Cp4.1LG13g01380 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATACGCAACCCCCGCCTAAGAGCTCAAATCCCTTTAAAACCACTTTCTGTTCCTTTCCAATTTCTTCTCGACTCGATCCTCGATCCTCAATCCAATCCGAAGCTCGCCGGCGTGCGCTCATGTCGACGGGGATCTCGGCCGTTGCAACCGCGGCGCCGTACCGGAGNGATCCTCAATCCAATCCGAAGCTCGCCGGCGTGCGCTCATGGCGACGGGGATCTCGGCCGTTGCAACCGCGGCGCCGTACCGGAGATTAATTCAACGACCGGCGAAAGCTCCACCTCCGGCGAACCGTGTTCCATGGCGGTGCTTTGCAAAACAGAGCACGAGAAGATTGTCGATGGTGAAGAAGAAAAGTGGCGCGAGTGAAGTTGAAATGGTTAGGGATTTGAAGGTAATCGTGGAGGAGAAAATGGGGAGGAAGAAAGCGGAAAGAGATGCTTATCTTGTCGCTGCAATTGTGTCGAGCTTCGNAGTGAGTGAAGTTGAAATGGTTAAGGATTTGAAGGTAATCGTGGAGGAGAAAATGGGGAGGAAGAAAGCAGAAAGAGATGCTTATCTTGTCGCTGCAATTGTGTCGAGCTTCGGGATCACGTCCATGGCCGCCATCGCTGTCTATTACAGATTCTCCTGGCAACTCAAGGTATTTTTCCCCTCCCCTTTTTCTTTTACCAATTTTCTTAACACCTTTATTCCTCTCTTCCAGTTAACGATTGAGAAATAGAATTGCGAACACATAACTCTCCACAATGGTATGATATTGTCCTATCAACCCATGATCATTCTAGGCTTGTAGGACTCCATCCGACCCCTTATTCCATGATCATTCCCTAAATTAGCTGACGTGAGACTTCCATCATCCAACATTCATAACCTTTAAATAGGATATCTATAAACTAATCAAATANCGACCCCTTATTCCATGATCATTCCCTAAATTAGCTGACGTGAAACTTCCATCATCCAACATTCATAACCTTTAAATAGGATATCTATAAACTAATCAAATATACTACTATTCAAATTCCAGAAGAATATTAATTGATTATGAATGTGTAAGATATATTATATAACTAATTATTATAACATTTGGAGCTTATTTAAATCTCGGTTTATTTAAATTTTGATTAATAAATTTTAATTTATAAGGAAATTATTGAAAATAATTCAGAATTACATTTGATTTACAGGGTGGAGATTTTCCAGTTTTGGAAATGTTTGGTACTTTTGCACTATCTGTTGGAGCTGCTGTAAGTTGAAGCTTATAAAATTATGGTTACATTAATAAAAATATTTAATCTCCTTTTAAAAAGTTTCATTAATACTTTTTAAAAAATATCATTTGTTATTATATTTAAAAAAATATTCATAAAATTTTAAAAATAACATTAAAAAATTTAGAAATTATAAGGTATTTTTTAAACTATATTTTTTAATATTTTTATAAGGATATTATTAAAATTTTTGAAAATTTAATAGTTTTTTTTAGGTAAATTATCTAAATATAAAGATATTTTTTTATTAATTTAACTTAAAAAAAGTATTTAAATATTTTTTGAAATGACTTAAAAAAATAATTTTAAATACTTAAAAATTATCTAAAATAATTTTTTTTAGGTGGGGATGGAATTTTGGGCTAGATGGGCACATAAACAACTGTGGCATGATACGCTATGGAATATGCACAAGGTAATAGCGCGTTACATTTAAATGTGTGAACTTTCAATCTTAGTTTAATTTGGTTGATCTATTTTTAAAAATAAATTATTTTTTTTTTTCATATATTTTGTGTTAAAATTTTGTAAATGATTCAAACTAAACATTTTGATATGAACGGGTGAGGCTAGTCTCATCACAGGGCGAGGGATGGACCGTTTGAATTGAACGATGTGTTTGCAATCATCAACGCGGTGCCTGCCATTGCTCTTCTTTCTTTTGGCTTCTTCAATCAAGGCTTCTTCCCCGGTCTATGTTTTGGTGCTGTATGTCTCATCATTAATTTCTACGACATTATTTGAATTTTTTTTTTTTTTTTTTTTTTAAATAATAAAATAATTAATTTGTAAAATGGTCAAAACTGTCGAAGTCCAGGTCAGCTTTGTATGACGTGTCATATTCTGATTCGGCAGGGTTTGGGAATTACGGTGTTTGGAATGGCCTACATGTTCGTCCACGATGGCCTCGTGCACCGTCGTTTCCCTGTGGGTCCCATAGCTGCTGTCCCCTACTTACGACGTGTCGCTGCTGCCCATCATGTAAGTAATTCCCGACATGTCGTTTGTTTTTTTGGGAGTTAATTTTAATTTTTAATTTTTTTTGTTGCAGATCCATCATACGGACAAATTCGACGGCGTCCCGTACGGGTTGTTTTTAGGACCCAAGGTTAGTTCCGTCATTTCACTCACTAATTTTTTTTTAATTGAATAAAAACGACGTCGTTTGGATTGCTGCAGGAACTGGAAGACGTGGATGGCGAGGAAGAGCTGCAGAAAGAAATTAAAAAGAGAAGCAAAGTTTACAGAAATTAAATTAAATTTTCTCATTATATTAATAATAATCAACAATAGGTGGTTATTTATTTATTTTTTAAAATCTTTATCTTCGTGTAATTATTTTTATTAACACGGATGCTCGGTTAAGCTATAAATTTAATTTATTATGTATCAAATCTTCAATCCGTTCTAAAAAATTGTTTAATGAATGTATTCTCATATGTTCTTAAATTTTCAAAATTATATGTTATATAAAAACCTTAATAGTCGAAAAATATAATTAAATTTTAAAGTAACATATANGAATTTTCAAAATTATATGTTATATAAAAATCTTAATAGTCGAAAAATATAATTAAATTTTAAAGTAACATATAAAGCTGTGAGGTTGTGCTTATATATATTTGGTCTCGAT ATACGCAACCCCCGCCTAAGAGCTCAAATCCCTTTAAAACCACTTTCTGTTCCTTTCCAATTTCTTCTCGACTCGATCCTCGATCCTCAATCCAATCCGAAGCTCGCCGGCGTGCGCTCATGTCGACGGGGATCTCGGCCGTTGCAACCGCGGCGCCGTACCGGAGNGATCCTCAATCCAATCCGAAGCTCGCCGGCGTGCGCTCATGGCGACGGGGATCTCGGCCGTTGCAACCGCGGCGCCGTACCGGAGATTAATTCAACGACCGGCGAAAGCTCCACCTCCGGCGAACCGTGTTCCATGGCGGTGCTTTGCAAAACAGAGCACGAGAAGATTGTCGATGGTGAAGAAGAAAAGTGGCGCGAGTGAAGTTGAAATGGTTAGGGATTTGAAGGTAATCGTGGAGGAGAAAATGGGGAGGAAGAAAGCGGAAAGAGATGCTTATCTTGTCGCTGCAATTGTGTCGAGCTTCGNAGTGAGTGAAGTTGAAATGGTTAAGGATTTGAAGGTAATCGTGGAGGAGAAAATGGGGAGGAAGAAAGCAGAAAGAGATGCTTATCTTGTCGCTGCAATTGTGTCGAGCTTCGGGATCACGTCCATGGCCGCCATCGCTGTCTATTACAGATTCTCCTGGCAACTCAAGGGTGGAGATTTTCCAGTTTTGGAAATGTTTGGTACTTTTGCACTATCTGTTGGAGCTGCTGTGGGGATGGAATTTTGGGCTAGATGGGCACATAAACAACTGTGGCATGATACGCTATGGAATATGCACAAGTCTCATCACAGGGCGAGGGATGGACCGTTTGAATTGAACGATGTGTTTGCAATCATCAACGCGGTGCCTGCCATTGCTCTTCTTTCTTTTGGCTTCTTCAATCAAGGCTTCTTCCCCGGTCTATGTTTTGGTGCTGGTTTGGGAATTACGGTGTTTGGAATGGCCTACATGTTCGTCCACGATGGCCTCGTGCACCGTCGTTTCCCTGTGGGTCCCATAGCTGCTGTCCCCTACTTACGACGTGTCGCTGCTGCCCATCATATCCATCATACGGACAAATTCGACGGCGTCCCGTACGGGTTGTTTTTAGGACCCAAGGAACTGGAAGACGTGGATGGCGAGGAAGAGCTGCAGAAAGAAATTAAAAAGAGAAGCAAAGTTTACAGAAATTAAATTAAATTTTCTCATTATATTAATAATAATCAACAATAGGTGGTTATTTATTTATTTTTTAAAATCTTTATCTTCGTGTAATTATTTTTATTAACACGGATGCTCGGTTAAGCTATAAATTTAATTTATTATGTATCAAATCTTCAATCCGTTCTAAAAAATTGTTTAATGAATGTATTCTCATATGTTCTTAAATTTTCAAAATTATATGTTATATAAAAACCTTAATAGTCGAAAAATATAATTAAATTTTAAAGTAACATATANGAATTTTCAAAATTATATGTTATATAAAAATCTTAATAGTCGAAAAATATAATTAAATTTTAAAGTAACATATAAAGCTGTGAGGTTGTGCTTATATATATTTGGTCTCGAT ATGGCGACGGGGATCTCGGCCGTTGCAACCGCGGCGCCGTACCGGAGATTAATTCAACGACCGGCGAAAGCTCCACCTCCGGCGAACCGTGTTCCATGGCGGTGCTTTGCAAAACAGAGCACGAGAAGATTGTCGATGGTGAAGAAGAAAAGTGGCGCGAGTGAAGTTGAAATGGTTAGGGATTTGAAGGTAATCGTGGAGGAGAAAATGGGGAGGAAGAAAGCGGAAAGAGATGCTTATCTTGTCGCTGCAATTGTGTCGAGCTTCGNAGTGAGTGAAGTTGAAATGGTTAAGGATTTGAAGGTAATCGTGGAGGAGAAAATGGGGAGGAAGAAAGCAGAAAGAGATGCTTATCTTGTCGCTGCAATTGTGTCGAGCTTCGGGATCACGTCCATGGCCGCCATCGCTGTCTATTACAGATTCTCCTGGCAACTCAAGGGTGGAGATTTTCCAGTTTTGGAAATGTTTGGTACTTTTGCACTATCTGTTGGAGCTGCTGTGGGGATGGAATTTTGGGCTAGATGGGCACATAAACAACTGTGGCATGATACGCTATGGAATATGCACAAGTCTCATCACAGGGCGAGGGATGGACCGTTTGAATTGAACGATGTGTTTGCAATCATCAACGCGGTGCCTGCCATTGCTCTTCTTTCTTTTGGCTTCTTCAATCAAGGCTTCTTCCCCGGTCTATGTTTTGGTGCTGGTTTGGGAATTACGGTGTTTGGAATGGCCTACATGTTCGTCCACGATGGCCTCGTGCACCGTCGTTTCCCTGTGGGTCCCATAGCTGCTGTCCCCTACTTACGACGTGTCGCTGCTGCCCATCATATCCATCATACGGACAAATTCGACGGCGTCCCGTACGGGTTGTTTTTAGGACCCAAGGAACTGGAAGACGTGGATGGCGAGGAAGAGCTGCAGAAAGAAATTAAAAAGAGAAGCAAAGTTTACAGAAATTAA MATGISAVATAAPYRRLIQRPAKAPPPANRVPWRCFAKQSTRRLSMVKKKSGASEVEMVRDLKVIVEEKMGRKKAERDAYLVAAIVSSFXVSEVEMVKDLKVIVEEKMGRKKAERDAYLVAAIVSSFGITSMAAIAVYYRFSWQLKGGDFPVLEMFGTFALSVGAAVGMEFWARWAHKQLWHDTLWNMHKSHHRARDGPFELNDVFAIINAVPAIALLSFGFFNQGFFPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIAAVPYLRRVAAAHHIHHTDKFDGVPYGLFLGPKELEDVDGEEELQKEIKKRSKVYRN
BLAST of Cp4.1LG13g01380 vs. Swiss-Prot
Match: BCH1_ARATH (Beta-carotene 3-hydroxylase 1, chloroplastic OS=Arabidopsis thaliana GN=BETA-OHASE 1 PE=1 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 1.1e-98 Identity = 187/289 (64.71%), Postives = 222/289 (76.82%), Query Frame = 1
BLAST of Cp4.1LG13g01380 vs. Swiss-Prot
Match: BCH2_ARATH (Beta-carotene 3-hydroxylase 2, chloroplastic OS=Arabidopsis thaliana GN=BETA-OHASE 2 PE=2 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 4.6e-97 Identity = 165/213 (77.46%), Postives = 191/213 (89.67%), Query Frame = 1
BLAST of Cp4.1LG13g01380 vs. Swiss-Prot
Match: BCH2_CAPAN (Beta-carotene hydroxylase 2, chloroplastic (Fragment) OS=Capsicum annuum GN=CA2 PE=2 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 1.3e-96 Identity = 163/211 (77.25%), Postives = 192/211 (91.00%), Query Frame = 1
BLAST of Cp4.1LG13g01380 vs. Swiss-Prot
Match: BCH_GENLU (Beta-carotene 3-hydroxylase, chloroplastic OS=Gentiana lutea GN=BHY PE=2 SV=1) HSP 1 Score: 349.0 bits (894), Expect = 5.6e-95 Identity = 172/257 (66.93%), Postives = 208/257 (80.93%), Query Frame = 1
BLAST of Cp4.1LG13g01380 vs. Swiss-Prot
Match: BCH1_CAPAN (Beta-carotene hydroxylase 1, chloroplastic OS=Capsicum annuum GN=CA1 PE=1 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 6.8e-93 Identity = 161/224 (71.88%), Postives = 189/224 (84.38%), Query Frame = 1
BLAST of Cp4.1LG13g01380 vs. TrEMBL
Match: A0A0A0KNU9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152820 PE=3 SV=1) HSP 1 Score: 433.0 bits (1112), Expect = 3.3e-118 Identity = 234/325 (72.00%), Postives = 258/325 (79.38%), Query Frame = 1
BLAST of Cp4.1LG13g01380 vs. TrEMBL
Match: V4MP18_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10025794mg PE=3 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 4.0e-100 Identity = 173/220 (78.64%), Postives = 202/220 (91.82%), Query Frame = 1
BLAST of Cp4.1LG13g01380 vs. TrEMBL
Match: A0A0K0K5D5_BRANA (Chloroplast beta-carotene hydroxylase OS=Brassica napus GN=CRTR PE=2 SV=1) HSP 1 Score: 370.5 bits (950), Expect = 2.0e-99 Identity = 172/220 (78.18%), Postives = 201/220 (91.36%), Query Frame = 1
BLAST of Cp4.1LG13g01380 vs. TrEMBL
Match: A0A0D3A6D4_BRAOL (Uncharacterized protein (Fragment) OS=Brassica oleracea var. oleracea PE=3 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 3.4e-99 Identity = 171/220 (77.73%), Postives = 201/220 (91.36%), Query Frame = 1
BLAST of Cp4.1LG13g01380 vs. TrEMBL
Match: A0A059CH62_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01823 PE=3 SV=1) HSP 1 Score: 368.2 bits (944), Expect = 9.9e-99 Identity = 171/214 (79.91%), Postives = 196/214 (91.59%), Query Frame = 1
BLAST of Cp4.1LG13g01380 vs. TAIR10
Match: AT4G25700.1 (AT4G25700.1 beta-hydroxylase 1) HSP 1 Score: 361.3 bits (926), Expect = 6.1e-100 Identity = 187/289 (64.71%), Postives = 222/289 (76.82%), Query Frame = 1
BLAST of Cp4.1LG13g01380 vs. TAIR10
Match: AT5G52570.1 (AT5G52570.1 beta-carotene hydroxylase 2) HSP 1 Score: 355.9 bits (912), Expect = 2.6e-98 Identity = 165/213 (77.46%), Postives = 191/213 (89.67%), Query Frame = 1
BLAST of Cp4.1LG13g01380 vs. NCBI nr
Match: gi|449452452|ref|XP_004143973.1| (PREDICTED: beta-carotene 3-hydroxylase 1, chloroplastic-like isoform X1 [Cucumis sativus]) HSP 1 Score: 433.0 bits (1112), Expect = 4.7e-118 Identity = 234/325 (72.00%), Postives = 258/325 (79.38%), Query Frame = 1
BLAST of Cp4.1LG13g01380 vs. NCBI nr
Match: gi|659073923|ref|XP_008437325.1| (PREDICTED: beta-carotene hydroxylase 2, chloroplastic-like isoform X1 [Cucumis melo]) HSP 1 Score: 426.4 bits (1095), Expect = 4.4e-116 Identity = 228/325 (70.15%), Postives = 254/325 (78.15%), Query Frame = 1
BLAST of Cp4.1LG13g01380 vs. NCBI nr
Match: gi|567219302|ref|XP_006413280.1| (hypothetical protein EUTSA_v10025794mg [Eutrema salsugineum]) HSP 1 Score: 372.9 bits (956), Expect = 5.8e-100 Identity = 173/220 (78.64%), Postives = 202/220 (91.82%), Query Frame = 1
BLAST of Cp4.1LG13g01380 vs. NCBI nr
Match: gi|488509747|gb|AGL08131.1| (chloroplast beta-carotene hydroxylase [Brassica napus]) HSP 1 Score: 370.5 bits (950), Expect = 2.9e-99 Identity = 172/220 (78.18%), Postives = 201/220 (91.36%), Query Frame = 1
BLAST of Cp4.1LG13g01380 vs. NCBI nr
Match: gi|685260334|ref|XP_009139437.1| (PREDICTED: beta-carotene 3-hydroxylase 1, chloroplastic [Brassica rapa]) HSP 1 Score: 370.5 bits (950), Expect = 2.9e-99 Identity = 172/220 (78.18%), Postives = 201/220 (91.36%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |