCTCTCATGGCCACTTGCCGCCGTTCGACCTCCGTGTCTACTGCCGTCAATTCATTGCTCCTCCGCTCCCTCAAAGAACACTATCTCGAGATCTCCAGAATGACGCCTCCTCCTGTAAGGTTTCTATTGCTTTGTCCTCTGTTTTCAATTGCTAAACCCTAGAATTAGGGTTTTAAGCTATACGAAGATCGTTTGTTCATCTTACTTGGTTTACTTCTTTTTATCGCAGAAAGTGAGCCCTCCGTCTTCCTTTTCTATCATTAAAGGCGCACTAGACGGCAATGGGCCGGTGCTTACTAGGAGCTACGGCAATGAAGAGATTAACGTTTCGGTTATGCGATTGGCTAATATTGTTCCCGGAGGCGGTGGAGACGATGGAGACGACGAAATTAACCAGTTGTTTCTTCATCTGACTGTATCAAAGCCGGAGCAGAGGGAAAGTTTACATTTTCTTTGTGGATTGTATCCCGATGCATTAGGTATTCATTCCGTTTCGATGAGACCAAAAGCTGAGTCCTCGGGGTTTCTCGTTGTTCCGTCCGGCTATAATGGTCCCGTGTTCGAGTAAGTTTAATGTCTTTTATCCAGAGTGTTTGAACAATTTTATTTAATCGGCAATGCTTCTATATCTCTGCAGGATATGGTACTATTTTAAAGTAAGTTAGCCTTGTTAGACGAACCCCACGACTCTCCACGATGGTACGATATTGTCCACTTTGAGCATAAGCTATCATGGATTTGCTTTGGGCTTCCCCAAAAGGCCTCAAATGTTGGATGATGAAAGTCCCACGTCGGCTAATTTAGGGAATGATCATGGGTTGATAAACAAAGAATATTAACTCCATTGGCACGAGGCCTTTTGGGGAAACCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCACTGTGGAGAGTCATGTTCGTCTAACAAGCCTCAATTATTAGGCTTATTGTGCAGTCTGTTGCCTCATGTTTAGTGATAGTTAACATATTAGTCAAGTAGTTCGAGCAATGTTGCTCATGGCACCAATTAGAGAAATGCTTATAATTTAGATCCCATGTCTCAATTTTTAGTGTTATCATCTAAACTAACAAAAACTGAATCATTTTCTCCTAGTAAAGTAATCGAAGGAGTTAGATCTAAGTAAAGGTCATGAGTTCAGGATTTGTTGCTGCATACAATTTGCTGCCAAGAATCTGTAATTTAAAACCGAACAAGAACAACACGACCCATTTGGCAATGAACTATTCTGGGTTGCTAGTTTTGGTTTGCAGGTTAAAGATATCAGTTAACTTTCTTTAGTATATTTTGTTTATTGCCTAAGGAGCTTATCATTCTAGTTTCCACTGTTTGAATTCTTCATTGCAGCTACCTATTTTGTTCCTTAACTTGCAGGCTGCAGCCTCTGATTTCTTTTCTTTGGTTACAAACTTAAACTTAGAGATTTAATTTTTTTCACTTGGTTACAAACTTGATTGAATCCCTTATATCATGTCATTCACTTGGGATGCTTGCAATTAGCACCAGCATCATAGAATAGTGCAAATTTGAAGTGATACTGTAGTTCATATTGTTACTCTGCTTGGATCATTGGCTAAAGCAAAATTTCCCAATGGGTTAGGGCATCCCCTAAGTAAGCCAACCTGGATAGCAACGTGTAAGAGAATATGTATCGAATCCAATATATAACTTTGCCTTTCTTGTGTTAAAACACTTAGTAAGTTAGTACCCTTTGGTTTGGTTGAGTAGTTCTCTTTGCTCTGATTTGGCTTGTGTTCTTGTATGGCCTAGTTCTATAATCCTTTATATTTATTTTTATGAAAGCTATCTCTTACTAAATAGTCTTTTTTTTCATCATAGTTGGCCTAGATATGGTGTCTAAGGGTCATGATGGTAGTTCTTCTTTTCATAGCATATATGTCAGTTTTTTATTGAACCAAGTGGGATTGTGATGTTAATCCTTATGATTTTCATATGCTTATAATCTCGACCAAATTACTGTTGTGGGAAATCATGTCATAAGAAAACTTACCCTTAATGTTTCTTTGTATAACAGAGATCTGGATGAGAAAATGCGAGATGTACTTCACAATTACATAGAGGAGCGAGGTATAAACGAGTCTCTCTTTCCATTTCTTCAGGCATGGCTTTATGTGAAAGAGCATCGAAATCTTATGCGGTGGTTCAGATCCGTTGGCTCGTTCATCAACGAGCCCAAGAACGCTAAAGTGGATTGATAGTTCATGTATTGGATAGGAAAATATGTGGAATTCAGGGTTCCATCTTCATAATTGGTTAGTTGTATAAGGTAAATGGTCTTATTTCATTTTAAGATACAATTTTGCAAGCCCCTATGTGGTGATTCAGTCTCTCCTTGTTAGCCATGGTTTTTGTTTTCCAAAGTTGATTAACAGTGCTATATATTGCAGCTTTATTCTTATGGATTTTCTTCTTATACCTTAGAAAGTTGTAGTTAAATTTTGTTATCTACACTCAAATGGATGCATTTCTCGAGTACCGACCCTCGTTCAAATT

mRNA sequence

AACAACACACAACCTCTACAGCAAAATCGAAGGAAAATGTTGAAGAAAGTGACGGCCGTCGCTGCGGTGGCTTTACGGGGTAGCCGCCGGCCGTCTCTCATGGCCACTTGCCGCCGTTCGACCTCCGTGTCTACTGCCGTCAATTCATTGCTCCTCCGCTCCCTCAAAGAACACTATCTCGAGATCTCCAGAATGACGCCTCCTCCTAAAGTGAGCCCTCCGTCTTCCTTTTCTATCATTAAAGGCGCACTAGACGGCAATGGGCCGGTGCTTACTAGGAGCTACGGCAATGAAGAGATTAACGTTTCGGTTATGCGATTGGCTAATATTGTTCCCGGAGGCGGTGGAGACGATGGAGACGACGAAATTAACCAGTTGTTTCTTCATCTGACTGTATCAAAGCCGGAGCAGAGGGAAAGTTTACATTTTCTTTGTGGATTGTATCCCGATGCATTAGGTATTCATTCCGTTTCGATGAGACCAAAAGCTGAGTCCTCGGGGTTTCTCGTTGTTCCGTCCGGCTATAATGGTCCCGTGTTCGAAGATCTGGATGAGAAAATGCGAGATGTACTTCACAATTACATAGAGGAGCGAGGTATAAACGAGTCTCTCTTTCCATTTCTTCAGGCATGGCTTTATGTGAAAGAGCATCGAAATCTTATGCGGTGGTTCAGATCCGTTGGCTCGTTCATCAACGAGCCCAAGAACGCTAAAGTGGATTGATAGTTCATGTATTGGATAGGAAAATATGTGGAATTCAGGGTTCCATCTTCATAATTGGTTAGTTGTATAAGGTAAATGGTCTTATTTCATTTTAAGATACAATTTTGCAAGCCCCTATGTGGTGATTCAGTCTCTCCTTGTTAGCCATGGTTTTTGTTTTCCAAAGTTGATTAACAGTGCTATATATTGCAGCTTTATTCTTATGGATTTTCTTCTTATACCTTAGAAAGTTGTAGTTAAATTTTGTTATCTACACTCAAATGGATGCATTTCTCGAGTACCGACCCTCGTTCAAATT

Coding sequence (CDS)

ATGTTGAAGAAAGTGACGGCCGTCGCTGCGGTGGCTTTACGGGGTAGCCGCCGGCCGTCTCTCATGGCCACTTGCCGCCGTTCGACCTCCGTGTCTACTGCCGTCAATTCATTGCTCCTCCGCTCCCTCAAAGAACACTATCTCGAGATCTCCAGAATGACGCCTCCTCCTAAAGTGAGCCCTCCGTCTTCCTTTTCTATCATTAAAGGCGCACTAGACGGCAATGGGCCGGTGCTTACTAGGAGCTACGGCAATGAAGAGATTAACGTTTCGGTTATGCGATTGGCTAATATTGTTCCCGGAGGCGGTGGAGACGATGGAGACGACGAAATTAACCAGTTGTTTCTTCATCTGACTGTATCAAAGCCGGAGCAGAGGGAAAGTTTACATTTTCTTTGTGGATTGTATCCCGATGCATTAGGTATTCATTCCGTTTCGATGAGACCAAAAGCTGAGTCCTCGGGGTTTCTCGTTGTTCCGTCCGGCTATAATGGTCCCGTGTTCGAAGATCTGGATGAGAAAATGCGAGATGTACTTCACAATTACATAGAGGAGCGAGGTATAAACGAGTCTCTCTTTCCATTTCTTCAGGCATGGCTTTATGTGAAAGAGCATCGAAATCTTATGCGGTGGTTCAGATCCGTTGGCTCGTTCATCAACGAGCCCAAGAACGCTAAAGTGGATTGA

Protein sequence

MLKKVTAVAAVALRGSRRPSLMATCRRSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVSPPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTVSKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFEDLDEKMRDVLHNYIEERGINESLFPFLQAWLYVKEHRNLMRWFRSVGSFINEPKNAKVD
BLAST of Cp4.1LG13g10800 vs. Swiss-Prot
Match: YB95_ARATH (Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana GN=At2g39795 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-12
Identity = 63/232 (27.16%), Postives = 109/232 (46.98%), Query Frame = 1

Query: 4   KVTAVAAVALRGS--RRPS-LMATCRRSTSVSTAVNSL-----LLRSLKEHY---LEISR 63
           +V +++AVA R S  R PS +     R+ + STA++ +     L+R +       L+   
Sbjct: 22  RVRSISAVANRASLARNPSSIRPFVSRALNYSTAIDRISSEQTLIRVIDSEINSALQSDN 81

Query: 64  MTPPPKVSPPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDE-- 123
           +    +++P S    I+         LTR Y  E I V V   + +      DD DDE  
Sbjct: 82  IDSDEEMTPGSFPFRIEDKPGNQNVTLTRDYNGEHIKVVVSMPSLVSDENDDDDDDDEGP 141

Query: 124 INQLFLHLTVSKPEQRE-SLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFE 183
            N+  + L V+  ++   +L F C  +PD + I ++S++   +S   L       GP FE
Sbjct: 142 SNESSIPLVVTVTKKSGLTLEFSCMAFPDEIAIDALSVKHPGDS---LEDQLANEGPDFE 201

Query: 184 DLDEKMRDVLHNYIEERGINESLFPFLQAWLYVKEHRNLMRWFRSVGSFINE 222
           DLDE ++   + ++E RG+  S   FL  ++  K +R    W ++V  F+ +
Sbjct: 202 DLDENLKKTFYKFLEIRGVKASTTNFLHEYMTRKVNREYFLWLKNVKEFMEQ 250

BLAST of Cp4.1LG13g10800 vs. Swiss-Prot
Match: MAM33_YEAST (Mitochondrial acidic protein MAM33 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MAM33 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.8e-08
Identity = 47/206 (22.82%), Postives = 86/206 (41.75%), Query Frame = 1

Query: 48  LEISRMTPPPKVSPPS--------SFSIIKGALDGNGPVLTRSYGNEEINV--SVMRLAN 107
           L+I + T P   S  S         FS+++        ++ R+   E ++V   V ++AN
Sbjct: 61  LKIEKETLPESTSLDSFNDFLNKYKFSLVETPGKNEAEIVRRTESGETVHVFFDVAQIAN 120

Query: 108 IV------------PGGGGDDGDDEINQLFLHLTV-----SKPEQRESLHFLCGLYPDAL 167
           +               G  +D  D ++  F ++ V     S  E   S   L  L   + 
Sbjct: 121 LPYNNAMDENTEQNEDGINEDDFDALSDNFANVNVVISKESASEPAVSFELLMNLQEGSF 180

Query: 168 GIHSVSMRPKAESS------GFLVVPSGYNGPVFEDLDEKMRDVLHNYIEERGINESLFP 221
            + S +  P  +++        +     Y+GP F +LDE++++ L  Y+E RG+NE L  
Sbjct: 181 YVDSATPYPSVDAALNQSAEAEITRELVYHGPPFSNLDEELQESLEAYLESRGVNEELAS 240

BLAST of Cp4.1LG13g10800 vs. Swiss-Prot
Match: MAM33_SCHPO (Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC776.07 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06
Identity = 23/57 (40.35%), Postives = 38/57 (66.67%), Query Frame = 1

Query: 163 YNGPVFEDLDEKMRDVLHNYIEERGINESLFPFLQAWLYVKEHRNLMRWFRSVGSFI 220
           Y GP F++LD +++D+ H+Y+EER I+ESL  F+ ++   KE +  + W  SV  F+
Sbjct: 212 YLGPSFKELDPELQDLFHSYLEERKIDESLSSFIVSFGLTKELKEYINWLESVRQFL 268

BLAST of Cp4.1LG13g10800 vs. TrEMBL
Match: A0A0A0KCG3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G046350 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 4.3e-104
Identity = 190/230 (82.61%), Postives = 205/230 (89.13%), Query Frame = 1

Query: 1   MLKKVTAVAAVALRGSRRPSLMATCRRSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKK+ A +AVALR   RPSLM TCR STS S+AVNS LLRSLKEHYLEI+RM  PPKVS
Sbjct: 1   MLKKMMAASAVALRSGTRPSLMFTCRHSTSASSAVNSFLLRSLKEHYLEITRMAAPPKVS 60

Query: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120
           PPSSFSII GALDGNGPVLT++YG EEIN+SVMRLANIV GGGG D DDEINQLFLH+TV
Sbjct: 61  PPSSFSIIVGALDGNGPVLTKNYGKEEINISVMRLANIVRGGGGGDDDDEINQLFLHVTV 120

Query: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAES--SGFLVVPSGYNGPVFEDLDEKMRDV 180
           SK EQ+++LHFLCGLYPDALGIHSVSMRPKAES  SGFLVVPS YNGP FEDLDEKMRD+
Sbjct: 121 SKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFEDLDEKMRDM 180

Query: 181 LHNYIEERGINESLFPFLQAWLYVKEHRNLMRWFRSVGSFINEPKNAKVD 229
            HNYIEERG+NESLFPFLQAWLYVKEHRNL+RWFRSVG+FI EPKN K D
Sbjct: 181 FHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPKNGKKD 230

BLAST of Cp4.1LG13g10800 vs. TrEMBL
Match: A0A0V0HIJ0_SOLCH (Putative mitochondrial acidic protein MAM33-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.7e-89
Identity = 157/223 (70.40%), Postives = 191/223 (85.65%), Query Frame = 1

Query: 1   MLKKVTAVAAVALRGSRRPSLMATCRRSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           ML+K  A A  AL+   +P     CRRS+ VS+AVNS++LRSLK+HYLE+S+MTPPPKVS
Sbjct: 1   MLRKALAFAGSALQQQHQPWRTIACRRSSGVSSAVNSIILRSLKDHYLEVSKMTPPPKVS 60

Query: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120
           PPS F+++KGALD  GPVL R++GNEEI++SVMRLANI+ GG GD+ +D INQLFLH+ +
Sbjct: 61  PPSPFTVVKGALDHGGPVLRRTHGNEEISISVMRLANIIAGGIGDEEEDGINQLFLHVDI 120

Query: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFEDLDEKMRDVLH 180
           SKP Q+ESLHFLCGLYPDALGIHSVS+R K ESSGFL VP+ Y GPVF+D+DEKMRD LH
Sbjct: 121 SKPGQKESLHFLCGLYPDALGIHSVSLRSKTESSGFLAVPTNYGGPVFQDIDEKMRDALH 180

Query: 181 NYIEERGINESLFPFLQAWLYVKEHRNLMRWFRSVGSFINEPK 224
           ++IEERGINESLFPFLQAWLYVK+HRNLMRWF++VGS +N+ K
Sbjct: 181 SFIEERGINESLFPFLQAWLYVKDHRNLMRWFKTVGSLVNDRK 223

BLAST of Cp4.1LG13g10800 vs. TrEMBL
Match: M0ZKB7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400000991 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.7e-89
Identity = 157/223 (70.40%), Postives = 191/223 (85.65%), Query Frame = 1

Query: 1   MLKKVTAVAAVALRGSRRPSLMATCRRSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           ML+K  A A  AL+   +P     CRRS+ VS+AVNS++LRSLK+HYLE+S+MTPPPKVS
Sbjct: 1   MLRKALAFAGSALQQQHQPWRTIACRRSSGVSSAVNSIILRSLKDHYLEVSKMTPPPKVS 60

Query: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120
           PPS F+++KGALD  GPVL R++GNEEI++SVMRLANI+ GG GD+ +D INQLFLH+ +
Sbjct: 61  PPSPFTVVKGALDHGGPVLRRTHGNEEISISVMRLANIIAGGIGDEEEDGINQLFLHVDI 120

Query: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFEDLDEKMRDVLH 180
           SKP Q+ESLHFLCGLYPDALGIHSVS+R K ESSGFL VP+ Y GPVF+D+DEKMRD LH
Sbjct: 121 SKPGQKESLHFLCGLYPDALGIHSVSLRSKTESSGFLAVPTNYGGPVFQDIDEKMRDALH 180

Query: 181 NYIEERGINESLFPFLQAWLYVKEHRNLMRWFRSVGSFINEPK 224
           ++IEERGINESLFPFLQAWLYVK+HRNLMRWF++VGS +N+ K
Sbjct: 181 SFIEERGINESLFPFLQAWLYVKDHRNLMRWFKTVGSLVNDRK 223

BLAST of Cp4.1LG13g10800 vs. TrEMBL
Match: K4D4Q3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 8.7e-89
Identity = 155/223 (69.51%), Postives = 191/223 (85.65%), Query Frame = 1

Query: 1   MLKKVTAVAAVALRGSRRPSLMATCRRSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           ML+K  A+A  AL+   +P     CRRS+ VS+AVNS++LRSLK+HYLE+S+MTPPPKVS
Sbjct: 1   MLRKALALAGSALQQQHQPWRTIACRRSSGVSSAVNSIILRSLKDHYLEVSKMTPPPKVS 60

Query: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120
           PPS F+++KGALD  GPVL R++GNEEI++SVMRLANI+ GG  D+ +D INQLFLH+ +
Sbjct: 61  PPSPFTVLKGALDHGGPVLRRTHGNEEISISVMRLANIIAGGIADEEEDGINQLFLHVDI 120

Query: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFEDLDEKMRDVLH 180
           SKP Q+ESLHFLCGLYPDALGIHSVS+R K ESSGFL VP+ Y GPVF+D+DEKMRD LH
Sbjct: 121 SKPGQKESLHFLCGLYPDALGIHSVSLRSKTESSGFLAVPTNYGGPVFQDIDEKMRDALH 180

Query: 181 NYIEERGINESLFPFLQAWLYVKEHRNLMRWFRSVGSFINEPK 224
           ++IEERGINESLFPFLQAWLYVK+HRNLMRWF+++GS +N+ K
Sbjct: 181 SFIEERGINESLFPFLQAWLYVKDHRNLMRWFKTIGSLVNDRK 223

BLAST of Cp4.1LG13g10800 vs. TrEMBL
Match: A0A059BGD0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02665 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 4.3e-88
Identity = 152/200 (76.00%), Postives = 185/200 (92.50%), Query Frame = 1

Query: 30  SVSTAVNSLLLRSLKEHYLEISRMTPPPKVSPPSSFSIIKGALDGNGPVLTRSYGNEEIN 89
           +V++AVNS+LLRSLKEHYLE+S+MTPPPKV+PPS F+I+KGALD +GPVL R+Y +EEI+
Sbjct: 35  TVASAVNSILLRSLKEHYLEVSKMTPPPKVNPPSPFTIVKGALDADGPVLRRTYNDEEIS 94

Query: 90  VSVMRLANIVPGGGG-DDGDDEINQLFLHLTVSKPEQRESLHFLCGLYPDALGIHSVSMR 149
           + VMRLAN+VPGGG  DDG+D+INQLFLH++++KP Q E+LHFLCGLYPDALGIHSVSMR
Sbjct: 95  LYVMRLANLVPGGGREDDGEDDINQLFLHVSIAKPGQEEALHFLCGLYPDALGIHSVSMR 154

Query: 150 PKAESSGFLVVPSGYNGPVFEDLDEKMRDVLHNYIEERGINESLFPFLQAWLYVKEHRNL 209
           PK E++GFLVVP  YNGP+FEDLDEK+RDVLH+YIEERG+NESLFPFLQAWLYVK+HR L
Sbjct: 155 PKLETTGFLVVPKKYNGPIFEDLDEKVRDVLHSYIEERGVNESLFPFLQAWLYVKDHRGL 214

Query: 210 MRWFRSVGSFINEPKNAKVD 229
           MRWF+SVG+FIN+ K+AK D
Sbjct: 215 MRWFKSVGTFINKDKSAKDD 234

BLAST of Cp4.1LG13g10800 vs. TAIR10
Match: AT4G32605.1 (AT4G32605.1 Mitochondrial glycoprotein family protein)

HSP 1 Score: 283.9 bits (725), Expect = 8.9e-77
Identity = 136/201 (67.66%), Postives = 167/201 (83.08%), Query Frame = 1

Query: 27  RSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVSPPSSFSIIKGALDGN-GPVLTRSYGN 86
           +S +VS AV+S+LLRSLKEHYLE+S+MTPPPKVSPPS F I+KG+L+G+ G VL +S GN
Sbjct: 28  KSANVSAAVDSMLLRSLKEHYLEVSKMTPPPKVSPPSPFEIVKGSLEGSTGAVLKKSVGN 87

Query: 87  EEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTVSKPEQRESLHFLCGLYPDALGIHSV 146
           EEIN+ VMRLA+    GG ++ D  INQLFLH+ VSKP Q +SLHFLCGLYPDALGIHSV
Sbjct: 88  EEINLFVMRLAH----GGDEEDDGGINQLFLHVAVSKPNQPDSLHFLCGLYPDALGIHSV 147

Query: 147 SMRPKAESSGFLVVPSGYNGPVFEDLDEKMRDVLHNYIEERGINESLFPFLQAWLYVKEH 206
           SMRPK E+      P+ Y GP FE+LDEKMRDV H ++EERG+NESLFPFLQAWLYVK+H
Sbjct: 148 SMRPKLEALEMSDDPTQYTGPSFEELDEKMRDVFHGFLEERGVNESLFPFLQAWLYVKDH 207

Query: 207 RNLMRWFRSVGSFINEPKNAK 227
           RNL+RWF+SVG+F++E  +A+
Sbjct: 208 RNLLRWFKSVGTFVHENPSAE 224

BLAST of Cp4.1LG13g10800 vs. TAIR10
Match: AT1G80720.1 (AT1G80720.1 Mitochondrial glycoprotein family protein)

HSP 1 Score: 85.9 bits (211), Expect = 3.5e-17
Identity = 56/190 (29.47%), Postives = 94/190 (49.47%), Query Frame = 1

Query: 39  LLRSLKEHYLEISRMTPPPKVSPPSSFS--IIKGALDGNGPVLTRSYGN-EEINVSVMRL 98
           L+R+  E+ L+ S     P + PP+SF    +          L R++G+ E+I +     
Sbjct: 13  LIRNEIEYELDHS-----PPLQPPNSFGPFTVDERPGEQWISLKRNFGDKEDIKIEATMF 72

Query: 99  ANIVPGGGGDDGDDEINQLFLHLT----VSKPEQRESLHFLCGLYPDALGIHSVSMRPKA 158
              VP       + E     LH+T    +SK    E+L  +C  +PD + I  + +R   
Sbjct: 73  DRSVPTSKSTKTEPEY---ILHITFIVNISKAGATEALEIMCSAWPDTIEISKLCIRRGI 132

Query: 159 ESSGFLVVPSGYNGPVFEDLDEKMRDVLHNYIEERGINESLFPFLQAWLYVKEHRNLMRW 218
            +S     PS Y GP FE+LD++++D L+ ++EERGI++ L  FL  ++  K     +RW
Sbjct: 133 NTS-----PSSYGGPEFEELDDQLQDALYQFLEERGISDELAVFLHRYMKNKGKAEYVRW 189

Query: 219 FRSVGSFINE 222
             SV S++ +
Sbjct: 193 MESVKSYVEQ 189

BLAST of Cp4.1LG13g10800 vs. TAIR10
Match: AT1G15870.1 (AT1G15870.1 Mitochondrial glycoprotein family protein)

HSP 1 Score: 78.6 bits (192), Expect = 5.7e-15
Identity = 39/145 (26.90%), Postives = 76/145 (52.41%), Query Frame = 1

Query: 79  LTRSYGN-EEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTVSKPE-QRESLHFLCGLY 138
           L R +G  E+I +        VP       D E  QL +   V+  +   E+L  +C  +
Sbjct: 102 LRRKFGEKEDIKIEATMFDGSVPSSKSTTSDPEDVQLHITFIVNISKGDGETLEIMCSAW 161

Query: 139 PDALGIHSVSMRPKAESSGFLVVPSGYNGPVFEDLDEKMRDVLHNYIEERGINESLFPFL 198
           PD + I    +R  +++S     P+ Y GP F++++++++D ++ ++EERGI++ L  FL
Sbjct: 162 PDTIQITKFFVRKSSQNS-----PNAYIGPEFQEMEDELQDSVYRFLEERGISDDLAEFL 221

Query: 199 QAWLYVKEHRNLMRWFRSVGSFINE 222
             ++  K+    +RW  +V S++ +
Sbjct: 222 HQYMKNKDKAEYIRWMETVKSYVEQ 241

BLAST of Cp4.1LG13g10800 vs. TAIR10
Match: AT3G55605.1 (AT3G55605.1 Mitochondrial glycoprotein family protein)

HSP 1 Score: 78.2 bits (191), Expect = 7.4e-15
Identity = 48/158 (30.38%), Postives = 78/158 (49.37%), Query Frame = 1

Query: 79  LTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQ---------------LFLHLTVSKP 138
           LTR Y  E+I V V      +PG   D+ +D+++                + L +TV+K 
Sbjct: 110 LTREYNGEQIKVEVS-----MPGLAMDENEDDVDDDEDGDGRHEKSNESSIPLVVTVTK- 169

Query: 139 EQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFEDLDEKMRDVLHNYI 198
           +   SL F C  +PD + I  +S+    +SS   +    Y+GP F++LDE MR   H ++
Sbjct: 170 KSGLSLEFSCTAFPDEIVIDGLSVNRPDDSSEEQLT---YDGPDFQELDENMRKSFHKFL 229

Query: 199 EERGINESLFPFLQAWLYVKEHRNLMRWFRSVGSFINE 222
           E RGI  S   FL  ++  K+ R  + W + + +F+ E
Sbjct: 230 ETRGIKASATDFLYEYMMKKDSREYLLWLKKLKTFVQE 258

BLAST of Cp4.1LG13g10800 vs. TAIR10
Match: AT5G05990.1 (AT5G05990.1 Mitochondrial glycoprotein family protein)

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-14
Identity = 53/160 (33.12%), Postives = 75/160 (46.88%), Query Frame = 1

Query: 79  LTRSYGNEEINVSVMRLANIVPGGGGDDGDDEI------------------NQLFLHLTV 138
           LTR Y  E + V V  + N+V G   DD DDE                   + + L +T+
Sbjct: 104 LTREYEGETVKVEV-HMTNLVTGDKEDDEDDEEEAENEEDEDEDKPLKPKQSNVPLLVTL 163

Query: 139 SKPEQRESLHFLCGLYPDALGIHSVSMR-PKAESSGFLVVPSGYNGPVFEDLDEKMRDVL 198
           SK +   SL F C  +PD + I  + +  P   S   L     Y GP F  LDEK+R   
Sbjct: 164 SK-KTGPSLEFRCTAFPDRIAIKDMWVTFPDDPSKDELA----YEGPSFRVLDEKLRKAF 223

Query: 199 HNYIEERGINESLFPFLQAWLYVKEHRNLMRWFRSVGSFI 220
           H YIE RGI  S+  FL  ++  K+ R  + W +S+ +F+
Sbjct: 224 HRYIEIRGIKPSMINFLHEYMINKDSREHLLWLKSLKNFV 257

BLAST of Cp4.1LG13g10800 vs. NCBI nr
Match: gi|449446313|ref|XP_004140916.1| (PREDICTED: uncharacterized protein At2g39795, mitochondrial [Cucumis sativus])

HSP 1 Score: 385.6 bits (989), Expect = 6.1e-104
Identity = 190/230 (82.61%), Postives = 205/230 (89.13%), Query Frame = 1

Query: 1   MLKKVTAVAAVALRGSRRPSLMATCRRSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKK+ A +AVALR   RPSLM TCR STS S+AVNS LLRSLKEHYLEI+RM  PPKVS
Sbjct: 1   MLKKMMAASAVALRSGTRPSLMFTCRHSTSASSAVNSFLLRSLKEHYLEITRMAAPPKVS 60

Query: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120
           PPSSFSII GALDGNGPVLT++YG EEIN+SVMRLANIV GGGG D DDEINQLFLH+TV
Sbjct: 61  PPSSFSIIVGALDGNGPVLTKNYGKEEINISVMRLANIVRGGGGGDDDDEINQLFLHVTV 120

Query: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAES--SGFLVVPSGYNGPVFEDLDEKMRDV 180
           SK EQ+++LHFLCGLYPDALGIHSVSMRPKAES  SGFLVVPS YNGP FEDLDEKMRD+
Sbjct: 121 SKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFEDLDEKMRDM 180

Query: 181 LHNYIEERGINESLFPFLQAWLYVKEHRNLMRWFRSVGSFINEPKNAKVD 229
            HNYIEERG+NESLFPFLQAWLYVKEHRNL+RWFRSVG+FI EPKN K D
Sbjct: 181 FHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPKNGKKD 230

BLAST of Cp4.1LG13g10800 vs. NCBI nr
Match: gi|659113531|ref|XP_008456624.1| (PREDICTED: uncharacterized protein At2g39795, mitochondrial [Cucumis melo])

HSP 1 Score: 378.6 bits (971), Expect = 7.5e-102
Identity = 182/230 (79.13%), Postives = 204/230 (88.70%), Query Frame = 1

Query: 1   MLKKVTAVAAVALRGSRRPSLMATCRRSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           ML K+ A  AVALR   RPSLM TCR STS S+AVNS LLRSLKEHYLEI+RM  PPKVS
Sbjct: 1   MLNKLMAATAVALRSGSRPSLMVTCRHSTSASSAVNSFLLRSLKEHYLEITRMPAPPKVS 60

Query: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120
           PPSSFSII GALDG+GPVLT++YG EE+N+SVMRL+NIV GGGGD+ DD+INQLFLH++V
Sbjct: 61  PPSSFSIITGALDGHGPVLTKNYGKEEVNISVMRLSNIVRGGGGDNDDDDINQLFLHVSV 120

Query: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAES--SGFLVVPSGYNGPVFEDLDEKMRDV 180
           SKPEQ+++LHFLCGLYPDALGIHSVSMRPK ES  SGFL+VPS YNGP FEDLDEKMRD+
Sbjct: 121 SKPEQKDTLHFLCGLYPDALGIHSVSMRPKGESSGSGFLLVPSSYNGPTFEDLDEKMRDM 180

Query: 181 LHNYIEERGINESLFPFLQAWLYVKEHRNLMRWFRSVGSFINEPKNAKVD 229
            HNYI+ERG+NESLFPFLQAWLYVKEHRNL+RWFRSVG+FI EPKN K D
Sbjct: 181 FHNYIDERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPKNGKKD 230

BLAST of Cp4.1LG13g10800 vs. NCBI nr
Match: gi|971556717|ref|XP_015165743.1| (PREDICTED: mitochondrial acidic protein MAM33 isoform X1 [Solanum tuberosum])

HSP 1 Score: 337.0 bits (863), Expect = 2.5e-89
Identity = 157/223 (70.40%), Postives = 191/223 (85.65%), Query Frame = 1

Query: 1   MLKKVTAVAAVALRGSRRPSLMATCRRSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           ML+K  A A  AL+   +P     CRRS+ VS+AVNS++LRSLK+HYLE+S+MTPPPKVS
Sbjct: 1   MLRKALAFAGSALQQQHQPWRTIACRRSSGVSSAVNSIILRSLKDHYLEVSKMTPPPKVS 60

Query: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120
           PPS F+++KGALD  GPVL R++GNEEI++SVMRLANI+ GG GD+ +D INQLFLH+ +
Sbjct: 61  PPSPFTVVKGALDHGGPVLRRTHGNEEISISVMRLANIIAGGIGDEEEDGINQLFLHVDI 120

Query: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFEDLDEKMRDVLH 180
           SKP Q+ESLHFLCGLYPDALGIHSVS+R K ESSGFL VP+ Y GPVF+D+DEKMRD LH
Sbjct: 121 SKPGQKESLHFLCGLYPDALGIHSVSLRSKTESSGFLAVPTNYGGPVFQDIDEKMRDALH 180

Query: 181 NYIEERGINESLFPFLQAWLYVKEHRNLMRWFRSVGSFINEPK 224
           ++IEERGINESLFPFLQAWLYVK+HRNLMRWF++VGS +N+ K
Sbjct: 181 SFIEERGINESLFPFLQAWLYVKDHRNLMRWFKTVGSLVNDRK 223

BLAST of Cp4.1LG13g10800 vs. NCBI nr
Match: gi|698521605|ref|XP_009757609.1| (PREDICTED: mitochondrial acidic protein MAM33 isoform X1 [Nicotiana sylvestris])

HSP 1 Score: 336.3 bits (861), Expect = 4.3e-89
Identity = 157/223 (70.40%), Postives = 194/223 (87.00%), Query Frame = 1

Query: 1   MLKKVTAVAAVALRGSRRPSLMATCRRSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           ML+K    A  AL+  ++P      RRS+SVS+AVNS++LRSLK+HYLE+S+MTPPPKVS
Sbjct: 1   MLRKALTCAGSALQ-QQQPWRTIAWRRSSSVSSAVNSIILRSLKDHYLEVSKMTPPPKVS 60

Query: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120
           PP+ F+++KGALD  GPVL R++GNEEI++SVMRLANI+PGGGGD+ +D INQLFLH+ +
Sbjct: 61  PPTPFTVVKGALDQGGPVLRRTHGNEEISISVMRLANIIPGGGGDEEEDGINQLFLHVDI 120

Query: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFEDLDEKMRDVLH 180
           SKP Q+ESLHFLCGLYPDALGIHSVS+RPKAES+GFL VP+ Y+GPVF+D+DE MRD LH
Sbjct: 121 SKPGQKESLHFLCGLYPDALGIHSVSLRPKAESTGFLAVPTNYSGPVFQDIDEAMRDALH 180

Query: 181 NYIEERGINESLFPFLQAWLYVKEHRNLMRWFRSVGSFINEPK 224
            +IEERGINESLFPFLQAWLYVK+HRNLMRWF++VGS +N+ K
Sbjct: 181 RFIEERGINESLFPFLQAWLYVKDHRNLMRWFKTVGSLVNDSK 222

BLAST of Cp4.1LG13g10800 vs. NCBI nr
Match: gi|460409009|ref|XP_004249933.1| (PREDICTED: mitochondrial acidic protein MAM33 [Solanum lycopersicum])

HSP 1 Score: 334.7 bits (857), Expect = 1.2e-88
Identity = 155/223 (69.51%), Postives = 191/223 (85.65%), Query Frame = 1

Query: 1   MLKKVTAVAAVALRGSRRPSLMATCRRSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           ML+K  A+A  AL+   +P     CRRS+ VS+AVNS++LRSLK+HYLE+S+MTPPPKVS
Sbjct: 1   MLRKALALAGSALQQQHQPWRTIACRRSSGVSSAVNSIILRSLKDHYLEVSKMTPPPKVS 60

Query: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120
           PPS F+++KGALD  GPVL R++GNEEI++SVMRLANI+ GG  D+ +D INQLFLH+ +
Sbjct: 61  PPSPFTVLKGALDHGGPVLRRTHGNEEISISVMRLANIIAGGIADEEEDGINQLFLHVDI 120

Query: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFEDLDEKMRDVLH 180
           SKP Q+ESLHFLCGLYPDALGIHSVS+R K ESSGFL VP+ Y GPVF+D+DEKMRD LH
Sbjct: 121 SKPGQKESLHFLCGLYPDALGIHSVSLRSKTESSGFLAVPTNYGGPVFQDIDEKMRDALH 180

Query: 181 NYIEERGINESLFPFLQAWLYVKEHRNLMRWFRSVGSFINEPK 224
           ++IEERGINESLFPFLQAWLYVK+HRNLMRWF+++GS +N+ K
Sbjct: 181 SFIEERGINESLFPFLQAWLYVKDHRNLMRWFKTIGSLVNDRK 223

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
YB95_ARATH1.1e-1227.16Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana GN=At2g... [more]
MAM33_YEAST4.8e-0822.82Mitochondrial acidic protein MAM33 OS=Saccharomyces cerevisiae (strain ATCC 2045... [more]
MAM33_SCHPO1.6e-0640.35Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / AT... [more]
Match NameE-valueIdentityDescription
A0A0A0KCG3_CUCSA4.3e-10482.61Uncharacterized protein OS=Cucumis sativus GN=Csa_6G046350 PE=4 SV=1[more]
A0A0V0HIJ0_SOLCH1.7e-8970.40Putative mitochondrial acidic protein MAM33-like OS=Solanum chacoense PE=4 SV=1[more]
M0ZKB7_SOLTU1.7e-8970.40Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400000991 PE=4 SV=1[more]
K4D4Q3_SOLLC8.7e-8969.51Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
A0A059BGD0_EUCGR4.3e-8876.00Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02665 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G32605.18.9e-7767.66 Mitochondrial glycoprotein family protein[more]
AT1G80720.13.5e-1729.47 Mitochondrial glycoprotein family protein[more]
AT1G15870.15.7e-1526.90 Mitochondrial glycoprotein family protein[more]
AT3G55605.17.4e-1530.38 Mitochondrial glycoprotein family protein[more]
AT5G05990.11.3e-1433.13 Mitochondrial glycoprotein family protein[more]
Match NameE-valueIdentityDescription
gi|449446313|ref|XP_004140916.1|6.1e-10482.61PREDICTED: uncharacterized protein At2g39795, mitochondrial [Cucumis sativus][more]
gi|659113531|ref|XP_008456624.1|7.5e-10279.13PREDICTED: uncharacterized protein At2g39795, mitochondrial [Cucumis melo][more]
gi|971556717|ref|XP_015165743.1|2.5e-8970.40PREDICTED: mitochondrial acidic protein MAM33 isoform X1 [Solanum tuberosum][more]
gi|698521605|ref|XP_009757609.1|4.3e-8970.40PREDICTED: mitochondrial acidic protein MAM33 isoform X1 [Nicotiana sylvestris][more]
gi|460409009|ref|XP_004249933.1|1.2e-8869.51PREDICTED: mitochondrial acidic protein MAM33 [Solanum lycopersicum][more]
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005759mitochondrial matrix
Vocabulary: INTERPRO
TermDefinition
IPR003428MAM33
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005759 mitochondrial matrix
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG13g10800.1Cp4.1LG13g10800.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003428Mitochondrial glycoproteinGENE3DG3DSA:3.10.280.10coord: 48..220
score: 8.0
IPR003428Mitochondrial glycoproteinPFAMPF02330MAM33coord: 78..219
score: 4.4
IPR003428Mitochondrial glycoproteinunknownSSF54529Mitochondrial glycoprotein MAM33-likecoord: 41..220
score: 5.75
NoneNo IPR availablePANTHERPTHR31365FAMILY NOT NAMEDcoord: 10..226
score: 2.2E
NoneNo IPR availablePANTHERPTHR31365:SF2SUBFAMILY NOT NAMEDcoord: 10..226
score: 2.2E