Cp4.1LG13g03810 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG13g03810
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	RING/FYVE/PHD zinc finger protein
Location	Cp4.1LG13 : 4006183 .. 4007370 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTCAAACCAGGTTACACAGCTTCTCCTCCATTATTCGAAATGGGGCGTATTCCAATGAGCTTCAGGTAATGCTCGTGCAACAATTCATACAATGTATGTTTGTTCTGCTTCAACTTGAGAATGATTGACCCCTATTCCATTGCAGGGGGAACTGGGAGATTTCTCGAAGGAACTTGGATAGTTCTAGCTATATAGCAATGGTTTCTTCAAACCGCAATGTTGTTGATACCGACTATGATGAGTTCTCAGATTCTGCTGCAACCAGCGTGCTATGCTGCCATTCGTTTGCTATTGTTGTAAGTTTTCTTTCTCCCTTGACACATGAAGTTCTTTCCAAACGCACAATTTTTGTAATGGTGATCATAAGATGTTTTCGAAATAACACGTGTTTAAGTTCGTGTTAGGGGAATATCAAAATCTGAACCACATGTTTCTCTTTTTCTTTGTAGTTCATGGTTCTCCTGGTTTTGAGGCACTCTCTTCCCCTCATATTCAATGAAACCGGTGGTTACTCTTTCCCTCTGCTTCTGGTGAGAAATCTCTACTTTCAAACAAATGCAAAACCAAGATTTGTGCACGAAGTTAAACTATTCCCTTTCAATGACAGTCGATTTGCCTGCGAAGTTTACTGATCTTTCTACCAATATACGTTATGTTCAAAGTAGTCTCTGCAGTTCATCGCCGTCGACTTCTCGTAAGCGTTCGTATACAATTAGCAGACATTTACATGCCATCCTCTCAGTGATAACTCTATTGTATTAATGGTTTCTTGTGTTTGGATGACTATGATCAGCTGGCTACATCTTCTAGTTCATCCATTCATTCAACCAGCATAGTTAGGAGTTCGACATCCGTATCGTCCCAACCTCAGCCTTACATTATCCGCGTTCGGTCAGTTTCATAGCAGCAGAAGGTCTGAGAAATTGGACTGCGAGCTGAAGAATGGTGTTGGTATGGGGGGGATACATGGCAGTAGGCTTTGCTTTGTGTATAGATGGGTATAGATGTTTGAAGTCGTTATGCAGTTTAGTTTATTAAATGATTGGTTTGTGTTAGAAATTCTTTGTACAGAAAAGAAATGAATGAATGATATATGCACATAATATGTAAATCTCTTACTGTTCGTTAGTTANTTTTTTTTTTTTTTTTTATTATTTCTTTTAGTCACATAAAATGTATGTCTAA

mRNA sequence

CAATTCAAACCAGGTTACACAGCTTCTCCTCCATTATTCGAAATGGGGCGTATTCCAATGAGCTTCAGGGGGAACTGGGAGATTTCTCGAAGGAACTTGGATAGTTCTAGCTATATAGCAATGGTTTCTTCAAACCGCAATGTTGTTGATACCGACTATGATGAGTTCTCAGATTCTGCTGCAACCAGCGTGCTATGCTGCCATTCGTTTGCTATTGTTTTCATGGTTCTCCTGGTTTTGAGGCACTCTCTTCCCCTCATATTCAATGAAACCGGTGGTTACTCTTTCCCTCTGCTTCTGTCGATTTGCCTGCGAAGTTTACTGATCTTTCTACCAATATACGTTATGTTCAAAGTAGTCTCTGCAGTTCATCGCCGTCGACTTCTCCTGGCTACATCTTCTAGTTCATCCATTCATTCAACCAGCATAGTTAGGAGTTCGACATCCGTATCGTCCCAACCTCAGCCTTACATTATCCGCTCACATAAAATGTATGTCTAA

Coding sequence (CDS)

CAATTCAAACCAGGTTACACAGCTTCTCCTCCATTATTCGAAATGGGGCGTATTCCAATGAGCTTCAGGGGGAACTGGGAGATTTCTCGAAGGAACTTGGATAGTTCTAGCTATATAGCAATGGTTTCTTCAAACCGCAATGTTGTTGATACCGACTATGATGAGTTCTCAGATTCTGCTGCAACCAGCGTGCTATGCTGCCATTCGTTTGCTATTGTTTTCATGGTTCTCCTGGTTTTGAGGCACTCTCTTCCCCTCATATTCAATGAAACCGGTGGTTACTCTTTCCCTCTGCTTCTGTCGATTTGCCTGCGAAGTTTACTGATCTTTCTACCAATATACGTTATGTTCAAAGTAGTCTCTGCAGTTCATCGCCGTCGACTTCTCCTGGCTACATCTTCTAGTTCATCCATTCATTCAACCAGCATAGTTAGGAGTTCGACATCCGTATCGTCCCAACCTCAGCCTTACATTATCCGCTCACATAAAATGTATGTCTAA

Protein sequence

QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSAATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVVSAVHRRRLLLATSSSSSIHSTSIVRSSTSVSSQPQPYIIRSHKMYV

Homology

[Close]

BLAST of Cp4.1LG13g03810 vs. TrEMBL
Match: A0A0A0KSZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G571450 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 7.0e-64
Identity = 132/160 (82.50%), Postives = 143/160 (89.38%), Query Frame = 1


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           Q+KPGYTA PPLFEMGRIPM+FRGNWEISRRNLD+ SYIAMVSSNRNV D+ YDEFS SA
Sbjct: 75  QYKPGYTAPPPLFEMGRIPMNFRGNWEISRRNLDNPSYIAMVSSNRNVADSGYDEFSASA 134

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
           ATSVLCCHS AI+FMVLLVLRHSLPLIFNE+G ++FPLLL+ICLR+  IFLPIYVMFKVV
Sbjct: 135 ATSVLCCHSVAIIFMVLLVLRHSLPLIFNESGSHTFPLLLTICLRTFGIFLPIYVMFKVV 194

Query: 121 SAVHRRRLLLATSSSSSIHSTSIVRSSTSVSSQPQPYIIR 161
            AVHRRRL LATS SS I S+SI RSSTS S QPQPYIIR
Sbjct: 195 FAVHRRRLFLATSPSSLISSSSIARSSTSQSPQPQPYIIR 234

[Close]

BLAST of Cp4.1LG13g03810 vs. TrEMBL
Match: A0A0B2PGT4_GLYSO (E3 ubiquitin-protein ligase MARCH2 OS=Glycine soja GN=glysoja_021283 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 5.2e-35
Identity = 78/159 (49.06%), Postives = 111/159 (69.81%), Query Frame = 1


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           QFKPGYTA PPLF+ GRIPMSFRGNWEISRR+L+S+  ++MV +++N+  ++YD++S SA
Sbjct: 110 QFKPGYTAPPPLFQFGRIPMSFRGNWEISRRDLNSTHLVSMVPTDQNLTTSNYDQYSASA 169

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
             S++CC S A++FMVLL+LRH+LPL+ +    YSFPL L +  R+  + LPIY M + V
Sbjct: 170 TGSLICCRSIAVIFMVLLILRHTLPLVISGNKEYSFPLFLLLLFRTAGVVLPIYFMVRAV 229

Query: 121 SAVHRRRLLLATSSSSSIHSTSIVRSSTSVSSQPQPYII 160
           + + R R       S+S  S+        + SQPQP++I
Sbjct: 230 ALIQRHRRQNREHLSASASSSDDESEQADLQSQPQPHVI 268

[Close]

BLAST of Cp4.1LG13g03810 vs. TrEMBL
Match: M5XD84_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009956mg PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 6.8e-35
Identity = 90/164 (54.88%), Postives = 115/164 (70.12%), Query Frame = 1


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDT--DYDEFSD 60
           QFKPGYTA PPLF+ GRIPM+FRGNWEIS+R  DS   IAMVS++R  ++T  DYDE+S 
Sbjct: 112 QFKPGYTAPPPLFQFGRIPMNFRGNWEISQR--DSPRIIAMVSTDRAFLNTNPDYDEYSA 171

Query: 61  SAATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFK 120
           S A +VLCC S A +FMVLL+LRH+LPLI N    YSFPL++ + LR+L I LPIYV+ +
Sbjct: 172 STARNVLCCRSLAFIFMVLLILRHTLPLIINGNKEYSFPLVMLLLLRTLGIVLPIYVIVR 231

Query: 121 VVSAVHRRRLLLATSSSSSIHSTSIVRSSTSVSSQPQPYIIRSH 163
            V+A+ RRR     S+SS   +     S      +PQP++IR H
Sbjct: 232 AVTAIQRRRGHQELSTSSDEETEP---SILQPELEPQPHVIRVH 270

[Close]

BLAST of Cp4.1LG13g03810 vs. TrEMBL
Match: A0A0R0ELZ6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G124800 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.2e-34
Identity = 78/160 (48.75%), Postives = 110/160 (68.75%), Query Frame = 1


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           QFKPGYTA PPLF+ GRIPMSFRGNWEISRR+L+S+  ++MV S++N+  ++YD++S SA
Sbjct: 87  QFKPGYTAPPPLFQFGRIPMSFRGNWEISRRDLNSTHLVSMVPSDQNLTTSNYDQYSASA 146

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
             S++CC S A++FMVLL+LRH+LPL+ +    YSFPL L +  R   + LPIY M + V
Sbjct: 147 TGSLICCRSIAVIFMVLLILRHTLPLVISGNKEYSFPLFLLLLFRIAGVVLPIYFMVRAV 206

Query: 121 SAVHRRRLLLATSSSSSIHSTSIVRSSTSVSSQPQPYIIR 161
           + + R R       ++S  S+        +  QPQP++IR
Sbjct: 207 ALIQRHRRQHREHLNASASSSDDESEQADLQPQPQPHVIR 246

[Close]

BLAST of Cp4.1LG13g03810 vs. TrEMBL
Match: I1NFT9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.2e-34
Identity = 78/160 (48.75%), Postives = 110/160 (68.75%), Query Frame = 1


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           QFKPGYTA PPLF+ GRIPMSFRGNWEISRR+L+S+  ++MV S++N+  ++YD++S SA
Sbjct: 90  QFKPGYTAPPPLFQFGRIPMSFRGNWEISRRDLNSTHLVSMVPSDQNLTTSNYDQYSASA 149

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
             S++CC S A++FMVLL+LRH+LPL+ +    YSFPL L +  R   + LPIY M + V
Sbjct: 150 TGSLICCRSIAVIFMVLLILRHTLPLVISGNKEYSFPLFLLLLFRIAGVVLPIYFMVRAV 209

Query: 121 SAVHRRRLLLATSSSSSIHSTSIVRSSTSVSSQPQPYIIR 161
           + + R R       ++S  S+        +  QPQP++IR
Sbjct: 210 ALIQRHRRQHREHLNASASSSDDESEQADLQPQPQPHVIR 249

[Close]

BLAST of Cp4.1LG13g03810 vs. TAIR10
Match: AT2G01275.1 (AT2G01275.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 103.2 bits (256), Expect = 1.6e-22
Identity = 65/159 (40.88%), Postives = 90/159 (56.60%), Query Frame = 1


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           +FKP YTA PPL E+G +P+ FRGNW IS+R      +I +V ++   +D  Y     S+
Sbjct: 107 EFKPDYTAPPPLLELGHVPLHFRGNWGISQRE---HRFITVVPADSTFIDQPYPL---SS 166

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
            TS +CC S  ++FM LL+LRH+LPL+   +  + FPL   + LR L I LPIYV+ K V
Sbjct: 167 TTSFICCRSLVLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAV 226

Query: 121 SAVHRRRLLLATSSSSSIHSTSIVRSSTSVSSQPQPYII 160
           +   R    L TS S     +S   + +    Q Q YII
Sbjct: 227 ATCRRHSRTLDTSPSD---DSSDEETDSWRLPQTQSYII 256

[Close]

BLAST of Cp4.1LG13g03810 vs. TAIR10
Match: AT5G38070.1 (AT5G38070.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 72.4 bits (176), Expect = 3.0e-13
Identity = 53/160 (33.12%), Postives = 84/160 (52.50%), Query Frame = 1


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           Q+KPGYTA   LF    I M+F  +W I   +L +  ++    +     D D+D +S  +
Sbjct: 102 QYKPGYTAPRQLFHYTGISMNFGSDWGIEGLDLRNPYFLTWGDA-----DDDHDLYSFHS 161

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
            TS++CC   A++F++LL LRHSLP++      +S  LL+   +R+L I L  YV FK  
Sbjct: 162 PTSLICCRLIALLFVLLLFLRHSLPVLLGGVDDFSITLLMLPLVRTLGILLIAYVFFKSF 221

Query: 121 SAVHRRRLLLAT--SSSSSIHSTSIVRSSTSVSSQPQPYI 159
             + R R    T  S  SS   T+  R   ++  +P+ ++
Sbjct: 222 IVIQRCRQERDTRLSGFSSDEETAPPRILMALPERPELHV 256

[Close]

BLAST of Cp4.1LG13g03810 vs. TAIR10
Match: AT1G14260.1 (AT1G14260.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.6e-11
Identity = 38/128 (29.69%), Postives = 66/128 (51.56%), Query Frame = 1


Query: 2   FKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSAA 61
           ++ GYT+ PP  +     +   G W IS  +LD    +A+  + R +++++YD+++ S  
Sbjct: 106 YQAGYTSPPPPPQSEETTIDIGGGWRISGLDLDDPRLLAIAEAERQILESEYDDYTASDT 165

Query: 62  TSVLCCHSFAIVFMVLLVLRHSL--PLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKV 121
           +      S A++ M LL+LRH+L  P   +        +L    LR+    LP Y+M   
Sbjct: 166 SGAAFFRSAALILMTLLLLRHALTIPDYSDSEDDDPSSILSLFLLRAASFLLPCYIMASA 225

Query: 122 VSAVHRRR 128
           +S +HRRR
Sbjct: 226 ISILHRRR 233

[Close]

BLAST of Cp4.1LG13g03810 vs. TAIR10
Match: AT5G62460.1 (AT5G62460.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.2e-09
Identity = 42/130 (32.31%), Postives = 65/130 (50.00%), Query Frame = 1


Query: 2   FKPGYTASPPLFEMGRIPMSFRGNWEIS-RRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 61
           ++PGYTA PP      I +    +W      +L+    +AM ++ R+  D DYDE++DS 
Sbjct: 127 YQPGYTAPPPPPADDTI-IDIGEDWGNGVHLDLNDPRILAMAAAERHFFDADYDEYADSN 186

Query: 62  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYS---FPLLLSICLRSLLIFLPIYVMF 121
           ++    C S A++ M LL+LRH+L L  N +               LR+    LP Y+M 
Sbjct: 187 SSGAAFCRSAALILMALLLLRHALNLTNNNSDDEEDDPSAFFFLFMLRAAGFLLPCYIMA 246

Query: 122 KVVSAVHRRR 128
             +S + RRR
Sbjct: 247 WAISILQRRR 255

[Close]

BLAST of Cp4.1LG13g03810 vs. TAIR10
Match: AT3G47550.3 (AT3G47550.3 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 49.3 bits (116), Expect = 2.7e-06
Identity = 48/165 (29.09%), Postives = 75/165 (45.45%), Query Frame = 1


Query: 2   FKPGYTASPPLFEMGRIPMSFRGNWEIS-RRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 61
           ++ GYTA PP      I +    +WE     +L     +AM ++ R+ ++ DYDE+S++ 
Sbjct: 118 YQHGYTAPPPPPPDETI-IHIGDDWENGVPLDLTDPRILAMAAAERHFLEADYDEYSENN 177

Query: 62  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSI-CLRSLLIFLPIYVMFKV 121
           ++    C S A++ M LL+LR +L L  N           S+  LR+    LP Y+M   
Sbjct: 178 SSGAAFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCYIMAWA 237

Query: 122 VSAVHRRR------LLLATSSSSSIHSTSIVRSSTSVSSQPQPYI 159
           +  + RRR       L A   +  IH     R     +  PQP I
Sbjct: 238 IGILQRRRQRQEAAALAAAEVTFMIHGGGPQRRGLHFAVAPQPPI 281

[Close]

BLAST of Cp4.1LG13g03810 vs. NCBI nr
Match: gi|659072868|ref|XP_008467137.1| (PREDICTED: uncharacterized protein LOC103504564 isoform X2 [Cucumis melo])

HSP 1 Score: 256.9 bits (655), Expect = 2.4e-65
Identity = 135/160 (84.38%), Postives = 144/160 (90.00%), Query Frame = 1


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           Q++PGYTA PPLFEMGRIPM+FRGNWEISRRNLDS SYIAMVSSNRNV D  YDEFS SA
Sbjct: 110 QYEPGYTAPPPLFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNVADPGYDEFSASA 169

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
           ATSVLCCHS AI+FMVLLVLRHSLPLIFNE+GGYSFPLLL+ICLR+  IFLP+YVMFKVV
Sbjct: 170 ATSVLCCHSVAIIFMVLLVLRHSLPLIFNESGGYSFPLLLTICLRTFGIFLPVYVMFKVV 229

Query: 121 SAVHRRRLLLATSSSSSIHSTSIVRSSTSVSSQPQPYIIR 161
            AVHRRRLLLATS SS I S+SI RSSTS S QPQPYIIR
Sbjct: 230 FAVHRRRLLLATSHSSLISSSSIARSSTSQSPQPQPYIIR 269

[Close]

BLAST of Cp4.1LG13g03810 vs. NCBI nr
Match: gi|659072866|ref|XP_008467135.1| (PREDICTED: uncharacterized protein LOC103504564 isoform X1 [Cucumis melo])

HSP 1 Score: 256.9 bits (655), Expect = 2.4e-65
Identity = 135/160 (84.38%), Postives = 144/160 (90.00%), Query Frame = 1


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           Q++PGYTA PPLFEMGRIPM+FRGNWEISRRNLDS SYIAMVSSNRNV D  YDEFS SA
Sbjct: 155 QYEPGYTAPPPLFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNVADPGYDEFSASA 214

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
           ATSVLCCHS AI+FMVLLVLRHSLPLIFNE+GGYSFPLLL+ICLR+  IFLP+YVMFKVV
Sbjct: 215 ATSVLCCHSVAIIFMVLLVLRHSLPLIFNESGGYSFPLLLTICLRTFGIFLPVYVMFKVV 274

Query: 121 SAVHRRRLLLATSSSSSIHSTSIVRSSTSVSSQPQPYIIR 161
            AVHRRRLLLATS SS I S+SI RSSTS S QPQPYIIR
Sbjct: 275 FAVHRRRLLLATSHSSLISSSSIARSSTSQSPQPQPYIIR 314

[Close]

BLAST of Cp4.1LG13g03810 vs. NCBI nr
Match: gi|449466288|ref|XP_004150858.1| (PREDICTED: uncharacterized protein LOC101213226 [Cucumis sativus])

HSP 1 Score: 251.5 bits (641), Expect = 1.0e-63
Identity = 132/160 (82.50%), Postives = 143/160 (89.38%), Query Frame = 1


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           Q+KPGYTA PPLFEMGRIPM+FRGNWEISRRNLD+ SYIAMVSSNRNV D+ YDEFS SA
Sbjct: 110 QYKPGYTAPPPLFEMGRIPMNFRGNWEISRRNLDNPSYIAMVSSNRNVADSGYDEFSASA 169

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
           ATSVLCCHS AI+FMVLLVLRHSLPLIFNE+G ++FPLLL+ICLR+  IFLPIYVMFKVV
Sbjct: 170 ATSVLCCHSVAIIFMVLLVLRHSLPLIFNESGSHTFPLLLTICLRTFGIFLPIYVMFKVV 229

Query: 121 SAVHRRRLLLATSSSSSIHSTSIVRSSTSVSSQPQPYIIR 161
            AVHRRRL LATS SS I S+SI RSSTS S QPQPYIIR
Sbjct: 230 FAVHRRRLFLATSPSSLISSSSIARSSTSQSPQPQPYIIR 269

[Close]

BLAST of Cp4.1LG13g03810 vs. NCBI nr
Match: gi|700196325|gb|KGN51502.1| (hypothetical protein Csa_5G571450 [Cucumis sativus])

HSP 1 Score: 251.5 bits (641), Expect = 1.0e-63
Identity = 132/160 (82.50%), Postives = 143/160 (89.38%), Query Frame = 1


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           Q+KPGYTA PPLFEMGRIPM+FRGNWEISRRNLD+ SYIAMVSSNRNV D+ YDEFS SA
Sbjct: 75  QYKPGYTAPPPLFEMGRIPMNFRGNWEISRRNLDNPSYIAMVSSNRNVADSGYDEFSASA 134

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
           ATSVLCCHS AI+FMVLLVLRHSLPLIFNE+G ++FPLLL+ICLR+  IFLPIYVMFKVV
Sbjct: 135 ATSVLCCHSVAIIFMVLLVLRHSLPLIFNESGSHTFPLLLTICLRTFGIFLPIYVMFKVV 194

Query: 121 SAVHRRRLLLATSSSSSIHSTSIVRSSTSVSSQPQPYIIR 161
            AVHRRRL LATS SS I S+SI RSSTS S QPQPYIIR
Sbjct: 195 FAVHRRRLFLATSPSSLISSSSIARSSTSQSPQPQPYIIR 234

[Close]

BLAST of Cp4.1LG13g03810 vs. NCBI nr
Match: gi|734330523|gb|KHN06737.1| (E3 ubiquitin-protein ligase MARCH2 [Glycine soja])

HSP 1 Score: 155.6 bits (392), Expect = 7.5e-35
Identity = 78/159 (49.06%), Postives = 111/159 (69.81%), Query Frame = 1


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           QFKPGYTA PPLF+ GRIPMSFRGNWEISRR+L+S+  ++MV +++N+  ++YD++S SA
Sbjct: 110 QFKPGYTAPPPLFQFGRIPMSFRGNWEISRRDLNSTHLVSMVPTDQNLTTSNYDQYSASA 169

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
             S++CC S A++FMVLL+LRH+LPL+ +    YSFPL L +  R+  + LPIY M + V
Sbjct: 170 TGSLICCRSIAVIFMVLLILRHTLPLVISGNKEYSFPLFLLLLFRTAGVVLPIYFMVRAV 229

Query: 121 SAVHRRRLLLATSSSSSIHSTSIVRSSTSVSSQPQPYII 160
           + + R R       S+S  S+        + SQPQP++I
Sbjct: 230 ALIQRHRRQNREHLSASASSSDDESEQADLQSQPQPHVI 268

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g03810 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG13g03810 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSZ3_CUCSA	7.0e-64	82.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G571450 PE=4 SV=1	[more]
A0A0B2PGT4_GLYSO	5.2e-35	49.06	E3 ubiquitin-protein ligase MARCH2 OS=Glycine soja GN=glysoja_021283 PE=4 SV=1	[more]
M5XD84_PRUPE	6.8e-35	54.88	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009956mg PE=4 SV=1	[more]
A0A0R0ELZ6_SOYBN	1.2e-34	48.75	Uncharacterized protein OS=Glycine max GN=GLYMA_20G124800 PE=4 SV=1	[more]
I1NFT9_SOYBN	1.2e-34	48.75	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]

BLAST of Cp4.1LG13g03810 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01275.1	1.6e-22	40.88	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G38070.1	3.0e-13	33.13	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G14260.1	1.6e-11	29.69	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G62460.1	1.2e-09	32.31	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT3G47550.3	2.7e-06	29.09	RING/FYVE/PHD zinc finger superfamily protein	[more]

BLAST of Cp4.1LG13g03810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072868\|ref\|XP_008467137.1\|	2.4e-65	84.38	PREDICTED: uncharacterized protein LOC103504564 isoform X2 [Cucumis melo]	[more]
gi\|659072866\|ref\|XP_008467135.1\|	2.4e-65	84.38	PREDICTED: uncharacterized protein LOC103504564 isoform X1 [Cucumis melo]	[more]
gi\|449466288\|ref\|XP_004150858.1\|	1.0e-63	82.50	PREDICTED: uncharacterized protein LOC101213226 [Cucumis sativus]	[more]
gi\|700196325\|gb\|KGN51502.1\|	1.0e-63	82.50	hypothetical protein Csa_5G571450 [Cucumis sativus]	[more]
gi\|734330523\|gb\|KHN06737.1\|	7.5e-35	49.06	E3 ubiquitin-protein ligase MARCH2 [Glycine soja]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR022143	DUF3675

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g03810.1	Cp4.1LG13g03810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 4..119 score: 1.1
None	No IPR available	PANTHER	PTHR23012:SF89	SUBFAMILY NOT NAMED	coord: 1..127 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG13g03810	Cucsa.280410	Cucumber (Gy14) v1	cgycpeB0735
Cp4.1LG13g03810	CmaCh15G009530	Cucurbita maxima (Rimu)	cmacpeB305
Cp4.1LG13g03810	CmaCh04G020990	Cucurbita maxima (Rimu)	cmacpeB710
Cp4.1LG13g03810	CmoCh04G022020	Cucurbita moschata (Rifu)	cmocpeB663
Cp4.1LG13g03810	CmoCh15G009930	Cucurbita moschata (Rifu)	cmocpeB268
Cp4.1LG13g03810	Cla003921	Watermelon (97103) v1	cpewmB188
Cp4.1LG13g03810	Csa5G571450	Cucumber (Chinese Long) v2	cpecuB177
Cp4.1LG13g03810	MELO3C005309	Melon (DHL92) v3.5.1	cpemeB149
Cp4.1LG13g03810	ClCG01G006180	Watermelon (Charleston Gray)	cpewcgB169
Cp4.1LG13g03810	CSPI05G19650	Wild cucumber (PI 183967)	cpecpiB179
Cp4.1LG13g03810	Lsi09G006550	Bottle gourd (USVL1VR-Ls)	cpelsiB135
Cp4.1LG13g03810	MELO3C005309.2	Melon (DHL92) v3.6.1	cpemedB176
Cp4.1LG13g03810	CsaV3_5G028480	Cucumber (Chinese Long) v3	cpecucB0212
Cp4.1LG13g03810	Bhi12G000778	Wax gourd	cpewgoB0227
Cp4.1LG13g03810	CsGy5G019140	Cucumber (Gy14) v2	cgybcpeB600
Cp4.1LG13g03810	Carg26346	Silver-seed gourd	carcpeB0274

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG13g03810	Melon (DHL92) v3.6.1	cpemedB187
Cp4.1LG13g03810	Silver-seed gourd	carcpeB1175
Cp4.1LG13g03810	Silver-seed gourd	carcpeB1465
Cp4.1LG13g03810	Cucumber (Chinese Long) v3	cpecucB0228