Cp4.1LG13g00170 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG13g00170
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Suppressor of auxin resistance 1 protein
Location	Cp4.1LG13 : 163118 .. 176312 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGCGTCGGGTGCCATTAGCCGGAATGGAGACCTCGATCATGGCTACCGACGCTGTAGAATTCATTGATGTTTCTGTTCCTTCTTCCTCATTAAGAGATGGCGCCATTACTTCCGTTGCTCCACCAGCTTGCACCTCATTCACTGAGGACCATGCCTCTTGCGCCGTCGTAGGAGATCCTCCAACCTATCTCATCTGGTATGTTCCTGATTTCCCTCGCACTTTATTAACTCCCTGGTTCGGTGCTAATAAGCCCTGTTGCCCTTCCATTCTTCTTACGCATCAGGAGGATTCGGAAGATTCGACCTCATGTGGTCGAGCTGCTTCAGTTTTCAACTGCCAATGAATTTCGTAGGATTGGTCTTCGAATTGCCTTTCCGGAAACACTTCACCCAGCCGTGTTTGTCTGCACTAACGAGGTTAATTTCCATTTTCCTAGTCTGAATTTTCAGCCTGTTGGAATATTTCGACGTATTATTTATGGCCGTGTAACACTGCAGATAAGTTCGTCTACTGGACATCCTTTCTTGATGTACGCCGTGACTTCGTCCGGGATCGCTTATTGTTTGAAGCTGCGAAATGTTTCCTCATACATATCCTGCTCTGTCATTCCTCTTGATGAGGTTGTGGAGTTTAATTTGCACACTCATCCGGACAGCAAACCAGTAACCAGCGTCTCTGCTATATCTGGATGTCTCGTGATTGGGAGACATGATGGATCAGTTTCATGTTTCAAACTTGGGTCGCTTGACCAACATAGCCCTGGTATGTATTTACTTTTCATTTCAACCAGTGGCTACATTATCTATTGTAATTTGTCCAAGCATGATCGAGAAAAATAGGAAGCTTCTTTATGCGATCCAGAACAGATGGTTGTTGGCTTAAAACTGTAGGATGTTCTTTGTCAATTCCGAAATGCTTTCGTGTATTGCTATTTCACATCTGTTATTTTTATTTATTACTGTTTAGACGGCGGCTTAGACTGTGCCACCGGATGTCAATGCAAACATACAGCTATCTGCAATTGATTTTAATTCTCCATATTTTGTCNCACCGGATGTCAATGCAAACATACAGCTATCTGCAATTGATTTTAATGCAAACATACAGCTCTCTGCAATTGATTTTAATTCTCCATATTTTGCCCCGCCCTGCTATTTAGAATCCTTGAAAACTTGTATTATTTTGTTACATTTACGCATTATCTCTAACAATTAGTATTTATTTAACTTCTAGGGTTTCAACATGAACTACGGGATGATTCAGGATTCAATCGTCTCTTGGGTTTCATTTCAAGGTGCACACTTTTGAAATATCACATTATTCAGACGTGCATCTTACTTAAATTTGCTTGCTTCTTGTTTCTGATTGAATGATTGGCNATGAACTACGGGATGATTCAGGATTCAATCGTCTCTTGGGTTTCATTTCAAGGTGCACACTTTTGAAATATCACATTATTCAGATGTGCATCTTACTTAAATTTGCTTGCTTCTTGTTTCTGATTGAATGATTGGAAATGAGGTTGGCGTTTTCAGTCTCAAGCACATATTTGAACATGTATTTTTAAAGAACATTTTAAGAAGGATTATACTTAATATTAATTAGCATTACTTTAAGGTTATCAATAGAGGTTGGCATTATAGTTCACATCCTTAAAAAAAAAAAAAAAGGTTGGCATTGGCAAGCAAATTTAGTTTTGGAGTGCAGGGTGTTTCTTCCTGCAAGAAGAGATTTCCTATTCTATTCAGCATTGTGTTGGCTCTTAGTGGTTCTATCTTTTTTCAAAGATCAATTATTATCTTGGAGGGAGTCTATTGTTTTGTCCAAGTTCTACTCTATTCATTGGTGCTCTTTGTTTGATAATTACACTCATGATATTTGTTTTGATTGTGTTGCATTCACTTTCCCTTGTTAGTTTTATTTTTTTGNTTGATTGTGTTGCATTCACTTTCCCTTGTTAGTTTTATTTTTTGTNCTATCTTTTTTCAAAGATCAATTATTATCTTGGAGGGAGTCTATTGTTTTGTCCAAGTTCTACTCTATTCATTGGTGCTCTTTGTTTGATAATTACACTCATGATATTTGTTTTGATTGTGTTGCATTCACTTTCCCTTGTTAGTTTTATTTTTTGTCTTTATTTTTCTCCTAATTGAAGACTGTTTTCTTGTTTTACTTTTTCACCGATCACTGAAAAGTTCATTTTTTATGACCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTTGGGATTTTGAGTAGCATTACTTGGTCATTTTCCTTGGTTTCTTTGATTTATTAATTATTATTTAATAGATATTAAAATGCACTCTCATTTAATTGAGGAAAAGAATTTAGGCAAAGAGGTAACAATGTGGATATTTTTATGGTGAGGAGGTCAACATCCATATATACGTAATGACAACATGGAAGCAATTTTTTTTGGACAGGAAATTGAAAAGGAACTAAAGAGAGGTATCGAGGAACAAGTGAAATAATGTTTATGGAATGGTCTTGTCGAATATTTGCAAGTGTTGGGTATATTCGTCTTAAGTTCCAAGCCGAAGGTGAAAGAAAAATATCTTCGGGGGGAAAAAAATTTAAAAAGTTTTAAAGAATTGATAAATTGATTTTTGAAATATATTATTAAACAAATAATGGTATGATACCCTTGGAGGGGAAAGCCATGGTTGATGATGATCCTATCTTGAGTACTAAGGGACCTGAGGATGTTAAAAAACAATTATATTAAAAATGTAGTTAGGTGGATTTGTCTTGATGTGATTATGATTCAAGAATCTAAATTAAGAAACATGGAAAAACTGATTTTGAGTTTTACATATATCATGTAGGAAAAGGTCGAGGTCATTGAAAGATCAGGTGGTTTGGTCATTCTTTAGATGAGAGAAAGGTAAAAGTAGTGGAAGTACTAAAAGGAGTGTACTCTTTGAGTTAACAAAAAGGAGTTCTCTCTCTTCCTCAAAGGTTGGTGATGCAAGGTGGTACAATTGTTTGGATTACAAAATTGTATGGGCAATACAAATGTAAGGAGGATTTTTTTTTGATAAAGTATATTAGGAGGAATTAATGACTCTTCTTGAGTATTTGGCTAGAGCTTGATGTATACAAGATCTTAATATTTGTAGATGGTCATATGAAAAATATATATGTGATTATGATTCAAGTATTCGGATTACGGAACATGGAAAGGCTAATTTGGAGTTTTACAAATATCATGGAAAGGTAGAGGTCATTTGCAAATCAGGTGGTTTGTTCATGCTTTGGATGAGGTAAAGGTAAAAGTAGTGGAAGTACTAAAAGGAGTGTACTCTTTGAGTTAATAAAAAGGAGTGCTCTCTCTTCCCCAAAGGTTGGTGATGCAAGGTGGTACAATTGTTTGATTACAAAATTGTATGGGCAATACAATTGTAAGGAGGAATTTTTTTGATAAAGTATATTAGGAGGAATTAATGACTCTTATTGAGTATTTGATTGAAGCTTGATGTATAGGGGGAGATCTTAATGTTTGTAGGTGGTCATATGAAAAATCTAGATGTCATTTAAGTATCCGGATTATGGGACATGAAAAAACTAATTTGGAGTTTTACTTATATCATGTAGGAAAAGGTAGAAGTCATTGGAAGATCGAGTGGTTTGTTCATTCTTTGGATGAGAGAGGTAAAAGTAATGGAAATACTAAAAGGAGTGCAGTCCTTTAGTTAATAAAAAAGAGTGGTCTCTCTTCCCCAAAGGTTGGTGATGGAAGGTGATACGGTTGTGTGGATTAAAAAATAGTATGGGGAATACAAATATAAGGAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAAAGTATATAAGGAATTAATGACTCTTCTTGGGTATTTGACTGGAGCTTGATTTATAAAGGGAGATCTTAATGTTTGTAGATGGTCATGAAAAATGTAGATGTGATTATGATTCAAGTATCCAAATTAAGGAACATGGAAAGATTGATTTGGAGTTTTACAAATATCATGTAGGAAAAGGTAGAGGTCATTGGAAGATTAGGTGGTTTGTTATTCTTTGGATTAGTGAAAGGTATATGTAGATGAAGTACTGTAAGGAGTGTATTCTTCGAGTTAATAGAAAGAAGTGCTCTCTCTTCCCCAAAGGTTGGTGATGGGAGGTGGTACAATTGTGTGGATTACAAAATATTATCGACGATACAAATATAAGGCCGATTTTTTTTGATGAAGTATATAAGGAGGAATTAATGACTCTTCCTGAGTATTTGACTAGAGCTTGATGTATACAGGAAGATCTTAATATTTGTAGATGGTCATATGAAAAATATATATGTGATTATAATTCAAGTATTCGATTACAGAACATGGAAAAACTTATTTGGAGTTTTTCATATATTATGTAGAAAAAGGTCGAAGTCATTAGTAGATCAGACGATTTGTTCATNTCTTAATATTTGTAGATGGTCATATGAAAAATATATATGTGATTATAATTCAAGTATTCGACTACAGAACATGGAAAAACTTATTTGGAGTTTTTCATATATCATGTAGAAAAAGGTCGAAGTCATTAGTAGATCAGACGATTTGTTCATTCTTTAGATGAGAGGAAGGTAAAAGTAGTGGAAGTACTAAAAGAGTGTACTCTTTGAGTTAATAAAAAGGAGTACTCTCTTCCCAAAGGTGGGGATGGTAGGTGGTATGATTGTGTGGATACAAAATTGTATGTGCAATACAAATATAAGGTGGATTTTTTTTTTTTTTTTGTTGATAAAGTGTACAAGGAGGAATTAACAACTCCTCTTAGGTATTTGGCTTGAGTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATAAAGTGTACAAGGAGGAATTAACAACTCCTCTTAGGTATTTGGCTTGAGCTTGATGTATAGGGGGAAATTTTAATGTTCGCAGATGGTCATATGAAAAATCTAGATGTGATTATGATTCAAGTATTTGGATCAAAGAACATGGAAATTGATTTGGAGTTTTACATATATGATGTAGGAAAAGGTAAAGGTCATTGGAAGATGAGGTGGTTTGTTCACTTTTTTGTTGATAAAAGGTAAAAGTAGTGGAAGTACTAAAAGGAGTGCATTCTTTGTGTACATAAAAAGGAGTTGTCTCTCTTCCCCAAAATGTTGATGATGGGAACTTTGACGATTGTGTGGATTATAAAGTTACAGGCAATACAAATATACGAAGGATTTGTTTTAATAAAGCATATAAGTAGGAATTAATGACTCTTCTTGGGTATTTGATTGGAGCCTTATGTACATGGAGATATCTTATTATTTGTGAATAGTCATATGAAAAATCCAGATGTGATTATGATTCAAATATACGGATTAAGGAATGTGTAAAAATTGATTTGGAGTTTTACATATATCATGTAAGTAAAGGTAGAGGTCATTGGAAGATCTGTTGGTTTGTTTATTCTTTGGATGAGAGAAAGCTTAAAGTAGTGGAAGTCCTAAAGAAGTGTAATTTTTGAGTTAATAAAAAGGAGGGCTCTCTCTTCCCCAAAGGTTGGTGATGGGAGGTGGTACAACTCTGTGGATTACAATTTATAGGGCAGGGCAATACAAATATAAAGGTTTTTTTTTTTTTTTTTTTTTTTTGATAAAGTATATAAGGAAGAGTTAATGACTCTACTTGGGTATTTGACTGGAGCTTGATGTATAAGGGGACATAAGGTTTGTAGATGGTCATATGAAGAATCTAGATGTGATTATGATTCAAGTATGCAGATTAAGGAACATGGAAAAATTGATTTGGAGCTTTACAAATATCATGTTGGAAAAGGGTAGAGGCTATTGGAAGATCAGGTAGTTTTGTTTATTTGTTGGATGAGTGAAAGGTAAAAGTAGTGGAAGTATGAAAATGAGTGTACTCATCGAGTTAATAAAAAGAAGTGCTCTCTCTTCCCTGAAAGCAATCATTTACAAAGGATAAATAAGCGAATGTATGGATTACAAAACTTTTCATTGAAATAATGAAAAGAGAGTAATGCTCAAAGGATACGAACTCGGTAGAGGAGTGAAATAAAGTAGTAAAGAAAGAAATAGTTTACAAAGGATAAATAAAGTACTTCAGTTTTGATCAGTATCCTGGAGAGAGAAATCAATAAAAACATCAGTAAGAGAACACCAAAGAGAGGCTTTACGCTGAGCAGATTCATGGAAAATCTAGGAGCTGAACTTCTCTGAAAAAATCTGCGAATTTATTTCCTGCCATACCTTCGCAAGCAAAGCTTTGACAATTTTTATCCATAGCAAATGAGGATGCAGGAGTAAAGAAGGGCAAGGTAGAAGCTGAAGAACATTATCTTTGGCATTTGAAGAGAAAACCAATGCATCGAAGGAGCTGAATAACCTGAACCAGCAAGCTTTAGAGTAGCAGTAAAAGAAATAAGTGATTGAGAGACTCTCAAACCGAGCCATAGAGGAAACAAATAGATGGTTGAAGACAAGTCTATTGGACACATCAAAATCCAAGTAAGAATGTTGATTCTTTTTGGGCTTTTTATCTTCCAAATAGATGGGAAGAAAAACTTGGCCAGTGGAGGAGAGGCTTTTAACTTGTTTGATAAGGACTCAACCGAAAATGAACCCGAGGCCTCAAGAGACCATTTTCTACAATCTGCACAATAATGATTGAAATGACAGAAAGAGCTTCGGTGAGATTATTAAAATTTGAAATCTTAACCTCCTTAAGCAATCTTCAAAAAGTTTCCTAGCAAAACACAAATAGTTCCAAAATTCTGAAATAGAGCCATTTCAAAGAGAGGAGATGCTGAATAGACAAGGAAATCTGTCCTTTGGGGAAGAAATTCTTATCCAATTGATCATGCCAAACTGAGATTCTTTCACCATTCCCTACAGAAAAGGGAGCATAGATTTCCACTGATTTCCAAGTTCTAGAAATACTAATCCATGAACTTTGCAAACTAGAATTCGATCTTCCAATAGTATGCCAACCAAAAACATTTGACCATAGAGAATGGGCTCAGAAATCACCTTCTTTCATAGAGAATGGGCTCATTAAAAGAGTGCCAATCCCATTTAACAATCGAAGCCAGGTTTCTGTTCATCAGGCCTCCTATGTCCAAGCCACCTTCACTTGGAGAATTAGTAATTATCTTCCATCTAGCAAGATGAGTAATCTTCCCTCCACTACTCCCGCCCCAAAAGAAATTCTGCATGGATCTTTCAAGTTCCAAACATATGCCGGAGAGAATGAGGAAAATAGACATAATATAAGGGAAAATTAGAAAGCACCGACTTGCAAAGTCTATTCTTTGAGCTGAAATCAAATGCAGCTTAGAATCCTCTACATTAATTTTTTGTAAATATTTTCTATTAGGGCATAACTTTGCTAGTCCATAGAATAATTAATGGGGAAAGAGGACTCCCTTGCCTAATTCCTATGGTACAATAACTCTACCTCAGGGCCGTCCATTAATGAATATACAAAATTTGGGGTTTCGAACACACCCACTAATCAATTGAATCCATTTTTGAGTCAAAACGTCTTAGCACAAAAACCTGTTCAAGAAAATCCCAATCAACCAGGTCAAAGTCCTTTCAATCTCCAGCTTTAAAACCCAACCCTTTTTTTCTTTAGTCTATATTCTTCCACAATTTTGTTAGTAATGAGAATGGGGTCAAGGATTTGTCTTCCTTCAATGAAAGCACTTGGGAGACTGAGATAATTGAGGGCATAATTGTGAAACCTTGAATTGAACTATTTGGTTGGCTCATTTATCTATTCAACCTTTCTTTCCTTCATTCTTTTTTTTCGTAAGAACAAAATTTGAACAGGTTTTTTGTTTTCTTTATTCATGGTGCTAAAGTTGTTAAATTTATTGCATTTATTTGAAGAAAATATGAAAAGTTCACTTGAAGTTGTTTATATTGCAGAATTAATTTATAGTGCTGTATTTTATAGTTCAATCTTTTTTTTATTATCTAAGTTTCTTTTAAAAAACTGATAGCTTGGCTTCCCATAAAAAAATGATGGCTTGACTTCTCATAAAAAAAAAAGAATGATAGCTTGGTTTCGTGCAGGGTCAAGTTGGCAGGAGCTGTGCATGATATGGTAATATCTGAGGTCTGTGGAAGACAGTTTCTGTTTGTTCTTCATTCTGACGGAGTCTTACGAGTGTGGGATCTTTCATGTCACAGTAGGGTACTCAATCACTCCATGAATATTGCAACTATGGCAGGTACTTTTATTACCCAAAATAACCTTAGAGTAATATGTTTTGCTTATCTCTCGTGGACGAATACATAAATGATTTGCATCCACAATAGGTATCGAGATGGATAAAGAATGAATGGACAAGTATAGCTTCCTTAGATATATGACCTCTCGTAGTTGCTAGACATCCCTAAACTCCTAACAATAAAACATACGCACATTCAAGCCCAACATAATTGAGAGATTGAACACAAGTGGGAAAACAATAGATCAAGAGGAGGTACTGCCAATCCAATGATCTTCCCGGAACTTGACATGATTATACTTCCCAACTGAATACTTGATAGAAATTTGGCAAGCAATTAGAAGTAGCCTTCCATGGATATTAGATGGTTGCATGAGAAACTGCAACCATGTGTAACTAATGGAGAGCACATGTTTATTAATAATAATTTGATGTCAAAGTTTGTCAGGTTCTAGTGGAAAACACCGTATACATTTGGGTAGAAGTGCAATGTTCCTGGAAGCAACATTTTCAATCATTCGACATCCTTTCTTAACGAGAGGGTATTAATTAATCGTAGGTGGTATGAAAAGGGACAAATGAAATTTCTTCCTCCGGTGACTTTGTGGAGTATGTGGATCTAGTATTAACCCATTTCAAATGGTCATTTAAAAGTAGTGTTGTTAGACTTATATGATACATGAGTTATACTATGGGAATTGAAATGGAAGGGAGCTCCCCGATAATGAACTTGCTTTAGAATCGAAGATTGAATGATCAGTGAATTTCCAAAATTTGATTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAATGGGAAGTCCCACTAAAGGGACTCGAATCAAGTACAAGGAAACCTAATATATAATTACAAAAAAAAAAAAAAGTCTGGAAACTCACTGATATATGATATCTGATTCTACAGATAGGAAGGAAAATGTCCAATTTTTTTCAATTGAATTGAAACATGGTATAAAATTAACTGTATGACATTGCATTTATATACTTACTCTTCCTTTCTTTTCTGGGGTTTTAGAAGCAAAGTTTGTGAGGTTGTGGGTGGGCCAAGGGAGCATCGATACGAGTACAATGCCTTTGGCAATTCTCTATAAACACCCGGTACATTCTTAATTAGTTTCTCTATTAGATTGCTTTCTATGTAACTTGTGTGTAGATTAACATTATATTTCCAGCACTTGTATAAGGAATCTCTATTCCATACAAAGATTTATAGTTTATAGAGTTGAATCTTTGCTGTGCATTCTCTCATTGTCCCCATTTCATATATAAGTTTGCCTTTAATGCATGAGCAAATGAAAGATGTGTAAAAATTGGCATATTTGTTCATGTATTTGATCTAAATATTAAATCAACCTTTAAATGAATGCAACTTTAAATTGTCGGTGATTCAAAATTATGTGACAAAGATGTAGGCCCCTTTTGGTTCCTGATCCAAAATCTTGTGTTGGGGAACAAAAGATGTACAATTGTTTTTTTTTTTGGGAAACGTGTAGCAGATTCACATAATTTAATGTTGTATGTAGAATCTAAAAATTGTGTTTGATTGCAATTTTGTTTACAAGAAATGTGGACCATATTAAAGAACAAGGAGCATACTAAAAAGAGGGGTGATGCCCCATTGGATCAAAGTGGTTACAAAAAGGTGACTCAATTGGTCCAGGAGGCAGCAAAGAAAATAATTTATGGGAATTGCTTTGGAATTTTAAGTCACAAAAAGTAAAACTATAGGAAGCCATCCATCTTTGAAACAACAGGAAAATGATCAGACATAATCCGAGGAAGTCTGACAACTGTAGATTTCTTGAATTTTGCTAGCCAATCTTCATTCATTTGACATCTATCAATCGAAAAAAACAGGTGCCTCTCACCATTATACCATGTGAAAGGCCAATTTGGGAGAGGAACATCAACCAAATCGAATTCACTAATAAACTTGTTGAATTCCCTCGTACTTCTGGTTATCGTTCCTCCTGAAGATCTCTCTTGCATCCATCTTACGAAATATTAAAGTTACCGCGATGCACCGATCTCCTGAGACAAAAACTTCCAATAACATAAAATTCCTTCTAAAAACATTCTTGGTCCTGAGTAAAATTAGGGCAATAGACTCCTGTCACTTAACGAGACCATCCATCAGCCCACTAAATATTAAAATTCACCTATTAATGAGTCCCTAACTATCATGGAGCTTTTCATCCGACAAACACAAAATGTCACTTGAAGAGCCTAACGATTGTTAGATTGTCCACCCCACAAACCTAGAGCTCGACACTGACTTAGCAAGGCTTGTAATGATTTGATCCCTTTTTATCTCTTGAAGAAACACAATATTTGGCTTAGTATTTGACAAAACTTCTTTGATGAGGTGCCTCTTTCTAGCCTTGCTTAAGCCTCTTAACATTTCACAAGGAAATCTTCGTAAATCCGGACTTACCCCCTTCTAAATCTTTAGATGTGTTGCCTTTGTCATAGTTTGTCATAGTTTGTCATAGTGATTAAGTTTTCCAACTCCATATGCCCCTTTTGTTTTTTCTTATTTTGATTCTTGGCTATCTGATTGCCTTCGGGCATTATCAGCTCCTCGTAATCAGGACTTTCAGGACTTTCTATGATTGTAATNCCTTTGTCATAGTTTGTCATAGTTTGTCATAGTGATTAAGTTTTCCAACTCCATATGCCCCTTTTGTTTTTTCTTATTTTGATTCTTGGCTATCTGATTGCCTTCGGGCATTATCAGCTCCTCGTAATCAGGACTTTCTATGATTGTAATGAGCCCTTTCATCTAGGATCAAGATTGTGCCACTGCCCATTTTAAAAGCTTCCAGCATTTCTACCTGCAATATTTTTGTCTTGAACAAATTCTTCTTAAAAAAAAAACCTTTCAACCCCTTTACACCAAAGTCTGATCCCATCGAGACATCCTCCTCCATCCTTATTTTCTTTGAAGACGGTGAGCTTAGGTAGTAGAAANTTAAAAAAAAACCTTTCAACCCCTTTACACCAAAGTCTGATCCTATCGAGACATCCTCCTCCATCCTTATTTTCTTTGAAGACGGTGAGCTTAGGTAGTAGAAAAAATCTTCATTATTTGAAAAGAAACCTCTTTTCCCGGGGGGTTAAGCATGTATTGCCATTTTTAAAATTGTTTCTTTTTTCAAACTATTTTAGCTTAGGGGAACGTTGTGGCTCTATTGTTTTTTTCCATTCAGTGGGGACATTGCCATTTGAATTTGATGTTTGTGAAGCGCGGTCACATGTTGCTGAATCCCCCTCGATTAGCCAAAATTTGTTATTATTACTTTTCTATCGAAATCTAGCACAGGCTTGGTTCTCACCTCCACACTTCAGTTCCCTGCATCCAGTGAAGCAACCTTCATCTAGTACTATTTACTCTTGAGGCCGTTGTAGTGTAGAGGATGTTGTTGTCGTGGGGGGTGCAGTCAAACCTTGCCAAATTGTTAGGATTTGCTCTACTTGTTTTCTAAATGCCCCTTCTCTGTTTCTATTTGGTAAAAATTTCTCATCTTCTTAGGTATTAGTTGATGCTTTCCCAAAAATGGGGGGTGAGGCCTTCCTTCAGCTTACTAAAGGGATGAGATGACNCATCTTCTTAGGTATTAGTTGATGCTTTCCCAAAAATGGGGGGGTGAGGCCTTCCTTCAGCTTACTAAAGGGATGAGATGACTTTTAAGGGTCGGGCTAGAACTCTTTGGTCCAACACAATTATGGCTTCTTGTCCAGAAGACTTTTGGGACTCAATAAGTATGTTTGTATATGTTTTATTATACAATTTTGTTAGGTTTTATGTTTCTCTTTGGGCTTAAGACGAAGCTTGTTTGTAATATCCTTTAGGTTTTATTTTACTCGACTTGGGCATCTTTGTTTAGTTTGGCTAGCTCCCTTTCTGTGGGCATGGTTTTTTGTATGTTCTTGTAATATATCAATGAAAATTTGGCTCTTCATAAAAAAAGCGGCTTATGATATTAAATTGGAACTTGATAGTATAGCATTGCTATATGCTAAAATTAATTTTATATATTAGATGTCTATCAAGACCCCCTGCCCCAGAAATGATGTTGTCTTGAATCAATTAACTTATTTTATAGAGTAACGTTGTGTATGATTTTTTGGTACAATTTAATACTTAATTCCCCCACCTCAATATCAACTAATATATTTACAAAATTGTGAAGGATCATAGCCTGGAAATGATCAACATATATCGTTTACATTTTAGTTGGGGAGACAGGGTCAGTCTATTATTGGAGCCTTCAACACACAATATTCCCTTTAATCAGGTAGTAGAAAGTAAATGATATCTCATTCAATTTTGAGTTTTTTGACTTACTAAAATTTATTTGAATTCATAATTTTTGAGCTTGATAGTCGTTGCTCCAATTTTCATTAGGGTGGGTGTCTTGATGTAAAACTTGCATCTGATAAGATATGGATCTTAAAGGACAACACACTGATCTTTCTCGACTTGTTCCCTTCCGATGGTCATGTGTAA

mRNA sequence

ATGGGGCCCGGAATGGAGACCTCGATCATGGCTACCGACGCTGTAGAATTCATTGATGTTTCTGTTCCTTCTTCCTCATTAAGAGATGGCGCCATTACTTCCGTTGCTCCACCAGCTTGCACCTCATTCACTGAGGACCATGCCTCTTGCGCCGTCGTAGGAGATCCTCCAACCTATCTCATCTGGAGGATTCGGAAGATTCGACCTCATGTGGTCGAGCTGCTTCAGTTTTCAACTGCCAATGAATTTCGTAGGATTGGTCTTCGAATTGCCTTTCCGGAAACACTTCACCCAGCCGTGTTTGTCTGCACTAACGAGCCTGTTGGAATATTTCGACGTATTATTTATGGCCGTGTAACACTGCAGATAAGTTCGTCTACTGGACATCCTTTCTTGATGTACGCCGTGACTTCGTCCGGGATCGCTTATTGTTTGAAGCTGCGAAATGTTTCCTCATACATATCCTGCTCTGTCATTCCTCTTGATGAGGTTGTGGAGTTTAATTTGCACACTCATCCGGACAGCAAACCAGTAACCAGCGTCTCTGCTATATCTGGATGTCTCGTGATTGGGAGACATGATGGATCAGTTTCATGTTTCAAACTTGGGTCGCTTGACCAACATAGCCCTGGGTTTCAACATGAACTACGGGATGATTCAGGATTCAATCGTCTCTTGGGTTTCATTTCAAGGGTCAAGTTGGCAGGAGCTGTGCATGATATGGTAATATCTGAGGTCTGTGGAAGACAGTTTCTGTTTGTTCTTCATTCTGACGGAGTCTTACGAGTGTGGGATCTTTCATGTCACAGTAGGGTACTCAATCACTCCATGAATATTGCAACTATGGCAGAAGCAAAGTTTGTGAGGTTGTGGGTGGGCCAAGGGAGCATCGATACGAGTACAATGCCTTTGGCAATTCTCTATAAACACCCGGATCATAGCCTGGAAATGATCAACATATATCGTTTACATTTTAGTTGGGGAGACAGGGTCAGTCTATTATTGGAGCCTTCAACACACAATATTCCCTTTAATCAGGGTGGGTGTCTTGATGTAAAACTTGCATCTGATAAGATATGGATCTTAAAGGACAACACACTGATCTTTCTCGACTTGTTCCCTTCCGATGGTCATGTGTAA

Coding sequence (CDS)

ATGGGGCCCGGAATGGAGACCTCGATCATGGCTACCGACGCTGTAGAATTCATTGATGTTTCTGTTCCTTCTTCCTCATTAAGAGATGGCGCCATTACTTCCGTTGCTCCACCAGCTTGCACCTCATTCACTGAGGACCATGCCTCTTGCGCCGTCGTAGGAGATCCTCCAACCTATCTCATCTGGAGGATTCGGAAGATTCGACCTCATGTGGTCGAGCTGCTTCAGTTTTCAACTGCCAATGAATTTCGTAGGATTGGTCTTCGAATTGCCTTTCCGGAAACACTTCACCCAGCCGTGTTTGTCTGCACTAACGAGCCTGTTGGAATATTTCGACGTATTATTTATGGCCGTGTAACACTGCAGATAAGTTCGTCTACTGGACATCCTTTCTTGATGTACGCCGTGACTTCGTCCGGGATCGCTTATTGTTTGAAGCTGCGAAATGTTTCCTCATACATATCCTGCTCTGTCATTCCTCTTGATGAGGTTGTGGAGTTTAATTTGCACACTCATCCGGACAGCAAACCAGTAACCAGCGTCTCTGCTATATCTGGATGTCTCGTGATTGGGAGACATGATGGATCAGTTTCATGTTTCAAACTTGGGTCGCTTGACCAACATAGCCCTGGGTTTCAACATGAACTACGGGATGATTCAGGATTCAATCGTCTCTTGGGTTTCATTTCAAGGGTCAAGTTGGCAGGAGCTGTGCATGATATGGTAATATCTGAGGTCTGTGGAAGACAGTTTCTGTTTGTTCTTCATTCTGACGGAGTCTTACGAGTGTGGGATCTTTCATGTCACAGTAGGGTACTCAATCACTCCATGAATATTGCAACTATGGCAGAAGCAAAGTTTGTGAGGTTGTGGGTGGGCCAAGGGAGCATCGATACGAGTACAATGCCTTTGGCAATTCTCTATAAACACCCGGATCATAGCCTGGAAATGATCAACATATATCGTTTACATTTTAGTTGGGGAGACAGGGTCAGTCTATTATTGGAGCCTTCAACACACAATATTCCCTTTAATCAGGGTGGGTGTCTTGATGTAAAACTTGCATCTGATAAGATATGGATCTTAAAGGACAACACACTGATCTTTCTCGACTTGTTCCCTTCCGATGGTCATGTGTAA

Protein sequence

MGPGMETSIMATDAVEFIDVSVPSSSLRDGAITSVAPPACTSFTEDHASCAVVGDPPTYLIWRIRKIRPHVVELLQFSTANEFRRIGLRIAFPETLHPAVFVCTNEPVGIFRRIIYGRVTLQISSSTGHPFLMYAVTSSGIAYCLKLRNVSSYISCSVIPLDEVVEFNLHTHPDSKPVTSVSAISGCLVIGRHDGSVSCFKLGSLDQHSPGFQHELRDDSGFNRLLGFISRVKLAGAVHDMVISEVCGRQFLFVLHSDGVLRVWDLSCHSRVLNHSMNIATMAEAKFVRLWVGQGSIDTSTMPLAILYKHPDHSLEMINIYRLHFSWGDRVSLLLEPSTHNIPFNQGGCLDVKLASDKIWILKDNTLIFLDLFPSDGHV

Homology

[Close]

BLAST of Cp4.1LG13g00170 vs. Swiss-Prot
Match: NU160_ARATH (Nuclear pore complex protein NUP160 OS=Arabidopsis thaliana GN=NUP160 PE=1 SV=2)

HSP 1 Score: 253.8 bits (647), Expect = 2.9e-66
Identity = 148/370 (40.00%), Postives = 209/370 (56.49%), Query Frame = 1


Query: 4   GMETSIMAT-DAVEFIDVSVPSSSLRDGAI--TSVAPPACTSF--TEDHASCAVVGDPPT 63
           GME  +    + V++I++SVPS S+   +I   S     C     +ED+AS +V+G+P  
Sbjct: 11  GMEVPVAGGGNVVKWIEISVPSPSVSSSSIGANSSEDNECVQLPLSEDYASSSVIGEPSI 70

Query: 64  YLIWRIRKIRPHVVELLQFSTANEFRRIGLRIAFPETLHPAVFVCTNEPVGIFRRIIYGR 123
             +WRI K  P+ +ELLQ S  + F   GLR  F +TL P  FV  +E  G   R++Y  
Sbjct: 71  SFVWRINKTSPNALELLQLSAKSGFPITGLRFVFAQTLSPFAFVYADEG-GDSGRLVY-- 130

Query: 124 VTLQISSSTGHPFLMYAVTSSGIAYCLKLRNVSSYISCSVIPLDEVVEFNLHTHPDSKPV 183
                         +Y++T SG+ Y LKL N  +Y S SV PLD ++  ++  + +   V
Sbjct: 131 -------------FLYSLTPSGVVYVLKLSNTLAYKSGSVFPLDHLIHLDVRPYLNESRV 190

Query: 184 TSVSAISGCLVIGRHDGSVSCFKLGSLDQHSPGFQHELRDDSGFNRLLGFISRVKLAGAV 243
           TSV+A  G + +GR DG VSCF+     Q S GF  ELRDD+GF RL        +  AV
Sbjct: 191 TSVAASPGFIFLGRSDGCVSCFQPIVYFQKSSGFHQELRDDTGFGRL------GTVVAAV 250

Query: 244 HDMVISEVCGRQFLFVLHSDGVLRVWDLSCHSRVLNHSMNIATMAEAKFVRLWVGQGSID 303
            D+ ISEV GR +L VLH+DG LRVWD+  +SRVL  S+    +     VRLW+G+   D
Sbjct: 251 QDLFISEVHGRNYLCVLHADGALRVWDILTYSRVLCQSIAAKNLEGVMCVRLWLGKADYD 310

Query: 304 TSTMPLAILY-KHPDHSLEMINIYRLHFSWGDRVSLLLEPSTHNIPFNQGGCLDVKLASD 363
           +  +PLA+LY K  + S+++I +Y LHFS  + ++L L+    NIP  +G   DV+  SD
Sbjct: 311 SGIIPLAVLYRKSMNDSMDVITVYGLHFSSAEGIALSLDSGLQNIPLEEGELRDVRFTSD 358

Query: 364 KIWILKDNTL 368
           KIW LK N L
Sbjct: 371 KIWTLKANEL 358

[Close]

BLAST of Cp4.1LG13g00170 vs. TrEMBL
Match: A0A0A0LLC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G150000 PE=4 SV=1)

HSP 1 Score: 612.1 bits (1577), Expect = 4.7e-172
Identity = 308/376 (81.91%), Postives = 323/376 (85.90%), Query Frame = 1


Query: 4   GMETSIMATDAVEFIDVSVPSSSLRDGAITSVAPPACTSFTEDHASCAVVGDPPTYLIWR 63
           GMETSIMATD+VEFI VSVPSSS R+ AITSVA  A TS TEDH SC VVGDPPTYLIWR
Sbjct: 9   GMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGDPPTYLIWR 68

Query: 64  IRKIRPHVVELLQFSTANEFRRIGLRIAFPETLHPAVFVCTNEPVGIFRRIIYGRVTLQI 123
           IRKI PHVVELL+FST+NEF R GLRIAFPETLHPAVFVC NE                I
Sbjct: 69  IRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNE----------------I 128

Query: 124 SSSTGHPFLMYAVTSSGIAYCLKLRNVSSYISCSVIPLDEVVEFNLHTHPDSKPVTSVSA 183
           SSS GHPFLMYAVTSSG AYCLKLRN+SSY+S S IPLDEVVEFNL THPD+KPVTSVSA
Sbjct: 129 SSSMGHPFLMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSA 188

Query: 184 ISGCLVIGRHDGSVSCFKLGSLDQHSPGFQHELRDDSGFNRLLGFISRVKLAGAVHDMVI 243
           ISGCLVIGR+DGSVSC+KLGSLDQHSPGF+HELRDDSGFNRLLGFISRVKLAGAV DMVI
Sbjct: 189 ISGCLVIGRNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISRVKLAGAVQDMVI 248

Query: 244 SEVCGRQFLFVLHSDGVLRVWDLSCHSRVLNHSMNIATMAEAKFVRLWVGQGSIDTSTMP 303
           SEVCGRQFLFVLHSDG LRVWDLSCHSRV NHSMNIATMAEA+FVRLWVGQ + D ST+ 
Sbjct: 249 SEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEARFVRLWVGQANTDKSTIS 308

Query: 304 LAILYKHP-DHSLEMINIYRLHFSWGDRVSLLLEPSTHNIPFNQGGCLDVKLASDKIWIL 363
           LAILY HP D SLE I IY L FSWGDRVSLLLEPSTH+IP NQGGCLDVKLA DKIW+L
Sbjct: 309 LAILYNHPEDLSLETIYIYSLRFSWGDRVSLLLEPSTHSIPLNQGGCLDVKLAYDKIWVL 368

Query: 364 KDNTLIFLDLFPSDGH 379
           KDN LIFLDL  SDGH
Sbjct: 369 KDNALIFLDLLASDGH 368

[Close]

BLAST of Cp4.1LG13g00170 vs. TrEMBL
Match: A0A072VL71_MEDTR (Suppressor of auxin resistance 1 protein OS=Medicago truncatula GN=MTR_1g063180 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.7e-97
Identity = 177/367 (48.23%), Postives = 248/367 (67.57%), Query Frame = 1


Query: 4   GMETSIMATDAVEFIDVSVPSSSLRDGAITSVAPPACTSFTEDHASCAVVGDPPTYLIWR 63
           G E  I+ +DAV + D++VPSSS+        A     S T+D ASC+V+GDPPTYLIWR
Sbjct: 9   GKEVPIIGSDAVRWTDLTVPSSSI------FTADGGAASITDDRASCSVIGDPPTYLIWR 68

Query: 64  IRKIRPHVVELLQFSTANEFRRIGLRIAFPETLHPAVFVCTNEPVGIFRRIIYGRVTLQI 123
           I K +P  +ELL+ + + EF R+GLR  FP+ L+P  F+C NE                I
Sbjct: 69  IHKAQPQTLELLELTASKEFPRVGLRFTFPDALYPFAFICKNE----------------I 128

Query: 124 SSSTGHPFLMYAVTSSGIAYCLKLRNVSSYISCSVIPLDEVVEFNLHTH-PDSKPVTSVS 183
           + ++  P+L+Y +T SG+AY L++RNVS+Y SCS++P DE++E N+  + PD+  +T+V+
Sbjct: 129 TGNSRFPYLLYVLTVSGVAYLLRIRNVSAYGSCSILPEDELIELNVRDYIPDNAAITAVT 188

Query: 184 AISGCLVIGRHDGSVSCFKLGSLDQHSPGFQHELRDDSGFNRLLGFISRVKLAGAVHDMV 243
           A + CLVIG  +G V  F+LG LD  + GF HELRD++G  RL G ISR    G V D+V
Sbjct: 189 ATARCLVIGTSNGPVFSFQLGVLDPSAHGFVHELRDEAGIGRLWGLISRGNFVGTVQDLV 248

Query: 244 ISEVCGRQFLFVLHSDGVLRVWDLSCHSRVLNHSMNIATMAEAKFVRLWVGQGSIDTSTM 303
           ISE CG++F+F LH DG LR+WDL+ HS+V +H+M +  M+ A F+RLWVGQ   ++S +
Sbjct: 249 ISEFCGKKFVFALHLDGTLRIWDLASHSKVFSHNMGVMAMSGASFLRLWVGQFDPNSSII 308

Query: 304 PLAILYKH-PDHSLEMINIYRLHFSWGDRVSLLLEPSTHNIPFNQGGCLDVKLASDKIWI 363
           PLAIL +H  D  LEMI+++ + +++GDR+ L +EPS  NI   +G CLDVKL SDKIWI
Sbjct: 309 PLAILCRHTSDEKLEMISLHSILYNFGDRIVLSMEPSVQNISLEEGRCLDVKLMSDKIWI 353

Query: 364 LKDNTLI 369
           LKDN L+
Sbjct: 369 LKDNELV 353

[Close]

BLAST of Cp4.1LG13g00170 vs. TrEMBL
Match: A0A072VJG2_MEDTR (Suppressor of auxin resistance 1 protein OS=Medicago truncatula GN=MTR_1g063180 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.7e-97
Identity = 177/367 (48.23%), Postives = 248/367 (67.57%), Query Frame = 1


Query: 4   GMETSIMATDAVEFIDVSVPSSSLRDGAITSVAPPACTSFTEDHASCAVVGDPPTYLIWR 63
           G E  I+ +DAV + D++VPSSS+        A     S T+D ASC+V+GDPPTYLIWR
Sbjct: 9   GKEVPIIGSDAVRWTDLTVPSSSI------FTADGGAASITDDRASCSVIGDPPTYLIWR 68

Query: 64  IRKIRPHVVELLQFSTANEFRRIGLRIAFPETLHPAVFVCTNEPVGIFRRIIYGRVTLQI 123
           I K +P  +ELL+ + + EF R+GLR  FP+ L+P  F+C NE                I
Sbjct: 69  IHKAQPQTLELLELTASKEFPRVGLRFTFPDALYPFAFICKNE----------------I 128

Query: 124 SSSTGHPFLMYAVTSSGIAYCLKLRNVSSYISCSVIPLDEVVEFNLHTH-PDSKPVTSVS 183
           + ++  P+L+Y +T SG+AY L++RNVS+Y SCS++P DE++E N+  + PD+  +T+V+
Sbjct: 129 TGNSRFPYLLYVLTVSGVAYLLRIRNVSAYGSCSILPEDELIELNVRDYIPDNAAITAVT 188

Query: 184 AISGCLVIGRHDGSVSCFKLGSLDQHSPGFQHELRDDSGFNRLLGFISRVKLAGAVHDMV 243
           A + CLVIG  +G V  F+LG LD  + GF HELRD++G  RL G ISR    G V D+V
Sbjct: 189 ATARCLVIGTSNGPVFSFQLGVLDPSAHGFVHELRDEAGIGRLWGLISRGNFVGTVQDLV 248

Query: 244 ISEVCGRQFLFVLHSDGVLRVWDLSCHSRVLNHSMNIATMAEAKFVRLWVGQGSIDTSTM 303
           ISE CG++F+F LH DG LR+WDL+ HS+V +H+M +  M+ A F+RLWVGQ   ++S +
Sbjct: 249 ISEFCGKKFVFALHLDGTLRIWDLASHSKVFSHNMGVMAMSGASFLRLWVGQFDPNSSII 308

Query: 304 PLAILYKH-PDHSLEMINIYRLHFSWGDRVSLLLEPSTHNIPFNQGGCLDVKLASDKIWI 363
           PLAIL +H  D  LEMI+++ + +++GDR+ L +EPS  NI   +G CLDVKL SDKIWI
Sbjct: 309 PLAILCRHTSDEKLEMISLHSILYNFGDRIVLSMEPSVQNISLEEGRCLDVKLMSDKIWI 353

Query: 364 LKDNTLI 369
           LKDN L+
Sbjct: 369 LKDNELV 353

[Close]

BLAST of Cp4.1LG13g00170 vs. TrEMBL
Match: K7LZQ2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G142200 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 2.1e-95
Identity = 184/366 (50.27%), Postives = 246/366 (67.21%), Query Frame = 1


Query: 6   ETSIMATDAVEFIDVSVPSSSLRDGAITSVAPPACTSFTEDHASCAVVGDPPTYLIWRIR 65
           E  I+ +DAV +ID+SVPSSS         A P  T   +D ASC V+GDPPTYLIWRI 
Sbjct: 11  EVPIVGSDAVRWIDLSVPSSSNIAAVDDGGAAPLTT---DDRASCFVIGDPPTYLIWRIH 70

Query: 66  KIRPHVVELLQFSTANEFRRIGLRIAFPETLHPAVFVCTNEPVGIFRRIIYGRVTLQISS 125
           K +PH +ELL+ + + EF R+GLR  FP+ L P  F+C NE                IS 
Sbjct: 71  KAQPHSLELLELAASKEFPRVGLRFTFPDALCPFAFICKNE----------------ISG 130

Query: 126 STGHPFLMYAVTSSGIAYCLKLRNVSSYISCSVIPLDEVVEFNLHTH-PD-SKPVTSVSA 185
           ++  P+L+Y +T SG+AY LK+RNVS Y S SV P+DE++E N+  + P+ +  +T+V+A
Sbjct: 131 ASRVPYLLYVLTVSGVAYLLKIRNVSVYASVSVFPVDELLEVNVRGYIPNHAATITAVTA 190

Query: 186 ISGCLVIGRHDGSVSCFKLGSLDQHSPGFQHELRDDSGFNRLLGFISRVKLAGAVHDMVI 245
             G LV+G  DGSV CF+LG LD  +PGF HELRDD+G +RL G ISR K+ G V ++ I
Sbjct: 191 TVGGLVVGTSDGSVFCFQLGVLDSSAPGFMHELRDDAGISRLWGLISRGKMVGTVQELAI 250

Query: 246 SEVCGRQFLFVLHSDGVLRVWDLSCHSRVLNHSMNIATMAEAKFVRLWVGQGSIDTSTMP 305
            E+  ++F+FVLH DG LR+WDL+ HSRV +++M    MA A FVRLWVGQ   D+S +P
Sbjct: 251 LELHEKKFVFVLHLDGTLRIWDLASHSRVFSNNMGTMAMAGATFVRLWVGQPYPDSSVIP 310

Query: 306 LAILYKHP-DHSLEMINIYRLHFSWGDRVSLLLEPSTHNIPFNQGGCLDVKLASDKIWIL 365
           LA+LY+   D SLEMI++Y + F++GDR+   +EPS  NIP  +G CLDVKL  DKIWIL
Sbjct: 311 LAVLYRDTLDESLEMISLYSVLFNFGDRIVFSMEPSVQNIPLEEGRCLDVKLTLDKIWIL 357

Query: 366 KDNTLI 369
           KD+ L+
Sbjct: 371 KDDELV 357

[Close]

BLAST of Cp4.1LG13g00170 vs. TrEMBL
Match: I1L8X8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G055100 PE=4 SV=2)

HSP 1 Score: 341.3 bits (874), Expect = 1.5e-90
Identity = 177/369 (47.97%), Postives = 248/369 (67.21%), Query Frame = 1


Query: 4   GMETSIMATDAVEFIDVSVPSSSLRDGAITSVAPPACTSFTEDHASCAVVGDPPTYLIWR 63
           G E  I+ +DAV +ID+SVPSSS     I +V   A    T+D ASC V+GDPPTYLIWR
Sbjct: 9   GKEVPIVGSDAVRWIDLSVPSSS----NIAAVDGVAALPTTDDRASCFVIGDPPTYLIWR 68

Query: 64  IRKIRPHVVELLQFSTANEFRRIGLRIAFPETLHPAVFVCTNEPVGIFRRIIYGRVTLQI 123
           I K +P  +ELL+ + + EF R+GLR  FP+ L P  F+  NE                I
Sbjct: 69  IHKAQPQSLELLELAASKEFPRVGLRFTFPDALCPFAFIGKNE----------------I 128

Query: 124 SSSTGHPFLMYAVTSSGIAYCLKLRNVSSYISCSVIPLDEVVEFNLHTH-PD-SKPVTSV 183
           S ++  P+L+Y +T SG+AY LK+RNVS+Y S SV P+DE++E N+  + P+ +  +T+V
Sbjct: 129 SGASRFPYLLYVLTVSGVAYLLKIRNVSAYTSVSVFPVDELLEVNVRDYIPNHATAITTV 188

Query: 184 SAISGCLVIGRHDGSVSCFKLGSLDQHSPGFQHELRDDSGFNRLLGFISRVKLAGAVHDM 243
            A  G LV+G  DGSV CF+LG +D  +PGF HELRD++G +RL G ISR K+ G V ++
Sbjct: 189 MATVGGLVVGTSDGSVFCFQLGVVDPSAPGFMHELRDEAGISRLWGLISRGKMVGTVQEL 248

Query: 244 VISEVCGRQFLFVLHSDGVLRVWDLSCHSRVLNHSMNIATMAE-AKFVRLWVGQGSIDTS 303
           VI E+  ++F+FVLH DG LR+WDL+  SRV +++M   TMA  A FV+LWVGQ   D++
Sbjct: 249 VILELHEKKFVFVLHLDGTLRIWDLASRSRVFSNNMGTVTMAAGATFVKLWVGQPYPDSN 308

Query: 304 TMPLAILYKH-PDHSLEMINIYRLHFSWGDRVSLLLEPSTHNIPFNQGGCLDVKLASDKI 363
            +PLA+LY+   D +LEMI++Y + +++GDR+   ++PS  +IP  +G CLDVKL  DKI
Sbjct: 309 IIPLAVLYRDTSDENLEMISLYSILYNFGDRIVFSMDPSVQSIPLEEGRCLDVKLTLDKI 357

Query: 364 WILKDNTLI 369
           WILKD+ L+
Sbjct: 369 WILKDDELV 357

[Close]

BLAST of Cp4.1LG13g00170 vs. TAIR10
Match: AT1G33410.1 (AT1G33410.1 SUPPRESSOR OF AUXIN RESISTANCE1)

HSP 1 Score: 253.8 bits (647), Expect = 1.6e-67
Identity = 148/370 (40.00%), Postives = 209/370 (56.49%), Query Frame = 1


Query: 4   GMETSIMAT-DAVEFIDVSVPSSSLRDGAI--TSVAPPACTSF--TEDHASCAVVGDPPT 63
           GME  +    + V++I++SVPS S+   +I   S     C     +ED+AS +V+G+P  
Sbjct: 11  GMEVPVAGGGNVVKWIEISVPSPSVSSSSIGANSSEDNECVQLPLSEDYASSSVIGEPSI 70

Query: 64  YLIWRIRKIRPHVVELLQFSTANEFRRIGLRIAFPETLHPAVFVCTNEPVGIFRRIIYGR 123
             +WRI K  P+ +ELLQ S  + F   GLR  F +TL P  FV  +E  G   R++Y  
Sbjct: 71  SFVWRINKTSPNALELLQLSAKSGFPITGLRFVFAQTLSPFAFVYADEG-GDSGRLVY-- 130

Query: 124 VTLQISSSTGHPFLMYAVTSSGIAYCLKLRNVSSYISCSVIPLDEVVEFNLHTHPDSKPV 183
                         +Y++T SG+ Y LKL N  +Y S SV PLD ++  ++  + +   V
Sbjct: 131 -------------FLYSLTPSGVVYVLKLSNTLAYKSGSVFPLDHLIHLDVRPYLNESRV 190

Query: 184 TSVSAISGCLVIGRHDGSVSCFKLGSLDQHSPGFQHELRDDSGFNRLLGFISRVKLAGAV 243
           TSV+A  G + +GR DG VSCF+     Q S GF  ELRDD+GF RL        +  AV
Sbjct: 191 TSVAASPGFIFLGRSDGCVSCFQPIVYFQKSSGFHQELRDDTGFGRL------GTVVAAV 250

Query: 244 HDMVISEVCGRQFLFVLHSDGVLRVWDLSCHSRVLNHSMNIATMAEAKFVRLWVGQGSID 303
            D+ ISEV GR +L VLH+DG LRVWD+  +SRVL  S+    +     VRLW+G+   D
Sbjct: 251 QDLFISEVHGRNYLCVLHADGALRVWDILTYSRVLCQSIAAKNLEGVMCVRLWLGKADYD 310

Query: 304 TSTMPLAILY-KHPDHSLEMINIYRLHFSWGDRVSLLLEPSTHNIPFNQGGCLDVKLASD 363
           +  +PLA+LY K  + S+++I +Y LHFS  + ++L L+    NIP  +G   DV+  SD
Sbjct: 311 SGIIPLAVLYRKSMNDSMDVITVYGLHFSSAEGIALSLDSGLQNIPLEEGELRDVRFTSD 358

Query: 364 KIWILKDNTL 368
           KIW LK N L
Sbjct: 371 KIWTLKANEL 358

[Close]

BLAST of Cp4.1LG13g00170 vs. NCBI nr
Match: gi|659114714|ref|XP_008457194.1| (PREDICTED: nuclear pore complex protein NUP160 homolog isoform X3 [Cucumis melo])

HSP 1 Score: 613.2 bits (1580), Expect = 3.0e-172
Identity = 307/376 (81.65%), Postives = 325/376 (86.44%), Query Frame = 1


Query: 4   GMETSIMATDAVEFIDVSVPSSSLRDGAITSVAPPACTSFTEDHASCAVVGDPPTYLIWR 63
           GMETS+MA D+VEFI VSVPSSS RD +ITSVA  A TS TEDHASC VVGDPPTYLIW 
Sbjct: 9   GMETSVMANDSVEFIGVSVPSSSSRDASITSVASQATTSLTEDHASCVVVGDPPTYLIWS 68

Query: 64  IRKIRPHVVELLQFSTANEFRRIGLRIAFPETLHPAVFVCTNEPVGIFRRIIYGRVTLQI 123
           IRKI PHVVELL+FST+NEFRRIGLRIAFPETLHPAVFVC NE                I
Sbjct: 69  IRKILPHVVELLEFSTSNEFRRIGLRIAFPETLHPAVFVCKNE----------------I 128

Query: 124 SSSTGHPFLMYAVTSSGIAYCLKLRNVSSYISCSVIPLDEVVEFNLHTHPDSKPVTSVSA 183
           SSS GHPFLMYAVTSSG AYCLKLRN+SSY+S S IPLDEVVEFNL THPD+KPVTSVSA
Sbjct: 129 SSSMGHPFLMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSA 188

Query: 184 ISGCLVIGRHDGSVSCFKLGSLDQHSPGFQHELRDDSGFNRLLGFISRVKLAGAVHDMVI 243
           ISGCLVIGR+DGSVSC+KLGSLDQH+PGF+HELRDDSGFNRLLGFISRVKLAGAV DMVI
Sbjct: 189 ISGCLVIGRNDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISRVKLAGAVQDMVI 248

Query: 244 SEVCGRQFLFVLHSDGVLRVWDLSCHSRVLNHSMNIATMAEAKFVRLWVGQGSIDTSTMP 303
           SEVCGRQFLFVLHSDG LRVWDLSCHSRVLNHSMNIATMAEA+F RLWVGQ + D ST+ 
Sbjct: 249 SEVCGRQFLFVLHSDGNLRVWDLSCHSRVLNHSMNIATMAEARFARLWVGQANTDKSTIS 308

Query: 304 LAILYKHP-DHSLEMINIYRLHFSWGDRVSLLLEPSTHNIPFNQGGCLDVKLASDKIWIL 363
           LAILYKHP D SLE I IY L FSWGDRVSLLLEPSTH+IP NQGGCLDVKLA DKIW+L
Sbjct: 309 LAILYKHPEDLSLETIYIYSLRFSWGDRVSLLLEPSTHSIPLNQGGCLDVKLAYDKIWVL 368

Query: 364 KDNTLIFLDLFPSDGH 379
           KDN LIFLDL  S+GH
Sbjct: 369 KDNALIFLDLLASNGH 368

[Close]

BLAST of Cp4.1LG13g00170 vs. NCBI nr
Match: gi|659114716|ref|XP_008457195.1| (PREDICTED: nuclear pore complex protein NUP160 homolog isoform X4 [Cucumis melo])

HSP 1 Score: 613.2 bits (1580), Expect = 3.0e-172
Identity = 307/376 (81.65%), Postives = 325/376 (86.44%), Query Frame = 1


Query: 4   GMETSIMATDAVEFIDVSVPSSSLRDGAITSVAPPACTSFTEDHASCAVVGDPPTYLIWR 63
           GMETS+MA D+VEFI VSVPSSS RD +ITSVA  A TS TEDHASC VVGDPPTYLIW 
Sbjct: 9   GMETSVMANDSVEFIGVSVPSSSSRDASITSVASQATTSLTEDHASCVVVGDPPTYLIWS 68

Query: 64  IRKIRPHVVELLQFSTANEFRRIGLRIAFPETLHPAVFVCTNEPVGIFRRIIYGRVTLQI 123
           IRKI PHVVELL+FST+NEFRRIGLRIAFPETLHPAVFVC NE                I
Sbjct: 69  IRKILPHVVELLEFSTSNEFRRIGLRIAFPETLHPAVFVCKNE----------------I 128

Query: 124 SSSTGHPFLMYAVTSSGIAYCLKLRNVSSYISCSVIPLDEVVEFNLHTHPDSKPVTSVSA 183
           SSS GHPFLMYAVTSSG AYCLKLRN+SSY+S S IPLDEVVEFNL THPD+KPVTSVSA
Sbjct: 129 SSSMGHPFLMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSA 188

Query: 184 ISGCLVIGRHDGSVSCFKLGSLDQHSPGFQHELRDDSGFNRLLGFISRVKLAGAVHDMVI 243
           ISGCLVIGR+DGSVSC+KLGSLDQH+PGF+HELRDDSGFNRLLGFISRVKLAGAV DMVI
Sbjct: 189 ISGCLVIGRNDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISRVKLAGAVQDMVI 248

Query: 244 SEVCGRQFLFVLHSDGVLRVWDLSCHSRVLNHSMNIATMAEAKFVRLWVGQGSIDTSTMP 303
           SEVCGRQFLFVLHSDG LRVWDLSCHSRVLNHSMNIATMAEA+F RLWVGQ + D ST+ 
Sbjct: 249 SEVCGRQFLFVLHSDGNLRVWDLSCHSRVLNHSMNIATMAEARFARLWVGQANTDKSTIS 308

Query: 304 LAILYKHP-DHSLEMINIYRLHFSWGDRVSLLLEPSTHNIPFNQGGCLDVKLASDKIWIL 363
           LAILYKHP D SLE I IY L FSWGDRVSLLLEPSTH+IP NQGGCLDVKLA DKIW+L
Sbjct: 309 LAILYKHPEDLSLETIYIYSLRFSWGDRVSLLLEPSTHSIPLNQGGCLDVKLAYDKIWVL 368

Query: 364 KDNTLIFLDLFPSDGH 379
           KDN LIFLDL  S+GH
Sbjct: 369 KDNALIFLDLLASNGH 368

[Close]

BLAST of Cp4.1LG13g00170 vs. NCBI nr
Match: gi|659114718|ref|XP_008457197.1| (PREDICTED: nuclear pore complex protein NUP160 homolog isoform X5 [Cucumis melo])

HSP 1 Score: 613.2 bits (1580), Expect = 3.0e-172
Identity = 307/376 (81.65%), Postives = 325/376 (86.44%), Query Frame = 1


Query: 4   GMETSIMATDAVEFIDVSVPSSSLRDGAITSVAPPACTSFTEDHASCAVVGDPPTYLIWR 63
           GMETS+MA D+VEFI VSVPSSS RD +ITSVA  A TS TEDHASC VVGDPPTYLIW 
Sbjct: 9   GMETSVMANDSVEFIGVSVPSSSSRDASITSVASQATTSLTEDHASCVVVGDPPTYLIWS 68

Query: 64  IRKIRPHVVELLQFSTANEFRRIGLRIAFPETLHPAVFVCTNEPVGIFRRIIYGRVTLQI 123
           IRKI PHVVELL+FST+NEFRRIGLRIAFPETLHPAVFVC NE                I
Sbjct: 69  IRKILPHVVELLEFSTSNEFRRIGLRIAFPETLHPAVFVCKNE----------------I 128

Query: 124 SSSTGHPFLMYAVTSSGIAYCLKLRNVSSYISCSVIPLDEVVEFNLHTHPDSKPVTSVSA 183
           SSS GHPFLMYAVTSSG AYCLKLRN+SSY+S S IPLDEVVEFNL THPD+KPVTSVSA
Sbjct: 129 SSSMGHPFLMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSA 188

Query: 184 ISGCLVIGRHDGSVSCFKLGSLDQHSPGFQHELRDDSGFNRLLGFISRVKLAGAVHDMVI 243
           ISGCLVIGR+DGSVSC+KLGSLDQH+PGF+HELRDDSGFNRLLGFISRVKLAGAV DMVI
Sbjct: 189 ISGCLVIGRNDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISRVKLAGAVQDMVI 248

Query: 244 SEVCGRQFLFVLHSDGVLRVWDLSCHSRVLNHSMNIATMAEAKFVRLWVGQGSIDTSTMP 303
           SEVCGRQFLFVLHSDG LRVWDLSCHSRVLNHSMNIATMAEA+F RLWVGQ + D ST+ 
Sbjct: 249 SEVCGRQFLFVLHSDGNLRVWDLSCHSRVLNHSMNIATMAEARFARLWVGQANTDKSTIS 308

Query: 304 LAILYKHP-DHSLEMINIYRLHFSWGDRVSLLLEPSTHNIPFNQGGCLDVKLASDKIWIL 363
           LAILYKHP D SLE I IY L FSWGDRVSLLLEPSTH+IP NQGGCLDVKLA DKIW+L
Sbjct: 309 LAILYKHPEDLSLETIYIYSLRFSWGDRVSLLLEPSTHSIPLNQGGCLDVKLAYDKIWVL 368

Query: 364 KDNTLIFLDLFPSDGH 379
           KDN LIFLDL  S+GH
Sbjct: 369 KDNALIFLDLLASNGH 368

[Close]

BLAST of Cp4.1LG13g00170 vs. NCBI nr
Match: gi|659114710|ref|XP_008457192.1| (PREDICTED: nuclear pore complex protein NUP160 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 613.2 bits (1580), Expect = 3.0e-172
Identity = 307/376 (81.65%), Postives = 325/376 (86.44%), Query Frame = 1


Query: 4   GMETSIMATDAVEFIDVSVPSSSLRDGAITSVAPPACTSFTEDHASCAVVGDPPTYLIWR 63
           GMETS+MA D+VEFI VSVPSSS RD +ITSVA  A TS TEDHASC VVGDPPTYLIW 
Sbjct: 9   GMETSVMANDSVEFIGVSVPSSSSRDASITSVASQATTSLTEDHASCVVVGDPPTYLIWS 68

Query: 64  IRKIRPHVVELLQFSTANEFRRIGLRIAFPETLHPAVFVCTNEPVGIFRRIIYGRVTLQI 123
           IRKI PHVVELL+FST+NEFRRIGLRIAFPETLHPAVFVC NE                I
Sbjct: 69  IRKILPHVVELLEFSTSNEFRRIGLRIAFPETLHPAVFVCKNE----------------I 128

Query: 124 SSSTGHPFLMYAVTSSGIAYCLKLRNVSSYISCSVIPLDEVVEFNLHTHPDSKPVTSVSA 183
           SSS GHPFLMYAVTSSG AYCLKLRN+SSY+S S IPLDEVVEFNL THPD+KPVTSVSA
Sbjct: 129 SSSMGHPFLMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSA 188

Query: 184 ISGCLVIGRHDGSVSCFKLGSLDQHSPGFQHELRDDSGFNRLLGFISRVKLAGAVHDMVI 243
           ISGCLVIGR+DGSVSC+KLGSLDQH+PGF+HELRDDSGFNRLLGFISRVKLAGAV DMVI
Sbjct: 189 ISGCLVIGRNDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISRVKLAGAVQDMVI 248

Query: 244 SEVCGRQFLFVLHSDGVLRVWDLSCHSRVLNHSMNIATMAEAKFVRLWVGQGSIDTSTMP 303
           SEVCGRQFLFVLHSDG LRVWDLSCHSRVLNHSMNIATMAEA+F RLWVGQ + D ST+ 
Sbjct: 249 SEVCGRQFLFVLHSDGNLRVWDLSCHSRVLNHSMNIATMAEARFARLWVGQANTDKSTIS 308

Query: 304 LAILYKHP-DHSLEMINIYRLHFSWGDRVSLLLEPSTHNIPFNQGGCLDVKLASDKIWIL 363
           LAILYKHP D SLE I IY L FSWGDRVSLLLEPSTH+IP NQGGCLDVKLA DKIW+L
Sbjct: 309 LAILYKHPEDLSLETIYIYSLRFSWGDRVSLLLEPSTHSIPLNQGGCLDVKLAYDKIWVL 368

Query: 364 KDNTLIFLDLFPSDGH 379
           KDN LIFLDL  S+GH
Sbjct: 369 KDNALIFLDLLASNGH 368

[Close]

BLAST of Cp4.1LG13g00170 vs. NCBI nr
Match: gi|778668507|ref|XP_011649108.1| (PREDICTED: nuclear pore complex protein NUP160 isoform X3 [Cucumis sativus])

HSP 1 Score: 612.1 bits (1577), Expect = 6.7e-172
Identity = 308/376 (81.91%), Postives = 323/376 (85.90%), Query Frame = 1


Query: 4   GMETSIMATDAVEFIDVSVPSSSLRDGAITSVAPPACTSFTEDHASCAVVGDPPTYLIWR 63
           GMETSIMATD+VEFI VSVPSSS R+ AITSVA  A TS TEDH SC VVGDPPTYLIWR
Sbjct: 9   GMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGDPPTYLIWR 68

Query: 64  IRKIRPHVVELLQFSTANEFRRIGLRIAFPETLHPAVFVCTNEPVGIFRRIIYGRVTLQI 123
           IRKI PHVVELL+FST+NEF R GLRIAFPETLHPAVFVC NE                I
Sbjct: 69  IRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNE----------------I 128

Query: 124 SSSTGHPFLMYAVTSSGIAYCLKLRNVSSYISCSVIPLDEVVEFNLHTHPDSKPVTSVSA 183
           SSS GHPFLMYAVTSSG AYCLKLRN+SSY+S S IPLDEVVEFNL THPD+KPVTSVSA
Sbjct: 129 SSSMGHPFLMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSA 188

Query: 184 ISGCLVIGRHDGSVSCFKLGSLDQHSPGFQHELRDDSGFNRLLGFISRVKLAGAVHDMVI 243
           ISGCLVIGR+DGSVSC+KLGSLDQHSPGF+HELRDDSGFNRLLGFISRVKLAGAV DMVI
Sbjct: 189 ISGCLVIGRNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISRVKLAGAVQDMVI 248

Query: 244 SEVCGRQFLFVLHSDGVLRVWDLSCHSRVLNHSMNIATMAEAKFVRLWVGQGSIDTSTMP 303
           SEVCGRQFLFVLHSDG LRVWDLSCHSRV NHSMNIATMAEA+FVRLWVGQ + D ST+ 
Sbjct: 249 SEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEARFVRLWVGQANTDKSTIS 308

Query: 304 LAILYKHP-DHSLEMINIYRLHFSWGDRVSLLLEPSTHNIPFNQGGCLDVKLASDKIWIL 363
           LAILY HP D SLE I IY L FSWGDRVSLLLEPSTH+IP NQGGCLDVKLA DKIW+L
Sbjct: 309 LAILYNHPEDLSLETIYIYSLRFSWGDRVSLLLEPSTHSIPLNQGGCLDVKLAYDKIWVL 368

Query: 364 KDNTLIFLDLFPSDGH 379
           KDN LIFLDL  SDGH
Sbjct: 369 KDNALIFLDLLASDGH 368

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g00170 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NU160_ARATH	2.9e-66	40.00	Nuclear pore complex protein NUP160 OS=Arabidopsis thaliana GN=NUP160 PE=1 SV=2	[more]

BLAST of Cp4.1LG13g00170 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLC2_CUCSA	4.7e-172	81.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G150000 PE=4 SV=1	[more]
A0A072VL71_MEDTR	1.7e-97	48.23	Suppressor of auxin resistance 1 protein OS=Medicago truncatula GN=MTR_1g063180 ...	[more]
A0A072VJG2_MEDTR	1.7e-97	48.23	Suppressor of auxin resistance 1 protein OS=Medicago truncatula GN=MTR_1g063180 ...	[more]
K7LZQ2_SOYBN	2.1e-95	50.27	Uncharacterized protein OS=Glycine max GN=GLYMA_13G142200 PE=4 SV=1	[more]
I1L8X8_SOYBN	1.5e-90	47.97	Uncharacterized protein OS=Glycine max GN=GLYMA_10G055100 PE=4 SV=2	[more]

BLAST of Cp4.1LG13g00170 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G33410.1	1.6e-67	40.00	SUPPRESSOR OF AUXIN RESISTANCE1	[more]

BLAST of Cp4.1LG13g00170 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114714\|ref\|XP_008457194.1\|	3.0e-172	81.65	PREDICTED: nuclear pore complex protein NUP160 homolog isoform X3 [Cucumis melo]	[more]
gi\|659114716\|ref\|XP_008457195.1\|	3.0e-172	81.65	PREDICTED: nuclear pore complex protein NUP160 homolog isoform X4 [Cucumis melo]	[more]
gi\|659114718\|ref\|XP_008457197.1\|	3.0e-172	81.65	PREDICTED: nuclear pore complex protein NUP160 homolog isoform X5 [Cucumis melo]	[more]
gi\|659114710\|ref\|XP_008457192.1\|	3.0e-172	81.65	PREDICTED: nuclear pore complex protein NUP160 homolog isoform X1 [Cucumis melo]	[more]
gi\|778668507\|ref\|XP_011649108.1\|	6.7e-172	81.91	PREDICTED: nuclear pore complex protein NUP160 isoform X3 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR017986	WD40_repeat_dom
IPR015943	WD40/YVTN_repeat-like_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g00170.1	Cp4.1LG13g00170.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	G3DSA:2.130.10.10		coord: 163..270 score: 7.
IPR017986	WD40-repeat-containing domain	unknown	SSF50978	WD40 repeat-like	coord: 37..66 score: 2.38E-8coord: 105..315 score: 2.3
None	No IPR available	PFAM	PF11715	Nup160	coord: 60..366 score: 7.1

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG13g00170	Melon (DHL92) v3.6.1	cpemedB209
Cp4.1LG13g00170	Silver-seed gourd	carcpeB1040
Cp4.1LG13g00170	Wax gourd	cpewgoB0223
Cp4.1LG13g00170	Cucurbita maxima (Rimu)	cmacpeB306
Cp4.1LG13g00170	Cucurbita moschata (Rifu)	cmocpeB269
Cp4.1LG13g00170	Bottle gourd (USVL1VR-Ls)	cpelsiB132
Cp4.1LG13g00170	Melon (DHL92) v3.5.1	cpemeB174