Cp4.1LG12g11360 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g11360
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBasic helix-loop-helix transcription factor
LocationCp4.1LG12 : 8773170 .. 8776428 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGGATAAAGCTTCCTTCTTTTTCGTCTCTGTAGAACTGAACTGAAACCAAGAACTTACGGACACAGAGGCAGAGAGGTAGAAGGTTCAAGAAGATCGAGCTCAAAATTGAGCTTCCTCTCACTACAAAATCACGAAGCTCAAAATCATCGACTTCTATTTTCCTTCTTCCTCTTGCATGTAGATGCTATTTGAAACCGCCGTTCTGTTCTTAATCCATTGGTTTCGCCTCGCTCGACTTCAATTCCATGGCGAACAATCATTCCGAGACTCCCTCCGATGATTTCCTAGAGCAGATTCTTGGGATTTCCCCTTTCGGTTCGGCGGAGCAAGGGTTAGCTGGAACCGACGGCGGATTGGCAGGAGCTGCTGCTGCGGCGGCTCACGGTCAGGCTCCGATGATGCTTCAACTTAGCTCCGGCGATGGCGGTGGCCACATCTCTACGATTGGAAGTGGAAGTGTCGGTGGTGCAGGGTTCCATGGCGGAACCCCTTTTCCTTTGGGGTTGAGCTTGGACCAAGGGAAGAGTGGGTTTCTTAAGGCTGAGGAAGCTTCTGGAAGTGGCAAGAGGTATTGTGGTGAGGTTGTTGATGTTCGAGCTTCATCTGTGAAAAATGTAAGTTCACGATTCTCTTTATTGTTGCTTCATATAGTTAAATCTATGTGCTGGTAGAGTTATGGTTGAATTACTGATGGAGTTATGCTTTCTCTTATGTGTTCATATGATTGTGTTCTTCTTGAAATAACATGAACTGCTATGATCACTTATGGCTGTGATGTTTCTGGTTTTTGGTGTCTTGCTTAAGAGAAACTGGAAATTACAGACAGTTCTGTTTGATGTATTGCCATTCTTTTGCTCTTGAGTCAGAGTGGATGCAGAGTATTTATTTCAGACATCTTTGGAGTGTTTGAATGCATTGAGTGACTCACTTTAAGCTTTTTGCAGGTTTATCAAGGCCAACAAATGCATGCTACTATGGGTGCAGCACCGCATCCACCAACGATGCGCCCTAGGGTACGAGCAAGACGAGGACAGGCGACTGATCCACATAGCATTGCAGAGCGGGTAAGATAGATGCCAGTTTTGGAAACCAGAAACGGTTCGCTGTTGCTAGATGATTATTGTATCAAAATATTATTGCAGCACTTGTAGGTTTCTTGAAGTAGTTTTCGTCGCTATTTATTTATTACAGTTACGAAGAGAAAGAATTGCAGAGAGAATCCGGGCTTTGCAGGAGCTTGTTCCGAGTGTCAATAAGGTGATTATCTATGATTTTAAGTCATTGAAATTATTGAGATGATTGTCTTGTTGTTTTTTTCAAGCTCTTGGCCCCACAACTTAGAAAACCTGGTGAAACATCAGACGATAAGGAATTTAAATGGTCTTAGCATATGGTGATTGTTCCCTACATAGTTAAGATCTTAATCGTCAATAGCTCGAATTACCCTTACAACTCGTATTCCCCTCGCCCATGTGAGGGCTCCCGTCAAATCATATCTAAGCATGAATGCGTTTTACCTCTAAAATTGGAAAATGAGTGGGTGGGGGGGGGGGGGGGGGNTGTTAATGTCTACTCTTCCACTTACTTTCGGCGATGCTCAAGTAGCCTATTGACCTGATTCTTAATTTCATTAATGTTTCCTGAATTAATTGCATCTGTTCTTCCATTCTTGGATACATAATCTTAGATTGATACTGATTTATTTTTCGTTTCAAGTAGATGGATAGAGCTGCAATGCTCGATGAAATAGTGGACTACGTAAAGTTTCTACGTCTCCAAGTAAAGGTGAAGTAATATTCCTTCTGACATTTTACCTGATAAGTTAGAACTTGCTGTTTAACATATATGAAGATTGTTTGTACATTCAATCCCTTTATTCTCTGGGTCGAATTGACCAATGTCTTAAATGTTTCTACTGAAGCAACAAAAGAAATCATTTTAGAGATCATATAGTCATAATCAAATTGAACTTATATTTCTTGTTAAACGAACTTGATCGTTCGAGTACTGTAGTCTGTAGAGCCAGTTAATTTCCAACTCCTTATGCAAGCGTATTTCACTCTTTAGATGGATTGAGGCAGCTAATAAACTTAAGAAGTATGGCTGTGGCTGTTATTTAAAGTGACTGCTTGTGTTCATAGTTCAAGTTTTGCCTGTTTTTCTCCCTCATTTTTCGGATGTAACAGTCACTTCTCATATCCTACTTTTTTAGGTATTTATCCAATGTTGCATTTATCAACTTTGCAGGTTTTAAGCATGAGTAGATTGGGTGGAGCTGGTGCGGTGGCACCACTTGTAACGGATATTCCACTATCATCAGTTGAGGTAATGAGATGAAAAACGAAATCTTTGACTTTAAAGTCTGTTTGATAGTGTTTTTACTTTTGGGGTTCTGTGGCTGCTTGATATCCGAAAACAAAATCGTTATGAAATGGGGTTGTATCTTGATGATTTGTTCTTGGTTACTATCCTTATTGCATCCTAGGAAGAAGGAAGTGAGGGTGGTAGGAACCAACCTGCGTGGGAGAAGTGGTCGAACGACGGTACTGAGAGACAAGTTGCGAAGCTTATGGAAGAAAACGTGGGTTCTGCGATGCAATTCCTTCAATCGAAGGCACTCTGCATCATGCCCATCTCATTGGCTTCGGCAATTTATCACACGCAACCGCCCGATAGCTCGAGCGTTGTGAAGCCAGAGAGTAATCCTCCTCCATAGAATCGCCACAATCCTTAAAGGAAAACAGGTAAAAAAAAAAGGGAAGAAAAGAGAAAATTTACGGATCGGTGTTGGGTCCATGGCTGCTTCTTGTCGTCGCAACACTCATGGTTGTTCCCCTTCACTTGTGGTGGGTATTGGTATTGCAATCAAAGTCAGATGCCATAGTTATATTGCTTTTTAAGATTACTTTTGTAGCTTTTGTCAAAACATGGATCAATGTCAATGCCCTAAAAGATGCAAGCAGGCCTTTCAGGTCTTGACAAGCTGAACTAAAGCAAGAAGAATTTGTCAAAGCTTTACTTGATATGCTCTTCTTTTCTTGTTTTTGCATCAATGGGTGGAGGGAGTGGTGGGATATGACCAAAGCACCTTTGTTATGTAGTGGGTTGTGGGACCCTGTAAAAATATGAATAAGAATTCTTCCTTTTTTTTGTGTATTTTAATTGGATGATGTACCTTTACAAGGAAATGCAGAAGTTTGAAATGGAGAGTAGTACTTAGTTTCAAAAAGAGGAAAAAATAAGGTTTAATTATAGAT

mRNA sequence

CAGGATAAAGCTTCCTTCTTTTTCGTCTCTGTAGAACTGAACTGAAACCAAGAACTTACGGACACAGAGGCAGAGAGGTAGAAGGTTCAAGAAGATCGAGCTCAAAATTGAGCTTCCTCTCACTACAAAATCACGAAGCTCAAAATCATCGACTTCTATTTTCCTTCTTCCTCTTGCATGTAGATGCTATTTGAAACCGCCGTTCTGTTCTTAATCCATTGGTTTCGCCTCGCTCGACTTCAATTCCATGGCGAACAATCATTCCGAGACTCCCTCCGATGATTTCCTAGAGCAGATTCTTGGGATTTCCCCTTTCGGTTCGGCGGAGCAAGGGTTAGCTGGAACCGACGGCGGATTGGCAGGAGCTGCTGCTGCGGCGGCTCACGGTCAGGCTCCGATGATGCTTCAACTTAGCTCCGGCGATGGCGGTGGCCACATCTCTACGATTGGAAGTGGAAGTGTCGGTGGTGCAGGGTTCCATGGCGGAACCCCTTTTCCTTTGGGGTTGAGCTTGGACCAAGGGAAGAGTGGGTTTCTTAAGGCTGAGGAAGCTTCTGGAAGTGGCAAGAGGTATTGTGGTGAGGTTGTTGATGTTCGAGCTTCATCTGTGAAAAATGTTTATCAAGGCCAACAAATGCATGCTACTATGGGTGCAGCACCGCATCCACCAACGATGCGCCCTAGGGTACGAGCAAGACGAGGACAGGCGACTGATCCACATAGCATTGCAGAGCGGTTACGAAGAGAAAGAATTGCAGAGAGAATCCGGGCTTTGCAGGAGCTTGTTCCGAGTGTCAATAAGATGGATAGAGCTGCAATGCTCGATGAAATAGTGGACTACGTAAAGTTTCTACGTCTCCAAGTAAAGGTTTTAAGCATGAGTAGATTGGGTGGAGCTGGTGCGGTGGCACCACTTGTAACGGATATTCCACTATCATCAGTTGAGGAAGAAGGAAGTGAGGGTGGTAGGAACCAACCTGCGTGGGAGAAGTGGTCGAACGACGGTACTGAGAGACAAGTTGCGAAGCTTATGGAAGAAAACGTGGGTTCTGCGATGCAATTCCTTCAATCGAAGGCACTCTGCATCATGCCCATCTCATTGGCTTCGGCAATTTATCACACGCAACCGCCCGATAGCTCGAGCGTTGTGAAGCCAGAGAGTAATCCTCCTCCATAGAATCGCCACAATCCTTAAAGGAAAACAGGTAAAAAAAAAAGGGAAGAAAAGAGAAAATTTACGGATCGGTGTTGGGTCCATGGCTGCTTCTTGTCGTCGCAACACTCATGGTTGTTCCCCTTCACTTGTGGTGGGTATTGGTATTGCAATCAAAGTCAGATGCCATAGTTATATTGCTTTTTAAGATTACTTTTGTAGCTTTTGTCAAAACATGGATCAATGTCAATGCCCTAAAAGATGCAAGCAGGCCTTTCAGGTCTTGACAAGCTGAACTAAAGCAAGAAGAATTTGTCAAAGCTTTACTTGATATGCTCTTCTTTTCTTGTTTTTGCATCAATGGGTGGAGGGAGTGGTGGGATATGACCAAAGCACCTTTGTTATGTAGTGGGTTGTGGGACCCTGTAAAAATATGAATAAGAATTCTTCCTTTTTTTTGTGTATTTTAATTGGATGATGTACCTTTACAAGGAAATGCAGAAGTTTGAAATGGAGAGTAGTACTTAGTTTCAAAAAGAGGAAAAAATAAGGTTTAATTATAGAT

Coding sequence (CDS)

ATGGCGAACAATCATTCCGAGACTCCCTCCGATGATTTCCTAGAGCAGATTCTTGGGATTTCCCCTTTCGGTTCGGCGGAGCAAGGGTTAGCTGGAACCGACGGCGGATTGGCAGGAGCTGCTGCTGCGGCGGCTCACGGTCAGGCTCCGATGATGCTTCAACTTAGCTCCGGCGATGGCGGTGGCCACATCTCTACGATTGGAAGTGGAAGTGTCGGTGGTGCAGGGTTCCATGGCGGAACCCCTTTTCCTTTGGGGTTGAGCTTGGACCAAGGGAAGAGTGGGTTTCTTAAGGCTGAGGAAGCTTCTGGAAGTGGCAAGAGGTATTGTGGTGAGGTTGTTGATGTTCGAGCTTCATCTGTGAAAAATGTTTATCAAGGCCAACAAATGCATGCTACTATGGGTGCAGCACCGCATCCACCAACGATGCGCCCTAGGGTACGAGCAAGACGAGGACAGGCGACTGATCCACATAGCATTGCAGAGCGGTTACGAAGAGAAAGAATTGCAGAGAGAATCCGGGCTTTGCAGGAGCTTGTTCCGAGTGTCAATAAGATGGATAGAGCTGCAATGCTCGATGAAATAGTGGACTACGTAAAGTTTCTACGTCTCCAAGTAAAGGTTTTAAGCATGAGTAGATTGGGTGGAGCTGGTGCGGTGGCACCACTTGTAACGGATATTCCACTATCATCAGTTGAGGAAGAAGGAAGTGAGGGTGGTAGGAACCAACCTGCGTGGGAGAAGTGGTCGAACGACGGTACTGAGAGACAAGTTGCGAAGCTTATGGAAGAAAACGTGGGTTCTGCGATGCAATTCCTTCAATCGAAGGCACTCTGCATCATGCCCATCTCATTGGCTTCGGCAATTTATCACACGCAACCGCCCGATAGCTCGAGCGTTGTGAAGCCAGAGAGTAATCCTCCTCCATAG

Protein sequence

MANNHSETPSDDFLEQILGISPFGSAEQGLAGTDGGLAGAAAAAAHGQAPMMLQLSSGDGGGHISTIGSGSVGGAGFHGGTPFPLGLSLDQGKSGFLKAEEASGSGKRYCGEVVDVRASSVKNVYQGQQMHATMGAAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKMDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGGRNQPAWEKWSNDGTERQVAKLMEENVGSAMQFLQSKALCIMPISLASAIYHTQPPDSSSVVKPESNPPP
Homology
[Close]
BLAST of Cp4.1LG12g11360 vs. Swiss-Prot
Match: UNE12_ARATH (Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2 SV=2)

HSP 1 Score: 386.3 bits (991), Expect = 3.1e-106
Identity = 225/311 (72.35%), Postives = 247/311 (79.42%), Query Frame = 1 

Query: 3   NNHSETPSDDFLEQILGISPF-GSAEQGLAGTDGGLAGAAAAAAHGQAPMMLQLSSGDGG 62
           N   +TPSDDF EQILG+  F  S+  GL+G DGGL G       G  PMMLQL SG+ G
Sbjct: 9   NLSDQTPSDDFFEQILGLPNFSASSAAGLSGVDGGLGG-------GAPPMMLQLGSGEEG 68

Query: 63  GHISTIGSGSVGGAGFHGGTPFPLGLSLDQGKS-GFLKAEEASGSGKRYCGEVVDVRASS 122
            H+   G G  G  GFH    FPLGLSLDQGK  GFL+ E   GSGKR+  +VVD R SS
Sbjct: 69  SHMG--GLGGSGPTGFH-NQMFPLGLSLDQGKGPGFLRPEGGHGSGKRFSDDVVDNRCSS 128

Query: 123 VKNVYQGQQMHATMGAAPHPPT-MRPRVRARRGQATDPHSIAERLRRERIAERIRALQEL 182
           +K V+ GQ M     +APH PT +RPRVRARRGQATDPHSIAERLRRERIAERIRALQEL
Sbjct: 129 MKPVFHGQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQEL 188

Query: 183 VPSVNKMDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPL-SSVEEEGSE 242
           VP+VNK DRAAM+DEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTD+PL SSVE+E  E
Sbjct: 189 VPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSVEDETGE 248

Query: 243 GGRN-QPAWEKWSNDGTERQVAKLMEENVGSAMQFLQSKALCIMPISLASAIYHTQPPDS 302
           GGR  QPAWEKWSNDGTERQVAKLMEENVG+AMQ LQSKALC+MPISLA AIYH+QPPD+
Sbjct: 249 GGRTPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDT 308

Query: 303 SSVVKPESNPP 309
           SSVVKPE+NPP
Sbjct: 309 SSVVKPENNPP 309

[Close]
BLAST of Cp4.1LG12g11360 vs. Swiss-Prot
Match: BH007_ARATH (Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 7.8e-94
Identity = 210/321 (65.42%), Postives = 236/321 (73.52%), Query Frame = 1 

Query: 1   MANNHS--------ETPSDDFLEQILGISPF-GSAEQGLAGTDGGLAGAAAAAAHGQAPM 60
           MANN++         +P+DDF EQILG+S F GS+  GL+G  G           G  PM
Sbjct: 1   MANNNNIPHDSISDPSPTDDFFEQILGLSNFSGSSGSGLSGIGG----------VGPPPM 60

Query: 61  MLQLSSGDGGGHISTIGSGSVGGAGFHGGTPFPLGLSLDQGKS-GFLKAEEASGSGKRYC 120
           MLQL SG+ G H      G  G  GFH    FPLGLSLDQGK  GFLK +E   +GKR+ 
Sbjct: 61  MLQLGSGNEGNHNHMGAIGGGGPVGFH-NQMFPLGLSLDQGKGHGFLKPDE---TGKRFQ 120

Query: 121 GEVVDVRASSVKNVYQGQQMHATMGAAPH-PPTMRPRVRARRGQATDPHSIAERLRRERI 180
            +V+D R SS+K ++ GQ M       PH   T+RPRVRARRGQATDPHSIAERLRRERI
Sbjct: 121 DDVLDNRCSSMKPIFHGQPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERI 180

Query: 181 AERIRALQELVPSVNKMDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPL 240
           AERIR+LQELVP+VNK DRAAM+DEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVT++PL
Sbjct: 181 AERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPL 240

Query: 241 SSVEEEGSEGGRNQPAWEKWSNDGTERQVAKLMEENVGSAMQFLQSKALCIMPISLASAI 300
           SS  E+       Q  WEKWSNDGTERQVAKLMEENVG+AMQ LQSKALCIMPISLA AI
Sbjct: 241 SSSVED-----ETQAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAI 300

Query: 301 YHTQPPD-SSSVVKPESNPPP 310
           YH+QPPD SSS+VKPE NPPP
Sbjct: 301 YHSQPPDTSSSIVKPEMNPPP 302

[Close]
BLAST of Cp4.1LG12g11360 vs. Swiss-Prot
Match: BH069_ARATH (Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2 SV=2)

HSP 1 Score: 176.0 bits (445), Expect = 6.3e-43
Identity = 103/176 (58.52%), Postives = 123/176 (69.89%), Query Frame = 1 

Query: 132 ATMGAAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKMDRAAM 191
           AT G A   P  +P+VRARRGQATDPHSIAERLRRERIAER+++LQELVP+ NK D+A+M
Sbjct: 115 ATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASM 174

Query: 192 LDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGGRNQPAWEKWSN 251
           LDEI+DYVKFL+LQVKVLSMSRLGGA + +  +++    S E   S G            
Sbjct: 175 LDEIIDYVKFLQLQVKVLSMSRLGGAASASSQISEDAGGSHENTSSSGEAKM-------- 234

Query: 252 DGTERQVAKLMEENVGSAMQFLQSKALCIMPISLASAIYHTQPPDSSSVVKPESNP 308
             TE QVAKLMEE++GSAMQ+LQ K LC+MPISLA+ I     P  S  VK    P
Sbjct: 235 --TEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATTISTATCPSRSPFVKDTGVP 280

[Close]
BLAST of Cp4.1LG12g11360 vs. Swiss-Prot
Match: BH082_ARATH (Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 9.0e-42
Identity = 102/190 (53.68%), Postives = 129/190 (67.89%), Query Frame = 1 

Query: 126 QGQQMHATMGAAPHPPT-MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVN 185
           +G Q   T+     P    +PRVRARRGQATDPHSIAERLRRERIAER+++LQELVP+ N
Sbjct: 77  EGLQPQGTVSTTSAPVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTN 136

Query: 186 KMDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLS--------SVEEEG 245
           K D+A+MLDEI++YV+FL+LQVKVLSMSRLGGAG+V P +  +           +    G
Sbjct: 137 KTDKASMLDEIIEYVRFLQLQVKVLSMSRLGGAGSVGPRLNGLSAEAGGRLNALTAPCNG 196

Query: 246 SEGGRNQPAWEKWSNDGTERQVAKLMEENVGSAMQFLQSKALCIMPISLASAIYHTQPPD 305
             G  N       S   TE++VAKLMEE++GSAMQ+LQ K LC+MPISLA+AI  +    
Sbjct: 197 LNGNGNATGSSNESLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISSSTTHS 256

Query: 306 SSSVVKPESN 307
             S+  P S+
Sbjct: 257 RGSLFNPISS 266

[Close]
BLAST of Cp4.1LG12g11360 vs. Swiss-Prot
Match: BH066_ARATH (Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.6e-41
Identity = 132/320 (41.25%), Postives = 172/320 (53.75%), Query Frame = 1 

Query: 2   ANNHSETPS-----DDFLEQILGISPFGSAEQGLAGTDGGLAGAAAAAAHGQAPMMLQLS 61
           +++H +TPS     +DFL+QI   +P+ S                   +  Q  MM+ L+
Sbjct: 13  SSSHIQTPSTTFDHEDFLDQIFSSAPWPSVVDDAHPLPSDGFHGHDVDSRNQPIMMMPLN 72

Query: 62  SGDGGGHISTIGSGSVGGAGFHGGTPFPLGLSLDQGKSGFLKAEEASGSGKRYCGEVVDV 121
            G     +         G    G  P      + QG  G L  ++               
Sbjct: 73  DGSSVHAL-------YNGFSVAGSLP---NFQIPQGSGGGLMNQQGQ------------- 132

Query: 122 RASSVKNVYQGQQMHATMGAAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRAL 181
             +  +   Q     AT G    PP  R ++RARRGQATDPHSIAERLRRERIAER++AL
Sbjct: 133 --TQTQTQPQASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKAL 192

Query: 182 QELVPSVNKMDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEG 241
           QELVP+ NK D+A+MLDEI+DYVKFL+LQVKVLSMSRLGGA +V+  +++   S      
Sbjct: 193 QELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASVSSQISEAGGSHGNASS 252

Query: 242 SEGGRNQPAWEKWSNDG---TERQVAKLMEENVGSAMQFLQSKALCIMPISLASAI---- 301
           +  G +Q A    SND    TE QVAKLMEE++GSAMQ+LQ K LC+MPISLA+AI    
Sbjct: 253 AMVGGSQTAGN--SNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTAT 305

Query: 302 YHTQPPDSSSVVKPESNPPP 310
            H++ P     V     P P
Sbjct: 313 CHSRNPLIPGAVADVGGPSP 305

[Close]
BLAST of Cp4.1LG12g11360 vs. TrEMBL
Match: A0A0A0KAD2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G378550 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 1.8e-153
Identity = 293/317 (92.43%), Postives = 301/317 (94.95%), Query Frame = 1 

Query: 1   MANNHSETPSDDFLEQILGISPFGSAEQGLAGTDGGLAGAAAAAA--------HGQAPMM 60
           MANNHS+T +DDFLEQILGI PFGS++QGLAGTDGGLAGAAAAAA         GQAPMM
Sbjct: 1   MANNHSDTQADDFLEQILGI-PFGSSDQGLAGTDGGLAGAAAAAAAAAAAVAAQGQAPMM 60

Query: 61  LQLSSGDGGGHISTIGSGSVGGAGFHGGTPFPLGLSLDQGKSGFLKAEEASGSGKRYCGE 120
           LQLSSGDGGGHI+TIGSGSVGG GFHGG PFPLGLSLDQGKSGFLKAEEASGSGKRYCGE
Sbjct: 61  LQLSSGDGGGHITTIGSGSVGGTGFHGGPPFPLGLSLDQGKSGFLKAEEASGSGKRYCGE 120

Query: 121 VVDVRASSVKNVYQGQQMHATMGAAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAER 180
           VVDVRASSVKNV+QGQQMHA MGAAPHPP MRPRVRARRGQATDPHSIAERLRRERIAER
Sbjct: 121 VVDVRASSVKNVFQGQQMHAAMGAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAER 180

Query: 181 IRALQELVPSVNKMDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSV 240
           IRALQELVPSVNK DRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSV
Sbjct: 181 IRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSV 240

Query: 241 EEEGSEGGRNQPAWEKWSNDGTERQVAKLMEENVGSAMQFLQSKALCIMPISLASAIYHT 300
           EEEGSEGGRNQPAW+KWSNDGTERQVAKLMEENVG+AMQFLQSKALCIMPISLASAIYHT
Sbjct: 241 EEEGSEGGRNQPAWDKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHT 300

Query: 301 QPPDSSSVVKPESNPPP 310
           QPPDSSSVVKPESNPPP
Sbjct: 301 QPPDSSSVVKPESNPPP 316

[Close]
BLAST of Cp4.1LG12g11360 vs. TrEMBL
Match: A0A061DR61_THECC (Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_004217 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 1.3e-127
Identity = 251/308 (81.49%), Postives = 270/308 (87.66%), Query Frame = 1 

Query: 1   MANNHSETPSDDFLEQILGISPFGSAEQGLAGTDGGLAGAAAAAAHGQAPMMLQLSSGDG 60
           MANN +E P+DDFLEQILG+  F   E GL G DGGLAG AAAA    APM+LQLSSGDG
Sbjct: 1   MANNPNEAPADDFLEQILGLPNFAPTEAGLPGPDGGLAGTAAAAG---APMLLQLSSGDG 60

Query: 61  GGHISTIGSGSVGGAGFHGGTPFPLGLSLDQGKSGFLKAEEASGSGKRYCGEVVDVRASS 120
            GH++ IG G  GG  FHG   FPLGLSL+QGK GFLK +EASGSGKR+  +VVD RASS
Sbjct: 61  AGHLAAIGGG--GGGAFHGQV-FPLGLSLEQGKGGFLKPQEASGSGKRFRDDVVDGRASS 120

Query: 121 VKNVYQGQQMHATMGAAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV 180
           VKNV+ GQ M AT+ AAPHPP+MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV
Sbjct: 121 VKNVFHGQPMQATVAAAPHPPSMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV 180

Query: 181 PSVNKMDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGG 240
           PSVNK DRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVE+E  EGG
Sbjct: 181 PSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEDESGEGG 240

Query: 241 RNQPAWEKWSNDGTERQVAKLMEENVGSAMQFLQSKALCIMPISLASAIYHTQPPDSSSV 300
           RNQPAWEKWSNDGTERQVAKLMEENVG+AMQFLQSKALCIMPISLA+AIYHTQPPD+S +
Sbjct: 241 RNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHTQPPDTSPI 300

Query: 301 VKPESNPP 309
           VKPE+NPP
Sbjct: 301 VKPEANPP 302

[Close]
BLAST of Cp4.1LG12g11360 vs. TrEMBL
Match: A0A067JPB1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21845 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 6.4e-127
Identity = 250/308 (81.17%), Postives = 271/308 (87.99%), Query Frame = 1 

Query: 1   MANNHSETPSDDFLEQILGISPFGSAEQGLAGTDGGLAGAAAAAAHGQAPMMLQLSSGDG 60
           MANN +E P+DDFL++ILG+  F SAE GL G DG LAGAA A    QAPMMLQLSSGDG
Sbjct: 1   MANNPTEPPADDFLQEILGLPNFASAEGGLVGADG-LAGAATA----QAPMMLQLSSGDG 60

Query: 61  GGHISTIGSGSVGGAGFHGGTPFPLGLSLDQGKSGFLKAEEASGSGKRYCGEVVDVRASS 120
             HI+T+G+   GGAGFHG   FPLGLSLDQGK GFLK EEASGS KR+  EVVD RA++
Sbjct: 61  SSHIATLGAAGGGGAGFHG---FPLGLSLDQGKGGFLKPEEASGSSKRFRDEVVDGRATA 120

Query: 121 VKNVYQGQQMHATMGAAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV 180
           +KNV+ GQ M  T+ AAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV
Sbjct: 121 MKNVFHGQPMPTTVAAAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV 180

Query: 181 PSVNKMDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGG 240
           PSVNK DRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVE+E  E G
Sbjct: 181 PSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEDETGEDG 240

Query: 241 RNQPAWEKWSNDGTERQVAKLMEENVGSAMQFLQSKALCIMPISLASAIYHTQPPDSSSV 300
           RNQPAWEKWSNDGTERQVAKLMEENVG+AMQFLQSKALCIMPISLA+AIYHTQPPD+S++
Sbjct: 241 RNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHTQPPDTSTI 300

Query: 301 VKPESNPP 309
           VKPE+NPP
Sbjct: 301 VKPETNPP 300

[Close]
BLAST of Cp4.1LG12g11360 vs. TrEMBL
Match: U5GGP3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s23930g PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 1.9e-123
Identity = 247/309 (79.94%), Postives = 266/309 (86.08%), Query Frame = 1 

Query: 1   MANNHSETPSDDFLEQILGISPFGSAEQGLAGTDGGLAGAAAAAAHGQAPMMLQLSSGDG 60
           MANN +E P+DDFL++ILG+  F SAE GL G D GLAGAAAA    QA MMLQLSSGDG
Sbjct: 1   MANNPTEPPTDDFLQEILGMPNFASAEAGLVGADAGLAGAAAA----QASMMLQLSSGDG 60

Query: 61  GGHISTIGSGSVGG-AGFHGGTPFPLGLSLDQGKSGFLKAEEASGSGKRYCGEVVDVRAS 120
            GHIS +G    GG AGFHG   FPLGLSL+QGK GFLK EEASGSGKR+  E+VD RA 
Sbjct: 61  SGHISDLGGAPGGGSAGFHG---FPLGLSLEQGKGGFLKPEEASGSGKRFRDEIVDGRA- 120

Query: 121 SVKNVYQGQQMHATMGAAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQEL 180
             KNV+ GQ M  T+  APHPP MRPRVRARRGQATDPHSIAERLRRERIAERIRALQEL
Sbjct: 121 --KNVFHGQPMPTTVAIAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQEL 180

Query: 181 VPSVNKMDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEG 240
           VPSVNK DRA MLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVE+E  EG
Sbjct: 181 VPSVNKTDRATMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEDETGEG 240

Query: 241 GRNQPAWEKWSNDGTERQVAKLMEENVGSAMQFLQSKALCIMPISLASAIYHTQPPDSSS 300
           GRNQPAWEKWSNDGTERQVAKLMEENVG+AMQFLQSKALCIMPISLA+AIYHTQPPD+++
Sbjct: 241 GRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHTQPPDTTT 299

Query: 301 VVKPESNPP 309
           +VKPE+NPP
Sbjct: 301 IVKPETNPP 299

[Close]
BLAST of Cp4.1LG12g11360 vs. TrEMBL
Match: A0A0U2QN23_9ROSA (BHLH transcription factor OS=Prunus pseudocerasus PE=2 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 2.5e-123
Identity = 243/308 (78.90%), Postives = 265/308 (86.04%), Query Frame = 1 

Query: 1   MANNHSETPSDDFLEQILGISPFGSAEQGLAGTDGGLAGAAAAAAHGQAPMMLQLSSGDG 60
           MANN SE P+DDFLEQILG+  F SA+  LAG DGGL  A  + +    PMMLQL+SGDG
Sbjct: 1   MANNPSEAPADDFLEQILGLPNFASADANLAGNDGGLTAAQVSPS----PMMLQLNSGDG 60

Query: 61  GGHISTIGSGSVGGAGFHGGTPFPLGLSLDQGKSGFLKAEEASGSGKRYCGEVVDVRASS 120
            GHI+ +G G     G + G  FPLGLSL+QGK+GFLK EEASGSGKR+  ++VD R SS
Sbjct: 61  SGHIAAVGVG-----GGYRGPVFPLGLSLEQGKAGFLKPEEASGSGKRFRDDMVDSRGSS 120

Query: 121 VKNVYQGQQMHATMGAAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV 180
           VKNV+ GQ +  ++ AAPHPP MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV
Sbjct: 121 VKNVFHGQPISNSVAAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV 180

Query: 181 PSVNKMDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGG 240
           PSVNK DRAAMLDEI+DYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEG EGG
Sbjct: 181 PSVNKTDRAAMLDEIMDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGGEGG 240

Query: 241 RNQPAWEKWSNDGTERQVAKLMEENVGSAMQFLQSKALCIMPISLASAIYHTQPPDSSSV 300
           RNQPAW+KWSNDGTERQVAKLMEENVG+AMQFLQSKALCIMPISLASAIYHTQPPD+SSV
Sbjct: 241 RNQPAWDKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHTQPPDTSSV 299

Query: 301 VKPESNPP 309
           VKPE NPP
Sbjct: 301 VKPEMNPP 299

[Close]
BLAST of Cp4.1LG12g11360 vs. TAIR10
Match: AT4G02590.1 (AT4G02590.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 386.3 bits (991), Expect = 1.7e-107
Identity = 225/311 (72.35%), Postives = 247/311 (79.42%), Query Frame = 1 

Query: 3   NNHSETPSDDFLEQILGISPF-GSAEQGLAGTDGGLAGAAAAAAHGQAPMMLQLSSGDGG 62
           N   +TPSDDF EQILG+  F  S+  GL+G DGGL G       G  PMMLQL SG+ G
Sbjct: 9   NLSDQTPSDDFFEQILGLPNFSASSAAGLSGVDGGLGG-------GAPPMMLQLGSGEEG 68

Query: 63  GHISTIGSGSVGGAGFHGGTPFPLGLSLDQGKS-GFLKAEEASGSGKRYCGEVVDVRASS 122
            H+   G G  G  GFH    FPLGLSLDQGK  GFL+ E   GSGKR+  +VVD R SS
Sbjct: 69  SHMG--GLGGSGPTGFH-NQMFPLGLSLDQGKGPGFLRPEGGHGSGKRFSDDVVDNRCSS 128

Query: 123 VKNVYQGQQMHATMGAAPHPPT-MRPRVRARRGQATDPHSIAERLRRERIAERIRALQEL 182
           +K V+ GQ M     +APH PT +RPRVRARRGQATDPHSIAERLRRERIAERIRALQEL
Sbjct: 129 MKPVFHGQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQEL 188

Query: 183 VPSVNKMDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPL-SSVEEEGSE 242
           VP+VNK DRAAM+DEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTD+PL SSVE+E  E
Sbjct: 189 VPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSVEDETGE 248

Query: 243 GGRN-QPAWEKWSNDGTERQVAKLMEENVGSAMQFLQSKALCIMPISLASAIYHTQPPDS 302
           GGR  QPAWEKWSNDGTERQVAKLMEENVG+AMQ LQSKALC+MPISLA AIYH+QPPD+
Sbjct: 249 GGRTPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDT 308

Query: 303 SSVVKPESNPP 309
           SSVVKPE+NPP
Sbjct: 309 SSVVKPENNPP 309

[Close]
BLAST of Cp4.1LG12g11360 vs. TAIR10
Match: AT1G03040.1 (AT1G03040.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 345.1 bits (884), Expect = 4.4e-95
Identity = 210/321 (65.42%), Postives = 236/321 (73.52%), Query Frame = 1 

Query: 1   MANNHS--------ETPSDDFLEQILGISPF-GSAEQGLAGTDGGLAGAAAAAAHGQAPM 60
           MANN++         +P+DDF EQILG+S F GS+  GL+G  G           G  PM
Sbjct: 1   MANNNNIPHDSISDPSPTDDFFEQILGLSNFSGSSGSGLSGIGG----------VGPPPM 60

Query: 61  MLQLSSGDGGGHISTIGSGSVGGAGFHGGTPFPLGLSLDQGKS-GFLKAEEASGSGKRYC 120
           MLQL SG+ G H      G  G  GFH    FPLGLSLDQGK  GFLK +E   +GKR+ 
Sbjct: 61  MLQLGSGNEGNHNHMGAIGGGGPVGFH-NQMFPLGLSLDQGKGHGFLKPDE---TGKRFQ 120

Query: 121 GEVVDVRASSVKNVYQGQQMHATMGAAPH-PPTMRPRVRARRGQATDPHSIAERLRRERI 180
            +V+D R SS+K ++ GQ M       PH   T+RPRVRARRGQATDPHSIAERLRRERI
Sbjct: 121 DDVLDNRCSSMKPIFHGQPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERI 180

Query: 181 AERIRALQELVPSVNKMDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPL 240
           AERIR+LQELVP+VNK DRAAM+DEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVT++PL
Sbjct: 181 AERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPL 240

Query: 241 SSVEEEGSEGGRNQPAWEKWSNDGTERQVAKLMEENVGSAMQFLQSKALCIMPISLASAI 300
           SS  E+       Q  WEKWSNDGTERQVAKLMEENVG+AMQ LQSKALCIMPISLA AI
Sbjct: 241 SSSVED-----ETQAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAI 300

Query: 301 YHTQPPD-SSSVVKPESNPPP 310
           YH+QPPD SSS+VKPE NPPP
Sbjct: 301 YHSQPPDTSSSIVKPEMNPPP 302

[Close]
BLAST of Cp4.1LG12g11360 vs. TAIR10
Match: AT4G30980.1 (AT4G30980.1 LJRHL1-like 2)

HSP 1 Score: 176.0 bits (445), Expect = 3.5e-44
Identity = 103/176 (58.52%), Postives = 123/176 (69.89%), Query Frame = 1 

Query: 132 ATMGAAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKMDRAAM 191
           AT G A   P  +P+VRARRGQATDPHSIAERLRRERIAER+++LQELVP+ NK D+A+M
Sbjct: 115 ATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASM 174

Query: 192 LDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGGRNQPAWEKWSN 251
           LDEI+DYVKFL+LQVKVLSMSRLGGA + +  +++    S E   S G            
Sbjct: 175 LDEIIDYVKFLQLQVKVLSMSRLGGAASASSQISEDAGGSHENTSSSGEAKM-------- 234

Query: 252 DGTERQVAKLMEENVGSAMQFLQSKALCIMPISLASAIYHTQPPDSSSVVKPESNP 308
             TE QVAKLMEE++GSAMQ+LQ K LC+MPISLA+ I     P  S  VK    P
Sbjct: 235 --TEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATTISTATCPSRSPFVKDTGVP 280

[Close]
BLAST of Cp4.1LG12g11360 vs. TAIR10
Match: AT5G58010.1 (AT5G58010.1 LJRHL1-like 3)

HSP 1 Score: 172.2 bits (435), Expect = 5.1e-43
Identity = 102/190 (53.68%), Postives = 129/190 (67.89%), Query Frame = 1 

Query: 126 QGQQMHATMGAAPHPPT-MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVN 185
           +G Q   T+     P    +PRVRARRGQATDPHSIAERLRRERIAER+++LQELVP+ N
Sbjct: 77  EGLQPQGTVSTTSAPVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTN 136

Query: 186 KMDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLS--------SVEEEG 245
           K D+A+MLDEI++YV+FL+LQVKVLSMSRLGGAG+V P +  +           +    G
Sbjct: 137 KTDKASMLDEIIEYVRFLQLQVKVLSMSRLGGAGSVGPRLNGLSAEAGGRLNALTAPCNG 196

Query: 246 SEGGRNQPAWEKWSNDGTERQVAKLMEENVGSAMQFLQSKALCIMPISLASAIYHTQPPD 305
             G  N       S   TE++VAKLMEE++GSAMQ+LQ K LC+MPISLA+AI  +    
Sbjct: 197 LNGNGNATGSSNESLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISSSTTHS 256

Query: 306 SSSVVKPESN 307
             S+  P S+
Sbjct: 257 RGSLFNPISS 266

[Close]
BLAST of Cp4.1LG12g11360 vs. TAIR10
Match: AT2G24260.1 (AT2G24260.1 LJRHL1-like 1)

HSP 1 Score: 170.6 bits (431), Expect = 1.5e-42
Identity = 132/320 (41.25%), Postives = 172/320 (53.75%), Query Frame = 1 

Query: 2   ANNHSETPS-----DDFLEQILGISPFGSAEQGLAGTDGGLAGAAAAAAHGQAPMMLQLS 61
           +++H +TPS     +DFL+QI   +P+ S                   +  Q  MM+ L+
Sbjct: 13  SSSHIQTPSTTFDHEDFLDQIFSSAPWPSVVDDAHPLPSDGFHGHDVDSRNQPIMMMPLN 72

Query: 62  SGDGGGHISTIGSGSVGGAGFHGGTPFPLGLSLDQGKSGFLKAEEASGSGKRYCGEVVDV 121
            G     +         G    G  P      + QG  G L  ++               
Sbjct: 73  DGSSVHAL-------YNGFSVAGSLP---NFQIPQGSGGGLMNQQGQ------------- 132

Query: 122 RASSVKNVYQGQQMHATMGAAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRAL 181
             +  +   Q     AT G    PP  R ++RARRGQATDPHSIAERLRRERIAER++AL
Sbjct: 133 --TQTQTQPQASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKAL 192

Query: 182 QELVPSVNKMDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEG 241
           QELVP+ NK D+A+MLDEI+DYVKFL+LQVKVLSMSRLGGA +V+  +++   S      
Sbjct: 193 QELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASVSSQISEAGGSHGNASS 252

Query: 242 SEGGRNQPAWEKWSNDG---TERQVAKLMEENVGSAMQFLQSKALCIMPISLASAI---- 301
           +  G +Q A    SND    TE QVAKLMEE++GSAMQ+LQ K LC+MPISLA+AI    
Sbjct: 253 AMVGGSQTAGN--SNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTAT 305

Query: 302 YHTQPPDSSSVVKPESNPPP 310
            H++ P     V     P P
Sbjct: 313 CHSRNPLIPGAVADVGGPSP 305

[Close]
BLAST of Cp4.1LG12g11360 vs. NCBI nr
Match: gi|659100790|ref|XP_008451266.1| (PREDICTED: transcription factor UNE12 [Cucumis melo])

HSP 1 Score: 550.8 bits (1418), Expect = 1.5e-153
Identity = 292/313 (93.29%), Postives = 301/313 (96.17%), Query Frame = 1 

Query: 1   MANNHSETPSDDFLEQILGISPFGSAEQGLAGTDGGLAGAAAAAA-----HGQAPMMLQL 60
           MANNHS+T +DDFLEQILGI PFGS++QGLAGTDGGLAGAAAAAA      GQAPMMLQL
Sbjct: 1   MANNHSDTQADDFLEQILGI-PFGSSDQGLAGTDGGLAGAAAAAAAAAAAQGQAPMMLQL 60

Query: 61  SSGDGGGHISTIGSGSVGGAGFHGGTPFPLGLSLDQGKSGFLKAEEASGSGKRYCGEVVD 120
           SSGDGGGHI+TIGSGSVGG GFHGG PFPLGLSLDQGKSGFLKAEEASGSGKRYCGEVVD
Sbjct: 61  SSGDGGGHITTIGSGSVGGTGFHGGPPFPLGLSLDQGKSGFLKAEEASGSGKRYCGEVVD 120

Query: 121 VRASSVKNVYQGQQMHATMGAAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRA 180
           VRASSVKNV+QGQQMHATMGAAPHPP MRPRVRARRGQATDPHSIAERLRRERIAERIRA
Sbjct: 121 VRASSVKNVFQGQQMHATMGAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRA 180

Query: 181 LQELVPSVNKMDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEE 240
           LQELVPSVNK DRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEE
Sbjct: 181 LQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEE 240

Query: 241 GSEGGRNQPAWEKWSNDGTERQVAKLMEENVGSAMQFLQSKALCIMPISLASAIYHTQPP 300
           GSEGGRNQPAW+KWSNDGTERQVAKLMEENVG+AMQFLQSKALCIMPISLASAIYHTQPP
Sbjct: 241 GSEGGRNQPAWDKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHTQPP 300

Query: 301 DSSSVVKPESNPP 309
           DSSS+VKPESNPP
Sbjct: 301 DSSSIVKPESNPP 312

[Close]
BLAST of Cp4.1LG12g11360 vs. NCBI nr
Match: gi|449458442|ref|XP_004146956.1| (PREDICTED: transcription factor UNE12 [Cucumis sativus])

HSP 1 Score: 550.1 bits (1416), Expect = 2.5e-153
Identity = 293/317 (92.43%), Postives = 301/317 (94.95%), Query Frame = 1 

Query: 1   MANNHSETPSDDFLEQILGISPFGSAEQGLAGTDGGLAGAAAAAA--------HGQAPMM 60
           MANNHS+T +DDFLEQILGI PFGS++QGLAGTDGGLAGAAAAAA         GQAPMM
Sbjct: 1   MANNHSDTQADDFLEQILGI-PFGSSDQGLAGTDGGLAGAAAAAAAAAAAVAAQGQAPMM 60

Query: 61  LQLSSGDGGGHISTIGSGSVGGAGFHGGTPFPLGLSLDQGKSGFLKAEEASGSGKRYCGE 120
           LQLSSGDGGGHI+TIGSGSVGG GFHGG PFPLGLSLDQGKSGFLKAEEASGSGKRYCGE
Sbjct: 61  LQLSSGDGGGHITTIGSGSVGGTGFHGGPPFPLGLSLDQGKSGFLKAEEASGSGKRYCGE 120

Query: 121 VVDVRASSVKNVYQGQQMHATMGAAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAER 180
           VVDVRASSVKNV+QGQQMHA MGAAPHPP MRPRVRARRGQATDPHSIAERLRRERIAER
Sbjct: 121 VVDVRASSVKNVFQGQQMHAAMGAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAER 180

Query: 181 IRALQELVPSVNKMDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSV 240
           IRALQELVPSVNK DRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSV
Sbjct: 181 IRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSV 240

Query: 241 EEEGSEGGRNQPAWEKWSNDGTERQVAKLMEENVGSAMQFLQSKALCIMPISLASAIYHT 300
           EEEGSEGGRNQPAW+KWSNDGTERQVAKLMEENVG+AMQFLQSKALCIMPISLASAIYHT
Sbjct: 241 EEEGSEGGRNQPAWDKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHT 300

Query: 301 QPPDSSSVVKPESNPPP 310
           QPPDSSSVVKPESNPPP
Sbjct: 301 QPPDSSSVVKPESNPPP 316

[Close]
BLAST of Cp4.1LG12g11360 vs. NCBI nr
Match: gi|590716539|ref|XP_007050429.1| (Basic helix-loop-helix DNA-binding superfamily protein [Theobroma cacao])

HSP 1 Score: 464.2 bits (1193), Expect = 1.8e-127
Identity = 251/308 (81.49%), Postives = 270/308 (87.66%), Query Frame = 1 

Query: 1   MANNHSETPSDDFLEQILGISPFGSAEQGLAGTDGGLAGAAAAAAHGQAPMMLQLSSGDG 60
           MANN +E P+DDFLEQILG+  F   E GL G DGGLAG AAAA    APM+LQLSSGDG
Sbjct: 1   MANNPNEAPADDFLEQILGLPNFAPTEAGLPGPDGGLAGTAAAAG---APMLLQLSSGDG 60

Query: 61  GGHISTIGSGSVGGAGFHGGTPFPLGLSLDQGKSGFLKAEEASGSGKRYCGEVVDVRASS 120
            GH++ IG G  GG  FHG   FPLGLSL+QGK GFLK +EASGSGKR+  +VVD RASS
Sbjct: 61  AGHLAAIGGG--GGGAFHGQV-FPLGLSLEQGKGGFLKPQEASGSGKRFRDDVVDGRASS 120

Query: 121 VKNVYQGQQMHATMGAAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV 180
           VKNV+ GQ M AT+ AAPHPP+MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV
Sbjct: 121 VKNVFHGQPMQATVAAAPHPPSMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV 180

Query: 181 PSVNKMDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGG 240
           PSVNK DRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVE+E  EGG
Sbjct: 181 PSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEDESGEGG 240

Query: 241 RNQPAWEKWSNDGTERQVAKLMEENVGSAMQFLQSKALCIMPISLASAIYHTQPPDSSSV 300
           RNQPAWEKWSNDGTERQVAKLMEENVG+AMQFLQSKALCIMPISLA+AIYHTQPPD+S +
Sbjct: 241 RNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHTQPPDTSPI 300

Query: 301 VKPESNPP 309
           VKPE+NPP
Sbjct: 301 VKPEANPP 302

[Close]
BLAST of Cp4.1LG12g11360 vs. NCBI nr
Match: gi|802788247|ref|XP_012092122.1| (PREDICTED: transcription factor UNE12-like [Jatropha curcas])

HSP 1 Score: 461.8 bits (1187), Expect = 9.1e-127
Identity = 250/308 (81.17%), Postives = 271/308 (87.99%), Query Frame = 1 

Query: 1   MANNHSETPSDDFLEQILGISPFGSAEQGLAGTDGGLAGAAAAAAHGQAPMMLQLSSGDG 60
           MANN +E P+DDFL++ILG+  F SAE GL G DG LAGAA A    QAPMMLQLSSGDG
Sbjct: 1   MANNPTEPPADDFLQEILGLPNFASAEGGLVGADG-LAGAATA----QAPMMLQLSSGDG 60

Query: 61  GGHISTIGSGSVGGAGFHGGTPFPLGLSLDQGKSGFLKAEEASGSGKRYCGEVVDVRASS 120
             HI+T+G+   GGAGFHG   FPLGLSLDQGK GFLK EEASGS KR+  EVVD RA++
Sbjct: 61  SSHIATLGAAGGGGAGFHG---FPLGLSLDQGKGGFLKPEEASGSSKRFRDEVVDGRATA 120

Query: 121 VKNVYQGQQMHATMGAAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV 180
           +KNV+ GQ M  T+ AAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV
Sbjct: 121 MKNVFHGQPMPTTVAAAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV 180

Query: 181 PSVNKMDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGG 240
           PSVNK DRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVE+E  E G
Sbjct: 181 PSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEDETGEDG 240

Query: 241 RNQPAWEKWSNDGTERQVAKLMEENVGSAMQFLQSKALCIMPISLASAIYHTQPPDSSSV 300
           RNQPAWEKWSNDGTERQVAKLMEENVG+AMQFLQSKALCIMPISLA+AIYHTQPPD+S++
Sbjct: 241 RNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHTQPPDTSTI 300

Query: 301 VKPESNPP 309
           VKPE+NPP
Sbjct: 301 VKPETNPP 300

[Close]
BLAST of Cp4.1LG12g11360 vs. NCBI nr
Match: gi|1009147547|ref|XP_015891470.1| (PREDICTED: transcription factor UNE12 [Ziziphus jujuba])

HSP 1 Score: 456.1 bits (1172), Expect = 5.0e-125
Identity = 248/308 (80.52%), Postives = 269/308 (87.34%), Query Frame = 1 

Query: 1   MANNHSETPSDDFLEQILGISPFGSAEQGLAGTDGGLAGAAAAAAHGQAPMMLQLSSGDG 60
           MANN SE PSDDFLEQILG+  F SA+  LAG+DG LAGA AA      PMMLQL+SGD 
Sbjct: 22  MANNPSEAPSDDFLEQILGLPNFASADTNLAGSDGDLAGAPAA------PMMLQLNSGDT 81

Query: 61  GGHISTIGSGSVGGAGFHGGTPFPLGLSLDQGKSGFLKAEEASGSGKRYCGEVVDVRASS 120
            GH++T+G G   GAGFH    FPLGLSL+QGK+GFLK E+ASGSGKR+  +VVD RASS
Sbjct: 82  AGHMATVGGG---GAGFHASV-FPLGLSLEQGKAGFLKPEDASGSGKRFRDDVVDGRASS 141

Query: 121 VKNVYQGQQMHATMGAAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV 180
           VKNV+ GQ +  ++  APHPP MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV
Sbjct: 142 VKNVFHGQPIPTSVATAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV 201

Query: 181 PSVNKMDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGG 240
           PSVNK DRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEG+E G
Sbjct: 202 PSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGNESG 261

Query: 241 RNQPAWEKWSNDGTERQVAKLMEENVGSAMQFLQSKALCIMPISLASAIYHTQPPDSSSV 300
           RNQPAWEKWSNDGTERQVAKLMEENVG+AMQ LQSKALCIMPISLASAIYHTQPPD++SV
Sbjct: 262 RNQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPISLASAIYHTQPPDTASV 319

Query: 301 VKPESNPP 309
           VKPE+NPP
Sbjct: 322 VKPETNPP 319

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g11360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UNE12_ARATH3.1e-10672.35Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2 SV=2[more]
BH007_ARATH7.8e-9465.42Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2 SV=1[more]
BH069_ARATH6.3e-4358.52Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2 SV=2[more]
BH082_ARATH9.0e-4253.68Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2 SV=1[more]
BH066_ARATH2.6e-4141.25Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2 SV=1[more]
BLAST of Cp4.1LG12g11360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAD2_CUCSA1.8e-15392.43Uncharacterized protein OS=Cucumis sativus GN=Csa_7G378550 PE=4 SV=1[more]
A0A061DR61_THECC1.3e-12781.49Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao GN=TCM... [more]
A0A067JPB1_JATCU6.4e-12781.17Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21845 PE=4 SV=1[more]
U5GGP3_POPTR1.9e-12379.94Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s23930g PE=4 SV=1[more]
A0A0U2QN23_9ROSA2.5e-12378.90BHLH transcription factor OS=Prunus pseudocerasus PE=2 SV=1[more]
BLAST of Cp4.1LG12g11360 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G02590.11.7e-10772.35 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G03040.14.4e-9565.42 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G30980.13.5e-4458.52 LJRHL1-like 2[more]
AT5G58010.15.1e-4353.68 LJRHL1-like 3[more]
AT2G24260.11.5e-4241.25 LJRHL1-like 1[more]
BLAST of Cp4.1LG12g11360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659100790|ref|XP_008451266.1|1.5e-15393.29PREDICTED: transcription factor UNE12 [Cucumis melo][more]
gi|449458442|ref|XP_004146956.1|2.5e-15392.43PREDICTED: transcription factor UNE12 [Cucumis sativus][more]
gi|590716539|ref|XP_007050429.1|1.8e-12781.49Basic helix-loop-helix DNA-binding superfamily protein [Theobroma cacao][more]
gi|802788247|ref|XP_012092122.1|9.1e-12781.17PREDICTED: transcription factor UNE12-like [Jatropha curcas][more]
gi|1009147547|ref|XP_015891470.1|5.0e-12580.52PREDICTED: transcription factor UNE12 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g11360.1Cp4.1LG12g11360.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 155..212
score: 3.0
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 158..202
score: 2.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 159..208
score: 5.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 153..202
score: 16
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 151..212
score: 1.7
NoneNo IPR availablePANTHERPTHR16223FAMILY NOT NAMEDcoord: 243..309
score: 5.1E-151coord: 9..223
score: 5.1E
NoneNo IPR availablePANTHERPTHR16223:SF15TRANSCRIPTION FACTOR UNE12-RELATEDcoord: 243..309
score: 5.1E-151coord: 9..223
score: 5.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g11360Cucsa.388780Cucumber (Gy14) v1cgycpeB1028
Cp4.1LG12g11360CmaCh17G012130Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g11360CmaCh08G003030Cucurbita maxima (Rimu)cmacpeB900
Cp4.1LG12g11360CmoCh17G011900Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g11360Cla014806Watermelon (97103) v1cpewmB131
Cp4.1LG12g11360Csa7G378550Cucumber (Chinese Long) v2cpecuB161
Cp4.1LG12g11360MELO3C015760Melon (DHL92) v3.5.1cpemeB122
Cp4.1LG12g11360ClCG09G007500Watermelon (Charleston Gray)cpewcgB126
Cp4.1LG12g11360CSPI07G15880Wild cucumber (PI 183967)cpecpiB163
Cp4.1LG12g11360Lsi02G022450Bottle gourd (USVL1VR-Ls)cpelsiB113
Cp4.1LG12g11360MELO3C015760.2Melon (DHL92) v3.6.1cpemedB147
Cp4.1LG12g11360CsaV3_7G027630Cucumber (Chinese Long) v3cpecucB0189
Cp4.1LG12g11360Bhi09G000919Wax gourdcpewgoB0203
Cp4.1LG12g11360CsGy7G014410Cucumber (Gy14) v2cgybcpeB906
Cp4.1LG12g11360Carg07284Silver-seed gourdcarcpeB0158
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g11360Wax gourdcpewgoB0197
Cp4.1LG12g11360Cucurbita pepo (Zucchini)cpecpeB157
Cp4.1LG12g11360Cucurbita pepo (Zucchini)cpecpeB176
Cp4.1LG12g11360Cucurbita maxima (Rimu)cmacpeB902
Cp4.1LG12g11360Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g11360Wild cucumber (PI 183967)cpecpiB162
Cp4.1LG12g11360Cucumber (Chinese Long) v2cpecuB160
Cp4.1LG12g11360Melon (DHL92) v3.5.1cpemeB119
Cp4.1LG12g11360Melon (DHL92) v3.5.1cpemeB124
Cp4.1LG12g11360Melon (DHL92) v3.6.1cpemedB151
Cp4.1LG12g11360Silver-seed gourdcarcpeB1371
Cp4.1LG12g11360Cucumber (Chinese Long) v3cpecucB0185