Cp4.1LG12g10850 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG12g10850
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG12 : 9183581 .. 9188109 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTGTCCCATTATATATTAATTAATATTTGATAAATATATCACATTATATATTAATTAAATATTTAATTCACGTTCAAACAACTTTTAATTCATTTACACGTGCGAAAACAAATATTTAATTCCCATTCTAAAAAAGAAGAAACAAAATAAAGTCAAAAAATGTCTAAATCTAAATATAAAAATAAAATTTTAACTATTTAAAAGTAATTGCATCACTTTTTCAAAGTTTAATGGTAAGACTTTCTTTTTTAGAAAATAAAAATAAAATAGAGTAAAAGAGTCCATTTATTGAGTATTGAAAATAATAAGCGTCGGTGTTCAAATATTTGACTATTTTGGAAATTAAAATAATTTTTTTTTTAATATTTGAGATTTAAATAAATATTTTTGAAGGTCTAAAAACAGATCAAATTTTGAAAAAAATAATTAATTTTTTAATTATTAAGACTATATTTATTTCCATAAAAAGAGCAAAAAACAGGTTAGATTTATGTAATTAAATATTCGAAAACTTTTAATTAAAATAGAAAAGTTAAAATTATATTTTTTTTTATTAAATTTGTTAAAATAAAAATATTACTTTTCGTACCTAAAATTTAGAGACGGAACATTTGAGATCACACGTTGGTTGTAAACGGAAACGTTTCTTATTCCTTACAAATATGTGAAAATCCTCTCCTTCGGATACCTTTCAAAATCGCGAGCGTGAATGACTCTATGTAACGAGTTAAAATAGACTCCGAAAATAATGGGCTTAAATGGTCAGAATTAATTTTAAATTTTATATTAAAATAAATAGTATTTAATTTATTTTTGAGATTTCAATTGAGAATATACTAATTTGTCATTTCCTTTTTAATTGGGTAAATTATGTGAATTAAATCTGATTCAATAATAATGTAAAATATTATTTTTTTTTTCAAAATAAATTATTATTATTATTAAATAGGAGAGTTGTGTTATTATAGATATTGTTTTTTATAACAAAAATTAGAATAATTCTCCAAAACAAATGGAAATAAACGATTAAAACGAAAATATTATTATATTTTTCTATTTTGTTGTAACGAAAATAAATATAAAAAAAAAAAAACCCAAAAATNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTAAATTAAAATTAGACACTAAAAATCCCCCAAACAAACACAAACCAACCCACAACCAGCCCCAAATTTCCGCTTCTAATTCCGGCGGCGACCCCACTCTTTTCAGGGCTGGGCGCGGTGGTGGAAGTGGTGGTTTCGTTGACACCGACAATCGCTGGCGAAGGTGCAGGAGACGCGCCGTCGTGAGCATATGGGGCAGGACTAGCACTAGACTTCTTATCAAACTCCAACACGCCCGTGGCCTTCAAATTAGCCTGTTCGAACTCATGAACTACAGGAACACCAGAATCCGGGTCAACCGCCGGTCCAACTTGCCAGACCTGGTTCAGCGACTTGGTTTTAGGCGGAACTTTGACGGTGGCGAAGATAGTGAACCGACCATCGGAATATTCCGCGGCGAGGCCCCAGACGAGGAAGGAGAGTTTCGGTGAGGGGACAACAGAGGAGTAGGAGGAGATGTTGAAGGTACGGACGGTGGGGGATTTGCCGGAAACAGAGGCGACTAGGGCCTGGGCTCCGGCCATGCCGGTGGAGGTGGGGTTGACGGCCCAGGCAACCCAGCCGGAGGAATGCGGCGGAGAGGCGAGAAAAGCAAGGGAGAGAGAGGAATTTTTGGGGTCGTAGGTCCAGTGGAGAAAGGCGTCGAGATGGGGGAGATCGTCGCAGTGGGCGAAGGATCTGTTGGAGAAGGATTGGGAAGAGCAAGTGAGGGATTGGGCGCGTGAAATTAGGGTTCCGGCGAGGGCTAAGAAGAGGATGAAATGGGCGGAGGACGCCATTGGAGGGGAAATGGGAGAGAAATGGGAGAGAAATTGGGAGTGGGAGAGAAGTGGAAATGGGGAGAGAATATATAAAGGTGAATAGGGAGTGGGGCGTTAGGAGGTTGGGGAAGATCAACTTTTGTGCCACTAATTTTGGGAATTGCGAGTGGGAACTTACTTACCATAAAAACTTCTTTTCTTTTCTTTTTCTTTTATGTTGCGCTTACAATGTTTGACTTTGACTTTCATTTGTGTGTTCTAAGTAAAGTGGTCAACCTCGATGCAATACCAAGATACTCGAGATACTTGAGAATAGATAGACTACTTACTACCATCGTATTTGGATTATCGACGTCCTTACTGATGGAGGCACTGTAATGTCTCATATTGGTTAGGGAAGAGAACAAACAACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCTTTGAGGGCAAGCCCGAAAGGGAAAGTCCAAAGAGAACAATATCTGCTAGCGGTGGATCTAGGTCGTTACACATACCCTTTTGCTTGTTTGCGAATTTGTATAGGTTTATATACACCACTTGAGCTTGACGACTAATTGACAATGTCTTCGGTAGTTTTTCTTGGGTGATAACTAGCCATATGACCCTGTAAACACTGTTGACAGAGATGTTGAATATGTCCTTTATTTTTAAATGGTATGTTTGCCTGCCTGCTACGGGCGTCAAGGTGGCTTGGGGTTTGATGCAATTTTGTCAGAGAGTTCTTTTTGTGTTACTGAAGTTGTGAATACTGTTAGCCTCTGGAGTCTCCTAACTAGGTCGTTTGTCATCATTTGTAGTTGTTCTATGGGCAACAATATAATTAGTAGACATCAGCGTTGTAATGAAACCTCGGACCACATGATGAATCTCTTTGTGTTCTTAGACTTTGTATTGACCAATTTAGAGTTAATCCCATCGATCTCGTGAATTCCACCAACATAGTGGCAAATTTGGAGCAAGCTAATGAATTTCTAATGTTTCTTTAATTTGGCTTTGCTTAGTTAATATTCTTCCTAGAGTTCTTATTTGAACGATTGTCATGTGATTACAGTTCCACCAAGACGAAGAACTTCCTACACATGTGTGCATCATTATGCAACATGAATGACGCACATAATACTCTTTGGTCATCCACGCATTTCATCTAACGAAATATCATCTCCACAGACAACAGTCATAATCGTGCCACAGTCAAATCTTTAGAGACCCCATTCAAGACACGAGGGTCATATGTCTTGAAGTCATGTAAGTATTTTGCGTCTGGCAACCATAGTAAGGTTTGAACTTATTGGTGACAGCATTGTAAGTGCCATGGTGGTACCTAGGTGGTGTCACGTCTAAGCCTATCCTACTCACTAAAGCTTGGCAAGTCAAACTCCTTATACCCCTATCTCGTCCTTCAGCAGGTAGTCATTAATATGAAATTTTCATTTATTCATAATATGTATTGCACGGATTGAAAAATCATAATCATAACATATAAACACCATTTATTATCTTTCACATCACATAATAAAAATTCCTTACAAAGTTTATTGCTACGAAAGTTACGTTTATAAGAAACTAAAATGTCACCGCTCTATTAATAATTCATTCTAAACATTATTGGATTTTACGATAAGTTCGAAAACATTACTTTAATAATTAAAAATAATAATATTTTTTTCCAGCCAATGGTACGGATCTAAGAATAATAATAATAATATTAAAATAATCCAAAGTTCATAATGTAATCAAATTAAATCATTTATTTATATATTCGTAGGAATAAAATAATAATAATAATAATAATAATAATAAAAAACCCAAAAATCTGAATCACAGAGTCACAGAGTTTGTATTATTATTATTATTATTTTCTAAAATTAAAATCAGAAACTAATAATTCCCCAAACAAACACAAACCAACCCACAACCAGCCGGAAATTCCGGCTTCTACTTCCGGCGACCCCACTCTTATCGGTACTGGGCGCGGTGGCGGAAGCGGCAGCTTCGTTAAGGCCGACAACCGCTGGCGACGGTGCAGGAGACTCACCGTCGAGAGCATGTGGGGCAGGACTAGCACCACCCTTCTTATCAAAAACCAACACGCTCTTGGCATTCAAATTAGCCGGTTTAAACTCATGAACAGAAGGAACACCAGTATCCGGGTCGACCTCCGGTCCAACTTGCCAGACATGGTTCAGCGACTTAGCCTCGGGCGGAACTTTAACGGAAGCGAAGATAGTGAACCGACCATCGGAAAATTCGGCGGCGAGGCCCCAGACGAGGAAGGAGAGTTTCGGTGAGGGGACAACAGAGGAGTAGGAGGAGATGTTGAAGGTACGGACAGAGGGGGCTTTCCCGGAAACAGAGGCGACAAAGGCCTGGGCTCCGGCCATACCGGTGGAAGTGGGGTTGACGGCCCAGGAGACCCAGCCGCCGGAATGCGGCGGAGAGGCGAGAAAAGCAAGGGAGAGAGAGGAATTTTTGGGATCGTAGGTCCAGTGGAGAAAGGCGTCGAGATGGGGGAGATCGTCGCAGTGGGCGAAGGATCTGTTGGAGAAGGATTGAGAAGAGCAAGTGAGGGATTGGGCGCGTGA

mRNA sequence

ATGCACACTAAAAATCCCCCAAACAAACACAAACCAACCCACAACCAGCCCCAAATTTCCGCTTCTAATTCCGGCGGCGACCCCACTCTTTTCAGGGCTGGGCGCGGTGGTGGAAGTGGTGGTTTCGTTGACACCGACAATCGCTGGCGAAGGTGCAGGAGACGCGCCGTCGTGAGCATATGGGGCAGGACTAGCACTAGACTTCTTATCAAACTCCAACACGCCCGTGGCCTTCAAATTAGCCTGTTCGAACTCATGAACTACAGGAACACCAGAATCCGGGTCAACCGCCGGTCCAACTTGCCAGACCTGGTTCAGCGACTTGGTTTTAGGCGGAACTTTGACGGTGGCGAAGATAGTGAACCGACCATCGGAATATTCCGCGGCGAGGCCCCAGACGAGGAAGGAGAGTTTCGAGGAGTAGGAGGAGATGTACGGACGGTGGGGGATTTGCCGGAAACAGAGGCGACTAGGGCCTGGGCTCCGGCCATGCCGGTGGAGGTGGGGTTGACGGCCCAGGCAACCCAGCCGGAGGAATGCGGCGGAGAGGCGAGAAAAGCAAGGGAGAGAGAGGAATTTTTGGGGTCAAAGGCGTCGAGATGGGGGAGATCGTCGCAGTGGGCGAAGGATCTGTTGGAGAAGGATTGGGAAGAGCAAGTGAGGGATTGGGCGCGTGAAATTAGGGTTCCGGCGAGGGCTAAGAAGAGGATGAAATGGGCGGAGGACGCCATTGGAGGGGAAATGGGAGAGAAATGGGAGAGAAATTGGGAGTGGGAGAGAAGTGGAAATGGGGAGAGAATATATAAAGAAACTAATAATTCCCCAAACAAACACAAACCAACCCACAACCAGCCGGAAATTCCGGCTTCTACTTCCGGCGACCCCACTCTTATCGGTACTGGGCGCGGTGGCGGAAGCGGCAGCTTCGTTAAGGCCGACAACCGCTGGCGACGGTGCAGGAGACTCACCGTCGAGAGCATGTGGGGCAGGACTAGCACCACCCTTCTTATCAAAAACCAACACGCTCTTGGCATTCAAATTAGCCGGTTTAAACTCATGAACAGAAGGAACACCAGTATCCGGGTCGACCTCCGGTCCAACTTGCCAGACATGGTTCAGCGACTTAGCCTCGGGCGGAACTTTAACGGAAGCGAAGATAGTGAACCGACCATCGGAAAATTCGGCGGCGAGGCCCCAGACGAGGAAGGAGAGTTTCGAGGAGTAGGAGGAGATGTTGAAGGTACGGACAGAGGGGGCTTTCCCGGAAACAGAGGCGACAAAGGCCTGGGCTCCGGCCATACCGGTGGAAGTGGGGTTGACGGCCCAGGAGACCCAGCCGCCGGAATGCGGCGGAGAGGCGAGAAAAGCAAGGGAGAGAGAGGAATTTTTGGGATCGTAGGTCCAGTGGAGAAAGGCGTCGAGATGGGGGAGATCGTCGCAGTGGGCGAAGGATCTGTTGGAGAAGGATTGAGAAGAGCAAGTGAGGGATTGGGCGCGTGA

Coding sequence (CDS)

ATGCACACTAAAAATCCCCCAAACAAACACAAACCAACCCACAACCAGCCCCAAATTTCCGCTTCTAATTCCGGCGGCGACCCCACTCTTTTCAGGGCTGGGCGCGGTGGTGGAAGTGGTGGTTTCGTTGACACCGACAATCGCTGGCGAAGGTGCAGGAGACGCGCCGTCGTGAGCATATGGGGCAGGACTAGCACTAGACTTCTTATCAAACTCCAACACGCCCGTGGCCTTCAAATTAGCCTGTTCGAACTCATGAACTACAGGAACACCAGAATCCGGGTCAACCGCCGGTCCAACTTGCCAGACCTGGTTCAGCGACTTGGTTTTAGGCGGAACTTTGACGGTGGCGAAGATAGTGAACCGACCATCGGAATATTCCGCGGCGAGGCCCCAGACGAGGAAGGAGAGTTTCGAGGAGTAGGAGGAGATGTACGGACGGTGGGGGATTTGCCGGAAACAGAGGCGACTAGGGCCTGGGCTCCGGCCATGCCGGTGGAGGTGGGGTTGACGGCCCAGGCAACCCAGCCGGAGGAATGCGGCGGAGAGGCGAGAAAAGCAAGGGAGAGAGAGGAATTTTTGGGGTCAAAGGCGTCGAGATGGGGGAGATCGTCGCAGTGGGCGAAGGATCTGTTGGAGAAGGATTGGGAAGAGCAAGTGAGGGATTGGGCGCGTGAAATTAGGGTTCCGGCGAGGGCTAAGAAGAGGATGAAATGGGCGGAGGACGCCATTGGAGGGGAAATGGGAGAGAAATGGGAGAGAAATTGGGAGTGGGAGAGAAGTGGAAATGGGGAGAGAATATATAAAGAAACTAATAATTCCCCAAACAAACACAAACCAACCCACAACCAGCCGGAAATTCCGGCTTCTACTTCCGGCGACCCCACTCTTATCGGTACTGGGCGCGGTGGCGGAAGCGGCAGCTTCGTTAAGGCCGACAACCGCTGGCGACGGTGCAGGAGACTCACCGTCGAGAGCATGTGGGGCAGGACTAGCACCACCCTTCTTATCAAAAACCAACACGCTCTTGGCATTCAAATTAGCCGGTTTAAACTCATGAACAGAAGGAACACCAGTATCCGGGTCGACCTCCGGTCCAACTTGCCAGACATGGTTCAGCGACTTAGCCTCGGGCGGAACTTTAACGGAAGCGAAGATAGTGAACCGACCATCGGAAAATTCGGCGGCGAGGCCCCAGACGAGGAAGGAGAGTTTCGAGGAGTAGGAGGAGATGTTGAAGGTACGGACAGAGGGGGCTTTCCCGGAAACAGAGGCGACAAAGGCCTGGGCTCCGGCCATACCGGTGGAAGTGGGGTTGACGGCCCAGGAGACCCAGCCGCCGGAATGCGGCGGAGAGGCGAGAAAAGCAAGGGAGAGAGAGGAATTTTTGGGATCGTAGGTCCAGTGGAGAAAGGCGTCGAGATGGGGGAGATCGTCGCAGTGGGCGAAGGATCTGTTGGAGAAGGATTGAGAAGAGCAAGTGAGGGATTGGGCGCGTGA

Protein sequence

MHTKNPPNKHKPTHNQPQISASNSGGDPTLFRAGRGGGSGGFVDTDNRWRRCRRRAVVSIWGRTSTRLLIKLQHARGLQISLFELMNYRNTRIRVNRRSNLPDLVQRLGFRRNFDGGEDSEPTIGIFRGEAPDEEGEFRGVGGDVRTVGDLPETEATRAWAPAMPVEVGLTAQATQPEECGGEARKAREREEFLGSKASRWGRSSQWAKDLLEKDWEEQVRDWAREIRVPARAKKRMKWAEDAIGGEMGEKWERNWEWERSGNGERIYKETNNSPNKHKPTHNQPEIPASTSGDPTLIGTGRGGGSGSFVKADNRWRRCRRLTVESMWGRTSTTLLIKNQHALGIQISRFKLMNRRNTSIRVDLRSNLPDMVQRLSLGRNFNGSEDSEPTIGKFGGEAPDEEGEFRGVGGDVEGTDRGGFPGNRGDKGLGSGHTGGSGVDGPGDPAAGMRRRGEKSKGERGIFGIVGPVEKGVEMGEIVAVGEGSVGEGLRRASEGLGA
BLAST of Cp4.1LG12g10850 vs. TrEMBL
Match: A0A0A0K6W3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G368160 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 3.4e-29
Identity = 80/147 (54.42%), Postives = 102/147 (69.39%), Query Frame = 1

Query: 357 NTSIRVDLRSNLPDMVQRLSLGRNFNGSEDSEPTIGKFGGEAPDEEGEFRG-----VGGD 416
           NT   +  R NLP++VQR  L R+F+G+ED +  +G+ G + P+ +GE  G     +  +
Sbjct: 5   NTHTGIHRRPNLPNLVQRRRLLRHFHGNEDRKQIVGRLGCKVPEGKGERGGRTNGVIRSN 64

Query: 417 VEGTDRGGFPGNRGDKGLGSGHTGGSGVDGPGDPAAGMRRRGEKSKGERGIFGIVGPVEK 476
           VE TD  GF    G++GLGS H GG GVDGPGDP  G   RGE+  GERGIFGIV PVE+
Sbjct: 65  VESTDSEGFGEESGEEGLGSSHAGGGGVDGPGDPTGGCGGRGEEGDGERGIFGIVRPVEE 124

Query: 477 GVEMGEIVAVGEGSVGEGLRRASEGLG 499
           GVE+GEI+A+GEGSV EGL RASEG+G
Sbjct: 125 GVEIGEILAIGEGSVWEGLGRASEGMG 151

BLAST of Cp4.1LG12g10850 vs. NCBI nr
Match: gi|700189431|gb|KGN44664.1| (hypothetical protein Csa_7G368160 [Cucumis sativus])

HSP 1 Score: 137.9 bits (346), Expect = 4.9e-29
Identity = 80/147 (54.42%), Postives = 102/147 (69.39%), Query Frame = 1

Query: 357 NTSIRVDLRSNLPDMVQRLSLGRNFNGSEDSEPTIGKFGGEAPDEEGEFRG-----VGGD 416
           NT   +  R NLP++VQR  L R+F+G+ED +  +G+ G + P+ +GE  G     +  +
Sbjct: 5   NTHTGIHRRPNLPNLVQRRRLLRHFHGNEDRKQIVGRLGCKVPEGKGERGGRTNGVIRSN 64

Query: 417 VEGTDRGGFPGNRGDKGLGSGHTGGSGVDGPGDPAAGMRRRGEKSKGERGIFGIVGPVEK 476
           VE TD  GF    G++GLGS H GG GVDGPGDP  G   RGE+  GERGIFGIV PVE+
Sbjct: 65  VESTDSEGFGEESGEEGLGSSHAGGGGVDGPGDPTGGCGGRGEEGDGERGIFGIVRPVEE 124

Query: 477 GVEMGEIVAVGEGSVGEGLRRASEGLG 499
           GVE+GEI+A+GEGSV EGL RASEG+G
Sbjct: 125 GVEIGEILAIGEGSVWEGLGRASEGMG 151

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K6W3_CUCSA3.4e-2954.42Uncharacterized protein OS=Cucumis sativus GN=Csa_7G368160 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|700189431|gb|KGN44664.1|4.9e-2954.42hypothetical protein Csa_7G368160 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g10850.1Cp4.1LG12g10850.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g10850Lsi02G021430Bottle gourd (USVL1VR-Ls)cpelsiB111
Cp4.1LG12g10850Bhi09G001041Wax gourdcpewgoB0209
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g10850Cp4.1LG17g11420Cucurbita pepo (Zucchini)cpecpeB160