Cp4.1LG13g05570 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG13g05570
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Phytoene synthase
Location	Cp4.1LG13 : 5416613 .. 5421307 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGTTGATACTAAAAACAAAAAATGAAGTAACAATAGCTACAATTCCGACACTCTTATTTGTCTCAGCCCACAAGCGGAGCTGCAAGTTGCAGAAAATTCAACCCCCAGCACAGGGGAAAATATAAAAAAGAACTAGCCGAGCTCATGCAACCACACAGTTTGCGGATCAAATTCCGTGAGAGCCTCCATCCACCACCAAGCCCAAAAAGCGCACAGCCGCCTCGATTCAACTCACGTCCCCGCAACAAGAACACCCAATTCAATCACCCTTTTACACGATCAAACACCAAAGTGGAATCAAAACCCAGAAACAAATTCCAGAGCCCTCTCTGTTTCATTGCTGTTCTTCATCAATCGTAAGCGTTCCTGTTCTTATATCATGTAATAGCCTCGTGTTCTTGCTTTTTATTTTATGATTAGTCAAATTTCGATGACGAAAGAAACCGACCCTTTTCCACTAACCCACAAAAAGAGAAACAGTGAACTGAGCTTTTAAATTTTTTGCCATTTCTTGAGGATTATCATCATGTGGGTGTTTGGTATTTGTTGGTTATGAACTATTTTTTTATGCCCATTCAATCGGGTTCTTATATTAGTTTATTGTAATCCATATTGGGTGTATTTTTTTATGAATATTCTTGGACGAATTACAGGTGCGATACAAAAGAGAAGCTAAGTGGTAGCTTTCTCCGTGTCGAAGCATTGCTTAGAATTTCTTGGACGGTTCAATCGGATTTTAATTCGCTTTTTTCTATCCATATTTCAACTGGATTTCTCGATTCCTCTGCGATTCGTTGATTAATCGATTCATAATTTGATATGTCTTTTGCTTCATCGTTGATTATCTCTCCCAACGTCGAAATTTCCCCATCGATCTTCGGGTTTCTTGATTCAGTTCGCGATGGATCCCAAATTCTCGATTCTTCTAGATTCTTCTCGCGAAATCGAGCGGCGAATTTGATGAACAAGAAACAGAAACGAGTGAATCACTCTCACTCTATAGAATTGAAATATCCAATTCTTTGTCAAGGTGGATATGGCTCTGTTATTGCAGCAAGTATGGTGGCGAATCCCGCCGGAGAAATGGCAGTCTCGGCGGAGGAGAAGGTGTATAACGTAGTTATGAAACAGGCTGCTCTGGTGAAACGGCAACTGAGAACCGCCGGAGAATTGGATGTTAAGCCGGATATTGTTCTTCCGGGGACTCTTAGCTTGTTGAATGAAGCTTATGATCGTTGTGGTGAAGTTTGTGCAGAGTATGCCAAGACATTTTATCTGGGTTAGCCTTTTTTTGTTGAGATTTCTCTAACCAAAATCTCTGTTAATTGGATTCTTATCTGATTCGTGTTCTTATTGTTCTTAGGAACTATGTTGATGACTCCTGAGCGGCAAAAGGCTATTTGGGCAATTTATGGTAAGGGCTTTTCTTCTTTTCTGCTTTGACCGTCATCTATTTTGTGATATTCCACATTGGTTGGTTGGGAAGGATAAAGAAACACCCTTTATAAGGGTGTGGAAACCTTTTCCTAGAGCCCAAAGAAGACAATATCTACTAGCAGTGGACTTAAGTCGTTACGAATGGTATTAGAGCCAGACACCGAGCAATATGCCAACGAGGAGGCTATTCTCCGAAGGGGTAGATACGAAGTGGTGTGTCAGTAAAGACACTAGGGCTCGAAGGGAGTGGATTTGGTGGGAGTCCTGCATTGATTGGAGAAAGGAACAAGTGTCGGCAAGGACACTGGGCCCTGAAAGGGAGTGTGGATTGTGATAGATTGTGATATCCCACATTGGCAATATGCCAGCGAGGAGGCTATTCTCCAAAGGGGTAGATACGAGGCGGTGTGCCAGTAAAGACGTTAGGCCTTGAAGGGAGTGGATTTGGTGGGAGTCCCACATCGATTGGAGAAAGGAACGAGTGTCAATGAGGACGCTGGGCCCTGAAAGGGGATGGATTGTGATATCCCACATTGGTTGAGGAGGAGAACGAAACACCCTTTATTAGGGTGTGGAAACCTTTTTCTAGCAGACAATGTCTGCTAGCGGTGGGCTTGAGCCGTTACATAAGCATGATATCATTTCATCTCTGAAATCTGCAACTTTCTGGCATACATTTTTTCCCATTTCTGAGCCATTGATTTGAGAGAAAACTTGCCTTTGTTCTTGGCATAAAGTATGGTGTAGGAGAACAGATGAACTGGTTGATGGGCCAAATGCTTCGCACATAACACCTTCTGCATTGGACAGATGGGAGGCAAGGTTGGAAGATCTTTTCCAAGGGAGGCCATTTGATATGCTCGACGCAGCGTTAGCCGATACCGTTACTAAGTTTCCGGTTGATATTCAGGTTGGATATGGTTCGATCTAACACTAATGTCATACTAAATCTTATACGTTCGTACTTCGTTTGTACTTGTTTTCATGGATGTAGTAGCCATGGTGTTTTTGGTTATCGAGCGGATTGAAGTCTAATAGGTTTTCGATATTTGCAGCCGTTCAAAGATATGATCGAAGGGATGAGGATGGATCTAAGGAAGTCGAGATACAAGAATTTCGACGAACTGTATCTATATTGTTATTATGTTGCTGGAACTGTTGGGTTGATGAGTGTTCCTGTCATGGGCGTTGCACCTGACTCACAAGCAAGCACAGAGAGTGTGTATAATGCTGCTTTGGCGTTAGGCATTGCTAATCAGCTTACAAACATTCTTAGAGATGTTGGAGAAGAGTAAGTTCACTGCCCTTTAGTAGTGTACCTTAATGAAATTGGTTCATGTCCCAATTGTTGTCTTTCTAGTTGTCTAGTGTAGGTGTAAGTGTCGAAGTTTAAGAATTAACGACAAACTAAATAACTTAGATAGAATATGTAACGGTCTAAGCCCATCGCTAGCCACATTGTCCTCTTTAGGCTTTTTCTTCCAGGATTTCAGTTAAGGTTTTAAAACGCGTCTACTAAGGAGAGGTTTCCACATGCTTCTAAGGAATGCTTCATTCCCTTTCCAATCGATGTAGGGTCTCACAATCCACCTTCCTTGGGGGCCAGCGTACTCGTTGGCACACTGTTCAGTGTCTAGCTCTAATACCATTTGTAACAATCCAAGCCCATTGTTAACGGATATTGCCCTCTTTAGGCTTTTCCTTCATGGGTTTCACTCAAGGTTTTAAAACGTGTCTAGGTTTTCACATCACATCCTTCTAAGGAATGTTTCGTTTCCTTCCGAATCGATGTAGGATCTCACAATCCACCTCCCTTGGGGACCAACGTACTTGTTGGCAACTGTCCGATGTCTGGCTCTGATACCATTTGTAACAATCCAAGCCCACTGTTAGCCGATATTGCTCTTTTTAGGTTTTTCCTTCCTGAGTTTCACTCAAGGTTTTAAAACGTGTCTACTATGGAGAGGTTTCCACACCCTTATAAGAAATGTTTCGTTCCCTTCCCAATCGACGTAAGATCTCACAATCCACCTCCTTTGGGGGCCAGCGTACTCGTTGGCACACTATCCGTGTCTGACTCTGATACCACTTGTAACAGCCCAAGCCCACTGTTAGCAGTTATTGTCTTCTTTAAACTTTTCCTTCAACGGCTTCTTTCAAAGTTTTAAAACACGTCTACTAGGAAGAGGTTTCCACACCCTTATAAAGAATATTTCGCTCCTTCCCCAACCGATGTAGGATCTCACACAATACATCCAAACCACGGTATCCACCCAGATAACCTATGGTCGAATGATTGTCTAAGGTGCACACAAACTAGTTAGAACACTCACAAATTTTTGTCGTCGGGTTTAAAAAGATGTTAGATTCAAACGATTCGTTTTATGTATTCTAAGACGAACGAAAAGACGTTATAACGAACAAAATGTGTATAAAGTGCTAGAAGAGGAAGAATATATCTACCACAAGACGAGCTAGCTCAAGCTGGACTATCAGACGAGGACATATTCGCCGGAAGAGTAACAGATAAATGGAGAAACTTCATGAAGAATCAAATCAAAAGAGCCAGATTGTTCTTCGATGAGGCCGAGAAAGGAGTGTTGGAGCTTAACAAAGCTAGCAGATGGCCGGTACGTTTCCCTTCACGTCTTAAAATGATAGCTAGTTTTTGTAAGAACATGTTACTCATGAACACTTGTGGTATACAGGTGTGGGCTTCGTTGCTATTATATCGCCAAATCTTGGACGAGATTGAAGCAAATGACTACAACAACTTCACAAAGAGGGCATATGTGAGCAAAGCCAAGAAACTATTGGCTTTGCCAATGGCTTATGCAAGGTCTCTCCTTAGCCCTTAATGAACTCACATCACTATATATACTCAACAAACACAATCAAAATTCAGCTATCTCCATGTTCTTAACTATACAATGCCTCTTCCTACTAGCCATAGTGTGTCTAATTTCATTTTTTGTTCTCGAGAAGGTGTATGATGGGTGTCGGGTCTCGTTCGGGTGGAGATAGTTGAACCTTTTTAACCTCTTGATCGAGGGTACAACACTAACTTATTGATGGGTTTTGAATTTTTTGAGATGAAAAACGTGAAAAACAATCGTAATTTTATCGGGATGGGAGAGGAATAACCTAACGTTTTGATGTACACGTGATGGGAATTTAAAAGTAAATGGTGGATGTCGGTTCCATTAGTCTTTTCATTACCCTCTTTCTTTTTGTTTTCATTTCAAAATTAGCCATG

mRNA sequence

GGAGTTGATACTAAAAACAAAAAATGAAGTAACAATAGCTACAATTCCGACACTCTTATTTGTCTCAGCCCACAAGCGGAGCTGCAAGTTGCAGAAAATTCAACCCCCAGCACAGGGGAAAATATAAAAAAGAACTAGCCGAGCTCATGCAACCACACAGTTTGCGGATCAAATTCCGTGAGAGCCTCCATCCACCACCAAGCCCAAAAAGCGCACAGCCGCCTCGATTCAACTCACGTCCCCGCAACAAGAACACCCAATTCAATCACCCTTTTACACGATCAAACACCAAAGTGGAATCAAAACCCAGAAACAAATTCCAGAGCCCTCTCTGTTTCATTGCTGTTCTTCATCAATCGTGCGATACAAAAGAGAAGCTAAGTGGTAGCTTTCTCCGTGTCGAAGCATTGCTTAGAATTTCTTGGACGGTTCAATCGGATTTTAATTCGCTTTTTTCTATCCATATTTCAACTGGATTTCTCGATTCCTCTGCGATTCGTTGATTAATCGATTCATAATTTGATATGTCTTTTGCTTCATCGTTGATTATCTCTCCCAACGTCGAAATTTCCCCATCGATCTTCGGGTTTCTTGATTCAGTTCGCGATGGATCCCAAATTCTCGATTCTTCTAGATTCTTCTCGCGAAATCGAGCGGCGAATTTGATGAACAAGAAACAGAAACGAGTGAATCACTCTCACTCTATAGAATTGAAATATCCAATTCTTTGTCAAGGTGGATATGGCTCTGTTATTGCAGCAAGTATGGTGGCGAATCCCGCCGGAGAAATGGCAGTCTCGGCGGAGGAGAAGGTGTATAACGTAGTTATGAAACAGGCTGCTCTGGTGAAACGGCAACTGAGAACCGCCGGAGAATTGGATGTTAAGCCGGATATTGTTCTTCCGGGGACTCTTAGCTTGTTGAATGAAGCTTATGATCGTTGTGGTGAAGTTTGTGCAGAGTATGCCAAGACATTTTATCTGGTATGGTGTAGGAGAACAGATGAACTGGTTGATGGGCCAAATGCTTCGCACATAACACCTTCTGCATTGGACAGATGGGAGGCAAGGTTGGAAGATCTTTTCCAAGGGAGGCCATTTGATATGCTCGACGCAGCGTTAGCCGATACCGTTACTAAGTTTCCGGTTGATATTCAGCCGTTCAAAGATATGATCGAAGGGATGAGGATGGATCTAAGGAAGTCGAGATACAAGAATTTCGACGAACTGTATCTATATTGTTATTATGTTGCTGGAACTGTTGGGTTGATGAGTGTTCCTGTCATGGGCGTTGCACCTGACTCACAAGCAAGCACAGAGAGTGTGTATAATGCTGCTTTGGCGTTAGGCATTGCTAATCAGCTTACAAACATTCTTAGAGATGTTGGAGAAGATGCTAGAAGAGGAAGAATATATCTACCACAAGACGAGCTAGCTCAAGCTGGACTATCAGACGAGGACATATTCGCCGGAAGAGTAACAGATAAATGGAGAAACTTCATGAAGAATCAAATCAAAAGAGCCAGATTGTTCTTCGATGAGGCCGAGAAAGGAGTGTTGGAGCTTAACAAAGCTAGCAGATGGCCGGTGTGGGCTTCGTTGCTATTATATCGCCAAATCTTGGACGAGATTGAAGCAAATGACTACAACAACTTCACAAAGAGGGCATATGTGAGCAAAGCCAAGAAACTATTGGCTTTGCCAATGGCTTATGCAAGGTCTCTCCTTAGCCCTTAATGAACTCACATCACTATATATACTCAACAAACACAATCAAAATTCAGCTATCTCCATGTTCTTAACTATACAATGCCTCTTCCTACTAGCCATAGTGTGTCTAATTTCATTTTTTGTTCTCGAGAAGGTGTATGATGGGTGTCGGGTCTCGTTCGGGTGGAGATAGTTGAACCTTTTTAACCTCTTGATCGAGGGTACAACACTAACTTATTGATGGGTTTTGAATTTTTTGAGATGAAAAACGTGAAAAACAATCGTAATTTTATCGGGATGGGAGAGGAATAACCTAACGTTTTGATGTACACGTGATGGGAATTTAAAAGTAAATGGTGGATGTCGGTTCCATTAGTCTTTTCATTACCCTCTTTCTTTTTGTTTTCATTTCAAAATTAGCCATG

Coding sequence (CDS)

ATGTCTTTTGCTTCATCGTTGATTATCTCTCCCAACGTCGAAATTTCCCCATCGATCTTCGGGTTTCTTGATTCAGTTCGCGATGGATCCCAAATTCTCGATTCTTCTAGATTCTTCTCGCGAAATCGAGCGGCGAATTTGATGAACAAGAAACAGAAACGAGTGAATCACTCTCACTCTATAGAATTGAAATATCCAATTCTTTGTCAAGGTGGATATGGCTCTGTTATTGCAGCAAGTATGGTGGCGAATCCCGCCGGAGAAATGGCAGTCTCGGCGGAGGAGAAGGTGTATAACGTAGTTATGAAACAGGCTGCTCTGGTGAAACGGCAACTGAGAACCGCCGGAGAATTGGATGTTAAGCCGGATATTGTTCTTCCGGGGACTCTTAGCTTGTTGAATGAAGCTTATGATCGTTGTGGTGAAGTTTGTGCAGAGTATGCCAAGACATTTTATCTGGTATGGTGTAGGAGAACAGATGAACTGGTTGATGGGCCAAATGCTTCGCACATAACACCTTCTGCATTGGACAGATGGGAGGCAAGGTTGGAAGATCTTTTCCAAGGGAGGCCATTTGATATGCTCGACGCAGCGTTAGCCGATACCGTTACTAAGTTTCCGGTTGATATTCAGCCGTTCAAAGATATGATCGAAGGGATGAGGATGGATCTAAGGAAGTCGAGATACAAGAATTTCGACGAACTGTATCTATATTGTTATTATGTTGCTGGAACTGTTGGGTTGATGAGTGTTCCTGTCATGGGCGTTGCACCTGACTCACAAGCAAGCACAGAGAGTGTGTATAATGCTGCTTTGGCGTTAGGCATTGCTAATCAGCTTACAAACATTCTTAGAGATGTTGGAGAAGATGCTAGAAGAGGAAGAATATATCTACCACAAGACGAGCTAGCTCAAGCTGGACTATCAGACGAGGACATATTCGCCGGAAGAGTAACAGATAAATGGAGAAACTTCATGAAGAATCAAATCAAAAGAGCCAGATTGTTCTTCGATGAGGCCGAGAAAGGAGTGTTGGAGCTTAACAAAGCTAGCAGATGGCCGGTGTGGGCTTCGTTGCTATTATATCGCCAAATCTTGGACGAGATTGAAGCAAATGACTACAACAACTTCACAAAGAGGGCATATGTGAGCAAAGCCAAGAAACTATTGGCTTTGCCAATGGCTTATGCAAGGTCTCTCCTTAGCCCTTAA

Protein sequence

MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHSIELKYPILCQGGYGSVIAASMVANPAGEMAVSAEEKVYNVVMKQAALVKRQLRTAGELDVKPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLVWCRRTDELVDGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKGVLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP

Homology

[Close]

BLAST of Cp4.1LG13g05570 vs. Swiss-Prot
Match: PSY_CUCME (Phytoene synthase, chloroplastic OS=Cucumis melo GN=PSY PE=2 SV=1)

HSP 1 Score: 723.4 bits (1866), Expect = 1.4e-207
Identity = 369/421 (87.65%), Postives = 384/421 (91.21%), Query Frame = 1


Query: 1   MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHS 60
           MS ASSL++S NVE+SPS FGFLDSVRDG QI DS RF SRNR  NL+NKKQK  NHSHS
Sbjct: 1   MSLASSLVVSSNVELSPSSFGFLDSVRDGPQIPDSFRFSSRNRVPNLINKKQKWGNHSHS 60

Query: 61  IELKYPILCQGGYGSVIAASMVANPAGEMAVSAEEKVYNVVMKQAALVKRQLRTAGELDV 120
            ELKYPIL + GYGSVI ASMVANPAGE+AVSAE+KVYNVVMKQAALVKRQLRTAGELDV
Sbjct: 61  TELKYPILHESGYGSVIVASMVANPAGEIAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL-----------------VWCRRTDELV 180
           KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL                 VWCRRTDELV
Sbjct: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITP+ALDRWEARLE+LFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD
Sbjct: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQL-TN 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMG+AP+SQASTESVYNAALALGIANQ   N
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQAPPN 300

Query: 301 ILRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEK 360
           ILRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRAR+FFDEAEK
Sbjct: 301 ILRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARMFFDEAEK 360

Query: 361 GVLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLS 404
           GVLELNKASRWPVWASLLLYRQILDEIEANDY+NFTKRAYVSKAKK+LALPMAY R+LL 
Sbjct: 361 GVLELNKASRWPVWASLLLYRQILDEIEANDYDNFTKRAYVSKAKKILALPMAYGRALLG 420

[Close]

BLAST of Cp4.1LG13g05570 vs. Swiss-Prot
Match: PSY_CAPAN (Bifunctional 15-cis-phytoene synthase, chromoplastic OS=Capsicum annuum GN=PSY1 PE=1 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 1.8e-159
Identity = 301/421 (71.50%), Postives = 341/421 (81.00%), Query Frame = 1


Query: 1   MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHS 60
           MS A   ++SP  ++S    GFL SVR+G++I DSS    RN A N   ++ KR      
Sbjct: 1   MSVALLWVVSP-CDVSNGT-GFLVSVREGNRIFDSSG--RRNLACN---ERIKRGGGKQR 60

Query: 61  IEL-KYPILCQGGYGSV--IAASMVANPAGEMAVSAEEKVYNVVMKQAALVKRQLRTAGE 120
                Y    Q G G    + +++VA PAGEM +S+E  VY+VV++QAALVKRQLR+  E
Sbjct: 61  WSFGSYLGGAQTGSGRKFSVRSAIVATPAGEMTMSSERMVYDVVLRQAALVKRQLRSTDE 120

Query: 121 LDVKPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL-----------------VWCRRTD 180
           LDVK DI +PGTL LL+EAYDRC EVCAEYAKTFYL                 VWCRRTD
Sbjct: 121 LDVKKDIPIPGTLGLLSEAYDRCSEVCAEYAKTFYLGTMLMTPERRKAIWAIYVWCRRTD 180

Query: 181 ELVDGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGM 240
           ELVDGPNASHITP+ALDRWE RLED+F GRPFDMLDAAL+DTV+KFPVDIQPF+DMIEGM
Sbjct: 181 ELVDGPNASHITPAALDRWEDRLEDVFSGRPFDMLDAALSDTVSKFPVDIQPFRDMIEGM 240

Query: 241 RMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQL 300
           RMDLRKSRY+NFDELYLYCYYVAGTVGLMSVP+MG+AP+S+A+TESVYNAALALGIANQL
Sbjct: 241 RMDLRKSRYRNFDELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQL 300

Query: 301 TNILRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEA 360
           TNILRDVGEDARRGR+YLPQDELAQAGLSDEDIFAGRVTDKWR FMK QI+RAR FFDEA
Sbjct: 301 TNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGRVTDKWRIFMKKQIQRARKFFDEA 360

Query: 361 EKGVLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSL 402
           EKGV EL+ ASRWPV ASLLLYR+ILDEIEANDYNNFTKRAYVSK KKL+ALP+AYA+SL
Sbjct: 361 EKGVTELSAASRWPVLASLLLYRRILDEIEANDYNNFTKRAYVSKPKKLIALPIAYAKSL 414

[Close]

BLAST of Cp4.1LG13g05570 vs. Swiss-Prot
Match: PSY_ARATH (Phytoene synthase, chloroplastic OS=Arabidopsis thaliana GN=PSY1 PE=2 SV=2)

HSP 1 Score: 563.1 bits (1450), Expect = 2.4e-159
Identity = 288/393 (73.28%), Postives = 332/393 (84.48%), Query Frame = 1


Query: 31  QILDSSRFFS--RNRAANLMNKKQKRVNHSHSIELKYPILCQGGYGSVIAASMVANPAGE 90
           ++L+SSR FS  +N+  N   KKQ     S  +  +   +       V+++S+VA+P+GE
Sbjct: 27  RVLESSRLFSPCQNQRLNKGKKKQIPTWSSSFVRNRSRRI------GVVSSSLVASPSGE 86

Query: 91  MAVSAEEKVYNVVMKQAALVKRQLRTAG-ELDVKP--DIVLPGTLSLLNEAYDRCGEVCA 150
           +A+S+EEKVYNVV+KQAALV +QLR++  +LDVK   D+VLPG+LSLL EAYDRCGEVCA
Sbjct: 87  IALSSEEKVYNVVLKQAALVNKQLRSSSYDLDVKKPQDVVLPGSLSLLGEAYDRCGEVCA 146

Query: 151 EYAKTFYL-----------------VWCRRTDELVDGPNASHITPSALDRWEARLEDLFQ 210
           EYAKTFYL                 VWCRRTDELVDGPNASHITP ALDRWEARLEDLF+
Sbjct: 147 EYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPMALDRWEARLEDLFR 206

Query: 211 GRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGL 270
           GRPFDMLDAALADTV ++PVDIQPF+DMIEGMRMDL+KSRY+NFD+LYLYCYYVAGTVGL
Sbjct: 207 GRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQNFDDLYLYCYYVAGTVGL 266

Query: 271 MSVPVMGVAPDSQASTESVYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGL 330
           MSVPVMG+ P S+A+TESVYNAALALGIANQLTNILRDVGEDARRGR+YLPQDELAQAGL
Sbjct: 267 MSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGL 326

Query: 331 SDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKGVLELNKASRWPVWASLLLYRQILDE 390
           SDEDIFAG+VTDKWRNFMK Q+KRAR+FFDEAEKGV EL+ ASRWPVWASLLLYR+ILDE
Sbjct: 327 SDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELSAASRWPVWASLLLYRRILDE 386

Query: 391 IEANDYNNFTKRAYVSKAKKLLALPMAYARSLL 402
           IEANDYNNFTKRAYV K KK+ ALP+AYA+S+L
Sbjct: 387 IEANDYNNFTKRAYVGKVKKIAALPLAYAKSVL 413

[Close]

BLAST of Cp4.1LG13g05570 vs. Swiss-Prot
Match: PSY1_SOLLC (Phytoene synthase 1, chloroplastic OS=Solanum lycopersicum GN=PSY1 PE=1 SV=2)

HSP 1 Score: 557.4 bits (1435), Expect = 1.3e-157
Identity = 288/420 (68.57%), Postives = 339/420 (80.71%), Query Frame = 1


Query: 1   MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHS 60
           MS A   ++SP  ++S     F++SVR+G++  DSSR   RN  +N      +R+N    
Sbjct: 1   MSVALLWVVSP-CDVSNGT-SFMESVREGNRFFDSSRH--RNLVSN------ERINRGGG 60

Query: 61  IELKYPILCQGGYGSVIAASMVANPAGEMAVSAEEKVYNVVMKQAALVKRQLRTAGELDV 120
            +         G    + ++++A P+GE  +++E+ VY+VV++QAALVKRQLR+  EL+V
Sbjct: 61  KQTN------NGRKFSVRSAILATPSGERTMTSEQMVYDVVLRQAALVKRQLRSTNELEV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL-----------------VWCRRTDELV 180
           KPDI +PG L LL+EAYDRCGEVCAEYAKTF L                 VWCRRTDELV
Sbjct: 121 KPDIPIPGNLGLLSEAYDRCGEVCAEYAKTFNLGTMLMTPERRRAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNAS+ITP+ALDRWE RLED+F GRPFDMLD AL+DTV+ FPVDIQPF+DMIEGMRMD
Sbjct: 181 DGPNASYITPAALDRWENRLEDVFNGRPFDMLDGALSDTVSNFPVDIQPFRDMIEGMRMD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQLTNI 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVP+MG+AP+S+A+TESVYNAALALGIANQLTNI
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNI 300

Query: 301 LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKG 360
           LRDVGEDARRGR+YLPQDELAQAGLSDEDIFAGRVTDKWR FMK QI RAR FFDEAEKG
Sbjct: 301 LRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGRVTDKWRIFMKKQIHRARKFFDEAEKG 360

Query: 361 VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP 404
           V EL+ ASR+PVWASL+LYR+ILDEIEANDYNNFTKRAYVSK+KKL+ALP+AYA+SL+ P
Sbjct: 361 VTELSSASRFPVWASLVLYRKILDEIEANDYNNFTKRAYVSKSKKLIALPIAYAKSLVPP 404

[Close]

BLAST of Cp4.1LG13g05570 vs. Swiss-Prot
Match: PSY_NARPS (Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus GN=PSY PE=2 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 7.2e-156
Identity = 280/386 (72.54%), Postives = 318/386 (82.38%), Query Frame = 1


Query: 39  FSRNRAANLMNKKQKRVNHSHSIELKYPIL---CQGGYGSVIAASMVANPAGEMAVSAEE 98
           FS  +  NL  KK +   +S     KY  +    +     +I +S+VANPAGE  +S+E+
Sbjct: 27  FSSPKYDNLGRKKSRLSVYSLYTTSKYACVGFEAENNGKFLIRSSLVANPAGEATISSEQ 86

Query: 99  KVYNVVMKQAALVKRQLRTAGE-LDVKPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL- 158
           KVY+VV+KQAALVK Q +++ +  DVKPDIVLPGT+ LL +AYDRCGEVCAEYAKTFYL 
Sbjct: 87  KVYDVVLKQAALVKDQTKSSRKSTDVKPDIVLPGTVYLLKDAYDRCGEVCAEYAKTFYLG 146

Query: 159 ----------------VWCRRTDELVDGPNASHITPSALDRWEARLEDLFQGRPFDMLDA 218
                           VWCRRTDELVDG NASHITPSALDRWEARLEDLF GRP+DM DA
Sbjct: 147 TLLMTPERRRAIWAIYVWCRRTDELVDGHNASHITPSALDRWEARLEDLFAGRPYDMFDA 206

Query: 219 ALADTVTKFPVDIQPFKDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVA 278
           AL+DTV++FPVDIQPF DM+EGMRMDL+KSRYKNFDELYLYCYYVAGTVGLMSVPVMG+A
Sbjct: 207 ALSDTVSRFPVDIQPFMDMVEGMRMDLKKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIA 266

Query: 279 PDSQASTESVYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGR 338
           P+S A  ESVYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELA+AGLSDED+F G+
Sbjct: 267 PESLAEAESVYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELAEAGLSDEDVFTGK 326

Query: 339 VTDKWRNFMKNQIKRARLFFDEAEKGVLELNKASRWPVWASLLLYRQILDEIEANDYNNF 398
           VTDKWR+FMK QIKRAR FF++AEKGV EL++ASRWPVWASLLLYRQILDEIEANDYNNF
Sbjct: 327 VTDKWRSFMKRQIKRARTFFEQAEKGVTELSQASRWPVWASLLLYRQILDEIEANDYNNF 386

Query: 399 TKRAYVSKAKKLLALPMAYARSLLSP 404
           TKRAYVSK K+L ALP+AY +SLL P
Sbjct: 387 TKRAYVSKVKRLAALPLAYGKSLLIP 412

[Close]

BLAST of Cp4.1LG13g05570 vs. TrEMBL
Match: U3L3E8_CUCPE (Phytoene synthase OS=Cucurbita pepo subsp. pepo GN=PSYA PE=2 SV=1)

HSP 1 Score: 788.9 bits (2036), Expect = 3.0e-225
Identity = 403/420 (95.95%), Postives = 403/420 (95.95%), Query Frame = 1


Query: 1   MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHS 60
           MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHS
Sbjct: 1   MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHS 60

Query: 61  IELKYPILCQGGYGSVIAASMVANPAGEMAVSAEEKVYNVVMKQAALVKRQLRTAGELDV 120
           IELKYPILCQGGYGSVIAASMVANPAGEMAVSAEEKVYNVVMKQAALVKRQLRTAGELDV
Sbjct: 61  IELKYPILCQGGYGSVIAASMVANPAGEMAVSAEEKVYNVVMKQAALVKRQLRTAGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL-----------------VWCRRTDELV 180
           KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL                 VWCRRTDELV
Sbjct: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD
Sbjct: 181 DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQLTNI 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQLTNI
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQLTNI 300

Query: 301 LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKG 360
           LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKG
Sbjct: 301 LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKG 360

Query: 361 VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP 404
           VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP
Sbjct: 361 VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP 420

[Close]

BLAST of Cp4.1LG13g05570 vs. TrEMBL
Match: U3L4A0_CUCPE (Phytoene synthase OS=Cucurbita pepo subsp. ovifera GN=PSYA PE=2 SV=1)

HSP 1 Score: 782.3 bits (2019), Expect = 2.8e-223
Identity = 399/420 (95.00%), Postives = 401/420 (95.48%), Query Frame = 1


Query: 1   MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHS 60
           MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHS
Sbjct: 1   MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHS 60

Query: 61  IELKYPILCQGGYGSVIAASMVANPAGEMAVSAEEKVYNVVMKQAALVKRQLRTAGELDV 120
           IELKYPILCQGGYGSVIAASMVANPAGEMAVSAEE+VYNVVMKQAALVKRQLRTAGELDV
Sbjct: 61  IELKYPILCQGGYGSVIAASMVANPAGEMAVSAEERVYNVVMKQAALVKRQLRTAGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL-----------------VWCRRTDELV 180
           KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL                 VWCRRTDELV
Sbjct: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADT+TKFPVDIQPFKDMIEGMRMD
Sbjct: 181 DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTLTKFPVDIQPFKDMIEGMRMD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQLTNI 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDS ASTESVYNAALALGIANQLTNI
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSHASTESVYNAALALGIANQLTNI 300

Query: 301 LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKG 360
           LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWR FMKNQIKRARLFFDEAEKG
Sbjct: 301 LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRTFMKNQIKRARLFFDEAEKG 360

Query: 361 VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP 404
           VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP
Sbjct: 361 VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP 420

[Close]

BLAST of Cp4.1LG13g05570 vs. TrEMBL
Match: G1FEA2_CUCMO (Chloroplast phytoene synthase OS=Cucurbita moschata GN=PSY PE=2 SV=1)

HSP 1 Score: 775.0 bits (2000), Expect = 4.4e-221
Identity = 396/420 (94.29%), Postives = 398/420 (94.76%), Query Frame = 1


Query: 1   MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHS 60
           MSFASSLIIS NVEISPSIFGFLDSVRDGSQILDSSRFFSRNR ANLMNKKQKRVNHSHS
Sbjct: 1   MSFASSLIISLNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRVANLMNKKQKRVNHSHS 60

Query: 61  IELKYPILCQGGYGSVIAASMVANPAGEMAVSAEEKVYNVVMKQAALVKRQLRTAGELDV 120
            ELKYPILCQGGYGSVIAASM+ANPAGEMAVSAEEKVYNVV+KQAALVKRQLRTAGELDV
Sbjct: 61  TELKYPILCQGGYGSVIAASMMANPAGEMAVSAEEKVYNVVLKQAALVKRQLRTAGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL-----------------VWCRRTDELV 180
           KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL                 VWCRRTDELV
Sbjct: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMR D
Sbjct: 181 DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRTD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQLTNI 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQLTNI
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQLTNI 300

Query: 301 LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKG 360
           LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKG
Sbjct: 301 LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKG 360

Query: 361 VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP 404
           VLELNKASRWPVWASLLLYRQ LDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP
Sbjct: 361 VLELNKASRWPVWASLLLYRQTLDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP 420

[Close]

BLAST of Cp4.1LG13g05570 vs. TrEMBL
Match: U5KQ18_CITLA (Phytoene synthase OS=Citrullus lanatus GN=psy PE=2 SV=1)

HSP 1 Score: 758.8 bits (1958), Expect = 3.3e-216
Identity = 382/420 (90.95%), Postives = 396/420 (94.29%), Query Frame = 1


Query: 1   MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHS 60
           MSFA SL++SPNVE+SPS FGFLDSVRDGSQI DSSRFFSRNRAANLM+KKQK  NHSHS
Sbjct: 1   MSFAPSLVVSPNVELSPSSFGFLDSVRDGSQIPDSSRFFSRNRAANLMSKKQKWGNHSHS 60

Query: 61  IELKYPILCQGGYGSVIAASMVANPAGEMAVSAEEKVYNVVMKQAALVKRQLRTAGELDV 120
            ELKYPILC+GGYGSVIAASMVANPAGEMAVSAE+KVYNVVMKQAALVKRQLRTAGELDV
Sbjct: 61  TELKYPILCEGGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL-----------------VWCRRTDELV 180
           KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL                 VWCRRTDELV
Sbjct: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITP+ALDRWEARLE+LFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD
Sbjct: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQLTNI 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVP+MG+APDSQASTESVYN+ALALGIANQLTNI
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPIMGIAPDSQASTESVYNSALALGIANQLTNI 300

Query: 301 LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKG 360
           LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMK+QIKRAR+FFDEAEKG
Sbjct: 301 LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKSQIKRARMFFDEAEKG 360

Query: 361 VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP 404
           VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKK+LALPMAYARSLL P
Sbjct: 361 VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKILALPMAYARSLLGP 420

[Close]

BLAST of Cp4.1LG13g05570 vs. TrEMBL
Match: A0A0A0KPV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G320430 PE=4 SV=1)

HSP 1 Score: 737.3 bits (1902), Expect = 1.0e-209
Identity = 371/420 (88.33%), Postives = 388/420 (92.38%), Query Frame = 1


Query: 1   MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHS 60
           MSF SSL++SPNVE+SPS FGFLDS+RDG QI DS RFFSRNR  NL+NK+QK  N SHS
Sbjct: 1   MSFTSSLVVSPNVELSPSNFGFLDSLRDGPQIPDSFRFFSRNRVPNLINKRQKWGNPSHS 60

Query: 61  IELKYPILCQGGYGSVIAASMVANPAGEMAVSAEEKVYNVVMKQAALVKRQLRTAGELDV 120
            ELKYPILC+ GYGSVIAASMVANPAGEMAVSAE+KVYNVVMKQAALVKRQLRTAGELDV
Sbjct: 61  TELKYPILCESGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL-----------------VWCRRTDELV 180
           KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL                 VWCRRTDELV
Sbjct: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITP+ALDRWEARLE+LFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD
Sbjct: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQLTNI 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMG+AP+S+ASTESVYNAALALGIANQLTNI
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQLTNI 300

Query: 301 LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKG 360
           LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMK+QIKRAR+FFDEAEKG
Sbjct: 301 LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKSQIKRARMFFDEAEKG 360

Query: 361 VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP 404
           VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYV K KK+LALPMAYAR+LL P
Sbjct: 361 VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVRKGKKILALPMAYARALLGP 420

[Close]

BLAST of Cp4.1LG13g05570 vs. TAIR10
Match: AT5G17230.3 (AT5G17230.3 PHYTOENE SYNTHASE)

HSP 1 Score: 557.4 bits (1435), Expect = 7.3e-159
Identity = 288/408 (70.59%), Postives = 332/408 (81.37%), Query Frame = 1


Query: 31  QILDSSRFFS--RNRAANLMNKKQKRVNHSHSIELKYPILCQGGYGSVIAASMVANPAGE 90
           ++L+SSR FS  +N+  N   KKQ     S  +  +   +       V+++S+VA+P+GE
Sbjct: 27  RVLESSRLFSPCQNQRLNKGKKKQIPTWSSSFVRNRSRRI------GVVSSSLVASPSGE 86

Query: 91  MAVSAEEKVYNVVMKQAALVKRQLRTAG-ELDVKP--DIVLPGTLSLLNEAYDRCGEVCA 150
           +A+S+EEKVYNVV+KQAALV +QLR++  +LDVK   D+VLPG+LSLL EAYDRCGEVCA
Sbjct: 87  IALSSEEKVYNVVLKQAALVNKQLRSSSYDLDVKKPQDVVLPGSLSLLGEAYDRCGEVCA 146

Query: 151 EYAKTFYL--------------------------------VWCRRTDELVDGPNASHITP 210
           EYAKTFYL                                VWCRRTDELVDGPNASHITP
Sbjct: 147 EYAKTFYLGTLLMTPERRKAIWAIYVMLKVDFYKQSIVALVWCRRTDELVDGPNASHITP 206

Query: 211 SALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMDLRKSRYKNFD 270
            ALDRWEARLEDLF+GRPFDMLDAALADTV ++PVDIQPF+DMIEGMRMDL+KSRY+NFD
Sbjct: 207 MALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQNFD 266

Query: 271 ELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQLTNILRDVGEDARR 330
           +LYLYCYYVAGTVGLMSVPVMG+ P S+A+TESVYNAALALGIANQLTNILRDVGEDARR
Sbjct: 267 DLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGEDARR 326

Query: 331 GRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKGVLELNKASRW 390
           GR+YLPQDELAQAGLSDEDIFAG+VTDKWRNFMK Q+KRAR+FFDEAEKGV EL+ ASRW
Sbjct: 327 GRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELSAASRW 386

Query: 391 PVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLL 402
           PVWASLLLYR+ILDEIEANDYNNFTKRAYV K KK+ ALP+AYA+S+L
Sbjct: 387 PVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKSVL 428

[Close]

BLAST of Cp4.1LG13g05570 vs. NCBI nr
Match: gi|524852992|gb|AFV33362.1| (phytoene synthase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 788.9 bits (2036), Expect = 4.3e-225
Identity = 403/420 (95.95%), Postives = 403/420 (95.95%), Query Frame = 1


Query: 1   MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHS 60
           MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHS
Sbjct: 1   MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHS 60

Query: 61  IELKYPILCQGGYGSVIAASMVANPAGEMAVSAEEKVYNVVMKQAALVKRQLRTAGELDV 120
           IELKYPILCQGGYGSVIAASMVANPAGEMAVSAEEKVYNVVMKQAALVKRQLRTAGELDV
Sbjct: 61  IELKYPILCQGGYGSVIAASMVANPAGEMAVSAEEKVYNVVMKQAALVKRQLRTAGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL-----------------VWCRRTDELV 180
           KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL                 VWCRRTDELV
Sbjct: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD
Sbjct: 181 DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQLTNI 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQLTNI
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQLTNI 300

Query: 301 LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKG 360
           LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKG
Sbjct: 301 LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKG 360

Query: 361 VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP 404
           VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP
Sbjct: 361 VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP 420

[Close]

BLAST of Cp4.1LG13g05570 vs. NCBI nr
Match: gi|524852990|gb|AFV33361.1| (phytoene synthase [Cucurbita pepo subsp. ovifera])

HSP 1 Score: 782.3 bits (2019), Expect = 4.0e-223
Identity = 399/420 (95.00%), Postives = 401/420 (95.48%), Query Frame = 1


Query: 1   MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHS 60
           MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHS
Sbjct: 1   MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHS 60

Query: 61  IELKYPILCQGGYGSVIAASMVANPAGEMAVSAEEKVYNVVMKQAALVKRQLRTAGELDV 120
           IELKYPILCQGGYGSVIAASMVANPAGEMAVSAEE+VYNVVMKQAALVKRQLRTAGELDV
Sbjct: 61  IELKYPILCQGGYGSVIAASMVANPAGEMAVSAEERVYNVVMKQAALVKRQLRTAGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL-----------------VWCRRTDELV 180
           KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL                 VWCRRTDELV
Sbjct: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADT+TKFPVDIQPFKDMIEGMRMD
Sbjct: 181 DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTLTKFPVDIQPFKDMIEGMRMD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQLTNI 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDS ASTESVYNAALALGIANQLTNI
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSHASTESVYNAALALGIANQLTNI 300

Query: 301 LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKG 360
           LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWR FMKNQIKRARLFFDEAEKG
Sbjct: 301 LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRTFMKNQIKRARLFFDEAEKG 360

Query: 361 VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP 404
           VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP
Sbjct: 361 VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP 420

[Close]

BLAST of Cp4.1LG13g05570 vs. NCBI nr
Match: gi|341657779|gb|AEK86564.1| (chloroplast phytoene synthase [Cucurbita moschata])

HSP 1 Score: 775.0 bits (2000), Expect = 6.4e-221
Identity = 396/420 (94.29%), Postives = 398/420 (94.76%), Query Frame = 1


Query: 1   MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHS 60
           MSFASSLIIS NVEISPSIFGFLDSVRDGSQILDSSRFFSRNR ANLMNKKQKRVNHSHS
Sbjct: 1   MSFASSLIISLNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRVANLMNKKQKRVNHSHS 60

Query: 61  IELKYPILCQGGYGSVIAASMVANPAGEMAVSAEEKVYNVVMKQAALVKRQLRTAGELDV 120
            ELKYPILCQGGYGSVIAASM+ANPAGEMAVSAEEKVYNVV+KQAALVKRQLRTAGELDV
Sbjct: 61  TELKYPILCQGGYGSVIAASMMANPAGEMAVSAEEKVYNVVLKQAALVKRQLRTAGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL-----------------VWCRRTDELV 180
           KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL                 VWCRRTDELV
Sbjct: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMR D
Sbjct: 181 DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRTD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQLTNI 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQLTNI
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQLTNI 300

Query: 301 LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKG 360
           LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKG
Sbjct: 301 LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKG 360

Query: 361 VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP 404
           VLELNKASRWPVWASLLLYRQ LDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP
Sbjct: 361 VLELNKASRWPVWASLLLYRQTLDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP 420

[Close]

BLAST of Cp4.1LG13g05570 vs. NCBI nr
Match: gi|531430872|gb|AGT57744.1| (phytoene synthase [Citrullus lanatus])

HSP 1 Score: 758.8 bits (1958), Expect = 4.7e-216
Identity = 382/420 (90.95%), Postives = 396/420 (94.29%), Query Frame = 1


Query: 1   MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHS 60
           MSFA SL++SPNVE+SPS FGFLDSVRDGSQI DSSRFFSRNRAANLM+KKQK  NHSHS
Sbjct: 1   MSFAPSLVVSPNVELSPSSFGFLDSVRDGSQIPDSSRFFSRNRAANLMSKKQKWGNHSHS 60

Query: 61  IELKYPILCQGGYGSVIAASMVANPAGEMAVSAEEKVYNVVMKQAALVKRQLRTAGELDV 120
            ELKYPILC+GGYGSVIAASMVANPAGEMAVSAE+KVYNVVMKQAALVKRQLRTAGELDV
Sbjct: 61  TELKYPILCEGGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL-----------------VWCRRTDELV 180
           KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL                 VWCRRTDELV
Sbjct: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITP+ALDRWEARLE+LFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD
Sbjct: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQLTNI 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVP+MG+APDSQASTESVYN+ALALGIANQLTNI
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPIMGIAPDSQASTESVYNSALALGIANQLTNI 300

Query: 301 LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKG 360
           LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMK+QIKRAR+FFDEAEKG
Sbjct: 301 LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKSQIKRARMFFDEAEKG 360

Query: 361 VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP 404
           VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKK+LALPMAYARSLL P
Sbjct: 361 VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKILALPMAYARSLLGP 420

[Close]

BLAST of Cp4.1LG13g05570 vs. NCBI nr
Match: gi|449462356|ref|XP_004148907.1| (PREDICTED: phytoene synthase, chloroplastic [Cucumis sativus])

HSP 1 Score: 737.3 bits (1902), Expect = 1.5e-209
Identity = 371/420 (88.33%), Postives = 388/420 (92.38%), Query Frame = 1


Query: 1   MSFASSLIISPNVEISPSIFGFLDSVRDGSQILDSSRFFSRNRAANLMNKKQKRVNHSHS 60
           MSF SSL++SPNVE+SPS FGFLDS+RDG QI DS RFFSRNR  NL+NK+QK  N SHS
Sbjct: 1   MSFTSSLVVSPNVELSPSNFGFLDSLRDGPQIPDSFRFFSRNRVPNLINKRQKWGNPSHS 60

Query: 61  IELKYPILCQGGYGSVIAASMVANPAGEMAVSAEEKVYNVVMKQAALVKRQLRTAGELDV 120
            ELKYPILC+ GYGSVIAASMVANPAGEMAVSAE+KVYNVVMKQAALVKRQLRTAGELDV
Sbjct: 61  TELKYPILCESGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL-----------------VWCRRTDELV 180
           KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYL                 VWCRRTDELV
Sbjct: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPSALDRWEARLEDLFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITP+ALDRWEARLE+LFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD
Sbjct: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGVAPDSQASTESVYNAALALGIANQLTNI 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMG+AP+S+ASTESVYNAALALGIANQLTNI
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQLTNI 300

Query: 301 LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARLFFDEAEKG 360
           LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMK+QIKRAR+FFDEAEKG
Sbjct: 301 LRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKSQIKRARMFFDEAEKG 360

Query: 361 VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLLALPMAYARSLLSP 404
           VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYV K KK+LALPMAYAR+LL P
Sbjct: 361 VLELNKASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVRKGKKILALPMAYARALLGP 420

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g05570 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PSY_CUCME	1.4e-207	87.65	Phytoene synthase, chloroplastic OS=Cucumis melo GN=PSY PE=2 SV=1	[more]
PSY_CAPAN	1.8e-159	71.50	Bifunctional 15-cis-phytoene synthase, chromoplastic OS=Capsicum annuum GN=PSY1 ...	[more]
PSY_ARATH	2.4e-159	73.28	Phytoene synthase, chloroplastic OS=Arabidopsis thaliana GN=PSY1 PE=2 SV=2	[more]
PSY1_SOLLC	1.3e-157	68.57	Phytoene synthase 1, chloroplastic OS=Solanum lycopersicum GN=PSY1 PE=1 SV=2	[more]
PSY_NARPS	7.2e-156	72.54	Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus GN=PSY PE=2 SV=1	[more]

BLAST of Cp4.1LG13g05570 vs. TrEMBL


Match Name	E-value	Identity	Description
U3L3E8_CUCPE	3.0e-225	95.95	Phytoene synthase OS=Cucurbita pepo subsp. pepo GN=PSYA PE=2 SV=1	[more]
U3L4A0_CUCPE	2.8e-223	95.00	Phytoene synthase OS=Cucurbita pepo subsp. ovifera GN=PSYA PE=2 SV=1	[more]
G1FEA2_CUCMO	4.4e-221	94.29	Chloroplast phytoene synthase OS=Cucurbita moschata GN=PSY PE=2 SV=1	[more]
U5KQ18_CITLA	3.3e-216	90.95	Phytoene synthase OS=Citrullus lanatus GN=psy PE=2 SV=1	[more]
A0A0A0KPV0_CUCSA	1.0e-209	88.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G320430 PE=4 SV=1	[more]

BLAST of Cp4.1LG13g05570 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17230.3	7.3e-159	70.59	PHYTOENE SYNTHASE	[more]

BLAST of Cp4.1LG13g05570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|524852992\|gb\|AFV33362.1\|	4.3e-225	95.95	phytoene synthase [Cucurbita pepo subsp. pepo]	[more]
gi\|524852990\|gb\|AFV33361.1\|	4.0e-223	95.00	phytoene synthase [Cucurbita pepo subsp. ovifera]	[more]
gi\|341657779\|gb\|AEK86564.1\|	6.4e-221	94.29	chloroplast phytoene synthase [Cucurbita moschata]	[more]
gi\|531430872\|gb\|AGT57744.1\|	4.7e-216	90.95	phytoene synthase [Citrullus lanatus]	[more]
gi\|449462356\|ref\|XP_004148907.1\|	1.5e-209	88.33	PREDICTED: phytoene synthase, chloroplastic [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016740	transferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0009058	biosynthetic process

Vocabulary: **INTERPRO**
Term	Definition
IPR019845	Squalene/phytoene_synthase_CS
IPR008949	Isoprenoid_synthase_dom_sf
IPR002060	Squ/phyt_synthse

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016120	carotene biosynthetic process
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0016102	diterpenoid biosynthetic process
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0006655	phosphatidylglycerol biosynthetic process
biological_process	GO:0006694	steroid biosynthetic process
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0006696	ergosterol biosynthetic process
biological_process	GO:0016117	carotenoid biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0010287	plastoglobule
molecular_function	GO:0046905	phytoene synthase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups
molecular_function	GO:0004310	farnesyl-diphosphate farnesyltransferase activity
molecular_function	GO:0051996	squalene synthase activity
molecular_function	GO:0016767	geranylgeranyl-diphosphate geranylgeranyltransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g05570.1	Cp4.1LG13g05570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002060	Squalene/phytoene synthase	PFAM	PF00494	SQS_PSY	coord: 155..385 score: 3.0
IPR008949	Isoprenoid synthase domain	GENE3D	G3DSA:1.10.600.10		coord: 133..401 score: 9.3E
IPR008949	Isoprenoid synthase domain	unknown	SSF48576	Terpenoid synthases	coord: 136..400 score: 3.96
IPR019845	Squalene/phytoene synthase, conserved site	PROSITE	PS01044	SQUALEN_PHYTOEN_SYN_1	coord: 238..253 scor
IPR019845	Squalene/phytoene synthase, conserved site	PROSITE	PS01045	SQUALEN_PHYTOEN_SYN_2	coord: 274..299 scor
None	No IPR available	PANTHER	PTHR31480	FAMILY NOT NAMED	coord: 1..403 score: 5.6E
None	No IPR available	PANTHER	PTHR31480:SF2	PHYTOENE SYNTHASE, CHLOROPLASTIC	coord: 1..403 score: 5.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG13g05570	Cucsa.173570	Cucumber (Gy14) v1	cgycpeB0476
Cp4.1LG13g05570	CmaCh15G007680	Cucurbita maxima (Rimu)	cmacpeB305
Cp4.1LG13g05570	CmaCh04G022670	Cucurbita maxima (Rimu)	cmacpeB705
Cp4.1LG13g05570	CmoCh04G023720	Cucurbita moschata (Rifu)	cmocpeB657
Cp4.1LG13g05570	CmoCh15G007980	Cucurbita moschata (Rifu)	cmocpeB268
Cp4.1LG13g05570	Cla009122	Watermelon (97103) v1	cpewmB185
Cp4.1LG13g05570	Csa5G320430	Cucumber (Chinese Long) v2	cpecuB180
Cp4.1LG13g05570	MELO3C025102	Melon (DHL92) v3.5.1	cpemeB151
Cp4.1LG13g05570	ClCG01G008470	Watermelon (Charleston Gray)	cpewcgB166
Cp4.1LG13g05570	Lsi09G008920	Bottle gourd (USVL1VR-Ls)	cpelsiB130
Cp4.1LG13g05570	MELO3C025102.2	Melon (DHL92) v3.6.1	cpemedB178
Cp4.1LG13g05570	CsaV3_5G020340	Cucumber (Chinese Long) v3	cpecucB0215
Cp4.1LG13g05570	Bhi12G001030	Wax gourd	cpewgoB0218
Cp4.1LG13g05570	CsGy5G013410	Cucumber (Gy14) v2	cgybcpeB603
Cp4.1LG13g05570	Carg01435	Silver-seed gourd	carcpeB1157
Cp4.1LG13g05570	Carg18294	Silver-seed gourd	carcpeB0746

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG13g05570	Cp4.1LG01g19670	Cucurbita pepo (Zucchini)	cpecpeB199

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG13g05570	Cucumber (Gy14) v1	cgycpeB0577
Cp4.1LG13g05570	Cucumber (Gy14) v1	cgycpeB0703
Cp4.1LG13g05570	Wild cucumber (PI 183967)	cpecpiB182
Cp4.1LG13g05570	Wild cucumber (PI 183967)	cpecpiB190
Cp4.1LG13g05570	Cucumber (Chinese Long) v2	cpecuB193
Cp4.1LG13g05570	Melon (DHL92) v3.5.1	cpemeB157
Cp4.1LG13g05570	Melon (DHL92) v3.6.1	cpemedB184