Cp4.1LG13g03070 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTTCCTCGTTTTTGCAGGAAATGTTGCTTCTTTGCTGCTTTATACCGTGCCCATGTAATCAAATTTTTCCAGCTTTCCTTTCTTCTTATTATTAATTCATCGTCTTTCAACAATTGTGTTCTAAGATGGGTTGTAGAAATGTTGTGGGATTTCATGTCGATTGGAGAGAGGAATGAGTATCAACAGGATATTGGGTTTTGAAGGAGGATTATGAGATCCCATATCGATTGAAGAGAGGCTCGAGTGCCAGTAAGGATGCTGGGACCTGAAATGAGGTGGATTGTGAGATCCCATATTGGTTGGAAAAGAAAACCAAACATTCTTTATAAGGGTGTGTAAACCTCTCCCTAGCCGACGCGTTTTAAAAACTTGTCAACTTCTCCCTACTCGATAGTTATATGCAGTAAGCTGTTTGTTGTTGCATTTTGCTTACATTCCCATACAACACCAATTTTAATTTCTCAAATCTTACTTTCAAAACTCTCTTTCGCAATCTCTCTGCTCCCGTTTTCTAAAACTTTCTTTTTGAACTGGGGCCAGAGGCTCGAGCATACGTCGCTTGGCCGTAGGCGACCCAAGAACGAATACGCTTAACTCACTTGTTGCTGAGAAGTGAGTGCCGCACAATCGCATGAGGGATAACTCAAAAGGGAAAACTCAAATAAGATAATATTTGCTAGTAGTGAGCTTGAGCTACCACGAACCAATTCCAAGTGGGATGAGAAATCCCTGTTTAAACGAGAAATGGGGAGCAGGGAATTGGAGTAATGTTATCGTTTTTACAAATCATTCGATCACAATTTCGAAAAAAAAAACGAACCTCGATTTTTAAATTTTGAAATTGTATTGTGTATATGTAGATTGACATTTTGGAGGGTTATAAAGAAGAAGAGCACAGAGGAGTTTTCATGTGTTCCATACATGGTTGCCCTAATGAACTGTCTTCTTTACACTTGGTATGGTTTACCAGTTGTAAGCAAAGGATGGGAGAACTTCCCTGTTGTCACCATTAATGGCCTCGGAATCCTTCTCGAGTTCTCCTTCATCTTCGTCTACTTCTCGTTTGCCTCGTCTCGAGCAAAGGCAAGTTCGCCAACCCACTCCCTTTTTACATCCCGTTTCATAAACATTTTACTTTTTCGTTTTATCCAAACATGTCATTCATTTGTTCGAGATTTATTTCTTTTTTCTTTTCGGCATCCACGCATGCCAAAGATATGCTTTTAGTGCCTACGTTTGAGTTTATTTTTATTCTTATTCGGTCTCTCGTGTTTTATAATTTTTATTTAGTTATTGTTCTTATCCTTAGATTAGCTTTATATATGGACAGAAACAGTCTATCATCAATCGAAAAATTTAATATACATTATCCTTTTTAAAATTTGAATAAAAGATAATTGAAAGCAAAAGATTCAAAAACTTTTTAATTGATTCCTTACCCCAATATCTATAGGTATTTGACAAGTCTCTTTCACGTCTCTATATTACATCTTTTCAAATCATTATCAAAATCACGATTTTCGATATTCTAAAGACATAACGTGAATGGAATAATGAATATCATGTTAAGTGATCGATCGACCCCGAATAATAATAATGTATAATTTGTGGTAAAAGATTTGAAAATAATGTGTGCAGAAGAAGGTGGTTTTGGGATTGGTGGGAGTTCTTACGGTGTTCTTCTGTGTGGGAATGATCTCTGCTTTTGTTCTTCATACTCATCATCTTCGTAAGCTCTTTGTGGGATGCATTGGCCTTGTTGCTTCTGTGGCCATGTATGCCTCTCCATTGGTAGCCATGGTAAGCTAGCGCTCGTTCGGTCGTGTTCTCGTTTTTAGTTCTCTAAACGTTTATATTTAAATTAAACTTTTGTTCGTTCGGTGATGAACAAAAGTTTAGTTCATTACAAATGATCTTCTTTCTATGTCTTGTAGAATCAAGTGTTAAAGACGAAGAGTGTCGAGTTTATGCCATTTTATTTGTCGTTATTTTCGTTCTTTGCAAGTTCCTTATGGCTGGCTTACGGACTCCTTAGCCATGATATCTTCCTTGCGGTTCGTTCTCGCTAAAACCCTTTTTGATAACTATTAAGTATTTTGTTTTGAAAATTAAGTTCATAAACGTACTTTTAACTATAATTTTCGAGACGATTAATGGGTTGAATTATAAATTTAACTCAATTTAATGATTTGAATTATAAATTTTTTAACTCGAATAACCAATCCAACCCAACTATAAATTTTTTAGGTTGGAATGGTTAAAGTTGGTCGGGTCATTTATCCAATCTTTTTTAATAAAAGTAAAATGTTAATTCGTAAAACATTTATTTACTTATTTTTTCAAACATTTAATTAAAATGTACCGTTCTAATTTTAAAGAAAGTCATGAGTCAACAACGATTCCGTTCCAAATTAACATGTGAAAGTTTGAATTAAATAATTTGCAGTCTCCAAATCTAGTGGGAAGCCCATTGGGATTGCTTCAACTTGTGCTGTATTGCATCTATAGGAACAAGGAACATGATCAACAAGAAGCTGTGAAGAAGGAGAAAGAAGGTTGTGTAGAGCCTATGCCCAATTGGGACATCCAAAAGAACAATAATCAACATCAAATTCCACACCAAAATAGCTCCCAAGTTTAG ATGAGAAATGTTGCTTCTTTGCTGCTTTATACCGTGCCCATATTGACATTTTGGAGGGTTATAAAGAAGAAGAGCACAGAGGAGTTTTCATGTGTTCCATACATGGTTGCCCTAATGAACTGTCTTCTTTACACTTGGTATGGTTTACCAGTTGTAAGCAAAGGATGGGAGAACTTCCCTGTTGTCACCATTAATGGCCTCGGAATCCTTCTCGAGTTCTCCTTCATCTTCAAGAAGGTGGTTTTGGGATTGGTGGGAGTTCTTACGGTGTTCTTCTGTGTGGGAATGATCTCTGCTTTTGTTCTTCATACTCATCATCTTCGTAAGCTCTTTGTGGGATGCATTGGCCTTGTTGCTTCTGTGGCCATGTATGCCTCTCCATTGGTAGCCATGAATCAAGTGTTAAAGACGAAGAGTGTCGAGTTTATGCCATTTTATTTGTCGTTATTTTCGTTCTTTGCAAGTTCCTTATGGCTGGCTTACGGACTCCTTAGCCATGATATCTTCCTTGCGTCTCCAAATCTAGTGGGAAGCCCATTGGGATTGCTTCAACTTGTGCTGTATTGCATCTATAGGAACAAGGAACATGATCAACAAGAAGCTGTGAAGAAGGAGAAAGAAGGTTGTGTAGAGCCTATGCCCAATTGGGACATCCAAAAGAACAATAATCAACATCAAATTCCACACCAAAATAGCTCCCAAGTTTAG ATGAGAAATGTTGCTTCTTTGCTGCTTTATACCGTGCCCATATTGACATTTTGGAGGGTTATAAAGAAGAAGAGCACAGAGGAGTTTTCATGTGTTCCATACATGGTTGCCCTAATGAACTGTCTTCTTTACACTTGGTATGGTTTACCAGTTGTAAGCAAAGGATGGGAGAACTTCCCTGTTGTCACCATTAATGGCCTCGGAATCCTTCTCGAGTTCTCCTTCATCTTCAAGAAGGTGGTTTTGGGATTGGTGGGAGTTCTTACGGTGTTCTTCTGTGTGGGAATGATCTCTGCTTTTGTTCTTCATACTCATCATCTTCGTAAGCTCTTTGTGGGATGCATTGGCCTTGTTGCTTCTGTGGCCATGTATGCCTCTCCATTGGTAGCCATGAATCAAGTGTTAAAGACGAAGAGTGTCGAGTTTATGCCATTTTATTTGTCGTTATTTTCGTTCTTTGCAAGTTCCTTATGGCTGGCTTACGGACTCCTTAGCCATGATATCTTCCTTGCGTCTCCAAATCTAGTGGGAAGCCCATTGGGATTGCTTCAACTTGTGCTGTATTGCATCTATAGGAACAAGGAACATGATCAACAAGAAGCTGTGAAGAAGGAGAAAGAAGGTTGTGTAGAGCCTATGCCCAATTGGGACATCCAAAAGAACAATAATCAACATCAAATTCCACACCAAAATAGCTCCCAAGTTTAG MRNVASLLLYTVPILTFWRVIKKKSTEEFSCVPYMVALMNCLLYTWYGLPVVSKGWENFPVVTINGLGILLEFSFIFKKVVLGLVGVLTVFFCVGMISAFVLHTHHLRKLFVGCIGLVASVAMYASPLVAMNQVLKTKSVEFMPFYLSLFSFFASSLWLAYGLLSHDIFLASPNLVGSPLGLLQLVLYCIYRNKEHDQQEAVKKEKEGCVEPMPNWDIQKNNNQHQIPHQNSSQV
BLAST of Cp4.1LG13g03070 vs. Swiss-Prot
Match: SWT3B_ORYSJ (Bidirectional sugar transporter SWEET3b OS=Oryza sativa subsp. japonica GN=SWEET3B PE=3 SV=2) HSP 1 Score: 253.4 bits (646), Expect = 2.3e-66 Identity = 135/209 (64.59%), Postives = 159/209 (76.08%), Query Frame = 1
BLAST of Cp4.1LG13g03070 vs. Swiss-Prot
Match: SWET3_ARATH (Bidirectional sugar transporter SWEET3 OS=Arabidopsis thaliana GN=SWEET3 PE=1 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 1.1e-63 Identity = 129/204 (63.24%), Postives = 156/204 (76.47%), Query Frame = 1
BLAST of Cp4.1LG13g03070 vs. Swiss-Prot
Match: SWT3A_ORYSJ (Bidirectional sugar transporter SWEET3a OS=Oryza sativa subsp. japonica GN=SWEET3A PE=3 SV=2) HSP 1 Score: 224.9 bits (572), Expect = 8.9e-58 Identity = 112/200 (56.00%), Postives = 150/200 (75.00%), Query Frame = 1
BLAST of Cp4.1LG13g03070 vs. Swiss-Prot
Match: SWT1A_ORYSJ (Bidirectional sugar transporter SWEET1a OS=Oryza sativa subsp. japonica GN=SWEET1A PE=2 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 5.3e-42 Identity = 100/202 (49.50%), Postives = 129/202 (63.86%), Query Frame = 1
BLAST of Cp4.1LG13g03070 vs. Swiss-Prot
Match: SWT1B_ORYSI (Bidirectional sugar transporter SWEET1b OS=Oryza sativa subsp. indica GN=SWEET1B PE=3 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 2.2e-40 Identity = 100/205 (48.78%), Postives = 125/205 (60.98%), Query Frame = 1
BLAST of Cp4.1LG13g03070 vs. TrEMBL
Match: A0A0A0KNA4_CUCSA (Bidirectional sugar transporter SWEET OS=Cucumis sativus GN=Csa_5G139600 PE=3 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 4.1e-102 Identity = 197/245 (80.41%), Postives = 215/245 (87.76%), Query Frame = 1
BLAST of Cp4.1LG13g03070 vs. TrEMBL
Match: A0A059DFJ7_EUCGR (Bidirectional sugar transporter SWEET OS=Eucalyptus grandis GN=EUGRSUZ_A01497 PE=3 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 1.4e-73 Identity = 149/235 (63.40%), Postives = 176/235 (74.89%), Query Frame = 1
BLAST of Cp4.1LG13g03070 vs. TrEMBL
Match: E0CUJ5_VITVI (Bidirectional sugar transporter SWEET OS=Vitis vinifera GN=VIT_16s0050g02540 PE=3 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 1.2e-72 Identity = 152/235 (64.68%), Postives = 174/235 (74.04%), Query Frame = 1
BLAST of Cp4.1LG13g03070 vs. TrEMBL
Match: B9I542_POPTR (Bidirectional sugar transporter SWEET OS=Populus trichocarpa GN=POPTR_0012s01400g PE=3 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 2.9e-71 Identity = 145/241 (60.17%), Postives = 174/241 (72.20%), Query Frame = 1
BLAST of Cp4.1LG13g03070 vs. TrEMBL
Match: A0A022QC46_ERYGU (Bidirectional sugar transporter SWEET OS=Erythranthe guttata GN=MIMGU_mgv1a021292mg PE=3 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 1.9e-70 Identity = 147/236 (62.29%), Postives = 176/236 (74.58%), Query Frame = 1
BLAST of Cp4.1LG13g03070 vs. TAIR10
Match: AT5G53190.1 (AT5G53190.1 Nodulin MtN3 family protein) HSP 1 Score: 244.6 bits (623), Expect = 6.1e-65 Identity = 129/204 (63.24%), Postives = 156/204 (76.47%), Query Frame = 1
BLAST of Cp4.1LG13g03070 vs. TAIR10
Match: AT1G21460.1 (AT1G21460.1 Nodulin MtN3 family protein) HSP 1 Score: 166.0 bits (419), Expect = 2.8e-41 Identity = 104/216 (48.15%), Postives = 130/216 (60.19%), Query Frame = 1
BLAST of Cp4.1LG13g03070 vs. TAIR10
Match: AT3G14770.1 (AT3G14770.1 Nodulin MtN3 family protein) HSP 1 Score: 139.4 bits (350), Expect = 2.8e-33 Identity = 84/207 (40.58%), Postives = 128/207 (61.84%), Query Frame = 1
BLAST of Cp4.1LG13g03070 vs. TAIR10
Match: AT4G10850.1 (AT4G10850.1 Nodulin MtN3 family protein) HSP 1 Score: 138.7 bits (348), Expect = 4.7e-33 Identity = 82/201 (40.80%), Postives = 116/201 (57.71%), Query Frame = 1
BLAST of Cp4.1LG13g03070 vs. TAIR10
Match: AT4G15920.1 (AT4G15920.1 Nodulin MtN3 family protein) HSP 1 Score: 136.7 bits (343), Expect = 1.8e-32 Identity = 86/231 (37.23%), Postives = 130/231 (56.28%), Query Frame = 1
BLAST of Cp4.1LG13g03070 vs. NCBI nr
Match: gi|778698935|ref|XP_011654626.1| (PREDICTED: bidirectional sugar transporter SWEET3b isoform X1 [Cucumis sativus]) HSP 1 Score: 379.0 bits (972), Expect = 5.9e-102 Identity = 197/245 (80.41%), Postives = 215/245 (87.76%), Query Frame = 1
BLAST of Cp4.1LG13g03070 vs. NCBI nr
Match: gi|659074681|ref|XP_008437737.1| (PREDICTED: bidirectional sugar transporter SWEET3b, partial [Cucumis melo]) HSP 1 Score: 355.1 bits (910), Expect = 9.2e-95 Identity = 186/233 (79.83%), Postives = 201/233 (86.27%), Query Frame = 1
BLAST of Cp4.1LG13g03070 vs. NCBI nr
Match: gi|778698938|ref|XP_011654627.1| (PREDICTED: bidirectional sugar transporter SWEET3b isoform X2 [Cucumis sativus]) HSP 1 Score: 313.2 bits (801), Expect = 4.0e-82 Identity = 163/209 (77.99%), Postives = 180/209 (86.12%), Query Frame = 1
BLAST of Cp4.1LG13g03070 vs. NCBI nr
Match: gi|629124761|gb|KCW89186.1| (hypothetical protein EUGRSUZ_A01497 [Eucalyptus grandis]) HSP 1 Score: 284.3 bits (726), Expect = 2.0e-73 Identity = 149/235 (63.40%), Postives = 176/235 (74.89%), Query Frame = 1
BLAST of Cp4.1LG13g03070 vs. NCBI nr
Match: gi|702243148|ref|XP_010049431.1| (PREDICTED: bidirectional sugar transporter SWEET3 [Eucalyptus grandis]) HSP 1 Score: 284.3 bits (726), Expect = 2.0e-73 Identity = 149/235 (63.40%), Postives = 176/235 (74.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|