Cp4.1LG12g10320 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g10320
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Leucine-rich repeat, ribonuclease inhibitor subtype
Location	Cp4.1LG12 : 9501700 .. 9510928 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCACGGATGGTTATCAGATATTTTTACAAAGTAACACAGAAAATAACATATAATTTTGATCTGTTCTTGGTGGCTGAATGCCGTGAAAACGCCGTCTCCGCCGCTATTTCTCCTCTTCCGCCGTACAATTCCGGTGTCCGTCTTCCTTCGGTAATAATTCCTAATCTTGTACTCGTCGCTGACCATTGTCCAGTTCCATTTCCAATTCTGTTCTTTTCCATTTCAGTTTTCATGGCTGAAGCTCCTTCGCTGCTCTTTCTATGCACAGCCCTAGTCAGAGACGAGATCGTTCGAAGTAATCATATCATCTCCATAGTTCTTGTGCTACTTATACTCTTTTCCTCCGCATTCCTTTTTCTACTGTGTTTTCTCAATCCGTTGTTCTTTTTGACTGTTAGGGGATGACGTTCCACCGGCTGTCTATGACCTTCCTCCCGACCTGTTGGATACCCTGGCTTCGCAGCTGCCACCGTTGGCTTTGCAGAATTTACAGTCTGGAATGTACGTCGTCCTACCCTAATTAACTTATCAAATCTTATCATTTAGGATGATTGAAGACTGTCATATCCACGTGGTTTTTTTTAGTGTGTATGAGTATCGCATAAAATTTTGAACTGGAAACCTTTATTTTATTGATTTTCTCTACGAGTTCAACAAATATGAGAGGGGAAGTTTGAACCTTCAACCTGGAGAAAGATATGCTTAACCAGTGAGAGCTATATATGTTGAACTTTCAGGTAGATGTTTCTGTGAAGCATCATTTAAAGCAAAGTATTGTTGTTAATGCGCAATTTTCTGCCACAATCAAACACGGATTTTATTTGACACTGAGGGTATATTTATGTAGCTTGGGTTGGGAATTTGTTTTGCCTATATTTGGATTGTGTGGAAGAAGAGAAAAAGTGAACCTTTATAACTTGTGTTTGGTTAGGGGTAAAAATAAGTGTGTAGCTTGAGTGAAAGGTGGATTTCCGAACCCTAAGTTCATGGGGTCTGTGAGATTAGTAAGTTGATAGCATGATTTAAACAAGCTTGTGCCTTAATATATAGCTCGAGCGAAAGGTGGTTTTTGAATCCTAAGTTCATATGGTGCGTGAGACTAATAACTCACCATGTGCGTTATCACCTATTCCACCCATTTATTTCTTCGTCTGATTATTCATAGAACCAGGGACAAAAATCAATTACCAAAATGCAAAATTAATTCTCAGTGACCATCAAAACTACAGAGAAACATTTGCTCAAGAGCTCCGCATAAGACTTGTAAGAAGAACAACCCAAGAAAGACCGATCATAGAAAAATCCAACAAAAAGACCATCAATGCCAAATGAGTGAAGATTCTTTTTCACTCCTATTCTGCAATAGAGGAGACTGAAAAATTGTGATTGAAGAATCGAAATGTGCAGTGACAAAATGATTTTGAAGAGATTATGAGGATTGGGATGATGGGAAGAAATGAGGATTTGGGAAATGAAATGGGGAAAAGGGGATTGAGAGAATACGAGGAAGAAGTTTCTGTCTTTAGATTTCTGTCTTGGATTAAAGGCGATTTGGTTTTCGTGAAGTCTTAGAAACTAACAAGAAGTTGGTACATACAGATGGGTGATTGAGTTTTTCTTGGTTTCTCGGATTTGGGTTTTCTTCTGAAGCCATGATAATTTGGGCGTATGTAGCTAGATTTAATCCCTTACTTTGGGCGTTCGTGTTGAAAGAATTTTGTAATTATCCCTTTTGTCTTATTCTCTTGAACTGGAACCCTTCCTAGGCGACAAGGTCTTGTGTGGCTTCTTTTGTAAGCCTTTCCTGATTGAACTTTCAATTAATATTTCCTTCCTATCCCACTGATTTGATGTTAGGAAGTTGAGTTACCCGAACTCCATCAAATTTCCCCCAATTTTGAACATGCCAACTATCTTCCAGCCTGATGTTTTATTTATTATTTATTATTATTATTATTATTTTGATAATGAACTATCTTCCAGTCTGATGAATTTGTAATTTTGAACATTTGGAACAATTTCAATGAGAATCTGAAAAATAACAATGATACATCACTTCAGTAACAGCCATTTTCAAGTGTGAGCTGTGGACTTAATTTTTATAATATTCCTTGAGCAGGCCATTTGAGCTCCAGAATGAAGATGAATATGATAATGATTGCCCTAAGGATGGGCGGAAGCGCAGAAGGTTTTTCAATTTCACCATATTCTAGTTTAGCATCTTGTTTTTCTTGGTTGAGGTGTAATGAGGGTAAAATATTCGGGAAGGAAGAGAAAAGAAAACCACTGCCTTAATGATGCAAGTATAACTTTATAGGTACTGTAATTTTAATGTAGCGTGGAAGAAGAATTTCAATTTACGATGGTCAAAGCTAACTGATACTATCCAGGCTGTTGATTGGCAGCAGATGTATTGGGAGAGGCACTTGCAAAGGTATACCTACCTGAAAAGATGGCGTGTTTGTTCACAATGACTCTTGATTCATCTTATATTTATGGTTTGAACTTTTTTGCATGTCAACCATAAAAAGCAGTTGCCTGGATGAAGCGGCAGAAATAGCCTCAGTACCATCTTTTTCTAAATGTATTGGAGAAATAGAGATGTCAGGTGATAACGATGTTTTATTTTTTTTATTTTTTATAAATGTTGTATGGTAATTCGGTGGAACATTCTTCTACCGTTAGTTATTTTTTTTTTATAATAAACGAGGAACCATATTTTTATAGATCAAATGAAAGGGTATATATTGGGCAAAAATTCAAAGACCTTATGCATCTAGCTTATGGGTAAACATGGTTAAAAGTTGTCACTCAACATTGAGTGAGGTGAAAGGTGAACTACGTCCAGTAGCTTACCCCCCTTTCTTTTGCAGATTCTATGCTGAAATATATTGCCAGCGAAGGATCTGTTCATTTATGGTGTGGAAAGTATAGAAAACTAAGCTATCATTGCCAACAGTTTGGGTGCTATGCTCAGTAAGTTCTTCATTATGGCATTTAACTTGGTTCATATACAAGTTGGCAGTTGGATGCATTTCGTTAACTTAGACATAGACAACATGTGGGTGCTATACTTGTTCACTTATTGAGCATTTACTAGTGCTGCTTCTTCAGATTGAATTTGTACTACTGGGTTTTCTTGATGTGCTCAATGTCTTATAGAGGTTCTACTGCTAATGCCATTTAAGTCCACACATTTAAGACTGTCCGTTGTGATTTAATCTAATTTATGCCTATGACTTCTTAGGACATGCATAATAACAGAAAAGTGCCCTTCCAACTACAATCTAACATAGAAATGGACTTGGAATTTAAAGTAGGGTCTTTACCGGAGAAAAGCACAAAAAATAGCTCCCTCAATATCAGTACAAACTTACCAAAAAAAAAAATGAAATAGAGTTAATCTTAGTGATCGAATGTTTTCAATTTTTCTTAGCACATCTTTTTATATCATTACAGTACAATTTATATTTTGTGTTCAGCGGAGGTTTATCTTCTTATCCTATGTACTTTTATTGGTACAGATGTTTGAGCCTTCAGAGTATTCTCTGTGTTTCAGAAATATGTGTAAGTCGATGTATTATTATTATTATTTTTAATACTTTTAATGCCATCGTTGTTCTTTAGATTTCATTTGTATCATTATTCATATTCTGGATAAAACTTGTGCATATCAGTAAAATATGTTTTAAATTCATGTTCATGTAAAAAAAGGATTAATAAATTTTTGTATGGTCTATTTTTAATGCTTTTTTTATTATTATTTTTATTTTAAACATTGGTTTCTTATTGAATAACATAATAATAATAATAATCATAAAAGGAATTATGCAAAATGAAAAATATTGCATTTAGAAGAAAGTTATAAAAGTTGATAAGTAGGTACCATTGTTCCGTGCAACTGGTAATGCTCCTTATGAGAGTGAAAGGGCCCAATTACGCACTTATGCTAAAAGTAATGAAACTTCTTTATGCATTAGTGCTGTTACTCTTCACAGCATTATGAAGTGAAATGGGGACCAAAGATGAGACTCACAAGTCCATTGATTTTTCAATACTAAAAATTATGTCATGTTCTGTATGACAAGCGGGGCTAGCCCTGCCTCTTTAGAATTTATTTTGTGTAACAATTATTTTTTTACCTTCTTTTGTGTGTCACTTCAGTAAAAATCTGTTTTTTTTTTCCCATTTTCTTATTTTTTTCACACTACCATGCTGCAGCATCTATTAAGGAGCTGCAGGTTGCAGACTTTGGTATTAAGGTGGATCAGATTCCAGGAGCAAGTGAGTTCAGTTCTTATTTATGTATGAATTAATAGATAATTTCTTCTTGCATATTAAATGAGTATAAGAAAATGCCTTGATTTGGTGTTGAATCCTAGTTGCTGTCCTTTATATTTTAATGATGGAGCAAGCGTTCATAATTTATTCTTGGTTAAATTACAAGATTAGTCTTTGCGGTTTAAAAAAAGGTCTGATTGGTCTTAAAAAATTTTAATTTCCAAAAGAATTATCTCTGCTCTTTGAAGATTCTATCGTTTCTCTTGCCTCACGGCTCCCACAAAATAGCACACACTCCAACCTTCCACAAAAGCAACCCTTTATCGCAAAAGGGCAGATGAAGGAAAAGCTCCTCAAGCATCTCCATCTAACTTAGAATGTTGTCAAAGTTGAAACTAAACGCATCATAGAAATCATGTCGGACAGCACAAACAAAATTACAACTCCACAAGATATGATCCATGTCCTCTGCCACCCTCTTGTAGAGAATACAACAATGCACCCAACCACCAAAGACCCTCAAGCCGAGACCCAATCCAAGGTATTAACTCTTCTATGCAACACTGGCCACAACGTCTGAAGTTTCCCTATCAATCAAAGGACGATGAAAACCCAAGGAATGATAAGGCAACAAGTCTGCACCATCGAGGATCGAACGAACAAAATGATTTTTAAGAGAGGAAAATGATATAAATGAGGGTATAAGGAGTAGAGGAGTTTTTTCCTCAACCACTCTCTCCCCAAAGTAAGTGTCCCGCCCATTCCCAACCTCATTATGAATAACACGAGAATAAGAAGAAACTTAGAAGAAATTTCTTTCCACGGGTTTCGGGAAGTTCCTTTTAACCCCTTACTGGACCAATCAAAGGGATGAGGCCTGTACTTACTAACAATAACCTTGTACCATAAGGTATTGGCTTTAATATAGAATTGCCAAATCCATTTAGCCAACAAGTATGTGTTTTTTGCCCTAATATTACCAATACCTAGACCTCTTATGTCCGGAGGCCTAGTGACCACCTCCCATCTCACCGGGTGAGAACCCTTCCCTTCTTTGACCCCCTCCCATAAGAAATCTGTCATTAGTTTTTTTGTGTAATGTTGATCGTGGGAGGTTATATTTTTTGTATAATGTCATAGTAGATTGTTTTTATTGGTATTGATGAAGTTTATGATGTGCGTTTTAGTTTTGGGCTTCCTTTTTGTTTTCGTCTCCTCGAAAATTTGGTGGCAAGTAATTTTCAAGTAACTTATAACTTTTCATATATCATTTAAATGTGTTATTGTGACTTGGCTTTATATTTGCACAGGTCAGTGGGTTATGCAAACTCCTAAACCAGAACAGAGAAACTTTAACATCCCTTGAACTCATTCATTGCAAGCTATCTTCAGCTTCTGTTAATTCAATTTGTGATGCTCTACTCCATAATAGAAAAACACATGGTGTACTGCACTTCTCAATTAATGCATCATACTTCGATGAAACTGACCCTGTTGCTCTTCCTTCGGGACTAGTATCATTTTTGTCATTAGGAAGGTACGTCTACCAATTTGGATTTCACCTATTTTCATTTTTTTAATGCGTATGAGAAACATATTGTGTCGGAGTGTTAAATATAAAAGCAAGAGGTATGTTGGCCTTCAACAGTATGATACTCTTACTTATCCCATTTTGTCCTATATCTTTGACCCAATCAATTGGGAAAGTAAAAAGATATTGCTTGCACGAGCTTCTATTTATTTTGAATTGCTTATATCTCTTCAACTTTTTTTAAAGCTTGGTTGCAACTATTTTTTCTATTTATTTTCAGGAATTTATATTCTTTCAAACTCTGTGAGAACTTCCTGGGCAAAAATTTTGGGAAACTTGTCTTTCACACTCTTCTTGATGCTTCATCTTGTTTATCTGACCTTGATCTTTCTGAAAATAATGTGAGTATGCATATTTTTTCTTCTCAAAATTTGGTTGTTATGAAGGCAATCAAAGCAATACCTTTCCAAGAACTTTGCAGATGGCAGGATGGCTCTCCAATTTTAATAGGAGATCTTTGAGCGGCATTCCAGCATTTTCTATTGCTGGCAAGTCCTTGCAATCACTGCGTGTACTCAATTTAAGGTATCAAAGATACTTTGTTGTGATGTAGCCTAGGATTGGGTTAAATTGGACTAGATTCATTTAAATCTTGGTAAAGCTTGGATAATTCCTTTTTAATTTTCTTTTTGTATTTTAATTCCATTCGTAATTCTTGTGTGTGCAGTAAGTCGTGTCTATGAACAGACAAGTACTTCGACCGCCGTATTTGTCTATTGGGTGCTCCCCAATAGTTTACCATCAAGGGAAGTTCACGTTAGGATGACCCTAGGTCCCCAGTAGGTGACTAATAAACTCCCTAGCAGACCCTAACCCATCAAGGGAAGTTCACGATTAGGATGACTCCCCAACTATTCCTACTTGGTAATTAGTCTACCTGAAATGCCTGTGAGACGAAATGTAGGTTTTATGACTTAGGAAATGTAAAACAATAGCTCATGTTCATTTATACGTCTTTTTAGACTCTCTAGACCCATATCAAATATCCAAAGTATAATTGGGCGTACATGGGTGTTTAAAGTTTGCAATTTAGTAGAATAGTTTACTTCTGGTAATCCTTGTGCTGAGATGCATCATTTTTCTTATTTTAGGGGAAACGAGCTGCGCAAAGATGATGCAGATAACCTAAGATATGCTTTGGCTCATATACCAAACTTGGAGTTCTTGGATATAAGTGATAATCCCATCGAGGATGATGGAATCAGGTCCTTTTTTTTTTTTCTTTTGTCGTGTGCTATTTAGCTCTAGCATAAGCAAGTTCTTACCAACCTTTGTGGATTTGCAGGAACTTAATCCCTTATTTTGTTGAAGTTTCTGAAAGAAGCTTTCCTTTTGCTGATCTAAATTTAGAGAACTGTGAGCTTTCCTGTGATGGAGTCACACAACTCTTAAATGTGTTGACGACTTTAAGGAAACCACTGAGGTCACTTTCTCTTGCAGATAATAGCCTTGGAAGGTTTGCATAACTGACAATAACCAGAAATTACCACTATTTAATATTTTCCACTCATATATTCGATTCTGTATACCTTTTTTTTTAAGCTCGGTAGCAGCAGCTTTGGGTGTTTTCATGCGGAAATCAATTCAAGTACTGAATGTTGAAGGCATTGGCTTGGGTCCATGCGGGTTTCAGGATTTAATTGAAGGAATACCTGAAGGGTCAAATATTGTGAACATCAATATAAGGTTCAAAATTAACATTCAAGAACTACTTCATTATTCCTCTTTTCTAGATTGCCTCAAGATCTAGATGCCTATGTTTCGTATTGTAGCAAAAACCGTGGTGGGATAGAGATAGCAACATTTTTGTTGAAGCTCTTGCCTGGGGCATCAGATCTTGTTTCTGTCAATGCGTCATACAATCTAATGCCCGTTGAATCCTTAAGCATCATTCGTTCTGCCCTGAAAAGCGCTAAAGGTACTTATTGTACAAATTGAATCTTTGTGTTAATTTATTATCGTCATGTTTTTACTTTTACATTTAACAATATTCAAGGCTAGAGTTGGGGAGTTTTGGGTGGAAACGCAATTTTCATTTCTATCCTCCAAAAAGATCATGAATATTATTAAAGAATCGTTCAAATATAGATTCTAGCCTAGGATATCTACACGTTGCGATATCGCCCTTGTCCTTGATCTTTTCTTTCTCTAGGCTGGTGTTACTTACCGAGAATGAACTACTCGAATCAAGTAACCAAATCTCACAGTCAGAAGAAGAATTAAGTTGACACTGCTGAGATGAAAAATAATCTCGCTGAATAGAGCAATTTAATCATCTTTTAAATTTCTTTTAAGAACTATTTTCTAGGAATTACTAGAAGAATCCCAAGAGTCTGCTATTGAACAATTCTAAGTAGTAGACAATCTGAAAATGGACGAAAATCTGGATGATAGAGTATTATGAATCCAAGCATCTTTCCAAAATGAGATTCTATCCCCTGAGCCAATTTAAAGGGTTATAAAGAATCCACAATATGCTGAAGCTTCAGAATATTCGTCCGAGGGCTTCGACACAAACATGTAATACGAAGAGATGGGATCTTTGAATATGAGCTAAATTTTTTTATTGCTATGAAGTGCATGAGATAAATGATTTTATTTACTTGATGTTAGCTAGATCCTTAGAATTCATCATATGCTATTACTTCATGTTGTTTGTGGAGTGATAAGATACTCGAGGATTTATGTCTTAAAACATAGGTAACCTAAAGCTATTGGATTTGGGGGGAAACAATTGGGATGGTCAAAAGGCTGAAGATTCACTGTTCGCGGAGTTTCGGGATGGTGACAGGAAAATTTTAATAGATTCATCATCACCAACTTTGGATGGACTCTATGATGGTGACCCGTAGTCGAGTTTGGCTGTAGCATCATATAACCGTTCGAGCTCGTGGAAATTTTTGGACTGCATATACGACCCACCAACATGTAATGTCAAGTTGTCTTTGACTTCGTTCTTTTTTGCTGTGTTTACAAGTATTTTTGCCTTCACTTCTTGCAGTAAAAGCAGATAGTGTGATTATGCTCAGTTATTGGTCAATCCATTGAGCTGTAAAGAAATAAAGTACGTAGAACTTATATATCATCGGCTTAATGGAATAGGCCGTTCTTAACATTTTATTGTTGAGGTATCAGATCCTTGCTACGTTAACTCTAACATTTTATGAAGTTTCTGCTTTGAGGAGTGCAGCTGTAGTAACAAAGGAACTCCATAACCTTTTCGTGTTAGATTCTCGACGTTCACTGAAACCTGGACGATGAACTTCGAAGGTATTGAATGATTTTTGTGAACGTTATTGTAGTGTAGAAATTCTGCATTGGACAATTGGTAACTATACTTTTGAAGCACATGCATGT

mRNA sequence

CCACGGATGGTTATCAGATATTTTTACAAAGTAACACAGAAAATAACATATAATTTTGATCTGTTCTTGGTGGCTGAATGCCGTGAAAACGCCGTCTCCGCCGCTATTTCTCCTCTTCCGCCGTACAATTCCGGTGTCCGTCTTCCTTCGGTAATAATTCCTAATCTTGTACTCGTCGCTGACCATTGTCCAGTTCCATTTCCAATTCTGTTCTTTTCCATTTCAGTTTTCATGGCTGAAGCTCCTTCGCTGCTCTTTCTATGCACAGCCCTAGTCAGAGACGAGATCGTTCGAAGGGATGACGTTCCACCGGCTGTCTATGACCTTCCTCCCGACCTGTTGGATACCCTGGCTTCGCAGCTGCCACCGTTGGCTTTGCAGAATTTACAGTCTGGAATGCCATTTGAGCTCCAGAATGAAGATGAATATGATAATGATTGCCCTAAGGATGGGCGGAAGCGCAGAAGGTACTGTAATTTTAATGTAGCGTGGAAGAAGAATTTCAATTTACGATGGTCAAAGCTAACTGATACTATCCAGGCTGTTGATTGGCAGCAGATGTATTGGGAGAGGCACTTGCAAAGTTGCCTGGATGAAGCGGCAGAAATAGCCTCAGTACCATCTTTTTCTAAATGTATTGGAGAAATAGAGATGTCAGATTCTATGCTGAAATATATTGCCAGCGAAGGATCTGTTCATTTATGGTGTGGAAAGTATAGAAAACTAAGCTATCATTGCCAACAGTTTGGGTGCTATGCTCAATGTTTGAGCCTTCAGAGTATTCTCTGTGTTTCAGAAATATGTCATCTATTAAGGAGCTGCAGGTTGCAGACTTTGGTATTAAGGTGGATCAGATTCCAGGAGCAAGTCAGTGGGTTATGCAAACTCCTAAACCAGAACAGAGAAACTTTAACATCCCTTGAACTCATTCATTGCAAGCTATCTTCAGCTTCTGTTAATTCAATTTGTGATGCTCTACTCCATAATAGAAAAACACATGGTGTACTGCACTTCTCAATTAATGCATCATACTTCGATGAAACTGACCCTGTTGCTCTTCCTTCGGGACTAGTATCATTTTTGTCATTAGGAAGGAATTTATATTCTTTCAAACTCTGTGAGAACTTCCTGGGCAAAAATTTTGGGAAACTTGTCTTTCACACTCTTCTTGATGCTTCATCTTGTTTATCTGACCTTGATCTTTCTGAAAATAATCTGCGCAAAGATGATGCAGATAACCTAAGATATGCTTTGGCTCATATACCAAACTTGGAGTTCTTGGATATAAGTGATAATCCCATCGAGGATGATGGAATCAGGAACTTAATCCCTTATTTTGTTGAAGTTTCTGAAAGAAGCTTTCCTTTTGCTGATCTAAATTTAGAGAACTGTGAGCTTTCCTGTGATGGAGTCACACAACTCTTAAATGTGTTGACGACTTTAAGGAAACCACTGAGGTCACTTTCTCTTGCAGATAATAGCCTTGGAAGCTCGGTAGCAGCAGCTTTGGGTGTTTTCATGCGGAAATCAATTCAAGTACTGAATGTTGAAGGCATTGGCTTGGGTCCATGCGGGTTTCAGGATTTAATTGAAGGAATACCTGAAGGGTCAAATATTGTGAACATCAATATAAGCAAAAACCGTGGTGGGATAGAGATAGCAACATTTTTGTTGAAGCTCTTGCCTGGGGCATCAGATCTTGTTTCTGTCAATGCGTCATACAATCTAATGCCCGTTGAATCCTTAAGCATCATTCGTTCTGCCCTGAAAAGCGCTAAAGGTAACCTAAAGCTATTGGATTTGGGGGGAAACAATTGGGATGGTCAAAAGGCTGAAGATTCACTGTTCGCGGAGTTTCGGGATGGTGACAGGAAAATTTTAATAGATTCATCATCACCAACTTTGGATGGACTCTATGATGGTGACCCGTAGTCGAGTTTGGCTGTAGCATCATATAACCGTTCGAGCTCGTGGAAATTTTTGGACTGCATATACGACCCACCAACATTAAAAGCAGATAGTGTGATTATGCTCAGTTATTGGTCAATCCATTGAGCTGTAAAGAAATAAAGTACGTAGAACTTATATATCATCGGCTTAATGGAATAGGCCGTTCTTAACATTTTATTGTTGAGGTATCAGATCCTTGCTACGTTAACTCTAACATTTTATGAAGTTTCTGCTTTGAGGAGTGCAGCTGTAGTAACAAAGGAACTCCATAACCTTTTCGTGTTAGATTCTCGACGTTCACTGAAACCTGGACGATGAACTTCGAAGGTATTGAATGATTTTTGTGAACGTTATTGTAGTGTAGAAATTCTGCATTGGACAATTGGTAACTATACTTTTGAAGCACATGCATGT

Coding sequence (CDS)

CCACGGATGGTTATCAGATATTTTTACAAAGTAACACAGAAAATAACATATAATTTTGATCTGTTCTTGGTGGCTGAATGCCGTGAAAACGCCGTCTCCGCCGCTATTTCTCCTCTTCCGCCGTACAATTCCGGTGTCCGTCTTCCTTCGGTAATAATTCCTAATCTTGTACTCGTCGCTGACCATTGTCCAGTTCCATTTCCAATTCTGTTCTTTTCCATTTCAGTTTTCATGGCTGAAGCTCCTTCGCTGCTCTTTCTATGCACAGCCCTAGTCAGAGACGAGATCGTTCGAAGGGATGACGTTCCACCGGCTGTCTATGACCTTCCTCCCGACCTGTTGGATACCCTGGCTTCGCAGCTGCCACCGTTGGCTTTGCAGAATTTACAGTCTGGAATGCCATTTGAGCTCCAGAATGAAGATGAATATGATAATGATTGCCCTAAGGATGGGCGGAAGCGCAGAAGGTACTGTAATTTTAATGTAGCGTGGAAGAAGAATTTCAATTTACGATGGTCAAAGCTAACTGATACTATCCAGGCTGTTGATTGGCAGCAGATGTATTGGGAGAGGCACTTGCAAAGTTGCCTGGATGAAGCGGCAGAAATAGCCTCAGTACCATCTTTTTCTAAATGTATTGGAGAAATAGAGATGTCAGATTCTATGCTGAAATATATTGCCAGCGAAGGATCTGTTCATTTATGGTGTGGAAAGTATAGAAAACTAAGCTATCATTGCCAACAGTTTGGGTGCTATGCTCAATGTTTGAGCCTTCAGAGTATTCTCTGTGTTTCAGAAATATGTCATCTATTAAGGAGCTGCAGGTTGCAGACTTTGGTATTAAGGTGGATCAGATTCCAGGAGCAAGTCAGTGGGTTATGCAAACTCCTAAACCAGAACAGAGAAACTTTAACATCCCTTGAACTCATTCATTGCAAGCTATCTTCAGCTTCTGTTAATTCAATTTGTGATGCTCTACTCCATAATAGAAAAACACATGGTGTACTGCACTTCTCAATTAATGCATCATACTTCGATGAAACTGACCCTGTTGCTCTTCCTTCGGGACTAGTATCATTTTTGTCATTAGGAAGGAATTTATATTCTTTCAAACTCTGTGAGAACTTCCTGGGCAAAAATTTTGGGAAACTTGTCTTTCACACTCTTCTTGATGCTTCATCTTGTTTATCTGACCTTGATCTTTCTGAAAATAATCTGCGCAAAGATGATGCAGATAACCTAAGATATGCTTTGGCTCATATACCAAACTTGGAGTTCTTGGATATAAGTGATAATCCCATCGAGGATGATGGAATCAGGAACTTAATCCCTTATTTTGTTGAAGTTTCTGAAAGAAGCTTTCCTTTTGCTGATCTAAATTTAGAGAACTGTGAGCTTTCCTGTGATGGAGTCACACAACTCTTAAATGTGTTGACGACTTTAAGGAAACCACTGAGGTCACTTTCTCTTGCAGATAATAGCCTTGGAAGCTCGGTAGCAGCAGCTTTGGGTGTTTTCATGCGGAAATCAATTCAAGTACTGAATGTTGAAGGCATTGGCTTGGGTCCATGCGGGTTTCAGGATTTAATTGAAGGAATACCTGAAGGGTCAAATATTGTGAACATCAATATAAGCAAAAACCGTGGTGGGATAGAGATAGCAACATTTTTGTTGAAGCTCTTGCCTGGGGCATCAGATCTTGTTTCTGTCAATGCGTCATACAATCTAATGCCCGTTGAATCCTTAAGCATCATTCGTTCTGCCCTGAAAAGCGCTAAAGGTAACCTAAAGCTATTGGATTTGGGGGGAAACAATTGGGATGGTCAAAAGGCTGAAGATTCACTGTTCGCGGAGTTTCGGGATGGTGACAGGAAAATTTTAATAGATTCATCATCACCAACTTTGGATGGACTCTATGATGGTGACCCGTAG

Protein sequence

PRMVIRYFYKVTQKITYNFDLFLVAECRENAVSAAISPLPPYNSGVRLPSVIIPNLVLVADHCPVPFPILFFSISVFMAEAPSLLFLCTALVRDEIVRRDDVPPAVYDLPPDLLDTLASQLPPLALQNLQSGMPFELQNEDEYDNDCPKDGRKRRRYCNFNVAWKKNFNLRWSKLTDTIQAVDWQQMYWERHLQSCLDEAAEIASVPSFSKCIGEIEMSDSMLKYIASEGSVHLWCGKYRKLSYHCQQFGCYAQCLSLQSILCVSEICHLLRSCRLQTLVLRWIRFQEQVSGLCKLLNQNRETLTSLELIHCKLSSASVNSICDALLHNRKTHGVLHFSINASYFDETDPVALPSGLVSFLSLGRNLYSFKLCENFLGKNFGKLVFHTLLDASSCLSDLDLSENNLRKDDADNLRYALAHIPNLEFLDISDNPIEDDGIRNLIPYFVEVSERSFPFADLNLENCELSCDGVTQLLNVLTTLRKPLRSLSLADNSLGSSVAAALGVFMRKSIQVLNVEGIGLGPCGFQDLIEGIPEGSNIVNINISKNRGGIEIATFLLKLLPGASDLVSVNASYNLMPVESLSIIRSALKSAKGNLKLLDLGGNNWDGQKAEDSLFAEFRDGDRKILIDSSSPTLDGLYDGDP

Homology

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BLAST of Cp4.1LG12g10320 vs. Swiss-Prot
Match: NALP5_BOVIN (NACHT, LRR and PYD domains-containing protein 5 OS=Bos taurus GN=NLRP5 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 4.5e-11
Identity = 88/292 (30.14%), Postives = 127/292 (43.49%), Query Frame = 1


Query: 264  VSEICHLLR--SCRLQTLVLRWIRFQEQVSGLCKLLNQNRET---LTSLELIHCKLSSAS 323
            V   C  LR   C L++L L            C+ ++Q   T   L SL L   K++   
Sbjct: 753  VQTACEALRHPQCALESLRLDRCGL---TPASCREISQVLATSGSLKSLSLTGNKVADQG 812

Query: 324  VNSICDALLHNRKTHGVLHFSINASYFDETDPVALPSGLVSFLSLGRNLYSFKLCENFLG 383
            V S+CDAL   + T   L   I  S        A    L S L   + L    L  + LG
Sbjct: 813  VKSLCDAL---KVTPCTLQKLILGSC---GLTAATCQDLASALIENQGLTHLSLSGDELG 872

Query: 384  KNFGKLVFHTLLDASSCLSDLDLSENNLRKDDADNLRYALAHIPNLEFLDISDNPIEDDG 443
                 L+   +  +S  L  L L+  +L       L +AL    +L  L +S NP+ED G
Sbjct: 873  SKGMSLLCRAVKLSSCGLQKLALNACSLDVAGCGFLAFALMGNRHLTHLSLSMNPLEDPG 932

Query: 444  IRNLIPYFVEVSERSFPFADLNLENCELSCDGVTQLLNVLTTLRKP-LRSLSLADNSLGS 503
            +  L    +E S    P  DL+L NC L+      L NV+T  R P LRSL LA N+LG 
Sbjct: 933  MNLLCEVMMEPS---CPLRDLDLVNCRLTASCCKSLSNVIT--RSPRLRSLDLAANALGD 992

Query: 504  SVAAAL--GVFMRKSIQVLNVEGIGLGPCGFQDLIEGIPEGSNIVNINISKN 548
               AAL  G+  + ++  L +E  GL   G + L   +    ++ ++N+ +N
Sbjct: 993  EGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSAALTCSRHLASLNLMRN 1030

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BLAST of Cp4.1LG12g10320 vs. Swiss-Prot
Match: RINI_PIG (Ribonuclease inhibitor OS=Sus scrofa GN=RNH1 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 6.8e-07
Identity = 67/255 (26.27%), Postives = 106/255 (41.57%), Query Frame = 1


Query: 359 SFLSLGRNLYSFKLCENFLGKNFGKLVFHTLLDASSCLSDLDLSENNLRKDDADNLRYAL 418
           S L    +L    L  N LG     LV   L   +  +  L L   +L +     L   L
Sbjct: 45  SALRANPSLTELCLRTNELGDAGVHLVLQGLQSPTCKIQKLSLQNCSLTEAGCGVLPSTL 104

Query: 419 AHIPNLEFLDISDNPIEDDGIRNLIPYFVEVSERSFPFADLNLENCELSCDGVTQLLNVL 478
             +P L  L +SDNP+ D G+R L    +   +       L LE C L+      L +VL
Sbjct: 105 RSLPTLRELHLSDNPLGDAGLRLLCEGLL---DPQCHLEKLQLEYCRLTAASCEPLASVL 164

Query: 479 TTLRKPLRSLSLADNSLGSSVAAALGVFMRKS---IQVLNVEGIGLGPCGFQDLIEGIPE 538
              R  L+ L++++N +G + A  LG  +  S   ++ L +E  GL P   +DL   +  
Sbjct: 165 RATR-ALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENCGLTPANCKDLCGIVAS 224

Query: 539 GSNIVNINISKNRGGIEIATFLLKLLPGASDLVSVNASYNLMPVESLSIIRSALK----- 598
            +++  +++  N  G      + +L PG   L+S  +    + +    I  S  +     
Sbjct: 225 QASLRELDLGSNGLG---DAGIAELCPG---LLSPASRLKTLWLWECDITASGCRDLCRV 284

Query: 599 -SAKGNLKLLDLGGN 605
             AK  LK L L GN
Sbjct: 285 LQAKETLKELSLAGN 289

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BLAST of Cp4.1LG12g10320 vs. Swiss-Prot
Match: CARL1_HUMAN (F-actin-uncapping protein LRRC16A OS=Homo sapiens GN=LRRC16A PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 8.8e-07
Identity = 64/252 (25.40%), Postives = 103/252 (40.87%), Query Frame = 1


Query: 309 LIHCKLSSA--SVNSICDALLHNRKTHGVLHFSINASYFDETDPVALPSGLVSFLSLGRN 368
           ++H  LS+   S++ +C ALL     +  +  +++ + F       +P     F S    
Sbjct: 367 IVHLDLSNTECSLDMVCGALLRGCLQYLAV-LNLSRTVFSHRKGKEVPPSFKQFFSSSLA 426

Query: 369 LYSFKLCENFLGKN------FGKLVFHTLLDASSCLSDLDLSENNLRKDDADNLRYALAH 428
           L    L    L          G    H L   S     LDLS   LR   A  L   +A 
Sbjct: 427 LMHINLSGTKLSPEPLKALLLGLACNHNLKGVS-----LDLSNCELRSGGAQVLEGCIAE 486

Query: 429 IPNLEFLDISDNPIEDDGIRNLIPYFVEVSERSFPFADLNLENCELSCDGVTQLLNVLTT 488
           I N+  LDISDN +E D +  LI +  +   RS     L      +    +T +L+ L  
Sbjct: 487 IHNITSLDISDNGLESD-LSTLIVWLSK--NRSIQHLALGKNFNNMKSKNLTPVLDNLVQ 546

Query: 489 L----RKPLRSLSLADNSLGSSVAAALGVF-MRKSIQVLNVEGIGLGPCGFQDLIEGIPE 548
           +      PL+SLSLAD+ L + V   +       S+  +++ G G+G  G + L + +  
Sbjct: 547 MIQDEESPLQSLSLADSKLKTEVTIIINALGSNTSLTKVDISGNGMGDMGAKMLAKALQI 606

[Close]

BLAST of Cp4.1LG12g10320 vs. TrEMBL
Match: A0A0A0K4G5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G330390 PE=4 SV=1)

HSP 1 Score: 816.2 bits (2107), Expect = 2.8e-233
Identity = 419/532 (78.76%), Postives = 449/532 (84.40%), Query Frame = 1


Query: 150 DGRKRRRYCNFNVAWKKNFNLRWSKLTDTIQAVDWQQMYWERHLQSCLDEAAEIASVPSF 209
           DGRKRRR  NFN+AWKKNF+LRWSKLTDTIQ VDWQQ+YWE HLQSCLDEAAEIAS+PSF
Sbjct: 2   DGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSF 61

Query: 210 SKCIGEIEMSDSMLKYIASEGSVHLWCGKYRKLSYHCQQFGCYAQCLSLQSILCVSEICH 269
           SKCIGEIEMSDS+LKYIAS+ SVH W  KYR LSYHCQ+FGCYA CL LQS+LCVSEI H
Sbjct: 62  SKCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQEFGCYALCLRLQSVLCVSEIYH 121

Query: 270 LLRSCRLQTLVLRWIRFQEQVSGLCKLLNQNRETLTSLELIHCKLSSASVNSICDALLHN 329
           +LRSCRLQTL+LRWIRF EQV+GLCKLLNQNRETLTSLELIHCKLSS SVNSICDAL+HN
Sbjct: 122 ILRSCRLQTLLLRWIRFPEQVNGLCKLLNQNRETLTSLELIHCKLSSTSVNSICDALIHN 181

Query: 330 RKTHGVLHFSINASYFDETDPVALPSGLVSFLSLGRNLYSFKLCENFLGKNFGKLVFHTL 389
           RKTHG+LHFSIN S FDET+PVALPSGLVSF S GR LYSFKLC+N LGKNFGK VFHTL
Sbjct: 182 RKTHGILHFSINGSRFDETEPVALPSGLVSFFSSGRYLYSFKLCDNDLGKNFGKFVFHTL 241

Query: 390 LDASSCLSDLDLSENNL--------RKDDA------------------------------ 449
           LDASSCLS LDLSEN +        R+                                 
Sbjct: 242 LDASSCLSVLDLSENKMTGWLSNFNRRSLTGLQASSMVGKSLQSLRVLNLRGNGLKKDDA 301

Query: 450 DNLRYALAHIPNLEFLDISDNPIEDDGIRNLIPYFVEVSERSFPFADLNLENCELSCDGV 509
           DNLRYAL HIPNLEFLD+SDNPIEDDGIRNLIPYF+E SER+ PFADLNLENCELSCDGV
Sbjct: 302 DNLRYALFHIPNLEFLDMSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGV 361

Query: 510 TQLLNVLTTLRKPLRSLSLADNSLGSSVAAALGVFMRKSIQVLNVEGIGLGPCGFQDLIE 569
           TQLLNVL+TLRKPLRSLS+ADNSLGSSVA ALGVFM KSIQ+LNVEGIGLGPCGFQDL+E
Sbjct: 362 TQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVE 421

Query: 570 GIPEGSNIVNINISKNRGGIEIATFLLKLLPGASDLVSVNASYNLMPVESLSIIRSALKS 629
           G+  GSNIVNINISKNRGGIEIATFLLKLL GASDLVSVNASYNLMPVESL IIRSALK 
Sbjct: 422 GVTAGSNIVNINISKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKI 481

Query: 630 AKGNLKLLDLGGNNWDGQKAEDSLFAEFRDGDRKILIDSSSPTLDGLYDGDP 644
           AKG L+LLDL GNNWD QKA+DSL AEF++  +KILI SSSP LDGLYD DP
Sbjct: 482 AKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILIYSSSPNLDGLYDADP 533

[Close]

BLAST of Cp4.1LG12g10320 vs. TrEMBL
Match: M5VNW6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003067mg PE=4 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 1.9e-178
Identity = 341/604 (56.46%), Postives = 431/604 (71.36%), Query Frame = 1


Query: 79  AEAPSLLFLCTALVRDEIVRRDDVPPAVYDLPPDLLDTLASQLPPLALQNLQSGMPFELQ 138
           +E PSL+ LC   V++E+VR DD+ P + +LP +L+D LAS+LPPLAL+ LQ+ +PF+ +
Sbjct: 4   SEIPSLVSLCIEAVKNELVRGDDLLPIIKELPGNLVDILASRLPPLALEKLQTAVPFDDR 63

Query: 139 NEDEYDNDCPKDGRKRRRYCNFNVAWKKNFNLRWSKLTDTIQAVDWQQMYWERHLQSCLD 198
           ++ ++ ++  ++GRKR R  NF+ AWK     RW  L + I+ +DWQQMYWE HLQ+CLD
Sbjct: 64  DDHDFADEGLRNGRKRGRSWNFSTAWKNLVKSRWPNLGNQIEPIDWQQMYWETHLQNCLD 123

Query: 199 EAAEIASVPSFSKCIGEIEMSDSMLKYIASEGSVHLWCGKYRKLSYHCQQFGCYAQCLSL 258
           E AEIAS+PSF   +GEI +SDS+LK I  EG +      Y KL +HCQQFG YA+CL L
Sbjct: 124 EVAEIASLPSFDGRLGEIGISDSILKLIGFEGCMDTSTCDYSKLYHHCQQFGYYARCLRL 183

Query: 259 QSILCVSEICHLLRSCRLQTLVLRWIRFQEQVSGLCKLLNQNRETLTSLELIHCKLSSAS 318
           Q++LC +EI HLLR+  LQ+L LRWIR +E + GLCKLLNQN E+LTSLE IHCKLSS S
Sbjct: 184 QNVLCSAEISHLLRNSLLQSLELRWIRSKEHIDGLCKLLNQNSESLTSLEFIHCKLSSDS 243

Query: 319 VNSICDAL-LHNRKTHGVLHFSINASYFDETDPVALPSGLVSFLSLGRNLYSFKLCENFL 378
           +N+IC +L   N +THG+ +FSIN S F ET+PV+LP GLVSFLS GR+LYS KL +N L
Sbjct: 244 INAICSSLPTKNVQTHGIKNFSINTSNFLETNPVSLPLGLVSFLSSGRSLYSLKLSDNHL 303

Query: 379 GKNFGKLVFHTLLDASSCLSDLDLSENNL---------RKDD------------------ 438
           G+NF KLVF TLL+ASS LS LDLS+NN+         R                     
Sbjct: 304 GRNFAKLVFGTLLNASSSLSILDLSDNNISGWLSELYWRSPSGPPTPLGIGKSFQSLRVL 363

Query: 439 -----------ADNLRYALAHIPNLEFLDISDNPIEDDGIRNLIPYFVEVSERSFPFADL 498
                      AD LRYAL HIPNLE LD+SDNPIED GIR+LIPYFVE SE+ FPFADL
Sbjct: 364 NLRGNNLNKDDADGLRYALVHIPNLEVLDMSDNPIEDAGIRSLIPYFVEASEKCFPFADL 423

Query: 499 NLENCELSCDGVTQLLNVLTTLRKPLRSLSLADNSLGSSVAAALGVFMRKSIQVLNVEGI 558
            LENCELSC GVT L++ L+TL++PL+SLS+ADN LGS VAAALG  +  SIQ+LNVEGI
Sbjct: 424 MLENCELSCHGVTYLIDTLSTLQRPLKSLSVADNDLGSQVAAALGKLLSTSIQILNVEGI 483

Query: 559 GLGPCGFQDLIEGIPEGSNIVNINISKNRGGIEIATFLLKLLPGASDLVSVNASYNLMPV 618
           GLG  GFQ+L +GI +   +V +NISKNRGGIE A FL KL+  A +LV+V+A+YNLMP+
Sbjct: 484 GLGSSGFQELQDGITKELKLVKVNISKNRGGIETANFLSKLISMAPELVTVDAAYNLMPL 543

Query: 619 ESLSIIRSALKSAKGNLKLLDLGGNNWDGQKAEDSLFAEFRDGDRKILIDSSSPTLDGLY 644
           +SL+ I SALK+AKGN++ LDL GN WD Q    S+ A+ +   R +LI SSSPT D  Y
Sbjct: 544 KSLTTICSALKAAKGNIERLDLRGNIWDYQPGYASMHADIQCNGRPVLILSSSPTPDAPY 603

[Close]

BLAST of Cp4.1LG12g10320 vs. TrEMBL
Match: A0A061DW66_THECC (RNI-like superfamily protein, putative OS=Theobroma cacao GN=TCM_003751 PE=4 SV=1)

HSP 1 Score: 579.7 bits (1493), Expect = 4.4e-162
Identity = 325/604 (53.81%), Postives = 408/604 (67.55%), Query Frame = 1


Query: 78  MAEAPSLLFLCTALVRDEIVRRDDVPPAVYDLPPDLLDTLASQLPPLALQNLQSGMPFEL 137
           M E PSL+ L    V+ E++  DD+ P VY+LPP+L ++L + LPPLALQ LQS M F  
Sbjct: 1   MMEVPSLVSLSIDAVKRELLHGDDLIPHVYELPPELFNSLVNCLPPLALQKLQSEMLFRS 60

Query: 138 QNEDEYDNDCPKDGRKRRRYCNFNVAWKKNFNLRWSKLTDTIQAVDWQQMYWERHLQSCL 197
            ++ +  +D  K+GRKR R  NF+ AWK  F LRW  L + +Q VDWQQ+YWE H+QSCL
Sbjct: 61  YDDYDSTSDDLKNGRKRGRNGNFDKAWKALFKLRWPDLVNCVQPVDWQQIYWETHVQSCL 120

Query: 198 DEAAEIASVPSFSKCIGEIEMSDSMLKYIASEGSVHLWCGKYRKLSYHCQQFGCYAQCLS 257
           DEAAE+A +PSFS C+G I++S+++LKYI     +     +  KLSYHCQQFG YA+CL 
Sbjct: 121 DEAAELALLPSFSGCLGAIQISENILKYIGYVDHMSNSASELLKLSYHCQQFGNYARCLR 180

Query: 258 LQSILCVSEICHLLRSCRLQTLVLRWIRFQEQVSGLCKLLNQNRETLTSLELIHCKLSSA 317
           LQ++LCV E   LLR+ +LQ+LV+RWIR  E   GLCKLL+QN +TLTSL+ +HCKLSS+
Sbjct: 181 LQNVLCVVESSQLLRNSKLQSLVVRWIRSFEHADGLCKLLSQNCKTLTSLKFVHCKLSSS 240

Query: 318 SVNSICDAL-LHNRKTHGVLHFSINASYFDETDPVALPSGLVSFLSLGRNLYSFKLCENF 377
            +++IC +L L   +TH + HFS++ S F E +PV+L   L SFLS GR+L S KLC+N 
Sbjct: 241 FMDAICGSLYLGGAETHQIQHFSVSTSSFLEPNPVSLAHRLASFLSAGRSLCSLKLCDNH 300

Query: 378 LGKNFGKLVFHTLLDASSCLSDLDLSENNL----------------RKDDADNL------ 437
           L  NF + VF TLLDASS LS LDLSENN+                    A +L      
Sbjct: 301 LDWNFARRVFSTLLDASSSLSILDLSENNIAGWLSNFNWRSNALLSSSGVAKSLQSLRIL 360

Query: 438 ---------------RYALAHIPNLEFLDISDNPIEDDGIRNLIPYFVEVSERSFPFADL 497
                          RYAL H+P+LE LD+SDNPIEDDGIR+LIPYF E S+   P  DL
Sbjct: 361 NLRGNNLRKDDAGSLRYALVHMPSLEILDLSDNPIEDDGIRSLIPYFAEASKMFIPLTDL 420

Query: 498 NLENCELSCDGVTQLLNVLTTLRKPLRSLSLADNSLGSSVAAALGVFMRKSIQVLNVEGI 557
           NLENCELS DGVTQLL+ L+++ KPL SLS+ADN LGS VA ALG F   SIQVLN+EGI
Sbjct: 421 NLENCELSYDGVTQLLDALSSVGKPLNSLSVADNGLGSQVAEALGNFWGTSIQVLNLEGI 480

Query: 558 GLGPCGFQDLIEGIPEGSNIVNINISKNRGGIEIATFLLKLLPGASDLVSVNASYNLMPV 617
           GLGP GF+ L +   E   +V INISKNRGGIE A FL KL+  A  L++VNA+YNLMPV
Sbjct: 481 GLGPSGFRKLKDVGMEDLMLVEINISKNRGGIETAKFLSKLIRQAPKLIAVNAAYNLMPV 540

Query: 618 ESLSIIRSALKSAKGNLKLLDLGGNNWDGQKAEDSLFAEFRDGDRKILIDSSSPTLDGLY 644
           ESL II SALK+A G+L+ +DL GN WD Q + D++ AEF+   R ILI  SS   D  Y
Sbjct: 541 ESLIIICSALKTATGHLEQVDLTGNIWDYQPSHDTMLAEFQHNGRPILILPSSVASDVPY 600

[Close]

BLAST of Cp4.1LG12g10320 vs. TrEMBL
Match: A0A0D2SDK3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G151600 PE=4 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 7.7e-159
Identity = 317/606 (52.31%), Postives = 403/606 (66.50%), Query Frame = 1


Query: 78  MAEAPSLLFLCTALVRDEIVRRDDVPPAVYDLPPDLLDTLASQLPPLALQNLQSGMPFEL 137
           M   PSL+ L    ++ E++  DD+ P VY+LP +L ++L   LPPLALQ LQS MPF  
Sbjct: 1   MVNVPSLVSLSIDALKRELIHGDDLLPHVYELPLELFNSLVECLPPLALQKLQSEMPF-- 60

Query: 138 QNEDEY--DNDCPKDGRKRRRYCNFNVAWKKNFNLRWSKLTDTIQAVDWQQMYWERHLQS 197
           +N D+Y   +D  K GRKR RY NF+ AWK  F  RW  L + ++ VDWQQ+YWE H+Q+
Sbjct: 61  KNYDDYGPSSDDLKMGRKRGRYGNFDTAWKALFKFRWPDLAECVKPVDWQQIYWETHVQN 120

Query: 198 CLDEAAEIASVPSFSKCIGEIEMSDSMLKYIASEGSVHLWCGKYRKLSYHCQQFGCYAQC 257
           CLDEAAEIA +PSFS C+GEI++ +++L+YI     +      Y KLSYHCQQFGCY++ 
Sbjct: 121 CLDEAAEIALLPSFSGCLGEIQILENILQYIGYVDDMSNLASDYLKLSYHCQQFGCYSRR 180

Query: 258 LSLQSILCVSEICHLLRSCRLQTLVLRWIRFQEQVSGLCKLLNQNRETLTSLELIHCKLS 317
           L LQ++LCV E C LLR   LQ+LV++WIR  E V+GLCKLLNQN  TLTSLE +HCK+S
Sbjct: 181 LRLQNVLCVLESCQLLRKSNLQSLVVQWIRSSEHVAGLCKLLNQNSRTLTSLEFVHCKIS 240

Query: 318 SASVNSICDALLHN-RKTHGVLHFSINASYFDETDPVALPSGLVSFLSLGRNLYSFKLCE 377
           S+ +++IC +L  +  +TH + HFSI++S F E DPV+L   L SFLS GR+L S KLC+
Sbjct: 241 SSFMDTICGSLCSSGAETHQIHHFSISSSSFHEIDPVSLAHSLASFLSSGRSLRSLKLCD 300

Query: 378 NFLGKNFGKLVFHTLLDASSCLSDLDLSENNLR--------KDDAD-------------- 437
           N L +NF K VF TLLD+S  L+  DLSENN+         K +                
Sbjct: 301 NNLDRNFAKSVFSTLLDSSCSLTSFDLSENNISGWLSIFNWKSNTFLSSSGVTKSLQSLR 360

Query: 438 ---------------NLRYALAHIPNLEFLDISDNPIEDDGIRNLIPYFVEVSERSFPFA 497
                          NLRY L  +P+LE LD+SDNPIEDDGIR+LIPYF E S+   P  
Sbjct: 361 ILKLGGNNLQKDDAGNLRYVLVQMPSLEILDLSDNPIEDDGIRSLIPYFAEASKSCSPLT 420

Query: 498 DLNLENCELSCDGVTQLLNVLTTLRKPLRSLSLADNSLGSSVAAALGVFMRKSIQVLNVE 557
           DLNL +CELS DGV  LL+VL+TL +PL SLSLADN LGS VA ALG F   SIQVLN+E
Sbjct: 421 DLNLGSCELSSDGVILLLDVLSTLARPLNSLSLADNGLGSQVAEALGKFWGTSIQVLNLE 480

Query: 558 GIGLGPCGFQDLIEGIPEGSNIVNINISKNRGGIEIATFLLKLLPGASDLVSVNASYNLM 617
           GIGLGP GF+ L +   E   +V +NISKNRGGIE A FL KL+  A  LV+VNA+YNLM
Sbjct: 481 GIGLGPSGFRKLRDIRMENLKLVKLNISKNRGGIETAKFLSKLILHAPKLVAVNAAYNLM 540

Query: 618 PVESLSIIRSALKSAKGNLKLLDLGGNNWDGQKAEDSLFAEFRDGDRKILIDSSSPTLDG 644
           P ESL +I SALK+AKG ++ +DL GN  + Q + D++ AEF+   + ILI  SS  L+ 
Sbjct: 541 PAESLPLICSALKTAKGLVEQVDLRGNICEYQPSHDTMLAEFQHNGKPILILPSSVALNI 600

[Close]

BLAST of Cp4.1LG12g10320 vs. TrEMBL
Match: V4VUJ0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019392mg PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 1.0e-155
Identity = 321/603 (53.23%), Postives = 394/603 (65.34%), Query Frame = 1


Query: 78  MAEAPSLLFLCTALVRDEIVRRDDVPPAVYDLPPDLLDTLASQLPPLALQNLQSGMPFEL 137
           M +APSL+ L    V+ E++  DDV P V +LP DL D L + LPPLALQ LQ+ M  + 
Sbjct: 1   MVKAPSLISLAALAVKRELLLGDDVIPYVCELPADLFDILLTYLPPLALQKLQTKMDGDD 60

Query: 138 QNEDEYDNDCPKDGRKRRRYCNFNVAWKKNFNLRWSKLTDTIQAVDWQQMYWERHLQSCL 197
               +Y   C ++GRK  RY NFN  WKK F  RWS +TD I+ VDWQQ YWE H+Q CL
Sbjct: 61  CGSPDY---CFENGRKHGRYGNFNTVWKKLFKTRWSGVTDQIEPVDWQQRYWEAHVQGCL 120

Query: 198 DEAAEIASVPSFSKCIGEIEMSDSMLKYIASEGSV-HLWCGKYRKLSYHCQQFGCYAQCL 257
           DEAAE+  +PSF   I +I +SD++L YI  E  + HL C  Y KLSYHCQQFG YA+CL
Sbjct: 121 DEAAELVVLPSFRGLISDINISDTILNYIGYEQQMNHLACD-YSKLSYHCQQFGHYARCL 180

Query: 258 SLQSILCVSEICHLLRSCRLQTLVLRWIRFQEQVSGLCKLLNQNRETLTSLELIHCKLSS 317
            LQ+ LCV E C LLR  +LQ+LVLRWIRF+E V  LCKLL QN ETL SLE +HCKLS 
Sbjct: 181 RLQNALCVEETCQLLRESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSP 240

Query: 318 ASVNSICDALLHNRK-THGVLHFSINASYFDETDPVALPSGLVSFLSLGRNLYSFKLCEN 377
           + V  IC +L   RK  H + + SI+ S F E  P ++   LVSFLS GR+L S KL   
Sbjct: 241 SFVEGICRSLCSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHC 300

Query: 378 FLGKNFGKLVFHTLLDASSCLSDLDLS--------------------------------- 437
            L ++FG++VF +LL+ASS LS LDLS                                 
Sbjct: 301 HLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSLRLLN 360

Query: 438 --ENNLRKDDADNLRYALAHIPNLEFLDISDNPIEDDGIRNLIPYFVEVSERSFPFADLN 497
              NNL K DA +L  AL HIPNLE LDISDN IEDDGIR+LIPYFV+ SER  P  +L 
Sbjct: 361 LRGNNLCKADARDLGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPLVELY 420

Query: 498 LENCELSCDGVTQLLNVLTTLRKPLRSLSLADNSLGSSVAAALGVFMRKSIQVLNVEGIG 557
           LENCELS  GV+QLL+ L+TLR+P  SLS+ADN+LGS +AA+LG F   S+QVLN+  IG
Sbjct: 421 LENCELSGRGVSQLLDTLSTLRRPPTSLSIADNNLGSHIAASLGKFFGTSVQVLNIGAIG 480

Query: 558 LGPCGFQDLIEGIPEGSNIVNINISKNRGGIEIATFLLKLLPGASDLVSVNASYNLMPVE 617
           LG  GF+ L +G+ +   +VNINISKNRGG+E A FL KL+  A DLV VNA YNLMP+E
Sbjct: 481 LGSSGFRVLQDGVTKELKLVNINISKNRGGVETAKFLSKLMSLAPDLVEVNAGYNLMPLE 540

Query: 618 SLSIIRSALKSAKGNLKLLDLGGNNWDGQKAEDSLFAEFRDGDRKILIDSSSPTLDGLYD 644
           SL+II SALK AKG+L+ LDL GNNW+ Q +  S+ +EFR     ILI  +   LD  YD
Sbjct: 541 SLTIICSALKVAKGHLQRLDLTGNNWELQPSHVSMLSEFRHNGLPILILPTLQALDVPYD 599

[Close]

BLAST of Cp4.1LG12g10320 vs. TAIR10
Match: AT2G20210.1 (AT2G20210.1 RNI-like superfamily protein)

HSP 1 Score: 464.9 bits (1195), Expect = 7.9e-131
Identity = 280/609 (45.98%), Postives = 381/609 (62.56%), Query Frame = 1


Query: 78  MAEAPSLLFLCTALVRDEIVRRDDVPPAVYDLPPDLLDTLASQLPPLALQNLQSGMPFE- 137
           M +APSL FLC   ++ +++  D+  P +Y+LP +LLD + + LP LALQ  Q+ MPF  
Sbjct: 1   MTKAPSLAFLCIQSLKIQLLESDNPIPDLYELPSELLDGIVAHLPALALQKFQTNMPFHC 60

Query: 138 LQNEDEYDNDCPKDGRKRRRYCNFNVAWKKNFNLRWSKLTDTIQA-VDWQQMYWERHLQS 197
           L + +  D+ C   GRKR R      +WK  F LRW    D +++  DWQQ+YWE+HLQ+
Sbjct: 61  LDSYESGDDCCLITGRKRARNDVLGSSWKLLFKLRWPDFVDRVESPADWQQLYWEKHLQN 120

Query: 198 CLDEAAEIASVPSFSKCIGEIEMSDSMLKYIASEGSVHLWCGKY--RKLSYHCQQFGCYA 257
           C+DEAAE+A  P+FS  I  I +SD++L+YI  E  + + C     ++LS+H Q FG Y 
Sbjct: 121 CVDEAAEVALRPTFSGRICSINVSDNILRYICHEEHI-MTCQNCVCKELSFHFQTFGPYL 180

Query: 258 QCLSLQSILCVSEICHLLRSCRLQTLVLRWIRFQEQVSGLCKLLNQNRETLTSLELIHCK 317
           +CL L ++LCV+E   LLR+ +L++LVLRWIR ++ V  LCKLL Q+RETLTSLELIHCK
Sbjct: 181 RCLRLLNVLCVTETSELLRTSKLRSLVLRWIRSEKHVEPLCKLLIQSRETLTSLELIHCK 240

Query: 318 LSSASVNSICDALLHNRKTH--GVLHFSINASYFDETDPVALPSGLVSFLSLGRNLYSFK 377
           LS +S+++IC + LH +  H  G+  F I  S   E DP+A PS  VSFL   R L+S  
Sbjct: 241 LSLSSISAICTS-LHEKGIHTTGMQRFCIKTSSI-EIDPLAAPSAFVSFLMSVRTLHSLH 300

Query: 378 LCENFLGKNFGKLVFHTLLDASSCLSDLDLSENN-------------------------- 437
             ++ L + F ++VF TLLD+SS LS LDLSENN                          
Sbjct: 301 FGDSNLDRYFARMVFSTLLDSSSNLSSLDLSENNISGWLSTFSCKSVVGSLSSGKSLQSL 360

Query: 438 ---------LRKDDADNLRYALAHIPNLEFLDISDNPIEDDGIRNLIPYFVEVSERSFPF 497
                    L + DA+NL +AL H+P LE LD+S NPIED GIR+LI YF +  +     
Sbjct: 361 CKLNLRGNELDRYDAENLAHALLHMPGLESLDLSGNPIEDSGIRSLISYFTKNPDSR--L 420

Query: 498 ADLNLENCELSCDGVTQLLNVLTTLRKPLRSLSLADNSLGSSVAAALGVFMRKSIQVLNV 557
           ADLNLENCELSC GV + L+ L+ L KPL+ LS+ADN+LGS VA A+      SI+ LN+
Sbjct: 421 ADLNLENCELSCCGVIEFLDTLSMLEKPLKFLSVADNALGSEVAEAVVNSFTISIESLNI 480

Query: 558 EGIGLGPCGFQDLIEGIPEGS-NIVNINISKNRGGIEIATFLLKLLPGASDLVSVNASYN 617
            GIGLGP GF  L   + + S  +++INISKNRGG+E A FL KL+P A  L+S++ASYN
Sbjct: 481 MGIGLGPLGFLALGRKLEKVSKKLLSINISKNRGGLETARFLSKLIPLAPKLISIDASYN 540

Query: 618 LMPVESLSIIRSALKSAKGNLKLLDLGGNNWDGQKAE-DSLFAEFRDGDRKILIDSSSPT 644
           LMP E+L ++  +L++AKG+LK LD+ GN+    +A+  SL  EF+     I +  SS  
Sbjct: 541 LMPPEALLMLCDSLRTAKGDLKRLDMTGNSCISHEADHSSLLHEFQHNGEPIFVLPSSSV 600

[Close]

BLAST of Cp4.1LG12g10320 vs. NCBI nr
Match: gi|659124100|ref|XP_008461989.1| (PREDICTED: protein NLRC3 isoform X1 [Cucumis melo])

HSP 1 Score: 959.1 bits (2478), Expect = 3.8e-276
Identity = 490/604 (81.13%), Postives = 519/604 (85.93%), Query Frame = 1


Query: 78  MAEAPSLLFLCTALVRDEIVRRDDVPPAVYDLPPDLLDTLASQLPPLALQNLQSGMPFEL 137
           MAEAPSLL LC ALV DEIV+RDDVPPA+YDLPPDLLDTLA QLPPLAL NLQSGMPFEL
Sbjct: 1   MAEAPSLLSLCIALVTDEIVQRDDVPPALYDLPPDLLDTLALQLPPLALHNLQSGMPFEL 60

Query: 138 QNEDEYDNDCPKDGRKRRRYCNFNVAWKKNFNLRWSKLTDTIQAVDWQQMYWERHLQSCL 197
           QNEDEYDN C  DGRKRRR  NFN+AWKKNFNLRWSKLTD IQ VDWQQ+YWERHLQSCL
Sbjct: 61  QNEDEYDNGCLVDGRKRRRSSNFNLAWKKNFNLRWSKLTDAIQPVDWQQIYWERHLQSCL 120

Query: 198 DEAAEIASVPSFSKCIGEIEMSDSMLKYIASEGSVHLWCGKYRKLSYHCQQFGCYAQCLS 257
           DEAAEIAS+PSFSKCIGEIEMSDS+LKYIASE S+H W  KYR LSYHCQ+FGCYA CL 
Sbjct: 121 DEAAEIASLPSFSKCIGEIEMSDSILKYIASEKSIHFWRAKYRNLSYHCQEFGCYALCLM 180

Query: 258 LQSILCVSEICHLLRSCRLQTLVLRWIRFQEQVSGLCKLLNQNRETLTSLELIHCKLSSA 317
           LQS+LCVSEICH+LRSC+LQ LVLRWIRF EQV+GLCKLL+QNRETLTSLELIHCKLSS 
Sbjct: 181 LQSVLCVSEICHILRSCKLQKLVLRWIRFPEQVNGLCKLLSQNRETLTSLELIHCKLSST 240

Query: 318 SVNSICDALLHNRKTHGVLHFSINASYFDETDPVALPSGLVSFLSLGRNLYSFKLCENFL 377
           SVNSICDAL+HNRKTHG+LHFSINAS+FDETDPVALPSGLVSF S GR LYSFKLC+N L
Sbjct: 241 SVNSICDALIHNRKTHGILHFSINASHFDETDPVALPSGLVSFFSSGRYLYSFKLCDNDL 300

Query: 378 GKNFGKLVFHTLLDASSCLSDLDLSEN-------NLRKDD-------------------- 437
           GKNFGKLVFHTLLDASSCLS LDLSEN       N  +                      
Sbjct: 301 GKNFGKLVFHTLLDASSCLSALDLSENKMTGWLSNFNRRSLTGLQASSMVGKSLQSLRVL 360

Query: 438 -----------ADNLRYALAHIPNLEFLDISDNPIEDDGIRNLIPYFVEVSERSFPFADL 497
                      ADNLRYAL HIPNLEFLDISDNPIEDDGIRNLIPYF+E SERSFPFADL
Sbjct: 361 SLRGNGLKKDDADNLRYALFHIPNLEFLDISDNPIEDDGIRNLIPYFIEASERSFPFADL 420

Query: 498 NLENCELSCDGVTQLLNVLTTLRKPLRSLSLADNSLGSSVAAALGVFMRKSIQVLNVEGI 557
           NLENCELSCDGVTQLLNVL+TLRKPLRSLS+ADNSLGSSVA ALGVFM KSIQ+LNVEGI
Sbjct: 421 NLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGI 480

Query: 558 GLGPCGFQDLIEGIPEGSNIVNINISKNRGGIEIATFLLKLLPGASDLVSVNASYNLMPV 617
           GLGPCGFQDL+EG+ EGSNIVNINISKNRGGIEIATFLLKLL G SDLVSVNASYNLMPV
Sbjct: 481 GLGPCGFQDLVEGVTEGSNIVNINISKNRGGIEIATFLLKLLSGGSDLVSVNASYNLMPV 540

Query: 618 ESLSIIRSALKSAKGNLKLLDLGGNNWDGQKAEDSLFAEFRDGDRKILIDSSSPTLDGLY 644
           ESL IIRSALK AKG L+LLDL GNNWD QKA+DSL AEF++  +KILI SSSPTLDGLY
Sbjct: 541 ESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILIYSSSPTLDGLY 600

[Close]

BLAST of Cp4.1LG12g10320 vs. NCBI nr
Match: gi|449443929|ref|XP_004139728.1| (PREDICTED: protein NLRC3 isoform X1 [Cucumis sativus])

HSP 1 Score: 934.5 bits (2414), Expect = 1.0e-268
Identity = 479/604 (79.30%), Postives = 515/604 (85.26%), Query Frame = 1


Query: 78  MAEAPSLLFLCTALVRDEIVRRDDVPPAVYDLPPDLLDTLASQLPPLALQNLQSGMPFEL 137
           MAEAPSLL LC ALVRDEI++RDDVPPA+YDLPP LLDTLA +LPPLAL+NLQSGMPFEL
Sbjct: 1   MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGMPFEL 60

Query: 138 QNEDEYDNDCPKDGRKRRRYCNFNVAWKKNFNLRWSKLTDTIQAVDWQQMYWERHLQSCL 197
           QNEDEYDN+C  DGRKRRR  NFN+AWKKNF+LRWSKLTDTIQ VDWQQ+YWE HLQSCL
Sbjct: 61  QNEDEYDNNCLMDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCL 120

Query: 198 DEAAEIASVPSFSKCIGEIEMSDSMLKYIASEGSVHLWCGKYRKLSYHCQQFGCYAQCLS 257
           DEAAEIAS+PSFSKCIGEIEMSDS+LKYIAS+ SVH W  KYR LSYHCQ+FGCYA CL 
Sbjct: 121 DEAAEIASLPSFSKCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQEFGCYALCLR 180

Query: 258 LQSILCVSEICHLLRSCRLQTLVLRWIRFQEQVSGLCKLLNQNRETLTSLELIHCKLSSA 317
           LQS+LCVSEI H+LRSCRLQTL+LRWIRF EQV+GLCKLLNQNRETLTSLELIHCKLSS 
Sbjct: 181 LQSVLCVSEIYHILRSCRLQTLLLRWIRFPEQVNGLCKLLNQNRETLTSLELIHCKLSST 240

Query: 318 SVNSICDALLHNRKTHGVLHFSINASYFDETDPVALPSGLVSFLSLGRNLYSFKLCENFL 377
           SVNSICDAL+HNRKTHG+LHFSIN S FDET+PVALPSGLVSF S GR LYSFKLC+N L
Sbjct: 241 SVNSICDALIHNRKTHGILHFSINGSRFDETEPVALPSGLVSFFSSGRYLYSFKLCDNDL 300

Query: 378 GKNFGKLVFHTLLDASSCLSDLDLSENNL--------RKDDA------------------ 437
           GKNFGK VFHTLLDASSCLS LDLSEN +        R+                     
Sbjct: 301 GKNFGKFVFHTLLDASSCLSVLDLSENKMTGWLSNFNRRSLTGLQASSMVGKSLQSLRVL 360

Query: 438 ------------DNLRYALAHIPNLEFLDISDNPIEDDGIRNLIPYFVEVSERSFPFADL 497
                       DNLRYAL HIPNLEFLD+SDNPIEDDGIRNLIPYF+E SER+ PFADL
Sbjct: 361 NLRGNGLKKDDADNLRYALFHIPNLEFLDMSDNPIEDDGIRNLIPYFIEASERNCPFADL 420

Query: 498 NLENCELSCDGVTQLLNVLTTLRKPLRSLSLADNSLGSSVAAALGVFMRKSIQVLNVEGI 557
           NLENCELSCDGVTQLLNVL+TLRKPLRSLS+ADNSLGSSVA ALGVFM KSIQ+LNVEGI
Sbjct: 421 NLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGI 480

Query: 558 GLGPCGFQDLIEGIPEGSNIVNINISKNRGGIEIATFLLKLLPGASDLVSVNASYNLMPV 617
           GLGPCGFQDL+EG+  GSNIVNINISKNRGGIEIATFLLKLL GASDLVSVNASYNLMPV
Sbjct: 481 GLGPCGFQDLVEGVTAGSNIVNINISKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPV 540

Query: 618 ESLSIIRSALKSAKGNLKLLDLGGNNWDGQKAEDSLFAEFRDGDRKILIDSSSPTLDGLY 644
           ESL IIRSALK AKG L+LLDL GNNWD QKA+DSL AEF++  +KILI SSSP LDGLY
Sbjct: 541 ESLDIIRSALKIAKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILIYSSSPNLDGLY 600

[Close]

BLAST of Cp4.1LG12g10320 vs. NCBI nr
Match: gi|700189322|gb|KGN44555.1| (hypothetical protein Csa_7G330390 [Cucumis sativus])

HSP 1 Score: 816.2 bits (2107), Expect = 4.0e-233
Identity = 419/532 (78.76%), Postives = 449/532 (84.40%), Query Frame = 1


Query: 150 DGRKRRRYCNFNVAWKKNFNLRWSKLTDTIQAVDWQQMYWERHLQSCLDEAAEIASVPSF 209
           DGRKRRR  NFN+AWKKNF+LRWSKLTDTIQ VDWQQ+YWE HLQSCLDEAAEIAS+PSF
Sbjct: 2   DGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCLDEAAEIASLPSF 61

Query: 210 SKCIGEIEMSDSMLKYIASEGSVHLWCGKYRKLSYHCQQFGCYAQCLSLQSILCVSEICH 269
           SKCIGEIEMSDS+LKYIAS+ SVH W  KYR LSYHCQ+FGCYA CL LQS+LCVSEI H
Sbjct: 62  SKCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQEFGCYALCLRLQSVLCVSEIYH 121

Query: 270 LLRSCRLQTLVLRWIRFQEQVSGLCKLLNQNRETLTSLELIHCKLSSASVNSICDALLHN 329
           +LRSCRLQTL+LRWIRF EQV+GLCKLLNQNRETLTSLELIHCKLSS SVNSICDAL+HN
Sbjct: 122 ILRSCRLQTLLLRWIRFPEQVNGLCKLLNQNRETLTSLELIHCKLSSTSVNSICDALIHN 181

Query: 330 RKTHGVLHFSINASYFDETDPVALPSGLVSFLSLGRNLYSFKLCENFLGKNFGKLVFHTL 389
           RKTHG+LHFSIN S FDET+PVALPSGLVSF S GR LYSFKLC+N LGKNFGK VFHTL
Sbjct: 182 RKTHGILHFSINGSRFDETEPVALPSGLVSFFSSGRYLYSFKLCDNDLGKNFGKFVFHTL 241

Query: 390 LDASSCLSDLDLSENNL--------RKDDA------------------------------ 449
           LDASSCLS LDLSEN +        R+                                 
Sbjct: 242 LDASSCLSVLDLSENKMTGWLSNFNRRSLTGLQASSMVGKSLQSLRVLNLRGNGLKKDDA 301

Query: 450 DNLRYALAHIPNLEFLDISDNPIEDDGIRNLIPYFVEVSERSFPFADLNLENCELSCDGV 509
           DNLRYAL HIPNLEFLD+SDNPIEDDGIRNLIPYF+E SER+ PFADLNLENCELSCDGV
Sbjct: 302 DNLRYALFHIPNLEFLDMSDNPIEDDGIRNLIPYFIEASERNCPFADLNLENCELSCDGV 361

Query: 510 TQLLNVLTTLRKPLRSLSLADNSLGSSVAAALGVFMRKSIQVLNVEGIGLGPCGFQDLIE 569
           TQLLNVL+TLRKPLRSLS+ADNSLGSSVA ALGVFM KSIQ+LNVEGIGLGPCGFQDL+E
Sbjct: 362 TQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGIGLGPCGFQDLVE 421

Query: 570 GIPEGSNIVNINISKNRGGIEIATFLLKLLPGASDLVSVNASYNLMPVESLSIIRSALKS 629
           G+  GSNIVNINISKNRGGIEIATFLLKLL GASDLVSVNASYNLMPVESL IIRSALK 
Sbjct: 422 GVTAGSNIVNINISKNRGGIEIATFLLKLLSGASDLVSVNASYNLMPVESLDIIRSALKI 481

Query: 630 AKGNLKLLDLGGNNWDGQKAEDSLFAEFRDGDRKILIDSSSPTLDGLYDGDP 644
           AKG L+LLDL GNNWD QKA+DSL AEF++  +KILI SSSP LDGLYD DP
Sbjct: 482 AKGKLELLDLRGNNWDDQKAQDSLVAEFQNSVKKILIYSSSPNLDGLYDADP 533

[Close]

BLAST of Cp4.1LG12g10320 vs. NCBI nr
Match: gi|659124105|ref|XP_008461991.1| (PREDICTED: leucine-rich repeat-containing protein 16A isoform X2 [Cucumis melo])

HSP 1 Score: 805.1 bits (2078), Expect = 9.1e-230
Identity = 407/505 (80.59%), Postives = 431/505 (85.35%), Query Frame = 1


Query: 78  MAEAPSLLFLCTALVRDEIVRRDDVPPAVYDLPPDLLDTLASQLPPLALQNLQSGMPFEL 137
           MAEAPSLL LC ALV DEIV+RDDVPPA+YDLPPDLLDTLA QLPPLAL NLQSGMPFEL
Sbjct: 1   MAEAPSLLSLCIALVTDEIVQRDDVPPALYDLPPDLLDTLALQLPPLALHNLQSGMPFEL 60

Query: 138 QNEDEYDNDCPKDGRKRRRYCNFNVAWKKNFNLRWSKLTDTIQAVDWQQMYWERHLQSCL 197
           QNEDEYDN C  DGRKRRR  NFN+AWKKNFNLRWSKLTD IQ VDWQQ+YWERHLQSCL
Sbjct: 61  QNEDEYDNGCLVDGRKRRRSSNFNLAWKKNFNLRWSKLTDAIQPVDWQQIYWERHLQSCL 120

Query: 198 DEAAEIASVPSFSKCIGEIEMSDSMLKYIASEGSVHLWCGKYRKLSYHCQQFGCYAQCLS 257
           DEAAEIAS+PSFSKCIGEIEMSDS+LKYIASE S+H W  KYR LSYHCQ+FGCYA CL 
Sbjct: 121 DEAAEIASLPSFSKCIGEIEMSDSILKYIASEKSIHFWRAKYRNLSYHCQEFGCYALCLM 180

Query: 258 LQSILCVSEICHLLRSCRLQTLVLRWIRFQEQVSGLCKLLNQNRETLTSLELIHCKLSSA 317
           LQS+LCVSEICH+LRSC+LQ LVLRWIRF EQV+GLCKLL+QNRETLTSLELIHCKLSS 
Sbjct: 181 LQSVLCVSEICHILRSCKLQKLVLRWIRFPEQVNGLCKLLSQNRETLTSLELIHCKLSST 240

Query: 318 SVNSICDALLHNRKTHGVLHFSINASYFDETDPVALPSGLVSFLSLGRNLYSFKLCENFL 377
           SVNSICDAL+HNRKTHG+LHFSINAS+FDETDPVALPSGLVSF S GR LYSFKLC+N L
Sbjct: 241 SVNSICDALIHNRKTHGILHFSINASHFDETDPVALPSGLVSFFSSGRYLYSFKLCDNDL 300

Query: 378 GKNFGKLVFHTLLDASSCLSDLDLSEN-------NLRKDD-------------------- 437
           GKNFGKLVFHTLLDASSCLS LDLSEN       N  +                      
Sbjct: 301 GKNFGKLVFHTLLDASSCLSALDLSENKMTGWLSNFNRRSLTGLQASSMVGKSLQSLRVL 360

Query: 438 -----------ADNLRYALAHIPNLEFLDISDNPIEDDGIRNLIPYFVEVSERSFPFADL 497
                      ADNLRYAL HIPNLEFLDISDNPIEDDGIRNLIPYF+E SERSFPFADL
Sbjct: 361 SLRGNGLKKDDADNLRYALFHIPNLEFLDISDNPIEDDGIRNLIPYFIEASERSFPFADL 420

Query: 498 NLENCELSCDGVTQLLNVLTTLRKPLRSLSLADNSLGSSVAAALGVFMRKSIQVLNVEGI 545
           NLENCELSCDGVTQLLNVL+TLRKPLRSLS+ADNSLGSSVA ALGVFM KSIQ+LNVEGI
Sbjct: 421 NLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGI 480

[Close]

BLAST of Cp4.1LG12g10320 vs. NCBI nr
Match: gi|778726790|ref|XP_011659160.1| (PREDICTED: NACHT, LRR and PYD domains-containing protein 5 isoform X2 [Cucumis sativus])

HSP 1 Score: 783.1 bits (2021), Expect = 3.7e-223
Identity = 397/505 (78.61%), Postives = 428/505 (84.75%), Query Frame = 1


Query: 78  MAEAPSLLFLCTALVRDEIVRRDDVPPAVYDLPPDLLDTLASQLPPLALQNLQSGMPFEL 137
           MAEAPSLL LC ALVRDEI++RDDVPPA+YDLPP LLDTLA +LPPLAL+NLQSGMPFEL
Sbjct: 1   MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGMPFEL 60

Query: 138 QNEDEYDNDCPKDGRKRRRYCNFNVAWKKNFNLRWSKLTDTIQAVDWQQMYWERHLQSCL 197
           QNEDEYDN+C  DGRKRRR  NFN+AWKKNF+LRWSKLTDTIQ VDWQQ+YWE HLQSCL
Sbjct: 61  QNEDEYDNNCLMDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCL 120

Query: 198 DEAAEIASVPSFSKCIGEIEMSDSMLKYIASEGSVHLWCGKYRKLSYHCQQFGCYAQCLS 257
           DEAAEIAS+PSFSKCIGEIEMSDS+LKYIAS+ SVH W  KYR LSYHCQ+FGCYA CL 
Sbjct: 121 DEAAEIASLPSFSKCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQEFGCYALCLR 180

Query: 258 LQSILCVSEICHLLRSCRLQTLVLRWIRFQEQVSGLCKLLNQNRETLTSLELIHCKLSSA 317
           LQS+LCVSEI H+LRSCRLQTL+LRWIRF EQV+GLCKLLNQNRETLTSLELIHCKLSS 
Sbjct: 181 LQSVLCVSEIYHILRSCRLQTLLLRWIRFPEQVNGLCKLLNQNRETLTSLELIHCKLSST 240

Query: 318 SVNSICDALLHNRKTHGVLHFSINASYFDETDPVALPSGLVSFLSLGRNLYSFKLCENFL 377
           SVNSICDAL+HNRKTHG+LHFSIN S FDET+PVALPSGLVSF S GR LYSFKLC+N L
Sbjct: 241 SVNSICDALIHNRKTHGILHFSINGSRFDETEPVALPSGLVSFFSSGRYLYSFKLCDNDL 300

Query: 378 GKNFGKLVFHTLLDASSCLSDLDLSENNL--------RKDDA------------------ 437
           GKNFGK VFHTLLDASSCLS LDLSEN +        R+                     
Sbjct: 301 GKNFGKFVFHTLLDASSCLSVLDLSENKMTGWLSNFNRRSLTGLQASSMVGKSLQSLRVL 360

Query: 438 ------------DNLRYALAHIPNLEFLDISDNPIEDDGIRNLIPYFVEVSERSFPFADL 497
                       DNLRYAL HIPNLEFLD+SDNPIEDDGIRNLIPYF+E SER+ PFADL
Sbjct: 361 NLRGNGLKKDDADNLRYALFHIPNLEFLDMSDNPIEDDGIRNLIPYFIEASERNCPFADL 420

Query: 498 NLENCELSCDGVTQLLNVLTTLRKPLRSLSLADNSLGSSVAAALGVFMRKSIQVLNVEGI 545
           NLENCELSCDGVTQLLNVL+TLRKPLRSLS+ADNSLGSSVA ALGVFM KSIQ+LNVEGI
Sbjct: 421 NLENCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAGALGVFMGKSIQILNVEGI 480

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g10320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NALP5_BOVIN	4.5e-11	30.14	NACHT, LRR and PYD domains-containing protein 5 OS=Bos taurus GN=NLRP5 PE=2 SV=1	[more]
RINI_PIG	6.8e-07	26.27	Ribonuclease inhibitor OS=Sus scrofa GN=RNH1 PE=1 SV=1	[more]
CARL1_HUMAN	8.8e-07	25.40	F-actin-uncapping protein LRRC16A OS=Homo sapiens GN=LRRC16A PE=1 SV=1	[more]

BLAST of Cp4.1LG12g10320 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4G5_CUCSA	2.8e-233	78.76	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G330390 PE=4 SV=1	[more]
M5VNW6_PRUPE	1.9e-178	56.46	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003067mg PE=4 SV=1	[more]
A0A061DW66_THECC	4.4e-162	53.81	RNI-like superfamily protein, putative OS=Theobroma cacao GN=TCM_003751 PE=4 SV=...	[more]
A0A0D2SDK3_GOSRA	7.7e-159	52.31	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G151600 PE=4 SV=1	[more]
V4VUJ0_9ROSI	1.0e-155	53.23	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019392mg PE=4 SV=1	[more]

BLAST of Cp4.1LG12g10320 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20210.1	7.9e-131	45.98	RNI-like superfamily protein	[more]

BLAST of Cp4.1LG12g10320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659124100\|ref\|XP_008461989.1\|	3.8e-276	81.13	PREDICTED: protein NLRC3 isoform X1 [Cucumis melo]	[more]
gi\|449443929\|ref\|XP_004139728.1\|	1.0e-268	79.30	PREDICTED: protein NLRC3 isoform X1 [Cucumis sativus]	[more]
gi\|700189322\|gb\|KGN44555.1\|	4.0e-233	78.76	hypothetical protein Csa_7G330390 [Cucumis sativus]	[more]
gi\|659124105\|ref\|XP_008461991.1\|	9.1e-230	80.59	PREDICTED: leucine-rich repeat-containing protein 16A isoform X2 [Cucumis melo]	[more]
gi\|778726790\|ref\|XP_011659160.1\|	3.7e-223	78.61	PREDICTED: NACHT, LRR and PYD domains-containing protein 5 isoform X2 [Cucumis s...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g10320.1	Cp4.1LG12g10320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR24106	FAMILY NOT NAMED	coord: 391..607 score: 5.1E-135coord: 152..202 score: 5.1E-135coord: 267..326 score: 5.1E
None	No IPR available	PANTHER	PTHR24106:SF146	RNI-LIKE SUPERFAMILY PROTEIN	coord: 152..202 score: 5.1E-135coord: 391..607 score: 5.1E-135coord: 267..326 score: 5.1E
None	No IPR available	SMART	SM00368	LRR_RI_2	coord: 508..535 score: 57.0coord: 453..480 score: 15.0coord: 421..448 score: 98.0coord: 393..420 score: 41.0coord: 301..328 score:
None	No IPR available	unknown	SSF52047	RNI-like	coord: 255..609 score: 2.62

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG12g10320	CmaCh17G013560	Cucurbita maxima (Rimu)	cmacpeB371
Cp4.1LG12g10320	CmoCh17G013160	Cucurbita moschata (Rifu)	cmocpeB335
Cp4.1LG12g10320	Carg11527	Silver-seed gourd	carcpeB0018

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG12g10320	Cucurbita pepo (Zucchini)	cpecpeB170
Cp4.1LG12g10320	Cucurbita maxima (Rimu)	cmacpeB905
Cp4.1LG12g10320	Cucurbita moschata (Rifu)	cmocpeB841
Cp4.1LG12g10320	Silver-seed gourd	carcpeB0122