Cp4.1LG12g10610 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCAGCACCCCGTCCAGAGCATCCGCCATCGCCATCCAACAGCCAAGCATCTGAACTCGACCTTTACTTACCAGTAGAATACTATAGGGAGTGCGGCACAGCATTAAAGAGACGGATGTGCGGAAGAGGCAGTTGTACTCTTGGAGCTGATGACATCCCAAGGGCCTACCACCGCACCGGCGGCCGCGTCCGCACCCTAATCATGGACCGGTAACGTCATTCGGTTCTTTCTTATTTCGTTTTGCTTGACTGTATTTGAATTTTCCCTATATTCCATGTCTAGTAGGTAGGTTCTGAACTTAACGGCTGTGATGTATTTTGCATTTTTTTTTGTTGTTGAATATTTAGTTTTCGTCCATTGTTCAATGTCTCCCCGGGCTCGGATTTGTCGATTGTTGGTCGAGATTATGAATCTGGTGGGGTCTGATTCCTAGTTTTACCGAGAAATCCGAGTAACCTAATTTCTTCAAGACGGTAATTTTCCCTCTTTTGTCTTGTGGTCTTTATCTGGTTTTCGTGTATAGTTTTATTGAAATGGCAGGTACTGTTTTTGTTACCTGTGGTCTGTAAGCATTTGTGTATGCAGGAGCTATTTCGTAGTTTTGTCTTGGTTTAAGTAATTCATGGCTTTTGCTTTTAGAAAATGGTAGTCAATCAATAGTTTTGTTTTTTGCACAATGCAGGGGAGGCTTTCTTGAATTTGTTATTATTGTTTTTGCCGGTGAATTATTTACACTCATACCATTCTTACAACTTCATCATCTCCAGCTTTAGAGTGGTTGCACGGTTAGTCTTATCTTTTCTTATTGGATTTGAATGTTGATGGGGACATGATGGAACTAAAAATTGTCAATCTCTGATGTGGTTGCAATAATTTTGATTTTATTATAGAAAAGATTAGTGTATTAATGTCATATTGTACAACGGTGAAATTAATCTGAGGGGAGGTTTATGGATTATAAGGAATTCCTACTAGCCTTGATAGAAAACAGAGGTTACAAGCTTGTCACATCTTATGAAGGGAAGAAGAATCTGGCAAGGAAATACTGGGAGCCGCCTACTTGAAGACACATAATGGCTTTCATATGGATCCAATGGACATGATCCTCTCTTGGATTTTACCCTTTGGAAAATATGATTAGTAACTTCATTTTTATGTCTTCTTGTGTAGATAAGCTAAAGAATGATAGAAAAATGAACGCTCAAATTCCCCGTAACACATCTGTGAAGCCCGAGCCATCGGAAAGTCCAGAAGAACACGAAAGAGATGTAAACATTAGAGCTTCATCTGAAGAATCAAAGGATTGTCTCGCGAAGTGTTCTTCTGTGACTGTATCTCAAATCAAATGGGACCGTGAAGATATCTCATCTGAGTCAAAAAGTGGCATGGATGACTGTCGTAAGATTGGCAGTAGTCCAAAGATAAGGAAGAAGGGAAGCTTGAAGACTGGTAATGACAACCAATCAACCCTCTTTCAATACTTGGGGAGAAAATAGACAGGCTTACCTTATCCAGACAGGTAAATTGATTACTTGTGCGCCATGACTCATGTTTATATATATGTTGTAGTTTGTTTATCTTGCTGTGTTTGTGTGAGGAATCACGAACCTCCACAATGGTAAGATATTGCCACTTTGAGCATAAGCTCTTATGGCTTTGTTTTTTGTTTTCCCAAAAATCCTCGTACCAATGGAGATAGTATTCCTTACTTATAATAAACCCATGATCAACCAATTAATTAGCCGACGTGGGACTCCTCTTCCAACAATCCTCCCCTCGAACAAAATACACCACAAAGCCTCTCCTGAGGCCTATGGAGCCCTCGAGCAGTCTTCCCTTAATCGAGGCTCGACTTCTTTCCTAGAGCTCTCGAACAAAATACACCCTTTATTCGACATTTGAGTCACTTTTGGTCGTGTTAAATGCAGTGTATTTATGTGGTATAAAAGCAGCTTCTGTTGCTTAGAAGGTAAAGTTCGATCATGTTGATCCTTCCGCTTTTCACTGAACTGTACTCTTTCTGATATGTTTTGTAACAAATCTCCTCTTACTGGTTTTTGCATACTTTTAGTTAGTGAAATTACCCTTTTAGTCTATTTGGTTTCACAGCTGATGGTATAGACAATTACCACTAATCAAATCAAATTATTTTACTTAACTCGGTAAATTCATGCTGAAAATCATTTTGATTTCACTACAGTTCACAGGACAAGAAATTGTACAGATTATACAACAACGTGAAGGGAGACAAGGAGACCACACCACCCAAATGAAATGCTTCATTCATTAAAGAATAAGCATATTCATCAGCTAAGAGGGAACAAAGTTGAACGTAGAAACGGCAAAAGCGAGAAATAAGCTTCTATCAACTTCTCATTTGGAGTTAGCTCTATAATCAACCTCTTCAACATCCGAAAAGGCCCGACCATGACTCGTGACCCAAGACAGAACCCTCGCCGTCGATTCCCAAGTCGTATAGTACTGCTTCTTCGTCGTCGCGACCGTCGTCGTGGACGACACCATCCTATTAACCCAGCTGAGTTCGAGCACATTGGTATGGCCATGGCTTCTCTCTTTAACATTCCCTAATAGCACTTGATCTAGCTCCAATAATGTGATTTTCTGAATTTGAATTTGAATATCTTCATAATGTGATGTATATATATAATATATAGATTGCAACAGGCTTGAAGTTAATAATGGTAGTCATAATGGCTGCAATGATAATAATCATTACATTGAGGCTTGATGCTTTGATTCATAAA TCAGCACCCCGTCCAGAGCATCCGCCATCGCCATCCAACAGCCAAGCATCTGAACTCGACCTTTACTTACCAGTAGAATACTATAGGGAGTGCGGCACAGCATTAAAGAGACGGATGTGCGGAAGAGGCAGTTGTACTCTTGGAGCTGATGACATCCCAAGGGCCTACCACCGCACCGGCGGCCGCGTCCGCACCCTAATCATGGACCGTTTTCGTCCATTGTTCAATGTCTCCCCGGGCTCGGATTTGTCGATTGTTGGTCGAGATTATGAATCTGGTGGGGTACTGTTTTTGTTACCTGTGGTCTATAAGCTAAAGAATGATAGAAAAATGAACGCTCAAATTCCCCGTAACACATCTGTGAAGCCCGAGCCATCGGAAAGTCCAGAAGAACACGAAAGAGATGTAAACATTAGAGCTTCATCTGAAGAATCAAAGGATTGTCTCGCGAAGTGTTCTTCTGTGACTGTATCTCAAATCAAATGGGACCGTGAAGATATCTCATCTGAGTCAAAAAGTGGCATGGATGACTGTCGTAAGATTGGCAGTAGTCCAAAGATAAGGAAGAAGGGAAGCTTGAAGACTGGTAATGACAACCAATCAACCCTCTTTCAATACTTGGGGAGAAAATAGACAGGCTTACCTTATCCAGACAGTTCACAGGACAAGAAATTGTACAGATTATACAACAACGTGAAGGGAGACAAGGAGACCACACCACCCAAATGAAATGCTTCATTCATTAAAGAATAAGCATATTCATCAGCTAAGAGGGAACAAAGTTGAACGTAGAAACGGCAAAAGCGAGAAATAAGCTTCTATCAACTTCTCATTTGGAGTTAGCTCTATAATCAACCTCTTCAACATCCGAAAAGGCCCGACCATGACTCGTGACCCAAGACAGAACCCTCGCCGTCGATTCCCAAGTCGTATAGTACTGCTTCTTCGTCGTCGCGACCGTCGTCGTGGACGACACCATCCTATTAACCCAGCTGAGTTCGAGCACATTGGTATGGCCATGGCTTCTCTCTTTAACATTCCCTAATAGCACTTGATCTAGCTCCAATAATGTGATTTTCTGAATTTGAATTTGAATATCTTCATAATGTGATGTATATATATAATATATAGATTGCAACAGGCTTGAAGTTAATAATGGTAGTCATAATGGCTGCAATGATAATAATCATTACATTGAGGCTTGATGCTTTGATTCATAAA TCAGCACCCCGTCCAGAGCATCCGCCATCGCCATCCAACAGCCAAGCATCTGAACTCGACCTTTACTTACCAGTAGAATACTATAGGGAGTGCGGCACAGCATTAAAGAGACGGATGTGCGGAAGAGGCAGTTGTACTCTTGGAGCTGATGACATCCCAAGGGCCTACCACCGCACCGGCGGCCGCGTCCGCACCCTAATCATGGACCGTTTTCGTCCATTGTTCAATGTCTCCCCGGGCTCGGATTTGTCGATTGTTGGTCGAGATTATGAATCTGGTGGGGTACTGTTTTTGTTACCTGTGGTCTATAAGCTAAAGAATGATAGAAAAATGAACGCTCAAATTCCCCGTAACACATCTGTGAAGCCCGAGCCATCGGAAAGTCCAGAAGAACACGAAAGAGATGTAAACATTAGAGCTTCATCTGAAGAATCAAAGGATTGTCTCGCGAAGTGTTCTTCTGTGACTGTATCTCAAATCAAATGGGACCGTGAAGATATCTCATCTGAGTCAAAAAGTGGCATGGATGACTGTCGTAAGATTGGCAGTAGTCCAAAGATAAGGAAGAAGGGAAGCTTGAAGACTGGTAATGACAACCAATCAACCCTCTTTCAATACTTGGGGAGAAAATAG SAPRPEHPPSPSNSQASELDLYLPVEYYRECGTALKRRMCGRGSCTLGADDIPRAYHRTGGRVRTLIMDRFRPLFNVSPGSDLSIVGRDYESGGVLFLLPVVYKLKNDRKMNAQIPRNTSVKPEPSESPEEHERDVNIRASSEESKDCLAKCSSVTVSQIKWDREDISSESKSGMDDCRKIGSSPKIRKKGSLKTGNDNQSTLFQYLGRK
BLAST of Cp4.1LG12g10610 vs. TrEMBL
Match: A0A0A0K6X8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G371760 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.1e-26 Identity = 72/95 (75.79%), Postives = 78/95 (82.11%), Query Frame = 1
BLAST of Cp4.1LG12g10610 vs. TrEMBL
Match: M5VHM0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018685mg PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.5e-12 Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 1
BLAST of Cp4.1LG12g10610 vs. TrEMBL
Match: W9S2R2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015844 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.0e-11 Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 1
BLAST of Cp4.1LG12g10610 vs. TrEMBL
Match: A0A067FCI2_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0159011mg PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 5.1e-11 Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 1
BLAST of Cp4.1LG12g10610 vs. TrEMBL
Match: A0A0B2PTR1_GLYSO (UPF0361 protein C3orf37 like OS=Glycine soja GN=glysoja_026667 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.1e-10 Identity = 45/108 (41.67%), Postives = 59/108 (54.63%), Query Frame = 1
BLAST of Cp4.1LG12g10610 vs. TAIR10
Match: AT2G26470.1 (AT2G26470.1 unknown protein) HSP 1 Score: 62.4 bits (150), Expect = 3.9e-10 Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 1
BLAST of Cp4.1LG12g10610 vs. NCBI nr
Match: gi|778727171|ref|XP_011659221.1| (PREDICTED: embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein isoform X2 [Cucumis sativus]) HSP 1 Score: 128.3 bits (321), Expect = 1.6e-26 Identity = 72/95 (75.79%), Postives = 78/95 (82.11%), Query Frame = 1
BLAST of Cp4.1LG12g10610 vs. NCBI nr
Match: gi|778727168|ref|XP_011659220.1| (PREDICTED: embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein isoform X1 [Cucumis sativus]) HSP 1 Score: 128.3 bits (321), Expect = 1.6e-26 Identity = 72/95 (75.79%), Postives = 78/95 (82.11%), Query Frame = 1
BLAST of Cp4.1LG12g10610 vs. NCBI nr
Match: gi|659116514|ref|XP_008458106.1| (PREDICTED: embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein isoform X2 [Cucumis melo]) HSP 1 Score: 87.8 bits (216), Expect = 2.4e-14 Identity = 44/60 (73.33%), Postives = 47/60 (78.33%), Query Frame = 1
BLAST of Cp4.1LG12g10610 vs. NCBI nr
Match: gi|659116512|ref|XP_008458105.1| (PREDICTED: embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein isoform X1 [Cucumis melo]) HSP 1 Score: 87.8 bits (216), Expect = 2.4e-14 Identity = 44/60 (73.33%), Postives = 47/60 (78.33%), Query Frame = 1
BLAST of Cp4.1LG12g10610 vs. NCBI nr
Match: gi|595790637|ref|XP_007199067.1| (hypothetical protein PRUPE_ppa018685mg [Prunus persica]) HSP 1 Score: 80.1 bits (196), Expect = 5.1e-12 Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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