Cp4.1LG12g11630 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g11630
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBnaA05g17230D protein
LocationCp4.1LG12 : 8601196 .. 8601501 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATGGTTCAGATCGCTCCTCGTTTCGCCATTGAAGAAGCTCTGGGTTCGTCTGCACTCCCCTCATAGAAACCGTAACCATTCCATTCCATCATCATCATCATCTCTCTTTTGTTTGGTCGGAATTATCACCGGCCGACCGCCGTCTAACTCCGATGAAGTTTTGCTGTTTTTGGATGTAGGGAAAGGGATCTACATTTTGTATAAAGATGTCAAGTCTTGCCCTTGTGAAGATGTCCAGATGCTTTGGTCCATTCTCGTCGAGGCCGGTAGCTCCTCCTCTCACCCGCCATCGCCGCCGTGA

mRNA sequence

ATGGGATGGTTCAGATCGCTCCTCGTTTCGCCATTGAAGAAGCTCTGGGTTCGTCTGCACTCCCCTCATAGAAACCGTAACCATTCCATTCCATCATCATCATCATCTCTCTTTTGTTTGGTCGGAATTATCACCGGCCGACCGCCGTCTAACTCCGATGAAGTTTTGCTGTTTTTGGATGTAGGGAAAGGGATCTACATTTTGTATAAAGATGTCAAGTCTTGCCCTTGTGAAGATGTCCAGATGCTTTGGTCCATTCTCGTCGAGGCCGGTAGCTCCTCCTCTCACCCGCCATCGCCGCCGTGA

Coding sequence (CDS)

ATGGGATGGTTCAGATCGCTCCTCGTTTCGCCATTGAAGAAGCTCTGGGTTCGTCTGCACTCCCCTCATAGAAACCGTAACCATTCCATTCCATCATCATCATCATCTCTCTTTTGTTTGGTCGGAATTATCACCGGCCGACCGCCGTCTAACTCCGATGAAGTTTTGCTGTTTTTGGATGTAGGGAAAGGGATCTACATTTTGTATAAAGATGTCAAGTCTTGCCCTTGTGAAGATGTCCAGATGCTTTGGTCCATTCTCGTCGAGGCCGGTAGCTCCTCCTCTCACCCGCCATCGCCGCCGTGA

Protein sequence

MGWFRSLLVSPLKKLWVRLHSPHRNRNHSIPSSSSSLFCLVGIITGRPPSNSDEVLLFLDVGKGIYILYKDVKSCPCEDVQMLWSILVEAGSSSSHPPSPP
Homology
[Close]
BLAST of Cp4.1LG12g11630 vs. TrEMBL
Match: A0A0A0K7C3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G388370 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.4e-13
Identity = 47/101 (46.53%), Postives = 53/101 (52.48%), Query Frame = 1 

Query: 1   MGWFRSLLVSPLKKLWVRLHSPHRNRNHSIPSSSSSLFCLVGIITGRPPSNSDEVLLFLD 60
           MGWF+S L+SP KKLW RLH                            P  S+       
Sbjct: 1   MGWFKSFLISPFKKLWDRLH---------------------------SPHKSNR------ 60

Query: 61  VGKGIYILYKDVKSCPCEDVQMLWSILVEAGSSSSHPPSPP 102
             KGIYILYKDVKSCPCEDVQMLWSILV++ S    PP+ P
Sbjct: 61  --KGIYILYKDVKSCPCEDVQMLWSILVQSAS----PPNSP 62

[Close]
BLAST of Cp4.1LG12g11630 vs. TrEMBL
Match: W9QVP0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025085 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-11
Identity = 46/96 (47.92%), Postives = 52/96 (54.17%), Query Frame = 1 

Query: 1  MGWFRSLLVSPLKKLWVRLHSPHRNRNHSIPSSSSSLFCLVGIITGRPPSNSDEVLLFLD 60
          MGW RSL VSPLKK+W RL     + NH                                
Sbjct: 1  MGWLRSL-VSPLKKIWDRL-----HSNHR------------------------------- 59

Query: 61 VGKGIYILYKDVKSCPCEDVQMLWSILVEAGSSSSH 97
            +GIYILYKDVKSCPCEDVQ+LWSILVE+G+SS H
Sbjct: 61 KRRGIYILYKDVKSCPCEDVQVLWSILVESGTSSLH 59

[Close]
BLAST of Cp4.1LG12g11630 vs. TrEMBL
Match: A0A067FZ56_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035399mg PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.3e-09
Identity = 40/89 (44.94%), Postives = 44/89 (49.44%), Query Frame = 1 

Query: 2  GWFRSLLVSPLKKLWVRLHSPHRNRNHSIPSSSSSLFCLVGIITGRPPSNSDEVLLFLDV 61
          GW  SL+VSPLKKLW RLHS HR R          L+ L                     
Sbjct: 3  GWLHSLVVSPLKKLWDRLHSSHRRRR--------GLYILY-------------------- 55

Query: 62 GKGIYILYKDVKSCPCEDVQMLWSILVEA 91
                  KDVKSCPCEDVQ+LWSILVE+
Sbjct: 63 --------KDVKSCPCEDVQVLWSILVES 55

[Close]
BLAST of Cp4.1LG12g11630 vs. TrEMBL
Match: I3STY4_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_7g095120 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 8.7e-09
Identity = 40/97 (41.24%), Postives = 51/97 (52.58%), Query Frame = 1 

Query: 1  MGWFRSLLVSPLKKLWVRLHSPHRNRNHSIPSSSSSLFCLVGIITGRPPSNSDEVLLFLD 60
          MGW +SLL  PLKKLW+R+HS ++ R          L+ L                    
Sbjct: 1  MGWLQSLLC-PLKKLWLRIHSTNKRRR--------GLYILY------------------- 60

Query: 61 VGKGIYILYKDVKSCPCEDVQMLWSILVEAGSSSSHP 98
                   KDVKSCPCEDVQ+LWSILVE+G++S+ P
Sbjct: 61 ---------KDVKSCPCEDVQVLWSILVESGAASTLP 60

[Close]
BLAST of Cp4.1LG12g11630 vs. TrEMBL
Match: A0A096QGY2_MAIZE (Uncharacterized protein OS=Zea mays PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.5e-08
Identity = 43/96 (44.79%), Postives = 49/96 (51.04%), Query Frame = 1 

Query: 3  WFRSLLVSPLKKLWVRLHSPHRNRNHSIPSSSSSLFCLVGIITGRPPSNSDEVLLFLDVG 62
          W RSLL SPL+KLW         R HS  +                             G
Sbjct: 4  WMRSLL-SPLRKLW--------IRMHSAQNKK---------------------------G 61

Query: 63 KGIYILYKDVKSCPCEDVQMLWSILVEAGSSSSHPP 99
          +GIYILY+DVKSCPCEDV +LWSILV+  SS SHPP
Sbjct: 64 RGIYILYEDVKSCPCEDVHILWSILVD--SSHSHPP 61

[Close]
BLAST of Cp4.1LG12g11630 vs. NCBI nr
Match: gi|700189571|gb|KGN44804.1| (hypothetical protein Csa_7G388370 [Cucumis sativus])

HSP 1 Score: 82.4 bits (202), Expect = 4.9e-13
Identity = 47/101 (46.53%), Postives = 53/101 (52.48%), Query Frame = 1 

Query: 1   MGWFRSLLVSPLKKLWVRLHSPHRNRNHSIPSSSSSLFCLVGIITGRPPSNSDEVLLFLD 60
           MGWF+S L+SP KKLW RLH                            P  S+       
Sbjct: 1   MGWFKSFLISPFKKLWDRLH---------------------------SPHKSNR------ 60

Query: 61  VGKGIYILYKDVKSCPCEDVQMLWSILVEAGSSSSHPPSPP 102
             KGIYILYKDVKSCPCEDVQMLWSILV++ S    PP+ P
Sbjct: 61  --KGIYILYKDVKSCPCEDVQMLWSILVQSAS----PPNSP 62

[Close]
BLAST of Cp4.1LG12g11630 vs. NCBI nr
Match: gi|703076766|ref|XP_010090418.1| (hypothetical protein L484_025085 [Morus notabilis])

HSP 1 Score: 77.4 bits (189), Expect = 1.6e-11
Identity = 46/96 (47.92%), Postives = 52/96 (54.17%), Query Frame = 1 

Query: 1  MGWFRSLLVSPLKKLWVRLHSPHRNRNHSIPSSSSSLFCLVGIITGRPPSNSDEVLLFLD 60
          MGW RSL VSPLKK+W RL     + NH                                
Sbjct: 1  MGWLRSL-VSPLKKIWDRL-----HSNHR------------------------------- 59

Query: 61 VGKGIYILYKDVKSCPCEDVQMLWSILVEAGSSSSH 97
            +GIYILYKDVKSCPCEDVQ+LWSILVE+G+SS H
Sbjct: 61 KRRGIYILYKDVKSCPCEDVQVLWSILVESGTSSLH 59

[Close]
BLAST of Cp4.1LG12g11630 vs. NCBI nr
Match: gi|641849823|gb|KDO68697.1| (hypothetical protein CISIN_1g035399mg [Citrus sinensis])

HSP 1 Score: 69.7 bits (169), Expect = 3.3e-09
Identity = 40/89 (44.94%), Postives = 44/89 (49.44%), Query Frame = 1 

Query: 2  GWFRSLLVSPLKKLWVRLHSPHRNRNHSIPSSSSSLFCLVGIITGRPPSNSDEVLLFLDV 61
          GW  SL+VSPLKKLW RLHS HR R          L+ L                     
Sbjct: 3  GWLHSLVVSPLKKLWDRLHSSHRRRR--------GLYILY-------------------- 55

Query: 62 GKGIYILYKDVKSCPCEDVQMLWSILVEA 91
                  KDVKSCPCEDVQ+LWSILVE+
Sbjct: 63 --------KDVKSCPCEDVQVLWSILVES 55

[Close]
BLAST of Cp4.1LG12g11630 vs. NCBI nr
Match: gi|922345675|ref|XP_013449752.1| (hypothetical protein MTR_7g095120 [Medicago truncatula])

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-08
Identity = 40/97 (41.24%), Postives = 51/97 (52.58%), Query Frame = 1 

Query: 1  MGWFRSLLVSPLKKLWVRLHSPHRNRNHSIPSSSSSLFCLVGIITGRPPSNSDEVLLFLD 60
          MGW +SLL  PLKKLW+R+HS ++ R          L+ L                    
Sbjct: 1  MGWLQSLLC-PLKKLWLRIHSTNKRRR--------GLYILY------------------- 60

Query: 61 VGKGIYILYKDVKSCPCEDVQMLWSILVEAGSSSSHP 98
                   KDVKSCPCEDVQ+LWSILVE+G++S+ P
Sbjct: 61 ---------KDVKSCPCEDVQVLWSILVESGAASTLP 60

[Close]
BLAST of Cp4.1LG12g11630 vs. NCBI nr
Match: gi|414590598|tpg|DAA41169.1| (TPA: hypothetical protein ZEAMMB73_469504 [Zea mays])

HSP 1 Score: 67.0 bits (162), Expect = 2.1e-08
Identity = 43/96 (44.79%), Postives = 49/96 (51.04%), Query Frame = 1 

Query: 3  WFRSLLVSPLKKLWVRLHSPHRNRNHSIPSSSSSLFCLVGIITGRPPSNSDEVLLFLDVG 62
          W RSLL SPL+KLW         R HS  +                             G
Sbjct: 4  WMRSLL-SPLRKLW--------IRMHSAQNKK---------------------------G 61

Query: 63 KGIYILYKDVKSCPCEDVQMLWSILVEAGSSSSHPP 99
          +GIYILY+DVKSCPCEDV +LWSILV+  SS SHPP
Sbjct: 64 RGIYILYEDVKSCPCEDVHILWSILVD--SSHSHPP 61

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g11630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG12g11630 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7C3_CUCSA3.4e-1346.53Uncharacterized protein OS=Cucumis sativus GN=Csa_7G388370 PE=4 SV=1[more]
W9QVP0_9ROSA1.1e-1147.92Uncharacterized protein OS=Morus notabilis GN=L484_025085 PE=4 SV=1[more]
A0A067FZ56_CITSI2.3e-0944.94Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035399mg PE=4 SV=1[more]
I3STY4_MEDTR8.7e-0941.24Uncharacterized protein OS=Medicago truncatula GN=MTR_7g095120 PE=2 SV=1[more]
A0A096QGY2_MAIZE1.5e-0844.79Uncharacterized protein OS=Zea mays PE=4 SV=1[more]
BLAST of Cp4.1LG12g11630 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG12g11630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189571|gb|KGN44804.1|4.9e-1346.53hypothetical protein Csa_7G388370 [Cucumis sativus][more]
gi|703076766|ref|XP_010090418.1|1.6e-1147.92hypothetical protein L484_025085 [Morus notabilis][more]
gi|641849823|gb|KDO68697.1|3.3e-0944.94hypothetical protein CISIN_1g035399mg [Citrus sinensis][more]
gi|922345675|ref|XP_013449752.1|1.3e-0841.24hypothetical protein MTR_7g095120 [Medicago truncatula][more]
gi|414590598|tpg|DAA41169.1|2.1e-0844.79TPA: hypothetical protein ZEAMMB73_469504 [Zea mays][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0016310 phosphorylation
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003674 molecular_function
molecular_function GO:0016301 kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g11630.1Cp4.1LG12g11630.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33181FAMILY NOT NAMEDcoord: 1..33
score: 7.4E-26coord: 65..92
score: 7.4
NoneNo IPR availablePANTHERPTHR33181:SF3SUBFAMILY NOT NAMEDcoord: 65..92
score: 7.4E-26coord: 1..33
score: 7.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g11630Cucsa.084390Cucumber (Gy14) v1cgycpeB0151
Cp4.1LG12g11630CmoCh17G011620Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g11630Csa7G388370Cucumber (Chinese Long) v2cpecuB161
Cp4.1LG12g11630CsaV3_3G013360Cucumber (Chinese Long) v3cpecucB0159
Cp4.1LG12g11630CsaV3_7G028010Cucumber (Chinese Long) v3cpecucB0189
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g11630Cp4.1LG03g10810Cucurbita pepo (Zucchini)cpecpeB183
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g11630Cucurbita pepo (Zucchini)cpecpeB157
Cp4.1LG12g11630Cucurbita pepo (Zucchini)cpecpeB168
Cp4.1LG12g11630Cucurbita pepo (Zucchini)cpecpeB192
Cp4.1LG12g11630Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g11630Cucurbita maxima (Rimu)cmacpeB520
Cp4.1LG12g11630Cucurbita maxima (Rimu)cmacpeB900
Cp4.1LG12g11630Cucurbita maxima (Rimu)cmacpeB902
Cp4.1LG12g11630Cucurbita moschata (Rifu)cmocpeB479
Cp4.1LG12g11630Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g11630Wild cucumber (PI 183967)cpecpiB163
Cp4.1LG12g11630Bottle gourd (USVL1VR-Ls)cpelsiB113
Cp4.1LG12g11630Bottle gourd (USVL1VR-Ls)cpelsiB119
Cp4.1LG12g11630Watermelon (Charleston Gray)cpewcgB126
Cp4.1LG12g11630Watermelon (Charleston Gray)cpewcgB147
Cp4.1LG12g11630Watermelon (97103) v1cpewmB131
Cp4.1LG12g11630Watermelon (97103) v1cpewmB150
Cp4.1LG12g11630Melon (DHL92) v3.5.1cpemeB119
Cp4.1LG12g11630Melon (DHL92) v3.5.1cpemeB124
Cp4.1LG12g11630Cucumber (Gy14) v2cgybcpeB310
Cp4.1LG12g11630Cucumber (Gy14) v2cgybcpeB906
Cp4.1LG12g11630Melon (DHL92) v3.6.1cpemedB151
Cp4.1LG12g11630Melon (DHL92) v3.6.1cpemedB171
Cp4.1LG12g11630Silver-seed gourdcarcpeB0076
Cp4.1LG12g11630Silver-seed gourdcarcpeB0100
Cp4.1LG12g11630Silver-seed gourdcarcpeB0158
Cp4.1LG12g11630Silver-seed gourdcarcpeB0451
Cp4.1LG12g11630Wax gourdcpewgoB0197
Cp4.1LG12g11630Wax gourdcpewgoB0203
Cp4.1LG12g11630Wax gourdcpewgoB0212