Cp4.1LG13g08460 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCCTAAAATCTCAACCGTCAATTTGAAACGTACATCGTCCGTTGGATCTAGGGCTTCAAAAGTTTAAAACTTTACACTATATAAACAACTCCCTCTCCTGGATTTCTGCCGCTACTGCCTCGATTTTTCTTATAGACGCGTAGACACCCGAAATCAAGGGTAATTGAAGATGGTTCAGCGACTTACTTACCGTAAGCGCCACAGCTACGCCACCAAATCCAATCAGCACCGCGTTGTCAAGACTCCCGGTACCTTTTTTTGGTCCTGAATCAGTGTAATTCCTGCTCTTATGAGCCGTTTTTTCCCTTCAATTTCGTGACCATTTTGGGTGTTGTGCTGATGCGTTTTAGGTGGAAAGTTGATCTATCAAACCACCAAGAAGAGGGCCAGCGGTCCCAAATGTCCCGTTACCGGGAAGAGAATCCAAGGGGTATGTGATTTTATGCCTTCGATTCAAAGTTTTTCAGTTTTTGGGGTGTTTATAATTGCATTTGGGGATAGTCATTCTTCCTGAAACTGACATTGCGTCGCCCTGATAGCTAACTCTCAGTCTCTAGAACATATAATGGTGGCAATCAATTGTCATAGCTGAAAGAAAATGTAATTGTATTGTATTTTAGTTGTAATGTTTTGTTTGAACAGATTCCGCACTTGAGGCCTGCTGAATACAAGAGGTCTAGACTGGCTAGGAACCGAAGAACCATAAACCGGGCATATGGTGGAGTGTTGTCAGGAAGTGCTGTCAGAGAGAGGTATGTGCTTCATTGAATCAGCCCTGTTGTTTTTGGTTTCCTTTGGGTTTTCTACCAAATTTAAGGAGTAATTCAACAATGGTTGCAGGATCATGCGGGCTTTTCTGGTAGAAGAGCAGAAGATTGTGAAAAAGGTATTGAAAATCCAAAAGGCAAAGGAAAAGTTAGCTGCCAAGAGTTCAAAATGAGTATTTTTTGCTTGAATTTGCGAATTTTAGTGTTGATAGTGATTAGATGTTTCTGGGTTCTTCCTTAAATGGGTCATTGTTGACAAATCAATCCCCCAAGTGTCCTGTTTTATGATATCACCGTAACCTACTATGTCACAATTTCAGACCCTTTCTAGAGATTTTTGTATCATTACATTGCTGAATCTAATACCATCTTGCTTGCTCAATCTTATACCATCTTGATCGATCGATGAATGCGGATTTCAGGAAACAATGTTCTTGGGATGTTCTTCAGTATG CCCCTAAAATCTCAACCGTCAATTTGAAACGTACATCGTCCGTTGGATCTAGGGCTTCAAAAGTTTAAAACTTTACACTATATAAACAACTCCCTCTCCTGGATTTCTGCCGCTACTGCCTCGATTTTTCTTATAGACGCGTAGACACCCGAAATCAAGGGTAATTGAAGATGGTTCAGCGACTTACTTACCGTAAGCGCCACAGCTACGCCACCAAATCCAATCAGCACCGCGTTGTCAAGACTCCCGGTGGAAAGTTGATCTATCAAACCACCAAGAAGAGGGCCAGCGGTCCCAAATGTCCCGTTACCGGGAAGAGAATCCAAGGGATTCCGCACTTGAGGCCTGCTGAATACAAGAGGTCTAGACTGGCTAGGAACCGAAGAACCATAAACCGGGCATATGGTGGAGTGTTGTCAGGAAGTGCTGTCAGAGAGAGGATCATGCGGGCTTTTCTGGTAGAAGAGCAGAAGATTGTGAAAAAGGTATTGAAAATCCAAAAGGCAAAGGAAAAGTTAGCTGCCAAGAGTTCAAAATGAGTATTTTTTGCTTGAATTTGCGAATTTTAGTGTTGATAGTGATTAGATGTTTCTGGGTTCTTCCTTAAATGGGTCATTGTTGACAAATCAATCCCCCAAGTGTCCTGTTTTATGATATCACCGTAACCTACTATGTCACAATTTCAGACCCTTTCTAGAGATTTTTGTATCATTACATTGCTGAATCTAATACCATCTTGCTTGCTCAATCTTATACCATCTTGATCGATCGATGAATGCGGATTTCAGGAAACAATGTTCTTGGGATGTTCTTCAGTATG ATGGTTCAGCGACTTACTTACCGTAAGCGCCACAGCTACGCCACCAAATCCAATCAGCACCGCGTTGTCAAGACTCCCGGTGGAAAGTTGATCTATCAAACCACCAAGAAGAGGGCCAGCGGTCCCAAATGTCCCGTTACCGGGAAGAGAATCCAAGGGATTCCGCACTTGAGGCCTGCTGAATACAAGAGGTCTAGACTGGCTAGGAACCGAAGAACCATAAACCGGGCATATGGTGGAGTGTTGTCAGGAAGTGCTGTCAGAGAGAGGATCATGCGGGCTTTTCTGGTAGAAGAGCAGAAGATTGTGAAAAAGGTATTGAAAATCCAAAAGGCAAAGGAAAAGTTAGCTGCCAAGAGTTCAAAATGA MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTINRAYGGVLSGSAVRERIMRAFLVEEQKIVKKVLKIQKAKEKLAAKSSK
BLAST of Cp4.1LG13g08460 vs. Swiss-Prot
Match: RL34_TOBAC (60S ribosomal protein L34 OS=Nicotiana tabacum GN=RPL34 PE=2 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 6.7e-57 Identity = 115/120 (95.83%), Postives = 119/120 (99.17%), Query Frame = 1
BLAST of Cp4.1LG13g08460 vs. Swiss-Prot
Match: RL34_PEA (60S ribosomal protein L34 OS=Pisum sativum GN=RPL34 PE=2 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 6.3e-55 Identity = 110/120 (91.67%), Postives = 116/120 (96.67%), Query Frame = 1
BLAST of Cp4.1LG13g08460 vs. Swiss-Prot
Match: RL341_ARATH (60S ribosomal protein L34-1 OS=Arabidopsis thaliana GN=RPL34A PE=2 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 1.4e-54 Identity = 108/120 (90.00%), Postives = 117/120 (97.50%), Query Frame = 1
BLAST of Cp4.1LG13g08460 vs. Swiss-Prot
Match: RL342_ARATH (60S ribosomal protein L34-2 OS=Arabidopsis thaliana GN=RPL34B PE=3 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 6.9e-54 Identity = 108/119 (90.76%), Postives = 114/119 (95.80%), Query Frame = 1
BLAST of Cp4.1LG13g08460 vs. Swiss-Prot
Match: RL343_ARATH (60S ribosomal protein L34-3 OS=Arabidopsis thaliana GN=RPL34C PE=2 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 4.5e-53 Identity = 108/120 (90.00%), Postives = 112/120 (93.33%), Query Frame = 1
BLAST of Cp4.1LG13g08460 vs. TrEMBL
Match: A0A0A0LK03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G338890 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 1.2e-55 Identity = 116/120 (96.67%), Postives = 120/120 (100.00%), Query Frame = 1
BLAST of Cp4.1LG13g08460 vs. TrEMBL
Match: A0A068TVQ9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032233001 PE=4 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 1.5e-55 Identity = 116/120 (96.67%), Postives = 119/120 (99.17%), Query Frame = 1
BLAST of Cp4.1LG13g08460 vs. TrEMBL
Match: A0A0A0LP37_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G009690 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 2.6e-55 Identity = 115/120 (95.83%), Postives = 120/120 (100.00%), Query Frame = 1
BLAST of Cp4.1LG13g08460 vs. TrEMBL
Match: K4BBU9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 4.4e-55 Identity = 115/120 (95.83%), Postives = 119/120 (99.17%), Query Frame = 1
BLAST of Cp4.1LG13g08460 vs. TrEMBL
Match: K4BWT1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 4.4e-55 Identity = 115/120 (95.83%), Postives = 120/120 (100.00%), Query Frame = 1
BLAST of Cp4.1LG13g08460 vs. TAIR10
Match: AT1G26880.1 (AT1G26880.1 Ribosomal protein L34e superfamily protein) HSP 1 Score: 213.4 bits (542), Expect = 7.9e-56 Identity = 108/120 (90.00%), Postives = 117/120 (97.50%), Query Frame = 1
BLAST of Cp4.1LG13g08460 vs. TAIR10
Match: AT1G69620.1 (AT1G69620.1 ribosomal protein L34) HSP 1 Score: 211.1 bits (536), Expect = 3.9e-55 Identity = 108/119 (90.76%), Postives = 114/119 (95.80%), Query Frame = 1
BLAST of Cp4.1LG13g08460 vs. TAIR10
Match: AT3G28900.1 (AT3G28900.1 Ribosomal protein L34e superfamily protein) HSP 1 Score: 208.4 bits (529), Expect = 2.5e-54 Identity = 108/120 (90.00%), Postives = 112/120 (93.33%), Query Frame = 1
BLAST of Cp4.1LG13g08460 vs. NCBI nr
Match: gi|449459176|ref|XP_004147322.1| (PREDICTED: 60S ribosomal protein L34 [Cucumis sativus]) HSP 1 Score: 223.8 bits (569), Expect = 1.7e-55 Identity = 116/120 (96.67%), Postives = 120/120 (100.00%), Query Frame = 1
BLAST of Cp4.1LG13g08460 vs. NCBI nr
Match: gi|661895753|emb|CDP00331.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 223.4 bits (568), Expect = 2.2e-55 Identity = 116/120 (96.67%), Postives = 119/120 (99.17%), Query Frame = 1
BLAST of Cp4.1LG13g08460 vs. NCBI nr
Match: gi|778655948|ref|XP_004138165.2| (PREDICTED: 60S ribosomal protein L34-like [Cucumis sativus]) HSP 1 Score: 222.6 bits (566), Expect = 3.7e-55 Identity = 115/120 (95.83%), Postives = 120/120 (100.00%), Query Frame = 1
BLAST of Cp4.1LG13g08460 vs. NCBI nr
Match: gi|460372822|ref|XP_004232223.1| (PREDICTED: 60S ribosomal protein L34 [Solanum lycopersicum]) HSP 1 Score: 221.9 bits (564), Expect = 6.3e-55 Identity = 115/120 (95.83%), Postives = 119/120 (99.17%), Query Frame = 1
BLAST of Cp4.1LG13g08460 vs. NCBI nr
Match: gi|460386223|ref|XP_004238799.1| (PREDICTED: 60S ribosomal protein L34 [Solanum lycopersicum]) HSP 1 Score: 221.9 bits (564), Expect = 6.3e-55 Identity = 115/120 (95.83%), Postives = 120/120 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |