Cp4.1LG12g10850 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g10850
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG12 : 9183581 .. 9188109 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTGTCCCATTATATATTAATTAATATTTGATAAATATATCACATTATATATTAATTAAATATTTAATTCACGTTCAAACAACTTTTAATTCATTTACACGTGCGAAAACAAATATTTAATTCCCATTCTAAAAAAGAAGAAACAAAATAAAGTCAAAAAATGTCTAAATCTAAATATAAAAATAAAATTTTAACTATTTAAAAGTAATTGCATCACTTTTTCAAAGTTTAATGGTAAGACTTTCTTTTTTAGAAAATAAAAATAAAATAGAGTAAAAGAGTCCATTTATTGAGTATTGAAAATAATAAGCGTCGGTGTTCAAATATTTGACTATTTTGGAAATTAAAATAATTTTTTTTTTAATATTTGAGATTTAAATAAATATTTTTGAAGGTCTAAAAACAGATCAAATTTTGAAAAAAATAATTAATTTTTTAATTATTAAGACTATATTTATTTCCATAAAAAGAGCAAAAAACAGGTTAGATTTATGTAATTAAATATTCGAAAACTTTTAATTAAAATAGAAAAGTTAAAATTATATTTTTTTTTATTAAATTTGTTAAAATAAAAATATTACTTTTCGTACCTAAAATTTAGAGACGGAACATTTGAGATCACACGTTGGTTGTAAACGGAAACGTTTCTTATTCCTTACAAATATGTGAAAATCCTCTCCTTCGGATACCTTTCAAAATCGCGAGCGTGAATGACTCTATGTAACGAGTTAAAATAGACTCCGAAAATAATGGGCTTAAATGGTCAGAATTAATTTTAAATTTTATATTAAAATAAATAGTATTTAATTTATTTTTGAGATTTCAATTGAGAATATACTAATTTGTCATTTCCTTTTTAATTGGGTAAATTATGTGAATTAAATCTGATTCAATAATAATGTAAAATATTATTTTTTTTTTCAAAATAAATTATTATTATTATTAAATAGGAGAGTTGTGTTATTATAGATATTGTTTTTTATAACAAAAATTAGAATAATTCTCCAAAACAAATGGAAATAAACGATTAAAACGAAAATATTATTATATTTTTCTATTTTGTTGTAACGAAAATAAATATAAAAAAAAAAAAACCCAAAAATNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTAAATTAAAATTAGACACTAAAAATCCCCCAAACAAACACAAACCAACCCACAACCAGCCCCAAATTTCCGCTTCTAATTCCGGCGGCGACCCCACTCTTTTCAGGGCTGGGCGCGGTGGTGGAAGTGGTGGTTTCGTTGACACCGACAATCGCTGGCGAAGGTGCAGGAGACGCGCCGTCGTGAGCATATGGGGCAGGACTAGCACTAGACTTCTTATCAAACTCCAACACGCCCGTGGCCTTCAAATTAGCCTGTTCGAACTCATGAACTACAGGAACACCAGAATCCGGGTCAACCGCCGGTCCAACTTGCCAGACCTGGTTCAGCGACTTGGTTTTAGGCGGAACTTTGACGGTGGCGAAGATAGTGAACCGACCATCGGAATATTCCGCGGCGAGGCCCCAGACGAGGAAGGAGAGTTTCGGTGAGGGGACAACAGAGGAGTAGGAGGAGATGTTGAAGGTACGGACGGTGGGGGATTTGCCGGAAACAGAGGCGACTAGGGCCTGGGCTCCGGCCATGCCGGTGGAGGTGGGGTTGACGGCCCAGGCAACCCAGCCGGAGGAATGCGGCGGAGAGGCGAGAAAAGCAAGGGAGAGAGAGGAATTTTTGGGGTCGTAGGTCCAGTGGAGAAAGGCGTCGAGATGGGGGAGATCGTCGCAGTGGGCGAAGGATCTGTTGGAGAAGGATTGGGAAGAGCAAGTGAGGGATTGGGCGCGTGAAATTAGGGTTCCGGCGAGGGCTAAGAAGAGGATGAAATGGGCGGAGGACGCCATTGGAGGGGAAATGGGAGAGAAATGGGAGAGAAATTGGGAGTGGGAGAGAAGTGGAAATGGGGAGAGAATATATAAAGGTGAATAGGGAGTGGGGCGTTAGGAGGTTGGGGAAGATCAACTTTTGTGCCACTAATTTTGGGAATTGCGAGTGGGAACTTACTTACCATAAAAACTTCTTTTCTTTTCTTTTTCTTTTATGTTGCGCTTACAATGTTTGACTTTGACTTTCATTTGTGTGTTCTAAGTAAAGTGGTCAACCTCGATGCAATACCAAGATACTCGAGATACTTGAGAATAGATAGACTACTTACTACCATCGTATTTGGATTATCGACGTCCTTACTGATGGAGGCACTGTAATGTCTCATATTGGTTAGGGAAGAGAACAAACAACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCTTTGAGGGCAAGCCCGAAAGGGAAAGTCCAAAGAGAACAATATCTGCTAGCGGTGGATCTAGGTCGTTACACATACCCTTTTGCTTGTTTGCGAATTTGTATAGGTTTATATACACCACTTGAGCTTGACGACTAATTGACAATGTCTTCGGTAGTTTTTCTTGGGTGATAACTAGCCATATGACCCTGTAAACACTGTTGACAGAGATGTTGAATATGTCCTTTATTTTTAAATGGTATGTTTGCCTGCCTGCTACGGGCGTCAAGGTGGCTTGGGGTTTGATGCAATTTTGTCAGAGAGTTCTTTTTGTGTTACTGAAGTTGTGAATACTGTTAGCCTCTGGAGTCTCCTAACTAGGTCGTTTGTCATCATTTGTAGTTGTTCTATGGGCAACAATATAATTAGTAGACATCAGCGTTGTAATGAAACCTCGGACCACATGATGAATCTCTTTGTGTTCTTAGACTTTGTATTGACCAATTTAGAGTTAATCCCATCGATCTCGTGAATTCCACCAACATAGTGGCAAATTTGGAGCAAGCTAATGAATTTCTAATGTTTCTTTAATTTGGCTTTGCTTAGTTAATATTCTTCCTAGAGTTCTTATTTGAACGATTGTCATGTGATTACAGTTCCACCAAGACGAAGAACTTCCTACACATGTGTGCATCATTATGCAACATGAATGACGCACATAATACTCTTTGGTCATCCACGCATTTCATCTAACGAAATATCATCTCCACAGACAACAGTCATAATCGTGCCACAGTCAAATCTTTAGAGACCCCATTCAAGACACGAGGGTCATATGTCTTGAAGTCATGTAAGTATTTTGCGTCTGGCAACCATAGTAAGGTTTGAACTTATTGGTGACAGCATTGTAAGTGCCATGGTGGTACCTAGGTGGTGTCACGTCTAAGCCTATCCTACTCACTAAAGCTTGGCAAGTCAAACTCCTTATACCCCTATCTCGTCCTTCAGCAGGTAGTCATTAATATGAAATTTTCATTTATTCATAATATGTATTGCACGGATTGAAAAATCATAATCATAACATATAAACACCATTTATTATCTTTCACATCACATAATAAAAATTCCTTACAAAGTTTATTGCTACGAAAGTTACGTTTATAAGAAACTAAAATGTCACCGCTCTATTAATAATTCATTCTAAACATTATTGGATTTTACGATAAGTTCGAAAACATTACTTTAATAATTAAAAATAATAATATTTTTTTCCAGCCAATGGTACGGATCTAAGAATAATAATAATAATATTAAAATAATCCAAAGTTCATAATGTAATCAAATTAAATCATTTATTTATATATTCGTAGGAATAAAATAATAATAATAATAATAATAATAATAAAAAACCCAAAAATCTGAATCACAGAGTCACAGAGTTTGTATTATTATTATTATTATTTTCTAAAATTAAAATCAGAAACTAATAATTCCCCAAACAAACACAAACCAACCCACAACCAGCCGGAAATTCCGGCTTCTACTTCCGGCGACCCCACTCTTATCGGTACTGGGCGCGGTGGCGGAAGCGGCAGCTTCGTTAAGGCCGACAACCGCTGGCGACGGTGCAGGAGACTCACCGTCGAGAGCATGTGGGGCAGGACTAGCACCACCCTTCTTATCAAAAACCAACACGCTCTTGGCATTCAAATTAGCCGGTTTAAACTCATGAACAGAAGGAACACCAGTATCCGGGTCGACCTCCGGTCCAACTTGCCAGACATGGTTCAGCGACTTAGCCTCGGGCGGAACTTTAACGGAAGCGAAGATAGTGAACCGACCATCGGAAAATTCGGCGGCGAGGCCCCAGACGAGGAAGGAGAGTTTCGGTGAGGGGACAACAGAGGAGTAGGAGGAGATGTTGAAGGTACGGACAGAGGGGGCTTTCCCGGAAACAGAGGCGACAAAGGCCTGGGCTCCGGCCATACCGGTGGAAGTGGGGTTGACGGCCCAGGAGACCCAGCCGCCGGAATGCGGCGGAGAGGCGAGAAAAGCAAGGGAGAGAGAGGAATTTTTGGGATCGTAGGTCCAGTGGAGAAAGGCGTCGAGATGGGGGAGATCGTCGCAGTGGGCGAAGGATCTGTTGGAGAAGGATTGAGAAGAGCAAGTGAGGGATTGGGCGCGTGA

mRNA sequence

ATGCACACTAAAAATCCCCCAAACAAACACAAACCAACCCACAACCAGCCCCAAATTTCCGCTTCTAATTCCGGCGGCGACCCCACTCTTTTCAGGGCTGGGCGCGGTGGTGGAAGTGGTGGTTTCGTTGACACCGACAATCGCTGGCGAAGGTGCAGGAGACGCGCCGTCGTGAGCATATGGGGCAGGACTAGCACTAGACTTCTTATCAAACTCCAACACGCCCGTGGCCTTCAAATTAGCCTGTTCGAACTCATGAACTACAGGAACACCAGAATCCGGGTCAACCGCCGGTCCAACTTGCCAGACCTGGTTCAGCGACTTGGTTTTAGGCGGAACTTTGACGGTGGCGAAGATAGTGAACCGACCATCGGAATATTCCGCGGCGAGGCCCCAGACGAGGAAGGAGAGTTTCGAGGAGTAGGAGGAGATGTACGGACGGTGGGGGATTTGCCGGAAACAGAGGCGACTAGGGCCTGGGCTCCGGCCATGCCGGTGGAGGTGGGGTTGACGGCCCAGGCAACCCAGCCGGAGGAATGCGGCGGAGAGGCGAGAAAAGCAAGGGAGAGAGAGGAATTTTTGGGGTCAAAGGCGTCGAGATGGGGGAGATCGTCGCAGTGGGCGAAGGATCTGTTGGAGAAGGATTGGGAAGAGCAAGTGAGGGATTGGGCGCGTGAAATTAGGGTTCCGGCGAGGGCTAAGAAGAGGATGAAATGGGCGGAGGACGCCATTGGAGGGGAAATGGGAGAGAAATGGGAGAGAAATTGGGAGTGGGAGAGAAGTGGAAATGGGGAGAGAATATATAAAGAAACTAATAATTCCCCAAACAAACACAAACCAACCCACAACCAGCCGGAAATTCCGGCTTCTACTTCCGGCGACCCCACTCTTATCGGTACTGGGCGCGGTGGCGGAAGCGGCAGCTTCGTTAAGGCCGACAACCGCTGGCGACGGTGCAGGAGACTCACCGTCGAGAGCATGTGGGGCAGGACTAGCACCACCCTTCTTATCAAAAACCAACACGCTCTTGGCATTCAAATTAGCCGGTTTAAACTCATGAACAGAAGGAACACCAGTATCCGGGTCGACCTCCGGTCCAACTTGCCAGACATGGTTCAGCGACTTAGCCTCGGGCGGAACTTTAACGGAAGCGAAGATAGTGAACCGACCATCGGAAAATTCGGCGGCGAGGCCCCAGACGAGGAAGGAGAGTTTCGAGGAGTAGGAGGAGATGTTGAAGGTACGGACAGAGGGGGCTTTCCCGGAAACAGAGGCGACAAAGGCCTGGGCTCCGGCCATACCGGTGGAAGTGGGGTTGACGGCCCAGGAGACCCAGCCGCCGGAATGCGGCGGAGAGGCGAGAAAAGCAAGGGAGAGAGAGGAATTTTTGGGATCGTAGGTCCAGTGGAGAAAGGCGTCGAGATGGGGGAGATCGTCGCAGTGGGCGAAGGATCTGTTGGAGAAGGATTGAGAAGAGCAAGTGAGGGATTGGGCGCGTGA

Coding sequence (CDS)

ATGCACACTAAAAATCCCCCAAACAAACACAAACCAACCCACAACCAGCCCCAAATTTCCGCTTCTAATTCCGGCGGCGACCCCACTCTTTTCAGGGCTGGGCGCGGTGGTGGAAGTGGTGGTTTCGTTGACACCGACAATCGCTGGCGAAGGTGCAGGAGACGCGCCGTCGTGAGCATATGGGGCAGGACTAGCACTAGACTTCTTATCAAACTCCAACACGCCCGTGGCCTTCAAATTAGCCTGTTCGAACTCATGAACTACAGGAACACCAGAATCCGGGTCAACCGCCGGTCCAACTTGCCAGACCTGGTTCAGCGACTTGGTTTTAGGCGGAACTTTGACGGTGGCGAAGATAGTGAACCGACCATCGGAATATTCCGCGGCGAGGCCCCAGACGAGGAAGGAGAGTTTCGAGGAGTAGGAGGAGATGTACGGACGGTGGGGGATTTGCCGGAAACAGAGGCGACTAGGGCCTGGGCTCCGGCCATGCCGGTGGAGGTGGGGTTGACGGCCCAGGCAACCCAGCCGGAGGAATGCGGCGGAGAGGCGAGAAAAGCAAGGGAGAGAGAGGAATTTTTGGGGTCAAAGGCGTCGAGATGGGGGAGATCGTCGCAGTGGGCGAAGGATCTGTTGGAGAAGGATTGGGAAGAGCAAGTGAGGGATTGGGCGCGTGAAATTAGGGTTCCGGCGAGGGCTAAGAAGAGGATGAAATGGGCGGAGGACGCCATTGGAGGGGAAATGGGAGAGAAATGGGAGAGAAATTGGGAGTGGGAGAGAAGTGGAAATGGGGAGAGAATATATAAAGAAACTAATAATTCCCCAAACAAACACAAACCAACCCACAACCAGCCGGAAATTCCGGCTTCTACTTCCGGCGACCCCACTCTTATCGGTACTGGGCGCGGTGGCGGAAGCGGCAGCTTCGTTAAGGCCGACAACCGCTGGCGACGGTGCAGGAGACTCACCGTCGAGAGCATGTGGGGCAGGACTAGCACCACCCTTCTTATCAAAAACCAACACGCTCTTGGCATTCAAATTAGCCGGTTTAAACTCATGAACAGAAGGAACACCAGTATCCGGGTCGACCTCCGGTCCAACTTGCCAGACATGGTTCAGCGACTTAGCCTCGGGCGGAACTTTAACGGAAGCGAAGATAGTGAACCGACCATCGGAAAATTCGGCGGCGAGGCCCCAGACGAGGAAGGAGAGTTTCGAGGAGTAGGAGGAGATGTTGAAGGTACGGACAGAGGGGGCTTTCCCGGAAACAGAGGCGACAAAGGCCTGGGCTCCGGCCATACCGGTGGAAGTGGGGTTGACGGCCCAGGAGACCCAGCCGCCGGAATGCGGCGGAGAGGCGAGAAAAGCAAGGGAGAGAGAGGAATTTTTGGGATCGTAGGTCCAGTGGAGAAAGGCGTCGAGATGGGGGAGATCGTCGCAGTGGGCGAAGGATCTGTTGGAGAAGGATTGAGAAGAGCAAGTGAGGGATTGGGCGCGTGA

Protein sequence

MHTKNPPNKHKPTHNQPQISASNSGGDPTLFRAGRGGGSGGFVDTDNRWRRCRRRAVVSIWGRTSTRLLIKLQHARGLQISLFELMNYRNTRIRVNRRSNLPDLVQRLGFRRNFDGGEDSEPTIGIFRGEAPDEEGEFRGVGGDVRTVGDLPETEATRAWAPAMPVEVGLTAQATQPEECGGEARKAREREEFLGSKASRWGRSSQWAKDLLEKDWEEQVRDWAREIRVPARAKKRMKWAEDAIGGEMGEKWERNWEWERSGNGERIYKETNNSPNKHKPTHNQPEIPASTSGDPTLIGTGRGGGSGSFVKADNRWRRCRRLTVESMWGRTSTTLLIKNQHALGIQISRFKLMNRRNTSIRVDLRSNLPDMVQRLSLGRNFNGSEDSEPTIGKFGGEAPDEEGEFRGVGGDVEGTDRGGFPGNRGDKGLGSGHTGGSGVDGPGDPAAGMRRRGEKSKGERGIFGIVGPVEKGVEMGEIVAVGEGSVGEGLRRASEGLGA
Homology
[Close]
BLAST of Cp4.1LG12g10850 vs. TrEMBL
Match: A0A0A0K6W3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G368160 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 3.4e-29
Identity = 80/147 (54.42%), Postives = 102/147 (69.39%), Query Frame = 1 

Query: 357 NTSIRVDLRSNLPDMVQRLSLGRNFNGSEDSEPTIGKFGGEAPDEEGEFRG-----VGGD 416
           NT   +  R NLP++VQR  L R+F+G+ED +  +G+ G + P+ +GE  G     +  +
Sbjct: 5   NTHTGIHRRPNLPNLVQRRRLLRHFHGNEDRKQIVGRLGCKVPEGKGERGGRTNGVIRSN 64

Query: 417 VEGTDRGGFPGNRGDKGLGSGHTGGSGVDGPGDPAAGMRRRGEKSKGERGIFGIVGPVEK 476
           VE TD  GF    G++GLGS H GG GVDGPGDP  G   RGE+  GERGIFGIV PVE+
Sbjct: 65  VESTDSEGFGEESGEEGLGSSHAGGGGVDGPGDPTGGCGGRGEEGDGERGIFGIVRPVEE 124

Query: 477 GVEMGEIVAVGEGSVGEGLRRASEGLG 499
           GVE+GEI+A+GEGSV EGL RASEG+G
Sbjct: 125 GVEIGEILAIGEGSVWEGLGRASEGMG 151

[Close]
BLAST of Cp4.1LG12g10850 vs. NCBI nr
Match: gi|700189431|gb|KGN44664.1| (hypothetical protein Csa_7G368160 [Cucumis sativus])

HSP 1 Score: 137.9 bits (346), Expect = 4.9e-29
Identity = 80/147 (54.42%), Postives = 102/147 (69.39%), Query Frame = 1 

Query: 357 NTSIRVDLRSNLPDMVQRLSLGRNFNGSEDSEPTIGKFGGEAPDEEGEFRG-----VGGD 416
           NT   +  R NLP++VQR  L R+F+G+ED +  +G+ G + P+ +GE  G     +  +
Sbjct: 5   NTHTGIHRRPNLPNLVQRRRLLRHFHGNEDRKQIVGRLGCKVPEGKGERGGRTNGVIRSN 64

Query: 417 VEGTDRGGFPGNRGDKGLGSGHTGGSGVDGPGDPAAGMRRRGEKSKGERGIFGIVGPVEK 476
           VE TD  GF    G++GLGS H GG GVDGPGDP  G   RGE+  GERGIFGIV PVE+
Sbjct: 65  VESTDSEGFGEESGEEGLGSSHAGGGGVDGPGDPTGGCGGRGEEGDGERGIFGIVRPVEE 124

Query: 477 GVEMGEIVAVGEGSVGEGLRRASEGLG 499
           GVE+GEI+A+GEGSV EGL RASEG+G
Sbjct: 125 GVEIGEILAIGEGSVWEGLGRASEGMG 151

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g10850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG12g10850 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6W3_CUCSA3.4e-2954.42Uncharacterized protein OS=Cucumis sativus GN=Csa_7G368160 PE=4 SV=1[more]
BLAST of Cp4.1LG12g10850 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG12g10850 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189431|gb|KGN44664.1|4.9e-2954.42hypothetical protein Csa_7G368160 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g10850.1Cp4.1LG12g10850.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g10850Lsi02G021430Bottle gourd (USVL1VR-Ls)cpelsiB111
Cp4.1LG12g10850Bhi09G001041Wax gourdcpewgoB0209
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g10850Cp4.1LG17g11420Cucurbita pepo (Zucchini)cpecpeB160
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g10850Silver-seed gourdcarcpeB0018
Cp4.1LG12g10850Silver-seed gourdcarcpeB0116
Cp4.1LG12g10850Cucumber (Chinese Long) v3cpecucB0182
Cp4.1LG12g10850Cucurbita pepo (Zucchini)cpecpeB153
Cp4.1LG12g10850Cucumber (Gy14) v1cgycpeB1027
Cp4.1LG12g10850Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g10850Cucurbita maxima (Rimu)cmacpeB896
Cp4.1LG12g10850Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g10850Cucurbita moschata (Rifu)cmocpeB834
Cp4.1LG12g10850Wild cucumber (PI 183967)cpecpiB159
Cp4.1LG12g10850Cucumber (Chinese Long) v2cpecuB157
Cp4.1LG12g10850Watermelon (Charleston Gray)cpewcgB129
Cp4.1LG12g10850Watermelon (97103) v1cpewmB135
Cp4.1LG12g10850Melon (DHL92) v3.5.1cpemeB119
Cp4.1LG12g10850Cucumber (Gy14) v2cgybcpeB900
Cp4.1LG12g10850Melon (DHL92) v3.6.1cpemedB146