Cp4.1LG12g11350 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g11350
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionWRKY transcription factor, putative
LocationCp4.1LG12 : 8808822 .. 8811124 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCGAACGTTTTGGCTGCCGACTTAAGATGTTGAATATCTCGTAACTTTGTTAGACTCCTATAACTATAAGCTCGAGTGGAGGAACATTAATGTCATGTTCAATGTCTACAACTTGCTGTATGGTACAAATAAGGATGAATAATACATCGGTCGTGCTCTTTTGCTTTAGTTCTAGAAGTCTAGAAATCGATCCATTCAGATAGAAACTCAGAGTTAAGAGCACCTGGTTTAAAAAGAAAAGCTTCATCAATCAACAATCACACAAGGAAAAGATTCAGGGTGAAGACAGAAAACAGAATGACCCAGCAACTTCTTCCCTTACGGTATAATAAGGGTTGTTGAGGATTATTGGAAGTGAGTCACGGTTAATTTAGTGGAAGATCATGGGTTTATAATCCATTGGTATGAGGCCTTTTGAGGAAGCCCAAAGTAAAGCCACGAGAGCTTATACTCAAAGTGGAAAATATCATACCATTATGGAGAGTCGTGATTCCTAACAAGGGTCACGAGAGCTCTATTTCCATTATCCTTTGACGTACTGACATATAATGAAAGATTTTTTGAACATATTGCCTAATGGGTAAATTCTGTGGCCATGATTTGAGCCTTTCATTCAGATTATCTGCAAATATTCAGTTCAGCACGTGTACTGCTTCACTAGAACATGGCCTCTTTTGTTTTCTACTCTCTGTTCCTTGATATGAAAGAGTGGAGAATATTTCCTCTGTTCTTAATGATCTACAATTTAGGTTCAAATTTAGATTTCATGAACTTCTATAAGATCTGTTTGTCTCTGAATTTTTTTTAATAATCATTTTGATTTTTACGATAGGTAAATAACGTCGAAGCCCGAAGGTATATTAACGGGTTGATGTGACCAAGAGCTCGCATTGAAGCTATATAGAAGGTTGAAGGTAGCAGGTAATATGAGGTACGTAAGGTATATTAAATTGTTTTAAAATTTTCTATGATTTGTGCCTCATGTTCTCCGAGTAGAGTAGTCCATTGAATTCTTCACCGACATGGGGGAGGCCATTTTGTGTCGTTTATAAATCGAGCAGGAATCATTTGTTAGGAATCACGACCCTCCACAGTGGTATGATATCCTCCACAATGGTATGATATTCTCCACTTTGAGCATAACCTCTCATGACTTTGTTTTTTGCTTCCCCAAAAAGGCTTCATACCAATGGAGATGAGGATCAACCCCCTAATTAGCTGATGTGTGAGACTCCTCTTCCAACAATCCTCTCCTCGAACAAAGTACACCATAGAGCCTCCCCTGAGGCCTATGGAGCCCTCAACAACCTCCCCTTAATTGAGGCTCGACTCCTTCTTTGGAGCCCTCAAACAAAGTACACCATTTGTTCAACACTTGAGTCACTTTTTACTACCCTTCGAGACTTCCAATCTTTTTGTTCAACATTTGAGGATTCTATTGACAGGGGGCTAAGTTAAGGACATGACTTTAATACCATGTTAGGAATCACGTCTCTCCACAATGGTATGATATTGTCTACTTTGAGCATAAACTCTCATGGCTTTACTTTTGGTTTCCCCAAAAGGCCTCATACCAATGGAGATGTATTCCTTATTAAACCCATGATCAACCATTTAACTAGCTAGCTGATGTGGGACTACTCTTCCAACAATCCTCAACATCTTTCTTGTTCATCTGTCAAAGTTGCATTATGTACTGTATGCAACTTTGTTCCTCGATGTCGATCTTAATTTACTCTCAAACATCTGCAGAGGATACTATAAGTGCAGCAGCATGAGAGGTTGTCCAGCAAGGAAGCATGTCGAGCGGTGTCTCGAGGAACCTTCAATGCTCATTGTTACATATGAAGGTGAACACAACCATCCCAGAATAGCTTCTCAATTCCCAAATACTTGAACCCCATCAAGACTACTACTCGAAAAAAGATTCGAAAACCTCCACGAAACGTAGCGAAACTCGAGAGTTTCTGTACATATGGAAGAAGAATACTTATGGAGCTCTGCATTTTAGCTCTTTCGAGAGGTGGGTTTGCTTGCAAAAGCCTGTTTTAATCACATCTGGCAATTCTGAAGCTCAGAATTTTGTAGATTAGGGTGTGAATGTAAAATCTTGAAGAACTCTCATCCTTCTCTGCAATTACTGCTTCGAACAACTTTATTATTCTAAATTAATGGAGAAGTCCTCAAGAGCATTTTTCGTTACGTCCTTGAACCAATAATCATCTTTCGGCTAAACAACATGATCAACTTTACAAATGTTTTATAGTTAAGTCGGTTCGTTTATATTTAGAAAATTT

mRNA sequence

ATGGATAGAAACTCAGAGTTAAGAGCACCTGGTTTAAAAAGAAAAGCTTCATCAATCAACAATCACACAAGGAAAAGATTCAGGGTAAATAACGTCGAAGCCCGAAGAGGATACTATAAGTGCAGCAGCATGAGAGGTTGTCCAGCAAGGAAGCATGTCGAGCGGTGTCTCGAGGAACCTTCAATGCTCATTGTTACATATGAAGGTGAACACAACCATCCCAGAATAGCTTCTCAATTCCCAAATACTTGAACCCCATCAAGACTACTACTCGAAAAAAGATTCGAAAACCTCCACGAAACGTAGCGAAACTCGAGAGTTTCTGTACATATGGAAGAAGAATACTTATGGAGCTCTGCATTTTAGCTCTTTCGAGAGGTGGGTTTGCTTGCAAAAGCCTGTTTTAATCACATCTGGCAATTCTGAAGCTCAGAATTTTGTAGATTAGGGTGTGAATGTAAAATCTTGAAGAACTCTCATCCTTCTCTGCAATTACTGCTTCGAACAACTTTATTATTCTAAATTAATGGAGAAGTCCTCAAGAGCATTTTTCGTTACGTCCTTGAACCAATAATCATCTTTCGGCTAAACAACATGATCAACTTTACAAATGTTTTATAGTTAAGTCGGTTCGTTTATATTTAGAAAATTT

Coding sequence (CDS)

ATGGATAGAAACTCAGAGTTAAGAGCACCTGGTTTAAAAAGAAAAGCTTCATCAATCAACAATCACACAAGGAAAAGATTCAGGGTAAATAACGTCGAAGCCCGAAGAGGATACTATAAGTGCAGCAGCATGAGAGGTTGTCCAGCAAGGAAGCATGTCGAGCGGTGTCTCGAGGAACCTTCAATGCTCATTGTTACATATGAAGGTGAACACAACCATCCCAGAATAGCTTCTCAATTCCCAAATACTTGA

Protein sequence

MDRNSELRAPGLKRKASSINNHTRKRFRVNNVEARRGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIASQFPNT
Homology
[Close]
BLAST of Cp4.1LG12g11350 vs. Swiss-Prot
Match: WRK21_ARATH (Probable WRKY transcription factor 21 OS=Arabidopsis thaliana GN=WRKY21 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 9.3e-18
Identity = 42/78 (53.85%), Postives = 58/78 (74.36%), Query Frame = 1 

Query: 7   LRAPGLKRKASSI--NNHTRKRFRVNNVEAR---RGYYKCSSMRGCPARKHVERCLEEPS 66
           +R P +  K + I  ++++ +++    ++     RGYYKCSSMRGCPARKHVERCLE+P+
Sbjct: 299 IRVPAISNKVADIPPDDYSWRKYGQKPIKGSPYPRGYYKCSSMRGCPARKHVERCLEDPA 358

Query: 67  MLIVTYEGEHNHPRIASQ 80
           MLIVTYE EHNHP++ SQ
Sbjct: 359 MLIVTYEAEHNHPKLPSQ 376

[Close]
BLAST of Cp4.1LG12g11350 vs. Swiss-Prot
Match: WRK74_ARATH (Probable WRKY transcription factor 74 OS=Arabidopsis thaliana GN=WRKY74 PE=2 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 1.3e-16
Identity = 38/43 (88.37%), Postives = 40/43 (93.02%), Query Frame = 1 

Query: 36  RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIAS 79
           RGYYKCSS+RGCPARKHVERC+EE SMLIVTYEGEHNH RI S
Sbjct: 282 RGYYKCSSVRGCPARKHVERCVEETSMLIVTYEGEHNHSRILS 324

[Close]
BLAST of Cp4.1LG12g11350 vs. Swiss-Prot
Match: WRKY1_MAIZE (Protein WRKY1 OS=Zea mays PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.8e-16
Identity = 35/44 (79.55%), Postives = 42/44 (95.45%), Query Frame = 1 

Query: 36  RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIASQ 80
           RGYYKCSS+RGCPARKHVERC+++PSMLIVTYEG+HNH R+ +Q
Sbjct: 352 RGYYKCSSVRGCPARKHVERCVDDPSMLIVTYEGDHNHNRVLAQ 395

[Close]
BLAST of Cp4.1LG12g11350 vs. Swiss-Prot
Match: WRK39_ARATH (Probable WRKY transcription factor 39 OS=Arabidopsis thaliana GN=WRKY39 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.3e-16
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 1 

Query: 36  RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIAS 79
           RGYYKCSS+RGCPARKHVERC++E SMLIVTYEGEHNH RI S
Sbjct: 282 RGYYKCSSVRGCPARKHVERCIDETSMLIVTYEGEHNHSRILS 324

[Close]
BLAST of Cp4.1LG12g11350 vs. Swiss-Prot
Match: WRK11_ARATH (Probable WRKY transcription factor 11 OS=Arabidopsis thaliana GN=WRKY11 PE=2 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 2.4e-13
Identity = 37/78 (47.44%), Postives = 53/78 (67.95%), Query Frame = 1 

Query: 7   LRAPGLKRKASSI--NNHTRKRFRVNNVEAR---RGYYKCSSMRGCPARKHVERCLEEPS 66
           +R P +  K + I  + ++ +++    ++     RGYYKCS+ RGCPARKHVER L++P+
Sbjct: 232 VRVPAISAKIADIPPDEYSWRKYGQKPIKGSPHPRGYYKCSTFRGCPARKHVERALDDPA 291

Query: 67  MLIVTYEGEHNHPRIASQ 80
           MLIVTYEGEH H + A Q
Sbjct: 292 MLIVTYEGEHRHNQSAMQ 309

[Close]
BLAST of Cp4.1LG12g11350 vs. TrEMBL
Match: A0A068U804_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00016162001 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.7e-18
Identity = 44/48 (91.67%), Postives = 45/48 (93.75%), Query Frame = 1 

Query: 36  RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIASQFPNT 84
           RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPR+ SQ  NT
Sbjct: 296 RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRLPSQSANT 343

[Close]
BLAST of Cp4.1LG12g11350 vs. TrEMBL
Match: E7CEY5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=WRKY51 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 5.0e-18
Identity = 48/82 (58.54%), Postives = 61/82 (74.39%), Query Frame = 1 

Query: 7   LRAPGLKRKASSI--NNHTRKRFRVNNVEAR---RGYYKCSSMRGCPARKHVERCLEEPS 66
           ++ P +  K + I  ++++ +++    ++     RGYYKCSSMRGCPARKHVERCLEEPS
Sbjct: 271 IKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPS 330

Query: 67  MLIVTYEGEHNHPRIASQFPNT 84
           MLIVTYEGEHNHPRI SQ  NT
Sbjct: 331 MLIVTYEGEHNHPRIPSQPANT 352

[Close]
BLAST of Cp4.1LG12g11350 vs. TrEMBL
Match: N1K0K3_CUCSA (WRKY transcription factor 21 OS=Cucumis sativus GN=WRKY-21 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 5.0e-18
Identity = 48/82 (58.54%), Postives = 61/82 (74.39%), Query Frame = 1 

Query: 7   LRAPGLKRKASSI--NNHTRKRFRVNNVEAR---RGYYKCSSMRGCPARKHVERCLEEPS 66
           ++ P +  K + I  ++++ +++    ++     RGYYKCSSMRGCPARKHVERCLEEPS
Sbjct: 271 IKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPS 330

Query: 67  MLIVTYEGEHNHPRIASQFPNT 84
           MLIVTYEGEHNHPRI SQ  NT
Sbjct: 331 MLIVTYEGEHNHPRIPSQPANT 352

[Close]
BLAST of Cp4.1LG12g11350 vs. TrEMBL
Match: A0A0V0IGC3_SOLCH (Putative WRKY transcription factor 21-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 6.5e-18
Identity = 43/47 (91.49%), Postives = 44/47 (93.62%), Query Frame = 1 

Query: 36  RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIASQFPN 83
           RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPR+ SQ  N
Sbjct: 299 RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRLPSQSAN 345

[Close]
BLAST of Cp4.1LG12g11350 vs. TrEMBL
Match: Q8GTG2_SOLLC (WRKY transcription factor IId-3 (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 6.5e-18
Identity = 43/47 (91.49%), Postives = 44/47 (93.62%), Query Frame = 1 

Query: 36 RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIASQFPN 83
          RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPR+ SQ  N
Sbjct: 8  RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRLPSQSAN 54

[Close]
BLAST of Cp4.1LG12g11350 vs. TAIR10
Match: AT2G30590.1 (AT2G30590.1 WRKY DNA-binding protein 21)

HSP 1 Score: 90.5 bits (223), Expect = 5.2e-19
Identity = 42/78 (53.85%), Postives = 58/78 (74.36%), Query Frame = 1 

Query: 7   LRAPGLKRKASSI--NNHTRKRFRVNNVEAR---RGYYKCSSMRGCPARKHVERCLEEPS 66
           +R P +  K + I  ++++ +++    ++     RGYYKCSSMRGCPARKHVERCLE+P+
Sbjct: 299 IRVPAISNKVADIPPDDYSWRKYGQKPIKGSPYPRGYYKCSSMRGCPARKHVERCLEDPA 358

Query: 67  MLIVTYEGEHNHPRIASQ 80
           MLIVTYE EHNHP++ SQ
Sbjct: 359 MLIVTYEAEHNHPKLPSQ 376

[Close]
BLAST of Cp4.1LG12g11350 vs. TAIR10
Match: AT5G28650.1 (AT5G28650.1 WRKY DNA-binding protein 74)

HSP 1 Score: 86.7 bits (213), Expect = 7.6e-18
Identity = 38/43 (88.37%), Postives = 40/43 (93.02%), Query Frame = 1 

Query: 36  RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIAS 79
           RGYYKCSS+RGCPARKHVERC+EE SMLIVTYEGEHNH RI S
Sbjct: 282 RGYYKCSSVRGCPARKHVERCVEETSMLIVTYEGEHNHSRILS 324

[Close]
BLAST of Cp4.1LG12g11350 vs. TAIR10
Match: AT3G04670.1 (AT3G04670.1 WRKY DNA-binding protein 39)

HSP 1 Score: 85.9 bits (211), Expect = 1.3e-17
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 1 

Query: 36  RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIAS 79
           RGYYKCSS+RGCPARKHVERC++E SMLIVTYEGEHNH RI S
Sbjct: 282 RGYYKCSSVRGCPARKHVERCIDETSMLIVTYEGEHNHSRILS 324

[Close]
BLAST of Cp4.1LG12g11350 vs. TAIR10
Match: AT4G31550.1 (AT4G31550.1 WRKY DNA-binding protein 11)

HSP 1 Score: 75.9 bits (185), Expect = 1.3e-14
Identity = 37/78 (47.44%), Postives = 53/78 (67.95%), Query Frame = 1 

Query: 7   LRAPGLKRKASSI--NNHTRKRFRVNNVEAR---RGYYKCSSMRGCPARKHVERCLEEPS 66
           +R P +  K + I  + ++ +++    ++     RGYYKCS+ RGCPARKHVER L++P+
Sbjct: 232 VRVPAISAKIADIPPDEYSWRKYGQKPIKGSPHPRGYYKCSTFRGCPARKHVERALDDPA 291

Query: 67  MLIVTYEGEHNHPRIASQ 80
           MLIVTYEGEH H + A Q
Sbjct: 292 MLIVTYEGEHRHNQSAMQ 309

[Close]
BLAST of Cp4.1LG12g11350 vs. TAIR10
Match: AT4G24240.1 (AT4G24240.1 WRKY DNA-binding protein 7)

HSP 1 Score: 74.3 bits (181), Expect = 3.9e-14
Identity = 31/38 (81.58%), Postives = 35/38 (92.11%), Query Frame = 1 

Query: 36  RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNH 74
           RGYYKCSS+RGCPARKHVER L++  MLIVTYEG+HNH
Sbjct: 301 RGYYKCSSVRGCPARKHVERALDDAMMLIVTYEGDHNH 338

[Close]
BLAST of Cp4.1LG12g11350 vs. NCBI nr
Match: gi|747066621|ref|XP_011080000.1| (PREDICTED: probable WRKY transcription factor 21 isoform X1 [Sesamum indicum])

HSP 1 Score: 99.8 bits (247), Expect = 2.4e-18
Identity = 44/48 (91.67%), Postives = 45/48 (93.75%), Query Frame = 1 

Query: 36  RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIASQFPNT 84
           RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPR+ SQ  NT
Sbjct: 298 RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRLPSQSANT 345

[Close]
BLAST of Cp4.1LG12g11350 vs. NCBI nr
Match: gi|661892545|emb|CDP03703.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 99.8 bits (247), Expect = 2.4e-18
Identity = 44/48 (91.67%), Postives = 45/48 (93.75%), Query Frame = 1 

Query: 36  RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIASQFPNT 84
           RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPR+ SQ  NT
Sbjct: 296 RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRLPSQSANT 343

[Close]
BLAST of Cp4.1LG12g11350 vs. NCBI nr
Match: gi|747071489|ref|XP_011082616.1| (PREDICTED: probable WRKY transcription factor 21 [Sesamum indicum])

HSP 1 Score: 98.6 bits (244), Expect = 5.5e-18
Identity = 43/48 (89.58%), Postives = 45/48 (93.75%), Query Frame = 1 

Query: 36  RGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIASQFPNT 84
           RGYYKCSSMRGCPARKHVERCLE+PSMLIVTYEGEHNHPR+ SQ  NT
Sbjct: 289 RGYYKCSSMRGCPARKHVERCLEDPSMLIVTYEGEHNHPRLPSQSANT 336

[Close]
BLAST of Cp4.1LG12g11350 vs. NCBI nr
Match: gi|1009147608|ref|XP_015891502.1| (PREDICTED: probable WRKY transcription factor 21 [Ziziphus jujuba])

HSP 1 Score: 98.2 bits (243), Expect = 7.1e-18
Identity = 47/82 (57.32%), Postives = 61/82 (74.39%), Query Frame = 1 

Query: 7   LRAPGLKRKASSI--NNHTRKRFRVNNVEAR---RGYYKCSSMRGCPARKHVERCLEEPS 66
           ++ P +  K + I  ++++ +++    ++     RGYYKCSSMRGCPARKHVERCLEEPS
Sbjct: 279 IKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPS 338

Query: 67  MLIVTYEGEHNHPRIASQFPNT 84
           MLIVTYEGEHNHPR+ SQ  NT
Sbjct: 339 MLIVTYEGEHNHPRMTSQSANT 360

[Close]
BLAST of Cp4.1LG12g11350 vs. NCBI nr
Match: gi|484306449|emb|CCV01211.1| (WRKY transcription factor 21 [Cucumis sativus])

HSP 1 Score: 98.2 bits (243), Expect = 7.1e-18
Identity = 48/82 (58.54%), Postives = 61/82 (74.39%), Query Frame = 1 

Query: 7   LRAPGLKRKASSI--NNHTRKRFRVNNVEAR---RGYYKCSSMRGCPARKHVERCLEEPS 66
           ++ P +  K + I  ++++ +++    ++     RGYYKCSSMRGCPARKHVERCLEEPS
Sbjct: 271 IKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPS 330

Query: 67  MLIVTYEGEHNHPRIASQFPNT 84
           MLIVTYEGEHNHPRI SQ  NT
Sbjct: 331 MLIVTYEGEHNHPRIPSQPANT 352

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g11350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
WRK21_ARATH9.3e-1853.85Probable WRKY transcription factor 21 OS=Arabidopsis thaliana GN=WRKY21 PE=2 SV=... [more]
WRK74_ARATH1.3e-1688.37Probable WRKY transcription factor 74 OS=Arabidopsis thaliana GN=WRKY74 PE=2 SV=... [more]
WRKY1_MAIZE1.8e-1679.55Protein WRKY1 OS=Zea mays PE=1 SV=1[more]
WRK39_ARATH2.3e-1686.05Probable WRKY transcription factor 39 OS=Arabidopsis thaliana GN=WRKY39 PE=2 SV=... [more]
WRK11_ARATH2.4e-1347.44Probable WRKY transcription factor 11 OS=Arabidopsis thaliana GN=WRKY11 PE=2 SV=... [more]
BLAST of Cp4.1LG12g11350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A068U804_COFCA1.7e-1891.67Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00016162001 PE=4 SV=1[more]
E7CEY5_CUCSA5.0e-1858.54Uncharacterized protein OS=Cucumis sativus GN=WRKY51 PE=2 SV=1[more]
N1K0K3_CUCSA5.0e-1858.54WRKY transcription factor 21 OS=Cucumis sativus GN=WRKY-21 PE=2 SV=1[more]
A0A0V0IGC3_SOLCH6.5e-1891.49Putative WRKY transcription factor 21-like OS=Solanum chacoense PE=4 SV=1[more]
Q8GTG2_SOLLC6.5e-1891.49WRKY transcription factor IId-3 (Fragment) OS=Solanum lycopersicum PE=2 SV=1[more]
BLAST of Cp4.1LG12g11350 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G30590.15.2e-1953.85 WRKY DNA-binding protein 21[more]
AT5G28650.17.6e-1888.37 WRKY DNA-binding protein 74[more]
AT3G04670.11.3e-1786.05 WRKY DNA-binding protein 39[more]
AT4G31550.11.3e-1447.44 WRKY DNA-binding protein 11[more]
AT4G24240.13.9e-1481.58 WRKY DNA-binding protein 7[more]
BLAST of Cp4.1LG12g11350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|747066621|ref|XP_011080000.1|2.4e-1891.67PREDICTED: probable WRKY transcription factor 21 isoform X1 [Sesamum indicum][more]
gi|661892545|emb|CDP03703.1|2.4e-1891.67unnamed protein product [Coffea canephora][more]
gi|747071489|ref|XP_011082616.1|5.5e-1889.58PREDICTED: probable WRKY transcription factor 21 [Sesamum indicum][more]
gi|1009147608|ref|XP_015891502.1|7.1e-1857.32PREDICTED: probable WRKY transcription factor 21 [Ziziphus jujuba][more]
gi|484306449|emb|CCV01211.1|7.1e-1858.54WRKY transcription factor 21 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003657WRKY_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g11350.1Cp4.1LG12g11350.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003657WRKY domainGENE3DG3DSA:2.20.25.80coord: 29..75
score: 5.1
IPR003657WRKY domainPFAMPF03106WRKYcoord: 29..74
score: 5.7
IPR003657WRKY domainSMARTSM00774WRKY_clscoord: 28..75
score: 2.3
IPR003657WRKY domainPROFILEPS50811WRKYcoord: 36..76
score: 17
IPR003657WRKY domainunknownSSF118290WRKY DNA-binding domaincoord: 29..75
score: 2.88
NoneNo IPR availablePANTHERPTHR31282FAMILY NOT NAMEDcoord: 36..83
score: 5.8
NoneNo IPR availablePANTHERPTHR31282:SF6WRKY TRANSCRIPTION FACTOR 21-RELATEDcoord: 36..83
score: 5.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g11350MELO3C015776.2Melon (DHL92) v3.6.1cpemedB147
Cp4.1LG12g11350CsaV3_7G027490Cucumber (Chinese Long) v3cpecucB0189
Cp4.1LG12g11350Bhi05G000195Wax gourdcpewgoB0197
Cp4.1LG12g11350Bhi09G000937Wax gourdcpewgoB0203
Cp4.1LG12g11350CsGy7G014270Cucumber (Gy14) v2cgybcpeB906
Cp4.1LG12g11350Carg25782Silver-seed gourdcarcpeB1371
Cp4.1LG12g11350Carg07291Silver-seed gourdcarcpeB0158
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g11350Cp4.1LG17g06230Cucurbita pepo (Zucchini)cpecpeB176
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g11350Cucurbita pepo (Zucchini)cpecpeB157
Cp4.1LG12g11350Cucumber (Gy14) v1cgycpeB1028
Cp4.1LG12g11350Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g11350Cucurbita maxima (Rimu)cmacpeB902
Cp4.1LG12g11350Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g11350Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g11350Wild cucumber (PI 183967)cpecpiB162
Cp4.1LG12g11350Wild cucumber (PI 183967)cpecpiB163
Cp4.1LG12g11350Cucumber (Chinese Long) v2cpecuB160
Cp4.1LG12g11350Cucumber (Chinese Long) v2cpecuB161
Cp4.1LG12g11350Bottle gourd (USVL1VR-Ls)cpelsiB113
Cp4.1LG12g11350Watermelon (Charleston Gray)cpewcgB126
Cp4.1LG12g11350Watermelon (97103) v1cpewmB131
Cp4.1LG12g11350Melon (DHL92) v3.5.1cpemeB119
Cp4.1LG12g11350Melon (DHL92) v3.5.1cpemeB122
Cp4.1LG12g11350Melon (DHL92) v3.5.1cpemeB124
Cp4.1LG12g11350Melon (DHL92) v3.6.1cpemedB151
Cp4.1LG12g11350Cucumber (Chinese Long) v3cpecucB0185