Cp4.1LG12g11040 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g11040
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Zinc finger family protein
Location	Cp4.1LG12 : 9004591 .. 9005451 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGTGGTCGGCGGAGGATTACGCTTTACGATCAGATGTTAGCGGTCGGCGATGGCAGAGAGTTCGCCCGTGGTTTGACACTCAACGACGTTTTGACCATTCATAACAGAGCTTCGCCGAGCCCTTCGCCGGCTGTGAGACTAAGCGGCCGGACTTTGCTCGATATTATAAGAGACGACGTTGGGATATCTCCTGTTGATAACCGAGAGAGGAAATCTTGGAAGTTTTTGAGAGATCGCCTTCGTTTGAATCTCAGATCTCAAATTCTGCCGCCGAATTCGCTTCGTATACCTAGTTTTTCGTCGGCGGAAATGATGCCAAACGAAGAAGAATCGTCGGAATCCACCACCACCACTGCTGCCGCCCCGTCTCTCCGGCAGATTTCACGGCGGAGCTCGTCGCGGTTAAGCCTGAACGCGAGGCCAAAGTCCGAGGCTGCAAATTCCGGCGATACTCCAGAAAACAACAATTCCTCCACCGCTTCCGGCTCCGGCAGTAGGCGGAGCCTCCAAAAGCCACAAATGTCGCGGCACAACTCGACGAGATTCAACCTAGAACGGAGCGAGAGTTTCACGGACTTGTCTGATCCAGCGCGTGACGGCCCGCGCCGTCTCTCGGCTGCGCTTGCAATGGAGAGATCGATGTCAGCTAGAGAAACAGTGGTGGCTCAAGAAGCCGCCGACGCAGAAAGCACCGCCCACGAAGAAGAACAAGAAGAAGAACAAGAAGAAGAACAGGAACAACTAGAACAACAAGAATCCAGCGCGGCGGCGCCGGTGAGAATGTCACTTATGGATCTGTTAGATGAAACGGACAGGAAAATGGGGTTGGAAGNTTTTTGTTCTTTTCTTGTTTAA

mRNA sequence

ATGGAAGGTGGTCGGCGGAGGATTACGCTTTACGATCAGATGTTAGCGGTCGGCGATGGCAGAGAGTTCGCCCGTGGTTTGACACTCAACGACGTTTTGACCATTCATAACAGAGCTTCGCCGAGCCCTTCGCCGGCTGTGAGACTAAGCGGCCGGACTTTGCTCGATATTATAAGAGACGACGTTGGGATATCTCCTGTTGATAACCGAGAGAGGAAATCTTGGAAGTTTTTGAGAGATCGCCTTCGTTTGAATCTCAGATCTCAAATTCTGCCGCCGAATTCGCTTCGTATACCTAGTTTTTCGTCGGCGGAAATGATGCCAAACGAAGAAGAATCGTCGGAATCCACCACCACCACTGCTGCCGCCCCGTCTCTCCGGCAGATTTCACGGCGGAGCTCGTCGCGGTTAAGCCTGAACGCGAGGCCAAAGTCCGAGGCTGCAAATTCCGGCGATACTCCAGAAAACAACAATTCCTCCACCGCTTCCGGCTCCGGCAGTAGGCGGAGCCTCCAAAAGCCACAAATGTCGCGGCACAACTCGACGAGATTCAACCTAGAACGGAGCGAGAGTTTCACGGACTTGTCTGATCCAGCGCGTGACGGCCCGCGCCGTCTCTCGGCTGCGCTTGCAATGGAGAGATCGATGTCAGCTAGAGAAACAGTGGTGGCTCAAGAAGCCGCCGACGCAGAAAGCACCGCCCACGAAGAAGAACAAGAAGAAGAACAAGAAGAAGAACAGGAACAACTAGAACAACAAGAATCCAGCGCGGCGGCGCCGGTGAGAATGTCACTTATGGATCTGTTAGATGAAACGGACAGGAAAATGGGGTTGGAAGNTTTTTGTTCTTTTCTTGTTTAA

Coding sequence (CDS)

ATGGAAGGTGGTCGGCGGAGGATTACGCTTTACGATCAGATGTTAGCGGTCGGCGATGGCAGAGAGTTCGCCCGTGGTTTGACACTCAACGACGTTTTGACCATTCATAACAGAGCTTCGCCGAGCCCTTCGCCGGCTGTGAGACTAAGCGGCCGGACTTTGCTCGATATTATAAGAGACGACGTTGGGATATCTCCTGTTGATAACCGAGAGAGGAAATCTTGGAAGTTTTTGAGAGATCGCCTTCGTTTGAATCTCAGATCTCAAATTCTGCCGCCGAATTCGCTTCGTATACCTAGTTTTTCGTCGGCGGAAATGATGCCAAACGAAGAAGAATCGTCGGAATCCACCACCACCACTGCTGCCGCCCCGTCTCTCCGGCAGATTTCACGGCGGAGCTCGTCGCGGTTAAGCCTGAACGCGAGGCCAAAGTCCGAGGCTGCAAATTCCGGCGATACTCCAGAAAACAACAATTCCTCCACCGCTTCCGGCTCCGGCAGTAGGCGGAGCCTCCAAAAGCCACAAATGTCGCGGCACAACTCGACGAGATTCAACCTAGAACGGAGCGAGAGTTTCACGGACTTGTCTGATCCAGCGCGTGACGGCCCGCGCCGTCTCTCGGCTGCGCTTGCAATGGAGAGATCGATGTCAGCTAGAGAAACAGTGGTGGCTCAAGAAGCCGCCGACGCAGAAAGCACCGCCCACGAAGAAGAACAAGAAGAAGAACAAGAAGAAGAACAGGAACAACTAGAACAACAAGAATCCAGCGCGGCGGCGCCGGTGAGAATGTCACTTATGGATCTGTTAGATGAAACGGACAGGAAAATGGGGTTGGAAGNTTTTTGTTCTTTTCTTGTTTAA

Protein sequence

MEGGRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLSGRTLLDIIRDDVGISPVDNRERKSWKFLRDRLRLNLRSQILPPNSLRIPSFSSAEMMPNEEESSESTTTTAAAPSLRQISRRSSSRLSLNARPKSEAANSGDTPENNNSSTASGSGSRRSLQKPQMSRHNSTRFNLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTAHEEEQEEEQEEEQEQLEQQESSAAAPVRMSLMDLLDETDRKMGLEXFCSFLV

Homology

[Close]

BLAST of Cp4.1LG12g11040 vs. TrEMBL
Match: A0A0A0K6R9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G342770 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.9e-88
Identity = 198/281 (70.46%), Postives = 224/281 (79.72%), Query Frame = 1


Query: 1   MEGGRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLSGRTLLDIIRD 60
           MEGGRRRITLYDQMLAV DGR+ A G TLNDVL I  RA PS SPAVRL GRTLLDIIRD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD 60

Query: 61  DVGISPVDNRERKSWKFLRDRLRLNLRSQILPPNSLRIPSFSSAEMMPNEEESSESTTTT 120
           DVG SPV NRER SWKF RDRLRL++RSQI P NSLR P  +SAEMM N+E S E TTT 
Sbjct: 61  DVGKSPVSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTTA 120

Query: 121 A--AAPSLRQISRRSSSRLSLNARPKSEAANSGDTPENNNSSTASGSGSRRSLQKPQMSR 180
           A  AAPSLRQISRR+S+RL+ + +P SEA NS  +P+NN+++ ASGSG  RSL +PQMSR
Sbjct: 121 AVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASPDNNSAAAASGSGG-RSLLRPQMSR 180

Query: 181 HNSTRFNLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTAHEEE 240
           HNSTRF++ERSESFTDL++P R+G RRLSAALA ERSMSARE V AQEAADAE+T  EEE
Sbjct: 181 HNSTRFSVERSESFTDLTEPTREGTRRLSAALAEERSMSAREAVTAQEAADAEATVDEEE 240

Query: 241 QEEEQEEEQEQLEQQESSAAAPVRMSLMDLLDETDRKMGLE 280
           Q++EQ  E         S  APVRMSLMDLL+ETDR+MG E
Sbjct: 241 QQQEQVAE---------STPAPVRMSLMDLLEETDRQMGFE 271

[Close]

BLAST of Cp4.1LG12g11040 vs. TrEMBL
Match: V4T971_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020442mg PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.3e-32
Identity = 130/296 (43.92%), Postives = 164/296 (55.41%), Query Frame = 1


Query: 6   RRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLSGRTLLDIIRD-DVGI 65
           RRITL DQM AV D R+   GLTL+ +LT + R SP  +PA    GRTLLDIIRD D   
Sbjct: 20  RRITLLDQMSAVQDRRDPLAGLTLDAILT-NKRPSPPRAPA----GRTLLDIIRDEDPNG 79

Query: 66  SPVDNRERKSWKFLRDRLRLN------LRSQILPPNSLRIPSFSSAEMMPNEE---ESSE 125
               +++RKSWK  RDRLRL         S  +P + + IPS S +   P  +    SS 
Sbjct: 80  KNFGHKDRKSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRRSSV 139

Query: 126 STTTTAAAPSLRQISRRSSSRLSLNARPKSEAANS--GDTPENNNSSTASGSGS-RRSLQ 185
              T  A     Q+            RP S+ A+S  G T  +++  +  G GS  RS +
Sbjct: 140 RFQTNPAGELASQLEDNRGPPPQFARRPSSKVASSSPGPTQSSHHEDSPEGEGSPTRSSR 199

Query: 186 KPQMSRHNSTRF----NLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAA 245
           +PQ+SRHNSTR     N    ++  D  D AR+G RRL+  LA ER +SARE V AQEAA
Sbjct: 200 QPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAREAVAAQEAA 259

Query: 246 DAESTAHEEEQEEEQEEEQEQLEQQESSAAAPV-----RMSLMDLLDETDRKMGLE 280
           +AE+ A   E E E E E     + E+ AA PV     RMSLMDLL+ETDR+MGLE
Sbjct: 260 EAEAAAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQMGLE 310

[Close]

BLAST of Cp4.1LG12g11040 vs. TrEMBL
Match: W9SC41_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003042 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 5.1e-30
Identity = 125/313 (39.94%), Postives = 166/313 (53.04%), Query Frame = 1


Query: 3   GGRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLS-------GRTLL 62
           G  RRITL DQM A+ DG + + GLTL+D+L    RA P P P            GRTLL
Sbjct: 11  GSGRRITLLDQMSAIADGGDLS-GLTLDDILRSRKRAVPEPPPPPPFPSEPPIQPGRTLL 70

Query: 63  DIIRDDVGISP-----VDNRERKSWKFLRDRLRL-----------------------NLR 122
           DIIRD+   +      V NR+RKSWK  +DRLRL                       + R
Sbjct: 71  DIIRDEDPKASSCKEFVGNRDRKSWKSFKDRLRLKRTGSGAAWTSSVHIPTSDILSPSTR 130

Query: 123 SQILPPNSLRIPSFSSAEMMPNEEESSESTTTTAAAPSLRQISRRSSSRLSLNARPKSEA 182
           SQ+   +S R  + S+ EM+P E+ SS+      +      +SRRSS R S NA   S+ 
Sbjct: 131 SQVSRRSSARNSTESAHEMIPLEDASSQGFRPHIS------LSRRSSCRFSPNALFASDP 190

Query: 183 ANSGDTPENNNSSTASGSGSRRSLQKPQMSRHNSTRFNLERSESFTDLSDPA---RDGPR 242
           A S D   NNN++ +    ++    +PQ+SR +STRF+    +S TD ++P    R+G R
Sbjct: 191 ALSDDGSNNNNNNNSGAPPAQVPTLRPQISRRHSTRFSPVIEDSVTDPTEPPPPMREGSR 250

Query: 243 RLSAALAMERSMSARETVVAQEAADAESTAHEEEQEEEQEEEQEQLEQQESSAAAPVRMS 278
           RL A LA ERS+SARE V AQEAA+  + A     +E     +        +   PVRMS
Sbjct: 251 RLYAVLAEERSLSAREAVAAQEAAEEAAAAAAAAADEAVSTAEAAATPVAETGPQPVRMS 310

[Close]

BLAST of Cp4.1LG12g11040 vs. TrEMBL
Match: A0A067FRX5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017330mg PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.2e-28
Identity = 124/288 (43.06%), Postives = 160/288 (55.56%), Query Frame = 1


Query: 14  MLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLSGRTLLDIIRD-DVGISPVDNRER 73
           M AV D R+   GLTL+ +LT + R SP P+PA    GRTLLDIIRD D       +++R
Sbjct: 1   MSAVQDRRDPLAGLTLDAILT-NKRPSPPPAPA----GRTLLDIIRDEDPNGKNFGHKDR 60

Query: 74  KSWKFLRDRLRLN------LRSQILPPNSLRIPSFSSAEMMPNEE---ESSESTTTTAAA 133
           KSWK  RDRLRL         S  +P + + IPS S +   P  +    SS    T  A 
Sbjct: 61  KSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRRSSVRFQTNPAG 120

Query: 134 PSLRQISRRSSSRLSLNARPKSEAANS--GDTPENNNSSTASGSGS-RRSLQKPQMSRHN 193
               Q+     +      RP S+ A+S  G T  +++  +  G GS  RS ++PQ+SRHN
Sbjct: 121 ELASQLEDNRGAPPQFARRPSSKVASSSPGPTQSSHHEDSPEGEGSPTRSSRQPQLSRHN 180

Query: 194 STRF----NLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTAHE 253
           STR     N    ++  D  D AR+G RRL+  LA ER +SARE V AQEAA+AE+ A E
Sbjct: 181 STRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAREAVAAQEAAEAEAAAAE 240

Query: 254 EEQEEEQEEEQEQLEQQESSAAAPV-----RMSLMDLLDETDRKMGLE 280
            E E E E   +   + E+ AA PV     RMSLMDLL+ETDR+MGLE
Sbjct: 241 AEAEAEAEASVQV--EAEAEAAEPVQPRQPRMSLMDLLEETDRQMGLE 281

[Close]

BLAST of Cp4.1LG12g11040 vs. TrEMBL
Match: A0A0D2QUT8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G233400 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.4e-19
Identity = 112/290 (38.62%), Postives = 150/290 (51.72%), Query Frame = 1


Query: 1   MEGG-RRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLSGRTLLDIIR 60
           MEGG RRR+TL++Q+ AV +GR+   GLTL+ VL   N   P   PA     RTLL+IIR
Sbjct: 1   MEGGNRRRLTLFEQISAVENGRDALAGLTLDAVLG--NAKRPEQPPA---QNRTLLEIIR 60

Query: 61  DDVGISPVDNRERKSWKFLRDRLRLNLRSQILPPNSLRIPSFSSAEMMPNEEESSESTTT 120
           DD       N+ +KSWK LRD+LRL   +     +S+RIP+   ++++ N+   S+ +  
Sbjct: 61  DDGS-----NKGKKSWKALRDKLRLKRLAVSARTSSVRIPA---SDVIVNDNNRSQFS-- 120

Query: 121 TAAAPSLRQISRRSSSRLSLNARPKSEAANSGDTPENNNSSTASGSGSRRSLQ--KPQMS 180
                  RQ S RS S        +  +A   D    N+    +  GS R +Q  + ++S
Sbjct: 121 -------RQGSFRSHSADPTGVEDRGGSAPVSDPTVMNSRPQLARFGSGRFVQDHESEIS 180

Query: 181 RH--------NSTRFNLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAAD 240
           R         N+ R N + SE   D S  ARD  RRL AAL  ER++SARE   AQEAA 
Sbjct: 181 RQHLTPFPSSNNARNNADSSEDEDDDSPVARDETRRLGAALEEERALSAREAAAAQEAAT 240

Query: 241 -AESTAHEEEQEEEQEEEQEQLEQQESSAAAPVRMSLMDLLDETDRKMGL 279
            AE+ A      EE                 PVRMSLMD L+ET+R+MGL
Sbjct: 241 VAETNARPIGSTEE-----------------PVRMSLMDFLEETERQMGL 251

[Close]

BLAST of Cp4.1LG12g11040 vs. TAIR10
Match: AT3G07120.1 (AT3G07120.1 RING/U-box superfamily protein)

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-12
Identity = 88/276 (31.88%), Postives = 143/276 (51.81%), Query Frame = 1


Query: 26  GLTLNDVL----TIHNRASPSPSPAV-------RLSGRTLLDIIRDDVGISPVDNRERKS 85
           GL+L+ VL     I   + PSP P         R + +TL DIIR++   +   +++R +
Sbjct: 13  GLSLDAVLGGEILIEPPSLPSPPPLPSKSLVPHRPTSQTLFDIIREEY--AKEGHKDRTT 72

Query: 86  WKFLRDRLRLNLRSQILPPNSLRIPSFSSAEMMPNEEESSESTTTTAAAPSLRQISRR-- 145
           W+  R++LRL  R+     +SL IP+  S  ++PN +    +  + +A  ++R +     
Sbjct: 73  WQIFREKLRLK-RTGSAWTSSLHIPA--SDILIPNPKHIGTAFRSHSAGLNIRDLVHAIP 132

Query: 146 -----SSSRLSLNARPKSEAANSGDTPENNNSSTASGSGSRRSLQKPQMSRHNSTRFNLE 205
                 SS  ++  R  S    S   P+++   +    G      KPQ+SRH+S R + E
Sbjct: 133 MSDPPGSSGRAMFTRGSSMRVGSSKNPDDSPDISVLEDGPPSRSFKPQLSRHDSVRDHSE 192

Query: 206 RSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTA---HEEEQEEEQE 265
             E+         +  R        ER MSARE V AQEAA+AE+ A    E+E ++++E
Sbjct: 193 GEEN---------NRRRHPIVTFVEERQMSAREAVAAQEAAEAEAAAAGGSEDEDDDDEE 252

Query: 266 EEQEQLEQQESSAAAPVR--MSLMDLLDETDRKMGL 279
           ++  + E+ +SS+A+  +  MSLMDLL+ETDR+MGL
Sbjct: 253 DDSGETEEMKSSSASEPKQTMSLMDLLEETDRQMGL 274

[Close]

BLAST of Cp4.1LG12g11040 vs. NCBI nr
Match: gi|659116324|ref|XP_008458019.1| (PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis melo])

HSP 1 Score: 355.1 bits (910), Expect = 1.1e-94
Identity = 208/281 (74.02%), Postives = 232/281 (82.56%), Query Frame = 1


Query: 1   MEGGRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLSGRTLLDIIRD 60
           MEGGRRRITLYDQMLAV DGRE A G TLNDVLTI  RASPSPSPAVRL GRTLLDIIRD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRELASGFTLNDVLTIQKRASPSPSPAVRLHGRTLLDIIRD 60

Query: 61  DVGISPVDNRERKSWKFLRDRLRLNLRSQILPPNSLRIPSFSSAEMMPNEEESSESTTTT 120
           DVG SPV NRERKSWKFLRDRLRLNLRSQI PPNSLR P F+SA+MMPN+E+S E TTT 
Sbjct: 61  DVGKSPVSNRERKSWKFLRDRLRLNLRSQIPPPNSLRFPGFTSADMMPNDEQSPEPTTTA 120

Query: 121 A--AAPSLRQISRRSSSRLSLNARPKSEAANSGDTPENNNSSTASGSGSRRSLQKPQMSR 180
           A  AAPSLRQISRR+S+R + +  P SEA NS  +P+NN+++ ASG+G  RSL +PQMSR
Sbjct: 121 AVSAAPSLRQISRRNSTRFNPSVPPSSEATNSDASPDNNSAAAASGAGG-RSLLRPQMSR 180

Query: 181 HNSTRFNLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTAHEEE 240
           HNSTRF++ERSESFTDL++PAR+G RRLSAALA ERSMSARE V AQEAADAE+ A  EE
Sbjct: 181 HNSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEAIADVEE 240

Query: 241 QEEEQEEEQEQLEQQESSAAAPVRMSLMDLLDETDRKMGLE 280
           QEEEQE E         S  AP+RMSLMDLL+ETDR+MG E
Sbjct: 241 QEEEQEAE---------STPAPMRMSLMDLLEETDRQMGFE 271

[Close]

BLAST of Cp4.1LG12g11040 vs. NCBI nr
Match: gi|778726974|ref|XP_011659191.1| (PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Cucumis sativus])

HSP 1 Score: 334.0 bits (855), Expect = 2.7e-88
Identity = 198/281 (70.46%), Postives = 224/281 (79.72%), Query Frame = 1


Query: 1   MEGGRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLSGRTLLDIIRD 60
           MEGGRRRITLYDQMLAV DGR+ A G TLNDVL I  RA PS SPAVRL GRTLLDIIRD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD 60

Query: 61  DVGISPVDNRERKSWKFLRDRLRLNLRSQILPPNSLRIPSFSSAEMMPNEEESSESTTTT 120
           DVG SPV NRER SWKF RDRLRL++RSQI P NSLR P  +SAEMM N+E S E TTT 
Sbjct: 61  DVGKSPVSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTTA 120

Query: 121 A--AAPSLRQISRRSSSRLSLNARPKSEAANSGDTPENNNSSTASGSGSRRSLQKPQMSR 180
           A  AAPSLRQISRR+S+RL+ + +P SEA NS  +P+NN+++ ASGSG  RSL +PQMSR
Sbjct: 121 AVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASPDNNSAAAASGSGG-RSLLRPQMSR 180

Query: 181 HNSTRFNLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTAHEEE 240
           HNSTRF++ERSESFTDL++P R+G RRLSAALA ERSMSARE V AQEAADAE+T  EEE
Sbjct: 181 HNSTRFSVERSESFTDLTEPTREGTRRLSAALAEERSMSAREAVTAQEAADAEATVDEEE 240

Query: 241 QEEEQEEEQEQLEQQESSAAAPVRMSLMDLLDETDRKMGLE 280
           Q++EQ  E         S  APVRMSLMDLL+ETDR+MG E
Sbjct: 241 QQQEQVAE---------STPAPVRMSLMDLLEETDRQMGFE 271

[Close]

BLAST of Cp4.1LG12g11040 vs. NCBI nr
Match: gi|567902210|ref|XP_006443593.1| (hypothetical protein CICLE_v10020442mg [Citrus clementina])

HSP 1 Score: 145.6 bits (366), Expect = 1.3e-31
Identity = 130/296 (43.92%), Postives = 164/296 (55.41%), Query Frame = 1


Query: 6   RRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLSGRTLLDIIRD-DVGI 65
           RRITL DQM AV D R+   GLTL+ +LT + R SP  +PA    GRTLLDIIRD D   
Sbjct: 20  RRITLLDQMSAVQDRRDPLAGLTLDAILT-NKRPSPPRAPA----GRTLLDIIRDEDPNG 79

Query: 66  SPVDNRERKSWKFLRDRLRLN------LRSQILPPNSLRIPSFSSAEMMPNEE---ESSE 125
               +++RKSWK  RDRLRL         S  +P + + IPS S +   P  +    SS 
Sbjct: 80  KNFGHKDRKSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRRSSV 139

Query: 126 STTTTAAAPSLRQISRRSSSRLSLNARPKSEAANS--GDTPENNNSSTASGSGS-RRSLQ 185
              T  A     Q+            RP S+ A+S  G T  +++  +  G GS  RS +
Sbjct: 140 RFQTNPAGELASQLEDNRGPPPQFARRPSSKVASSSPGPTQSSHHEDSPEGEGSPTRSSR 199

Query: 186 KPQMSRHNSTRF----NLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAA 245
           +PQ+SRHNSTR     N    ++  D  D AR+G RRL+  LA ER +SARE V AQEAA
Sbjct: 200 QPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAREAVAAQEAA 259

Query: 246 DAESTAHEEEQEEEQEEEQEQLEQQESSAAAPV-----RMSLMDLLDETDRKMGLE 280
           +AE+ A   E E E E E     + E+ AA PV     RMSLMDLL+ETDR+MGLE
Sbjct: 260 EAEAAAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQMGLE 310

[Close]

BLAST of Cp4.1LG12g11040 vs. NCBI nr
Match: gi|1009149507|ref|XP_015892515.1| (PREDICTED: uncharacterized protein LOC107426760 [Ziziphus jujuba])

HSP 1 Score: 140.2 bits (352), Expect = 5.6e-30
Identity = 135/322 (41.93%), Postives = 168/322 (52.17%), Query Frame = 1


Query: 1   MEGG-------RRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAV--RLSG 60
           MEGG       RRR+TL DQM A  D R+ A GLTL+DVL    R  P+P PA     SG
Sbjct: 44  MEGGGGRLSSDRRRVTLLDQMSAAADSRDLA-GLTLDDVLGTEKRPVPAPPPAPPRSQSG 103

Query: 61  RTLLDIIRDDVGISPV----DNRERKSWKFLRDRLRL---------------------NL 120
           RTLLDIIRD+   S       NR++K+WK  +DRLRL                     N 
Sbjct: 104 RTLLDIIRDEEPKSGTFKGFSNRDKKAWKSFKDRLRLKRAGNAWNSSAPIPASDIRILNH 163

Query: 121 RSQILPPNSLR-----IPSFSSAEMM-PNEEESSESTTTTAAAPSLR---QISRRSSSRL 180
           RS +L  NS+      +P+ S   M  PNE            AP      QISRR S+R 
Sbjct: 164 RSLLLRHNSVNFHTASLPTVSRHNMAYPNENPVDIPAVGDMMAPPNNGRPQISRRGSTRF 223

Query: 181 SLNARPKSEAANSGDTPENNNSSTASGSGSRRSLQKPQMSRHNSTRFNLERSESFTDLSD 240
                     A S D   N++    +G  + R    PQ+SR +S RF L   ++  D +D
Sbjct: 224 G---------AFSSD---NSDDDVLAGQNTTR----PQISRRHSVRFALSSDDNVGDQTD 283

Query: 241 PA-RDGPRRLSAALAMERSMSARETVVAQEAADAESTAHEEEQEEEQEEEQEQLEQQESS 279
           P  R+G RRLSAALA ERS+SARE V AQEAA+AE+ A     E+E E+E  +   +   
Sbjct: 284 PPQREGSRRLSAALADERSLSAREAVAAQEAAEAEAAAAAAAAEQEAEDEDGESAPEGGE 343

[Close]

BLAST of Cp4.1LG12g11040 vs. NCBI nr
Match: gi|703151216|ref|XP_010110062.1| (hypothetical protein L484_003042 [Morus notabilis])

HSP 1 Score: 139.8 bits (351), Expect = 7.4e-30
Identity = 125/313 (39.94%), Postives = 166/313 (53.04%), Query Frame = 1


Query: 3   GGRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLS-------GRTLL 62
           G  RRITL DQM A+ DG + + GLTL+D+L    RA P P P            GRTLL
Sbjct: 11  GSGRRITLLDQMSAIADGGDLS-GLTLDDILRSRKRAVPEPPPPPPFPSEPPIQPGRTLL 70

Query: 63  DIIRDDVGISP-----VDNRERKSWKFLRDRLRL-----------------------NLR 122
           DIIRD+   +      V NR+RKSWK  +DRLRL                       + R
Sbjct: 71  DIIRDEDPKASSCKEFVGNRDRKSWKSFKDRLRLKRTGSGAAWTSSVHIPTSDILSPSTR 130

Query: 123 SQILPPNSLRIPSFSSAEMMPNEEESSESTTTTAAAPSLRQISRRSSSRLSLNARPKSEA 182
           SQ+   +S R  + S+ EM+P E+ SS+      +      +SRRSS R S NA   S+ 
Sbjct: 131 SQVSRRSSARNSTESAHEMIPLEDASSQGFRPHIS------LSRRSSCRFSPNALFASDP 190

Query: 183 ANSGDTPENNNSSTASGSGSRRSLQKPQMSRHNSTRFNLERSESFTDLSDPA---RDGPR 242
           A S D   NNN++ +    ++    +PQ+SR +STRF+    +S TD ++P    R+G R
Sbjct: 191 ALSDDGSNNNNNNNSGAPPAQVPTLRPQISRRHSTRFSPVIEDSVTDPTEPPPPMREGSR 250

Query: 243 RLSAALAMERSMSARETVVAQEAADAESTAHEEEQEEEQEEEQEQLEQQESSAAAPVRMS 278
           RL A LA ERS+SARE V AQEAA+  + A     +E     +        +   PVRMS
Sbjct: 251 RLYAVLAEERSLSAREAVAAQEAAEEAAAAAAAAADEAVSTAEAAATPVAETGPQPVRMS 310

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g11040 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG12g11040 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6R9_CUCSA	1.9e-88	70.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G342770 PE=4 SV=1	[more]
V4T971_9ROSI	9.3e-32	43.92	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020442mg PE=4 SV=1	[more]
W9SC41_9ROSA	5.1e-30	39.94	Uncharacterized protein OS=Morus notabilis GN=L484_003042 PE=4 SV=1	[more]
A0A067FRX5_CITSI	2.2e-28	43.06	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017330mg PE=4 SV=1	[more]
A0A0D2QUT8_GOSRA	2.4e-19	38.62	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G233400 PE=4 SV=1	[more]

BLAST of Cp4.1LG12g11040 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07120.1	1.9e-12	31.88	RING/U-box superfamily protein	[more]

BLAST of Cp4.1LG12g11040 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659116324\|ref\|XP_008458019.1\|	1.1e-94	74.02	PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis melo]	[more]
gi\|778726974\|ref\|XP_011659191.1\|	2.7e-88	70.46	PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Cucumis sativus]	[more]
gi\|567902210\|ref\|XP_006443593.1\|	1.3e-31	43.92	hypothetical protein CICLE_v10020442mg [Citrus clementina]	[more]
gi\|1009149507\|ref\|XP_015892515.1\|	5.6e-30	41.93	PREDICTED: uncharacterized protein LOC107426760 [Ziziphus jujuba]	[more]
gi\|703151216\|ref\|XP_010110062.1\|	7.4e-30	39.94	hypothetical protein L484_003042 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g11040.1	Cp4.1LG12g11040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 225..256 scor

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG12g11040	Cucumber (Gy14) v2	cgybcpeB900
Cp4.1LG12g11040	Melon (DHL92) v3.6.1	cpemedB146
Cp4.1LG12g11040	Silver-seed gourd	carcpeB0116
Cp4.1LG12g11040	Silver-seed gourd	carcpeB0597
Cp4.1LG12g11040	Cucumber (Chinese Long) v3	cpecucB0182
Cp4.1LG12g11040	Wax gourd	cpewgoB0209
Cp4.1LG12g11040	Cucurbita pepo (Zucchini)	cpecpeB160
Cp4.1LG12g11040	Cucumber (Gy14) v1	cgycpeB0132
Cp4.1LG12g11040	Cucurbita maxima (Rimu)	cmacpeB371
Cp4.1LG12g11040	Cucurbita maxima (Rimu)	cmacpeB896
Cp4.1LG12g11040	Cucurbita moschata (Rifu)	cmocpeB335
Cp4.1LG12g11040	Cucurbita moschata (Rifu)	cmocpeB834
Cp4.1LG12g11040	Wild cucumber (PI 183967)	cpecpiB159
Cp4.1LG12g11040	Cucumber (Chinese Long) v2	cpecuB157
Cp4.1LG12g11040	Bottle gourd (USVL1VR-Ls)	cpelsiB111
Cp4.1LG12g11040	Watermelon (Charleston Gray)	cpewcgB129
Cp4.1LG12g11040	Watermelon (97103) v1	cpewmB135
Cp4.1LG12g11040	Melon (DHL92) v3.5.1	cpemeB119