Cp4.1LG12g10210 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g10210
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial
Location	Cp4.1LG12 : 9595848 .. 9603382 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACATTGAGGCCCGCTTAAAATGACAAAACCCAAGATCCAATAGTGGAAGCCTGTTCGTGTTCATCAAAATTCCTCACCCTGTTAACAGAAGATCTTCTCTCTTCCCCCGTCCCTCACTCCGGCAAGATTCTGATCAAAGATGCAGGCCATTTCAAGGCGTCTAGCGCAGCAGCAGAGTCTCAACTCTCCTTCCTCAATTGCTTCTCTCAAGTTCATATACCCTCTTTCTCATCACTGTAATCCCTCATTCCCCTCTGCCGTTCTCTTCCTTGCGCGATTCCACTTCGCCTTGATTTCTTATTTTTTCTGTTTTCCTTTTCCAGATTGTGGGGCTGATCGTCCACGATATGAATCCACCTTGGCTACGAGGGGAGTCGGGCACCTTGTCCGCAAGGGCACTGGTGGGAGATCGTCCGTTAGGTAATCTAGCCCTATATTTTTCGTGTTTGAATTATTCTATTTGATCGTCCGCCTAATGTCCGACAAGAATGCTGGATTTTGAGTGCTTTGGAATTGTGTGGGAATTTAAGAAATTTAATGTAATGAACAGTGGTGCAATGGAATGTCAATATAATCTTTCAGCCGATATTGAACGGAAATACTTTTTCCTTTTACTTTCTTTTCTCATTGTCATTAATCGCTCGATTCATCTACAGATAAAGGTAAGCGTCTGTTAAATATACTTTTTTTTTTATCGAGTAATTTAGAAGATCATGGTAGTACTCACTACGATCATTCTGGCGTCACCCCAGCTTCTATGGGATAATGAAGCGGGCAGCCTTATTCTGAGGTTTCCCTGTCGCTGTCAAGATAATCCTAGAATGTGCTTATCTGTTCTCCTTAAGCATACACATTAGGATTTTCAGGCAGATCCGGTTATTGATATTTAACTCGATTTGGGTTCTAGTTTTTAGTTACGAAACGAAATTCTGTCTCTGAATTTTCTGATTTTACTGTCTCATCACAATGATTTTTTGCAGTGGGATCGTGGCTACTGTCTTTGGAGCTACTGGATTCCTTGGCCGTTATGTTGTACAGCAATTAGGTAATAGGCGAGCATAAATGATGCTAGCGCTGGGTTTTCGTTTTGCCTAAATATGCCATTTACTTTTAAATGGTTCTGGTAGTGGGTTTGGAAGCATTGGCTCTATTATTTATTATCTATCAATTTTATGCTAAGCATTGTTTTGGAAATGAATTTTGTTTCAGCTAAAATGGGGTCCCAAGTGTTGGTCCCTTTTCGAGGTTCTGAAGATTCACCTCGTCATCTCAAATTAATGGGAGATTTGGGACAGGTAGAGTAGTATACGATGTTGCGATGCCATGGATGATAGCCCTATATCTTTTTTCCTTGTGCTGCTGAATGATTTCGTTACCCCCTCAAAGTTAATTCATTTACCTTTACTTTTCTTTTTTTCTTTTTTGTTTTCAGATAGTGCCAATGAAATACAACCCAAGAGATGAAAGTTCTATAAAAGCTGTCATGGCAAAGGCTAATGTGGTCCTTAATCTTATTGGTATGGGCTTCCCATTTTTCACCCTTCTTGTGAANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAGCCTTTTTAATATTCGACATTAACAACTTTGTTGACAGGAAGAGAGTATGAAACAAGAAATTACAGCTTTGAGGAAGTGAATCATTCCATGGCAGAACAACTTGCCACGGTATGCATCTGTACTTGAATGCCATGTTTCTAAATTGTCAAAAAATTGGTATGTGATTAATTGTTGCTCTTCTTAGAAGGGATTTTTTTTCCTGTTTTTTCTTATGAAAGTTACCTTCTTTCAGCTGTTCTATTCGCAGCTTCTATGTCTTTGTTTGGCTTGTGTGTTTTCATATGCCCTTCTGATACTATCGGGAAAGTGATTCTTATTACAAAAAACAAGGATTACAAAATTGGCGGGCAGGCTAAAAGCATCATAGAAGTAAAGTAGCTAGGGGAAGGGAGGGAATATATGATTTTTAAATCTCCCCTCAACTCAAAATCTTAAGTTGATGGTTTATGGAAAATTAAATCATATAGTTACTTCAACTTTCCCCCTTATTTGTGTACTTGAAAATTTGTAGAAAGCCAACAAGTGGAAATTAATATTAATTGGGGAGGAAATGGCATTTGAACATATGACCTCCTACTCTGATACACTTTAGTTACCAACATACAAAATTGGAATAGAAACAATTCCATTGATGAGATGGAATAATTGTTTTGATTATAAACAAATTCAAAATTTTTATAGATGAAGGTGCAATTTTAAACAACATAGTATTATTGTGAATAATATGATAATGAATCAATTTAAGAAATTGGAGCTTTCGTAGGAGAGTGGGGAGAGAAATGAGTACTGTTTTATGCCTAATTCGTAGTTAATTCAATAAAATGAAATAAGCTATTTTAGAAAGGGCTTCAAGCGCAGAGGGAATGCACTTGCATTGAGGCACTTTTTAAAACACTGGCCTATATCTGATCTTTGTTTTCCACATTATGATACTGCTGCAAATATCAGTTATAAAGGCAAGATAAACACAAAAAGTGTTAAGAGTAGTTGCGTATATTAAGTTGAAGTATAATCTTCTGGAAGCATGTTGCATATGCAGCATATAACTCAGGTATGCTGCAACTTCATGATAGTTTCCTTTGATTCTAATTGAAATATGAACTTTCTTCTTTAGGTAGGAAAAGGAATAAATCATGAATGTGCTTTCAGTGTTTTTCTTTTTGAAGCTAGAAAGTAGTAAAAAATCAAGTTATGATTCCTCTTTATTTTTGGTCTCTAAGGAAGTTTACCACCCTCGTTTCTTTTCGAGTCTGATGTAGATTAGGTCTTTGCCCTCCATTTCAATATTGTAGATTGCCAAAGAACACGGTGGTATCTTGAGGTTCATACAAGTTTCTTGCCTAGGGGCATCTTCATCATCTCCATCCAGATTTCTGAGGGCTAAAGCTGCTGCTGAGGAATCTGTTTTAAAGGCATTCCCTGAGGTAAACAGTTACCATCTGTTTCCTGATTTTGAGTTGATAATGCCACATGAAGTAACGTATCTGAAAATATAGTTTTTTTTTTCTTCTAATGGTAGTTTTCTTTTATTAGAGAATCTTACAAATTTTGATTTTTCTATAGCTGCTTATTTATCATGGATTTATCTTTTATTCTTATGGGAGTAATTGTCTATGAAGATTGAGGTTAGGGGTGTACATGGGTTGGGTTGGATTGAGGGGATTTTTTGGACCAACTCAAAAGTTCGGGTTGGTTGAATTGGTAATCCAACCCAACCCGAAATTGATTCACAACCCAGTCCTCTATTTTCAAGTTGAATGATTAAAACTTTTAGTTAGTGCAATGGATTCATAACTAATTTGAACTAAAAGTTGTGATATTGTCCCTAAAACAATTACCACCTATAAACTTTTAGTTTAAAAGTACTAAACTAAAATTTTCACCTTTGAACATACAATGGATATGCAATGAATCAATTCCAACGACACCTACATATAATTAATTATTCACATTCACAATATATAATCATTCAACATAAGACCTAAAAATTTAGTTTTTGTAAAAGTGCAAGTAGTTAATCTTTACAAACTTGAGCACAAACTTTAAGAGCACGAACTTGAACCTGCCCAGTATATAAAATAATAAAAATAACTAGTTTATATCATGCATAACAGAAAAAGAAAACTATTATTAAAATATTTTACTTACATTGAAAGAGAACTATTTGTGCATGACACTGGTGGAGCTGGAGGGCATTAAATCACCTGAAAAATTAGAAAAATATAAGTTGTGATAGAACAATATAGATTGCAACAAATAGATAATAAATAAGTTAGAGTTACTTGTCTCGATCCACGTCATTCTTTAACTCTAATGAATTTTGCTTTTGTATTGTGATAAATACTCAAAATGTATCTAGCCAAGGGACATGAGCTGAAAAGGTGACCTTTGAGTTTCTGCCACATTTTTGCACAGGGGACAACTTGTTAATCTAGCTAATAGCACAACAATATTTCTTCAAGAAATGTTAAGAGATTTTTAATATATTTTTAATTGCAACTTTTCTCCATTTATTTAGTGGTTAGTGTGGGAGCTGATGTTTCTAAAATATGCTTTTACAGGCAACAATTCTGAGACCTGCAGGTATGATTGGTACAGAGGACCGTATTATGAATACATGGGCACATTTTGCTAAAAAATATGGCTTTGTTCCCCTCTTTGGAGATGGATCTACAAAGTATGTATTTCATAACCACCAGCGCATTCTTTGCATTCTTTGCAGAATTTTCTGATTGTTATCCTTCCTAACCACCAGCGCATTCTTTGCAGAATCCAACCTGTGTATGTTGTTGATGTTGCTGCTGGAGCTGTTTCAGCCTTGACAGATGATGGAACCAGCATTGGAAAAGTTTATGAACTAGGTGGTCCAGAGATCTTTACGGTCCATGACTTGGTATGTTACCTTTTTCGAATATCCTTCCTGCTCTCCCCTAAAGAAAAAAAGAAAAGAGGTTTCCTTTTAAAGCTTCATGTTCTATGCAGGCAGAAATTATGTTCGACATGATCCGTGAATGGCCTCGCTATGTGAAAGTCCCTTTCCCTATTGCAAAGGTAAAATCAGTAGAAGTTGATGATGATGTGCCATGTTGTATATATGCTTTTCCTCAAGTTCTTTTTATATTCCCACTGTATTCCTTCTTTTATTGGTTGCTGTTATGCATCACGAATCCTTCGTTTTGTTGATTCATATTTGTTACTTGTTTCCTTTTTCCCCGTAATAATTGCATAATTTGCACTATGCTAGATGATTTTTTTAGTGATGTAAATAAGTCTTGGTGTACTTTGGAGTTTTACTTTCTTATGCATAGCACAGCATGATGATCGCTGTTTTTCTTGAATCAAGAATGAAGTTTCTCTGGAAATAATCTTTTGTATCCAATTTGGATAGGATATTCTTCTTTTATAGCCTTAAAAATTGAACCTTTTGAAATCATCTTTTGTATGCGGTTTTAATGTGGATCCTATGCGGTTACTGCAGGGGTTAGAACGGTAGCTATTATCAATGTTAAGAAGAAAATAAGTGGCGTTTATTTATTAATGAAACTGCAGTCTGATGATAACAGAGATCGTCATTTGTGTAGGTTAAATGGTGATTTATTTCTAGAACCCATTGATGCATATAATTTAAACTTGTTAATTGGTAATTTGAAGACTACTCTTCTGATATTAATGCATTAGTATAATTGTATAGAACAAATTAAACCTAGGAAAGTGTAAGTTGCTCATTGAGATGTAACATGACTCCCCCCCCTGTGATCCTTGCTGTTGATGTTGTTTAAAAAACTAAAAGCTGCTGTTTGGCTTCAGGCAATTTCTACTCCCCGCGAGATTCTACTGAACAAAGTCCCGTTTCCATTGCCAACGCCATCCATTTTCAATCTGGATCAGATCCTAGCTCTAACACAAGATACAGTTGTTTCTGAAAATGGTATGCATACCCCTCGTTAATTTTGCTCTGCCAATAAGTCGAGATGTTCCCTAATACCCTTTGATCTTGCAATTGGATTTGCAGCATTGACATTCAATGACCTTGGGATTGCACCACATAAGTTGAAGGGATATCCTGTCGAGTTTCTTATATCGTACCGTAAAGGTGGCCCGCAATTCGGTTCGACAGTCAGTGAAAAAGTCGATCCTGATTCTTTTCCAGGCTTCTCGAGATAATTTGTATTAACTTAGTTGAAAAGGTTTGAGAACCGCCTGGTTTATGTCTCCATTTGATCAACAAATAAAATGGAGAATGTTTTTGAATTCAACCCTCGTGTATCCTAATCTTCTTGATTCATGGTTTAGAATTCACAGTTTATTTGGTGTTGTAATTAATAAAGGCTGGGATGCTTGGCTACAGCATAATACTATGATCATAAAATGTGTTTTTTCAGGAAAAAGAAAAGAACAGAAATGGGAAGAAGCCCAGGAGTTTTGTTTTTCTTTGGAACCAAACTAACACATCACTTCATCAAATTCCCCAGCTATGAAGTAGTAATCGGCTATATAGTACGGTGGTTAGAATCTCATTGCTATCTTTACTGTCTTTTATGTTACTCTTATAGCTTTATTAGTCTATATGCTTCTAAAAATATCGTTACCGTTGTATATACTACATTGTTTCAAAAATACTCGAATTACCTTCAATTGAGAAAGATCCAATTTTGAAACAAAGAATCATATGGGTACTCTTATGTTTCTCCAATTTGTCCCATTTTTACACCGATTTTGAAACATGAAGTAGCATAAAATCCGAAGTTCCAAAATCAAGATCTCCCAAGTTCTTAGTGTCTCTTTTTGAGCATTAAACTCAACCATGCTAACTCCCAAGATCCCTTCGTGGGTTTTATTATCCTTTCCTGTATACTTTGAATGAGTTGAATGAGTAAGAAATGGAATGTTGGAAAGTTGAAGACTTAGGTTTGTTGAAGAAGAAGGCATAGATTCCAACGAATTCTTCATCCATCAGCATCAACACAGTGTTGATCGTGATTCAACGCAGAACAAAATTGGGCAAAAACAGGTCAATCTAATCACAGAACAGACAATGAGAAGCAGAAACCGTACTAGGCGATTTTCATTTCTTGACGAATTGCAAGCCATTGGCGTTGGAGTATCGCTCCATGAATCTCATGAACCTGTCCCACTCCCTCGGAGTCCGCATCACGTACTTGGCCTCGATTCCCGCAGGTTTTCCATTAATGAACTTGGCGTTCACATCCACCGACTGAATCACACCTTCCTCATCGATCATGTAGAATCCGGTAATGTCCCCGACCTCCCCCGACGAGTCGAACACCGACGGCTGCTCGAACTTGAAAATGGCCATTCCGTTGGTGCCGTCTCGGGATTTGGTCAGCCTCACGTCCGGCACCGTCTGCTCGTCCGTGCCCTGGATGAACTGGATCTTCGGCAGAACCATGAGGATCGTATTGGACGGCCGTCCGTGGGGTTGACATCTGCGGCGAGTGACCGTCTGGCATTTTCCGCCAGAGACGTTAAGGGAACGGCCGTGGAATGCGGAGAAGACGCTGCTGTGGAGTCTGGCGGAGGCAAAAGCTGCTGAAGAAGAGTGAGTTTGGTGATGATGATGAGAATTAGGGTTGGGGAAAGGGGAATGCAGAGAGTGATAGAGTTACCTTTGGTGTTGGTGGATGAAGAATGATGCAGATGGGGAGAAGAAAGGGAAGTGGATGCGAGAGATTGCAGAGTCGCCATTGATTTTGAAACGCAGCCAGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAAAAGGCAAAAGGAAGGGGAGAATGGTGTGGTGTGAAGATTGGTAAGGTGTGTAACCACGAGAGCCATTCACTTCCATTTCAATCCCTTCCTCACCACCCTTACTCTCTCTACTAACTATTAATTTTGTGCCTATAAATCTTTTTTTTTTTTTTTTTTAAATATCT

mRNA sequence

CACATTGAGGCCCGCTTAAAATGACAAAACCCAAGATCCAATAGTGGAAGCCTGTTCGTGTTCATCAAAATTCCTCACCCTGTTAACAGAAGATCTTCTCTCTTCCCCCGTCCCTCACTCCGGCAAGATTCTGATCAAAGATGCAGGCCATTTCAAGGCGTCTAGCGCAGCAGCAGAGTCTCAACTCTCCTTCCTCAATTGCTTCTCTCAAGTTCATATACCCTCTTTCTCATCACTATTGTGGGGCTGATCGTCCACGATATGAATCCACCTTGGCTACGAGGGGAGTCGGGCACCTTGTCCGCAAGGGCACTGGTGGGAGATCGTCCGTTAGTGGGATCGTGGCTACTGTCTTTGGAGCTACTGGATTCCTTGGCCGTTATGTTGTACAGCAATTAGCTAAAATGGGGTCCCAAGTGTTGGTCCCTTTTCGAGGTTCTGAAGATTCACCTCGTCATCTCAAATTAATGGGAGATTTGGGACAGATTGCCAAAGAACACGGTGGTATCTTGAGGTTCATACAAGTTTCTTGCCTAGGGGCATCTTCATCATCTCCATCCAGATTTCTGAGGGCTAAAGCTGCTGCTGAGGAATCTGTTTTAAAGGCATTCCCTGAGGCAACAATTCTGAGACCTGCAGGTATGATTGGTACAGAGGACCGTATTATGAATACATGGGCACATTTTGCTAAAAAATATGGCTTTGTTCCCCTCTTTGGAGATGGATCTACAAAAATCCAACCTGTGTATGTTGTTGATGTTGCTGCTGGAGCTGTTTCAGCCTTGACAGATGATGGAACCAGCATTGGAAAAGTTTATGAACTAGGTGGTCCAGAGATCTTTACGGTCCATGACTTGGCAGAAATTATGTTCGACATGATCCGTGAATGGCCTCGCTATGTGAAAGTCCCTTTCCCTATTGCAAAGGCAATTTCTACTCCCCGCGAGATTCTACTGAACAAAGTCCCGTTTCCATTGCCAACGCCATCCATTTTCAATCTGGATCAGATCCTAGCTCTAACACAAGATACAGTTGTTTCTGAAAATGCATTGACATTCAATGACCTTGGGATTGCACCACATAAGTTGAAGGGATATCCTGTCGAGTTTCTTATATCGTACCGTAAAGGTGGCCCGCAATTCGGTTCGACAGTCAGTGAAAAAGTCGATCCTGATTCTTTTCCAGGCTTCTCGAGATAATTTGTATTAACTTAGTTGAAAAGGTTTGAGAACCGCCTGGTTTATGTCTCCATTTGATCAACAAATAAAATGGAGAATGTTTTTGAATTCAACCCTCGTGTATCCTAATCTTCTTGATTCATGGTTTAGAATTCACAGTTTATTTGGTGTTGTAATTAATAAAGGCTGGGATGCTTGGCTACAGCATAATACTATGATCATAAAATGTGTTTTTTCAGGAAAAAGAAAAGAACAGAAATGGGAAGAAGCCCAGGAGTTTTGTTTTTCTTTGGAACCAAACTAACACATCACTTCATCAAATTCCCCAGCTATGAAGTAGTAATCGGCTATATAGTACGGTGGTTAGAATCTCATTGCTATCTTTACTGTCTTTTATGTTACTCTTATAGCTTTATTAGTCTATATGCTTCTAAAAATATCGTTACCGTTGTATATACTACATTGTTTCAAAAATACTCGAATTACCTTCAATTGAGAAAGATCCAATTTTGAAACAAAGAATCATATGGGTACTCTTATGTTTCTCCAATTTGTCCCATTTTTACACCGATTTTGAAACATGAAGTAGCATAAAATCCGAAGTTCCAAAATCAAGATCTCCCAAGTTCTTAGTGTCTCTTTTTGAGCATTAAACTCAACCATGCTAACTCCCAAGATCCCTTCGTGGGTTTTATTATCCTTTCCTGTATACTTTGAATGAGTTGAATGAGTAAGAAATGGAATGTTGGAAAGTTGAAGACTTAGGTTTGTTGAAGAAGAAGGCATAGATTCCAACGAATTCTTCATCCATCAGCATCAACACAGTGTTGATCGTGATTCAACGCAGAACAAAATTGGGCAAAAACAGGTCAATCTAATCACAGAACAGACAATGAGAAGCAGAAACCGTACTAGGCGATTTTCATTTCTTGACGAATTGCAAGCCATTGGCGTTGGAGTATCGCTCCATGAATCTCATGAACCTGTCCCACTCCCTCGGAGTCCGCATCACGTACTTGGCCTCGATTCCCGCAGGTTTTCCATTAATGAACTTGGCGTTCACATCCACCGACTGAATCACACCTTCCTCATCGATCATGTAGAATCCGGTAATGTCCCCGACCTCCCCCGACGAGTCGAACACCGACGGCTGCTCGAACTTGAAAATGGCCATTCCGTTGGTGCCGTCTCGGGATTTGGTCAGCCTCACGTCCGGCACCGTCTGCTCGTCCGTGCCCTGGATGAACTGGATCTTCGGCAGAACCATGAGGATCGTATTGGACGGCCGTCCGTGGGGTTGACATCTGCGGCGAGTGACCGTCTGGCATTTTCCGCCAGAGACGTTAAGGGAACGGCCGTGGAATGCGGAGAAGACGCTGCTGTGGAGTCTGGCGGAGGCAAAAGCTGCTGAAGAAGAGTGAGTTTGGTGATGATGATGAGAATTAGGGTTGGGGAAAGGGGAATGCAGAGAGTGATAGAGTTACCTTTGGTGTTGGTGGATGAAGAATGATGCAGATGGGGAGAAGAAAGGGAAGTGGATGCGAGAGATTGCAGAGTCGCCATTGATTTTGAAACGCAGCCAGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAAAAGGCAAAAGGAAGGGGAGAATGGTGTGGTGTGAAGATTGGTAAGGTGTGTAACCACGAGAGCCATTCACTTCCATTTCAATCCCTTCCTCACCACCCTTACTCTCTCTACTAACTATTAATTTTGTGCCTATAAATCTTTTTTTTTTTTTTTTTTAAATATCT

Coding sequence (CDS)

ATGCAGGCCATTTCAAGGCGTCTAGCGCAGCAGCAGAGTCTCAACTCTCCTTCCTCAATTGCTTCTCTCAAGTTCATATACCCTCTTTCTCATCACTATTGTGGGGCTGATCGTCCACGATATGAATCCACCTTGGCTACGAGGGGAGTCGGGCACCTTGTCCGCAAGGGCACTGGTGGGAGATCGTCCGTTAGTGGGATCGTGGCTACTGTCTTTGGAGCTACTGGATTCCTTGGCCGTTATGTTGTACAGCAATTAGCTAAAATGGGGTCCCAAGTGTTGGTCCCTTTTCGAGGTTCTGAAGATTCACCTCGTCATCTCAAATTAATGGGAGATTTGGGACAGATTGCCAAAGAACACGGTGGTATCTTGAGGTTCATACAAGTTTCTTGCCTAGGGGCATCTTCATCATCTCCATCCAGATTTCTGAGGGCTAAAGCTGCTGCTGAGGAATCTGTTTTAAAGGCATTCCCTGAGGCAACAATTCTGAGACCTGCAGGTATGATTGGTACAGAGGACCGTATTATGAATACATGGGCACATTTTGCTAAAAAATATGGCTTTGTTCCCCTCTTTGGAGATGGATCTACAAAAATCCAACCTGTGTATGTTGTTGATGTTGCTGCTGGAGCTGTTTCAGCCTTGACAGATGATGGAACCAGCATTGGAAAAGTTTATGAACTAGGTGGTCCAGAGATCTTTACGGTCCATGACTTGGCAGAAATTATGTTCGACATGATCCGTGAATGGCCTCGCTATGTGAAAGTCCCTTTCCCTATTGCAAAGGCAATTTCTACTCCCCGCGAGATTCTACTGAACAAAGTCCCGTTTCCATTGCCAACGCCATCCATTTTCAATCTGGATCAGATCCTAGCTCTAACACAAGATACAGTTGTTTCTGAAAATGCATTGACATTCAATGACCTTGGGATTGCACCACATAAGTTGAAGGGATATCCTGTCGAGTTTCTTATATCGTACCGTAAAGGTGGCCCGCAATTCGGTTCGACAGTCAGTGAAAAAGTCGATCCTGATTCTTTTCCAGGCTTCTCGAGATAA

Protein sequence

MQAISRRLAQQQSLNSPSSIASLKFIYPLSHHYCGADRPRYESTLATRGVGHLVRKGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSPRHLKLMGDLGQIAKEHGGILRFIQVSCLGASSSSPSRFLRAKAAAEESVLKAFPEATILRPAGMIGTEDRIMNTWAHFAKKYGFVPLFGDGSTKIQPVYVVDVAAGAVSALTDDGTSIGKVYELGGPEIFTVHDLAEIMFDMIREWPRYVKVPFPIAKAISTPREILLNKVPFPLPTPSIFNLDQILALTQDTVVSENALTFNDLGIAPHKLKGYPVEFLISYRKGGPQFGSTVSEKVDPDSFPGFSR

Homology

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BLAST of Cp4.1LG12g10210 vs. Swiss-Prot
Match: NDUA9_ARATH (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Arabidopsis thaliana GN=At2g20360 PE=1 SV=2)

HSP 1 Score: 374.8 bits (961), Expect = 1.0e-102
Identity = 179/248 (72.18%), Postives = 209/248 (84.27%), Query Frame = 1


Query: 101 EDSPRHLKLMGDLGQIAKEHGGILRFIQVSCLGASSSSPSRFLRAKAAAEESVLKAFPEA 160
           ED+  H+     L  +AKEHGGI+R+IQVSCLGAS SSPSR LRAKAAAEE+VL A PEA
Sbjct: 157 EDANHHIA--EKLALVAKEHGGIMRYIQVSCLGASVSSPSRMLRAKAAAEEAVLNALPEA 216

Query: 161 TILRPAGMIGTEDRIMNTWAHFAKKYGFVPLFGDGSTKIQPVYVVDVAAGAVSALTDDGT 220
           TI+RPA MIGTEDRI+N W+ F KKYGF+PL G G+TK QPVYVVDVAA  V+AL DDG+
Sbjct: 217 TIMRPATMIGTEDRILNPWSMFVKKYGFLPLIGGGTTKFQPVYVVDVAAAIVAALKDDGS 276

Query: 221 SIGKVYELGGPEIFTVHDLAEIMFDMIREWPRYVKVPFPIAKAISTPREILLNKVPFPLP 280
           S+GK YELGGP++FT H+LAEIM+DMIREWPRYVK+PFPIAKA++ PR+ ++NKVPFPLP
Sbjct: 277 SMGKTYELGGPDVFTTHELAEIMYDMIREWPRYVKLPFPIAKAMAAPRDFMVNKVPFPLP 336

Query: 281 TPSIFNLDQILALTQDTVVSENALTFNDLGIAPHKLKGYPVEFLISYRKGGPQFGSTVSE 340
           +P IFNLDQI ALT DT+VS+NAL F DL + PHKLKGYPVEFLI YRKGGP FGSTVSE
Sbjct: 337 SPQIFNLDQINALTTDTLVSDNALKFQDLDLVPHKLKGYPVEFLIQYRKGGPNFGSTVSE 396

Query: 341 KVDPDSFP 349
           K+  D +P
Sbjct: 397 KIPTDFYP 402

[Close]

BLAST of Cp4.1LG12g10210 vs. Swiss-Prot
Match: CCB12_ORYSJ (Cyclin-B1-2 OS=Oryza sativa subsp. japonica GN=CYCB1-2 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.1e-38
Identity = 87/153 (56.86%), Postives = 110/153 (71.90%), Query Frame = 1


Query: 115 QIAKEHGGILRFIQVSCLGASSSSPSRFLRAKAAAEESVLKAFPEATILRPAGMIGTEDR 174
           +++KEHGG +RFIQVSCLGAS+SS SR LRAKAA EESVLK FPE     P  ++ +  +
Sbjct: 255 KVSKEHGGFMRFIQVSCLGASASS-SRMLRAKAAGEESVLKEFPE-----PLRLLISHRQ 314

Query: 175 IMNTWAHFAKKYGFVPLFGDGSTKIQPVYVVDVAAGAVSALTDDGTSIGKVYELGGPEIF 234
            M T               +  ++IQPVYVVDVAA  V++L DDGTS+GK Y LGGPEI+
Sbjct: 315 SMGT------------CILNFHSRIQPVYVVDVAAAIVNSLKDDGTSMGKSYGLGGPEIY 374

Query: 235 TVHDLAEIMFDMIREWPRYVKVPFPIAKAISTP 268
           TVHDLAE+M++ I EWPRY+ VP PIA+AI++P
Sbjct: 375 TVHDLAELMYETICEWPRYIDVPLPIARAIASP 389

[Close]

BLAST of Cp4.1LG12g10210 vs. Swiss-Prot
Match: NDUA9_NEUCR (NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo40 PE=1 SV=2)

HSP 1 Score: 132.1 bits (331), Expect = 1.2e-29
Identity = 110/344 (31.98%), Postives = 154/344 (44.77%), Query Frame = 1


Query: 35  GADRPRYESTLATRGVGHLVRKGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVL 94
           G  R        TR  G  + +  GGRSS+ G  ATVFGATG LGRY+V +LA+ G  V+
Sbjct: 21  GFQRRAISDVTITR-TGKPIIRNQGGRSSLGGHTATVFGATGQLGRYIVNRLARQGCTVV 80

Query: 95  VPFR----------------------------GSEDSPRHLKLMGDL------------- 154
           +PFR                              E+S RH  ++ +L             
Sbjct: 81  IPFRDEYNKRHLKVTGDLGKVVMIEFDLRNTQSIEESVRHSDVVYNLIGRDYPTKNFSFE 140

Query: 155 -------GQIAKEHG--GILRFIQVSCLGASSSSPSRFLRAKAAAEESVLKAFPEATILR 214
                   +IA+      + RFI VS   A  +S   F   KA  E+ V   FPE TI+R
Sbjct: 141 DVHIEGAERIAEAVAKYDVDRFIHVSSYNADPNSECEFFATKARGEQVVRSIFPETTIVR 200

Query: 215 PAGMIGTEDRIMNTWAHFAKKYGFVPLFGDGSTKIQPVYVVDVAAGAVSALTDDGTSIGK 274
           PA M G EDR+++  A        +        K  PV+V+DV       L DD T+  +
Sbjct: 201 PAPMFGFEDRLLHKLASVKN----ILTSNGMQEKYNPVHVIDVGQALEQMLWDDNTA-SE 260

Query: 275 VYELGGPEIFTVHDLAEIMFDMIREWPRYVKVPFPIAKAISTPREILLNKVPFPLPTPSI 329
            +EL GP+ +T  +++E++   I +  R+V VP  I K I+     +LNK    L  P I
Sbjct: 261 TFELYGPKTYTTAEISEMVDREIYKRRRHVNVPKKILKPIAG----VLNKA---LWWP-I 320

[Close]

BLAST of Cp4.1LG12g10210 vs. Swiss-Prot
Match: NDUA9_DICDI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Dictyostelium discoideum GN=ndufa9 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.1e-22
Identity = 77/248 (31.05%), Postives = 123/248 (49.60%), Query Frame = 1


Query: 91  SQVLVPFRGSEDSPRHLKL----MGDLGQIAKEHGGILRFIQVSCLGASSSSPSRFLRAK 150
           S +++   G +   R+  L    +    +IA     + ++I VS L AS  SPS F R+K
Sbjct: 109 SNIVINMAGRDYETRNFSLDDINVHAASRIADLSKNVEKYIHVSTLRASEDSPSHFSRSK 168

Query: 151 AAAEESVLKAFPEATILRPAGMIGTEDRIMNTWAHFAKKYGFVPLFGDGSTKIQPVYVVD 210
           A  E+   +  P  T++RP+ + G ED+ +N W+  ++ + F+P +     KIQP++  D
Sbjct: 169 AIGEKLTREIIPNCTVVRPSIIFGDEDKFINKWSKVSQNWPFIPRYNQ-QHKIQPLHCYD 228

Query: 211 VAAGAVSALTDDGTSIGKVYELGGPEIFTVHDLAEIMFDMIREWPRYVKVPFPIA----K 270
           +A+G +S L   GTS GKVYE  G E+FT  +  +++ D   +   Y K+  P++    K
Sbjct: 229 LASGILSILETPGTS-GKVYEFAGDEVFTWDEFLDMIIDGTAQ---YSKLNIPVSNDFMK 288

Query: 271 AISTPREILLNKVPFPLPTPSIFNLDQILALTQDTVVSENALTFNDLGIAPHKLKGYPVE 330
            IS   E LL +       P+ F  DQI    QD   +  ALT  DL +    ++   + 
Sbjct: 289 FIS---EHLLERF---ARNPN-FIKDQIDYHNQDMTTTVGALTLKDLNVTTTPIQEKLIR 344

[Close]

BLAST of Cp4.1LG12g10210 vs. Swiss-Prot
Match: NDUA9_BOVIN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Bos taurus GN=NDUFA9 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.6e-21
Identity = 82/245 (33.47%), Postives = 119/245 (48.57%), Query Frame = 1


Query: 53  LVRKGTGGRSSVSGIVATVF---GATG-----FLGR-------------YVVQQLAKMG- 112
           ++  G GGRSSVSGIVATVF   G  G      LGR             Y    L  MG 
Sbjct: 40  VIPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIVPHRCEPYDTMHLRPMGD 99

Query: 113 -----------------------SQVLVPFRGSEDSPRH-------LKLMGDLGQIAKEH 172
                                  S V++   G E   ++       +K+   + Q++KE 
Sbjct: 100 LGQIIFMDWNGRDKDSIRRAVEHSSVVINLVGREWETQNFDFEDVFVKIPQAIAQVSKE- 159

Query: 173 GGILRFIQVSCLGASSSSPSRFLRAKAAAEESVLKAFPEATILRPAGMIGTEDRIMNTWA 232
            G+ +FI +S L A   S S++LR+KA  E+ V + FPEATI++PA + G EDR +N +A
Sbjct: 160 AGVEKFIHISHLNADIKSSSKYLRSKAVGEKEVRETFPEATIIKPAEIFGREDRFLNYFA 219

Query: 233 HFAKKYGFVPLFGDGSTKI-QPVYVVDVAAGAVSALTDDGTSIGKVYELGGPEIFTVHDL 245
           +  + +G VPL   G   + QPVY+VDV  G ++A+ D     GK +   GP  + + DL
Sbjct: 220 NI-RWFGGVPLISLGKKTVKQPVYIVDVTKGIINAIKDPDAR-GKTFAFVGPSRYLLFDL 279

[Close]

BLAST of Cp4.1LG12g10210 vs. TrEMBL
Match: A0A0B0N2P0_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_12346 PE=4 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 6.1e-150
Identity = 274/371 (73.85%), Postives = 307/371 (82.75%), Query Frame = 1


Query: 1   MQAISRRLAQQQSLNSPSSIASLKFIYPLSHHYCGADRPRYESTLAT-RGVGHLVRKGTG 60
           MQAI+RRL  Q SL   +SI+S+K I  LS HY G D PRY STLA+ +G+GHLVRKGTG
Sbjct: 1   MQAITRRLGHQ-SLRPTASISSIKSICALSDHYYGGDHPRYGSTLASHKGMGHLVRKGTG 60

Query: 61  GRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSPRHLKLMGDLGQI--- 120
           GRSSVSGI+ATVFGATGFLGRY+VQQLAKMGSQVLVPFRGSED+PRHLKLMGDLGQI   
Sbjct: 61  GRSSVSGIIATVFGATGFLGRYLVQQLAKMGSQVLVPFRGSEDNPRHLKLMGDLGQIVPM 120

Query: 121 -------------------AKEHGGILRFIQVSCLGASSSSPSRFLRAKAAAEESVLKAF 180
                              AKEHGGI+RFIQVSCLG+S +SPSRFLRAKAA EE+VLK  
Sbjct: 121 KYDPRDENSIKAVMAKANIAKEHGGIMRFIQVSCLGSSLTSPSRFLRAKAAGEEAVLKEL 180

Query: 181 PEATILRPAGMIGTEDRIMNTWAHFAKKYGFVPLFGDGSTKIQPVYVVDVAAGAVSALTD 240
           PEAT+++PA MIGTEDRIMN WAHFAKKY F+PL G GSTKIQPVYVVDVA+  V+AL D
Sbjct: 181 PEATVMKPAVMIGTEDRIMNRWAHFAKKYSFLPLIGGGSTKIQPVYVVDVASAIVAALKD 240

Query: 241 DGTSIGKVYELGGPEIFTVHDLAEIMFDMIREWPRYVKVPFPIAKAISTPREILLNKVPF 300
           DG+S+G VYELGGPEI+TVH+LAE+M++ IREWPRYV VP P+AKAI+ PRE+LL KVPF
Sbjct: 241 DGSSMGNVYELGGPEIYTVHELAELMYETIREWPRYVNVPLPVAKAIAMPREVLLKKVPF 300

Query: 301 PLPTPSIFNLDQILALTQDTVVSENALTFNDLGIAPHKLKGYPVEFLISYRKGGPQFGST 349
           PLP P IFNLDQI A   DTVVSENALTF DLGI PHKLKGYPVE+LI YRKGGPQFGST
Sbjct: 301 PLPNPDIFNLDQIHAFATDTVVSENALTFMDLGIVPHKLKGYPVEYLIQYRKGGPQFGST 360

[Close]

BLAST of Cp4.1LG12g10210 vs. TrEMBL
Match: A0A0A0KA64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087960 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 9.5e-119
Identity = 212/236 (89.83%), Postives = 225/236 (95.34%), Query Frame = 1


Query: 113 LGQIAKEHGGILRFIQVSCLGASSSSPSRFLRAKAAAEESVLKAFPEATILRPAGMIGTE 172
           L  IAKEHGGILRFIQVSCLGASSSSPSRFLR+KAA EESVLKAFPEATILRPA MIGTE
Sbjct: 166 LATIAKEHGGILRFIQVSCLGASSSSPSRFLRSKAAGEESVLKAFPEATILRPATMIGTE 225

Query: 173 DRIMNTWAHFAKKYGFVPLFGDGSTKIQPVYVVDVAAGAVSALTDDGTSIGKVYELGGPE 232
           DRI+N WAHFAKKYGF+PLFG+GSTKIQPVYVVDVA G VSAL DDGTSIGKVYELGGPE
Sbjct: 226 DRILNPWAHFAKKYGFIPLFGNGSTKIQPVYVVDVAGGIVSALKDDGTSIGKVYELGGPE 285

Query: 233 IFTVHDLAEIMFDMIREWPRYVKVPFPIAKAISTPREILLNKVPFPLPTPSIFNLDQILA 292
           I++VHDLAE+MFD+IREWP Y+KVPFPIAKAI+TPREILLNKVPFPLPTP+IFNLDQILA
Sbjct: 286 IYSVHDLAELMFDVIREWPHYLKVPFPIAKAIATPREILLNKVPFPLPTPAIFNLDQILA 345

Query: 293 LTQDTVVSENALTFNDLGIAPHKLKGYPVEFLISYRKGGPQFGSTVSEKVDPDSFP 349
           LTQDTVVSE ALTFNDLGI PHKLKGYPVEFLISYRKGGPQFGSTVSE+V+PDSFP
Sbjct: 346 LTQDTVVSEKALTFNDLGIVPHKLKGYPVEFLISYRKGGPQFGSTVSERVNPDSFP 401

[Close]

BLAST of Cp4.1LG12g10210 vs. TrEMBL
Match: F2CUT7_HORVD (Predicted protein OS=Hordeum vulgare var. distichum PE=2 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 2.8e-118
Identity = 241/399 (60.40%), Postives = 275/399 (68.92%), Query Frame = 1


Query: 3   AISRRLAQQQSLNSPSSIASLKFIYPLSHHYC-----GADRPRYESTLA--TRGVGHLVR 62
           A+ R L  Q  L+  SS A   F              GAD  RY S  A   +G GHLVR
Sbjct: 6   AVRRHLLDQHHLSPASSAAIAAFRSAAQPALAPQGLGGADGARYMSARAPAVKGAGHLVR 65

Query: 63  KGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLV-------------------- 122
           KGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLV                    
Sbjct: 66  KGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGCEDSHRHLKLMGDLGQ 125

Query: 123 --PFR-----------------------GSEDSPRHL-------KLMGDLGQIAKEHGGI 182
             P                         G E   R+        ++   L  I+KEHGGI
Sbjct: 126 IVPMNYNPRDVNSIKTAVAKSNVVINLIGREYETRNYGFEEVNHQMAEQLAMISKEHGGI 185

Query: 183 LRFIQVSCLGASSSSPSRFLRAKAAAEESVLKAFPEATILRPAGMIGTEDRIMNTWAHFA 242
           +RFIQVS LGAS+SSPSR LRAKAA EESVLK FPEATI+RPA +IGTEDRI+N WA +A
Sbjct: 186 VRFIQVSALGASASSPSRLLRAKAAGEESVLKEFPEATIMRPATLIGTEDRILNRWAMYA 245

Query: 243 KKYGFVPLFGDGSTKIQPVYVVDVAAGAVSALTDDGTSIGKVYELGGPEIFTVHDLAEIM 302
           K +GF+PLFG GSTK QPVYVVDVAA  V++L DDGTS+GK YELGGP+++TVHDLAE+M
Sbjct: 246 KNWGFLPLFGGGSTKFQPVYVVDVAAAIVNSLKDDGTSMGKTYELGGPDVYTVHDLAEMM 305

Query: 303 FDMIREWPRYVKVPFPIAKAISTPREILLNKVPFPLPTPSIFNLDQILALTQDTVVSENA 343
           ++ IRE+PRYV +PFPIAKA+++PRE+LLNKVPFPLPTPSIFNLDQI AL+ D +VSENA
Sbjct: 306 YETIREYPRYVNLPFPIAKAMASPREMLLNKVPFPLPTPSIFNLDQIKALSVDNLVSENA 365

[Close]

BLAST of Cp4.1LG12g10210 vs. TrEMBL
Match: W5G9W2_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 3.6e-118
Identity = 243/399 (60.90%), Postives = 274/399 (68.67%), Query Frame = 1


Query: 3   AISRRLAQQQSLNSPSSIASLKFIYPLS-----HHYCGADRPRYESTLA--TRGVGHLVR 62
           A  R L  Q  L+  SS A   F              GAD  RY S  A   +G GHLVR
Sbjct: 7   ATRRHLLDQHHLSPASSAAIAAFRSAAQPALGPQGLGGADGARYMSARAPAVKGAGHLVR 66

Query: 63  KGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLV-------------------- 122
           KGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLV                    
Sbjct: 67  KGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGCEDSHRHLKLMGDLGQ 126

Query: 123 --PFR-----------------------GSEDSPRHL-------KLMGDLGQIAKEHGGI 182
             P                         G E   R+        ++   L  I+KEHGGI
Sbjct: 127 IVPMNYNPRDVNSIKTAVAKSNVVINLIGREYETRNYGFEEVNHQMAEQLAMISKEHGGI 186

Query: 183 LRFIQVSCLGASSSSPSRFLRAKAAAEESVLKAFPEATILRPAGMIGTEDRIMNTWAHFA 242
           +RFIQVS LGAS+SSPSR LRAKAA EESVLK FPEATI+RPA +IGTEDRI+N WA +A
Sbjct: 187 VRFIQVSALGASASSPSRLLRAKAAGEESVLKEFPEATIMRPATLIGTEDRILNRWAMYA 246

Query: 243 KKYGFVPLFGDGSTKIQPVYVVDVAAGAVSALTDDGTSIGKVYELGGPEIFTVHDLAEIM 302
           K +GF+PLFG GSTK QPVYVVDVAA  V++L DDGTS+GK YELGGP+I+TVHDLAE+M
Sbjct: 247 KNWGFLPLFGGGSTKFQPVYVVDVAAAIVNSLKDDGTSMGKTYELGGPDIYTVHDLAEMM 306

Query: 303 FDMIREWPRYVKVPFPIAKAISTPREILLNKVPFPLPTPSIFNLDQILALTQDTVVSENA 343
           F+ IRE+PRYV +PFPIAKA+++PRE+LLNKVPFPLPTPSIFNLDQI ALT D +VSENA
Sbjct: 307 FETIREYPRYVNLPFPIAKAMASPREMLLNKVPFPLPTPSIFNLDQIKALTVDNLVSENA 366

[Close]

BLAST of Cp4.1LG12g10210 vs. TrEMBL
Match: W5GUX2_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 2.0e-116
Identity = 227/349 (65.04%), Postives = 257/349 (73.64%), Query Frame = 1


Query: 46  ATRGVGHLVRKGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLV---------- 105
           A +G GHLVRKGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLV          
Sbjct: 7   AVKGAGHLVRKGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGCEDSHR 66

Query: 106 ------------PFR-----------------------GSEDSPRHL-------KLMGDL 165
                       P                         G E   R+        ++   L
Sbjct: 67  HLKLMGDLGQIVPMNYNPRDVNSIKTAVAKSNVVINLIGREYETRNYGFEEVNHQMAEQL 126

Query: 166 GQIAKEHGGILRFIQVSCLGASSSSPSRFLRAKAAAEESVLKAFPEATILRPAGMIGTED 225
             I+KEHGGI+RFIQVS LGAS+SSPSR LRAKAA EESVLK FPEATI+RPA +IGTED
Sbjct: 127 AMISKEHGGIVRFIQVSALGASASSPSRLLRAKAAGEESVLKEFPEATIMRPATLIGTED 186

Query: 226 RIMNTWAHFAKKYGFVPLFGDGSTKIQPVYVVDVAAGAVSALTDDGTSIGKVYELGGPEI 285
           RI+N WA +AK +GF+PLFG GSTK QPVYVVDVAA  V++L DDGTS+GK YELGGP+I
Sbjct: 187 RILNRWAMYAKNWGFLPLFGGGSTKFQPVYVVDVAAAIVNSLKDDGTSMGKTYELGGPDI 246

Query: 286 FTVHDLAEIMFDMIREWPRYVKVPFPIAKAISTPREILLNKVPFPLPTPSIFNLDQILAL 343
           +TVHDLAE+MF+ IRE+PRYV +PFPIAKA+++PRE+LLNKVPFPLPTPSIFNLD I AL
Sbjct: 247 YTVHDLAEMMFETIREYPRYVNIPFPIAKAMASPREMLLNKVPFPLPTPSIFNLDHIKAL 306

[Close]

BLAST of Cp4.1LG12g10210 vs. TAIR10
Match: AT2G20360.1 (AT2G20360.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 374.8 bits (961), Expect = 5.9e-104
Identity = 179/248 (72.18%), Postives = 209/248 (84.27%), Query Frame = 1


Query: 101 EDSPRHLKLMGDLGQIAKEHGGILRFIQVSCLGASSSSPSRFLRAKAAAEESVLKAFPEA 160
           ED+  H+     L  +AKEHGGI+R+IQVSCLGAS SSPSR LRAKAAAEE+VL A PEA
Sbjct: 157 EDANHHIA--EKLALVAKEHGGIMRYIQVSCLGASVSSPSRMLRAKAAAEEAVLNALPEA 216

Query: 161 TILRPAGMIGTEDRIMNTWAHFAKKYGFVPLFGDGSTKIQPVYVVDVAAGAVSALTDDGT 220
           TI+RPA MIGTEDRI+N W+ F KKYGF+PL G G+TK QPVYVVDVAA  V+AL DDG+
Sbjct: 217 TIMRPATMIGTEDRILNPWSMFVKKYGFLPLIGGGTTKFQPVYVVDVAAAIVAALKDDGS 276

Query: 221 SIGKVYELGGPEIFTVHDLAEIMFDMIREWPRYVKVPFPIAKAISTPREILLNKVPFPLP 280
           S+GK YELGGP++FT H+LAEIM+DMIREWPRYVK+PFPIAKA++ PR+ ++NKVPFPLP
Sbjct: 277 SMGKTYELGGPDVFTTHELAEIMYDMIREWPRYVKLPFPIAKAMAAPRDFMVNKVPFPLP 336

Query: 281 TPSIFNLDQILALTQDTVVSENALTFNDLGIAPHKLKGYPVEFLISYRKGGPQFGSTVSE 340
           +P IFNLDQI ALT DT+VS+NAL F DL + PHKLKGYPVEFLI YRKGGP FGSTVSE
Sbjct: 337 SPQIFNLDQINALTTDTLVSDNALKFQDLDLVPHKLKGYPVEFLIQYRKGGPNFGSTVSE 396

Query: 341 KVDPDSFP 349
           K+  D +P
Sbjct: 397 KIPTDFYP 402

[Close]

BLAST of Cp4.1LG12g10210 vs. NCBI nr
Match: gi|728829200|gb|KHG08643.1| (hypothetical protein F383_12346 [Gossypium arboreum])

HSP 1 Score: 538.5 bits (1386), Expect = 8.7e-150
Identity = 274/371 (73.85%), Postives = 307/371 (82.75%), Query Frame = 1


Query: 1   MQAISRRLAQQQSLNSPSSIASLKFIYPLSHHYCGADRPRYESTLAT-RGVGHLVRKGTG 60
           MQAI+RRL  Q SL   +SI+S+K I  LS HY G D PRY STLA+ +G+GHLVRKGTG
Sbjct: 1   MQAITRRLGHQ-SLRPTASISSIKSICALSDHYYGGDHPRYGSTLASHKGMGHLVRKGTG 60

Query: 61  GRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSPRHLKLMGDLGQI--- 120
           GRSSVSGI+ATVFGATGFLGRY+VQQLAKMGSQVLVPFRGSED+PRHLKLMGDLGQI   
Sbjct: 61  GRSSVSGIIATVFGATGFLGRYLVQQLAKMGSQVLVPFRGSEDNPRHLKLMGDLGQIVPM 120

Query: 121 -------------------AKEHGGILRFIQVSCLGASSSSPSRFLRAKAAAEESVLKAF 180
                              AKEHGGI+RFIQVSCLG+S +SPSRFLRAKAA EE+VLK  
Sbjct: 121 KYDPRDENSIKAVMAKANIAKEHGGIMRFIQVSCLGSSLTSPSRFLRAKAAGEEAVLKEL 180

Query: 181 PEATILRPAGMIGTEDRIMNTWAHFAKKYGFVPLFGDGSTKIQPVYVVDVAAGAVSALTD 240
           PEAT+++PA MIGTEDRIMN WAHFAKKY F+PL G GSTKIQPVYVVDVA+  V+AL D
Sbjct: 181 PEATVMKPAVMIGTEDRIMNRWAHFAKKYSFLPLIGGGSTKIQPVYVVDVASAIVAALKD 240

Query: 241 DGTSIGKVYELGGPEIFTVHDLAEIMFDMIREWPRYVKVPFPIAKAISTPREILLNKVPF 300
           DG+S+G VYELGGPEI+TVH+LAE+M++ IREWPRYV VP P+AKAI+ PRE+LL KVPF
Sbjct: 241 DGSSMGNVYELGGPEIYTVHELAELMYETIREWPRYVNVPLPVAKAIAMPREVLLKKVPF 300

Query: 301 PLPTPSIFNLDQILALTQDTVVSENALTFNDLGIAPHKLKGYPVEFLISYRKGGPQFGST 349
           PLP P IFNLDQI A   DTVVSENALTF DLGI PHKLKGYPVE+LI YRKGGPQFGST
Sbjct: 301 PLPNPDIFNLDQIHAFATDTVVSENALTFMDLGIVPHKLKGYPVEYLIQYRKGGPQFGST 360

[Close]

BLAST of Cp4.1LG12g10210 vs. NCBI nr
Match: gi|659120025|ref|XP_008459972.1| (PREDICTED: LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 442.6 bits (1137), Expect = 6.5e-121
Identity = 217/236 (91.95%), Postives = 225/236 (95.34%), Query Frame = 1


Query: 113 LGQIAKEHGGILRFIQVSCLGASSSSPSRFLRAKAAAEESVLKAFPEATILRPAGMIGTE 172
           L  IAKEHGGILRFIQVSCLGASSSSPSRFLR+KAA EESVLKAFPEATILRPA MIGTE
Sbjct: 167 LATIAKEHGGILRFIQVSCLGASSSSPSRFLRSKAAGEESVLKAFPEATILRPATMIGTE 226

Query: 173 DRIMNTWAHFAKKYGFVPLFGDGSTKIQPVYVVDVAAGAVSALTDDGTSIGKVYELGGPE 232
           DRIMN WAHF KKYGF+PLFGDGSTKIQPVYVVDVAAG VSAL DDGTSIGKVYELGGPE
Sbjct: 227 DRIMNPWAHFLKKYGFIPLFGDGSTKIQPVYVVDVAAGIVSALKDDGTSIGKVYELGGPE 286

Query: 233 IFTVHDLAEIMFDMIREWPRYVKVPFPIAKAISTPREILLNKVPFPLPTPSIFNLDQILA 292
           I+TVHDLAE+M+DMIREWPRY+KVPFPIAKAI+TPREILLNKVPFPLPTPSIFNLDQILA
Sbjct: 287 IYTVHDLAELMYDMIREWPRYLKVPFPIAKAIATPREILLNKVPFPLPTPSIFNLDQILA 346

Query: 293 LTQDTVVSENALTFNDLGIAPHKLKGYPVEFLISYRKGGPQFGSTVSEKVDPDSFP 349
           LTQDTVVSE ALTFNDLGI PHKLKGYP+EFLISYRKGGPQFGSTVSEKV PDSFP
Sbjct: 347 LTQDTVVSEKALTFNDLGIIPHKLKGYPIEFLISYRKGGPQFGSTVSEKVSPDSFP 402

[Close]

BLAST of Cp4.1LG12g10210 vs. NCBI nr
Match: gi|778711581|ref|XP_011656761.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 434.9 bits (1117), Expect = 1.4e-118
Identity = 212/236 (89.83%), Postives = 225/236 (95.34%), Query Frame = 1


Query: 113 LGQIAKEHGGILRFIQVSCLGASSSSPSRFLRAKAAAEESVLKAFPEATILRPAGMIGTE 172
           L  IAKEHGGILRFIQVSCLGASSSSPSRFLR+KAA EESVLKAFPEATILRPA MIGTE
Sbjct: 166 LATIAKEHGGILRFIQVSCLGASSSSPSRFLRSKAAGEESVLKAFPEATILRPATMIGTE 225

Query: 173 DRIMNTWAHFAKKYGFVPLFGDGSTKIQPVYVVDVAAGAVSALTDDGTSIGKVYELGGPE 232
           DRI+N WAHFAKKYGF+PLFG+GSTKIQPVYVVDVA G VSAL DDGTSIGKVYELGGPE
Sbjct: 226 DRILNPWAHFAKKYGFIPLFGNGSTKIQPVYVVDVAGGIVSALKDDGTSIGKVYELGGPE 285

Query: 233 IFTVHDLAEIMFDMIREWPRYVKVPFPIAKAISTPREILLNKVPFPLPTPSIFNLDQILA 292
           I++VHDLAE+MFD+IREWP Y+KVPFPIAKAI+TPREILLNKVPFPLPTP+IFNLDQILA
Sbjct: 286 IYSVHDLAELMFDVIREWPHYLKVPFPIAKAIATPREILLNKVPFPLPTPAIFNLDQILA 345

Query: 293 LTQDTVVSENALTFNDLGIAPHKLKGYPVEFLISYRKGGPQFGSTVSEKVDPDSFP 349
           LTQDTVVSE ALTFNDLGI PHKLKGYPVEFLISYRKGGPQFGSTVSE+V+PDSFP
Sbjct: 346 LTQDTVVSEKALTFNDLGIVPHKLKGYPVEFLISYRKGGPQFGSTVSERVNPDSFP 401

[Close]

BLAST of Cp4.1LG12g10210 vs. NCBI nr
Match: gi|326507730|dbj|BAJ86608.1| (predicted protein [Hordeum vulgare subsp. vulgare])

HSP 1 Score: 433.3 bits (1113), Expect = 4.0e-118
Identity = 241/399 (60.40%), Postives = 275/399 (68.92%), Query Frame = 1


Query: 3   AISRRLAQQQSLNSPSSIASLKFIYPLSHHYC-----GADRPRYESTLA--TRGVGHLVR 62
           A+ R L  Q  L+  SS A   F              GAD  RY S  A   +G GHLVR
Sbjct: 6   AVRRHLLDQHHLSPASSAAIAAFRSAAQPALAPQGLGGADGARYMSARAPAVKGAGHLVR 65

Query: 63  KGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLV-------------------- 122
           KGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLV                    
Sbjct: 66  KGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGCEDSHRHLKLMGDLGQ 125

Query: 123 --PFR-----------------------GSEDSPRHL-------KLMGDLGQIAKEHGGI 182
             P                         G E   R+        ++   L  I+KEHGGI
Sbjct: 126 IVPMNYNPRDVNSIKTAVAKSNVVINLIGREYETRNYGFEEVNHQMAEQLAMISKEHGGI 185

Query: 183 LRFIQVSCLGASSSSPSRFLRAKAAAEESVLKAFPEATILRPAGMIGTEDRIMNTWAHFA 242
           +RFIQVS LGAS+SSPSR LRAKAA EESVLK FPEATI+RPA +IGTEDRI+N WA +A
Sbjct: 186 VRFIQVSALGASASSPSRLLRAKAAGEESVLKEFPEATIMRPATLIGTEDRILNRWAMYA 245

Query: 243 KKYGFVPLFGDGSTKIQPVYVVDVAAGAVSALTDDGTSIGKVYELGGPEIFTVHDLAEIM 302
           K +GF+PLFG GSTK QPVYVVDVAA  V++L DDGTS+GK YELGGP+++TVHDLAE+M
Sbjct: 246 KNWGFLPLFGGGSTKFQPVYVVDVAAAIVNSLKDDGTSMGKTYELGGPDVYTVHDLAEMM 305

Query: 303 FDMIREWPRYVKVPFPIAKAISTPREILLNKVPFPLPTPSIFNLDQILALTQDTVVSENA 343
           ++ IRE+PRYV +PFPIAKA+++PRE+LLNKVPFPLPTPSIFNLDQI AL+ D +VSENA
Sbjct: 306 YETIREYPRYVNLPFPIAKAMASPREMLLNKVPFPLPTPSIFNLDQIKALSVDNLVSENA 365

[Close]

BLAST of Cp4.1LG12g10210 vs. NCBI nr
Match: gi|1000951298|ref|XP_015579279.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 413.3 bits (1061), Expect = 4.2e-112
Identity = 194/236 (82.20%), Postives = 220/236 (93.22%), Query Frame = 1


Query: 113 LGQIAKEHGGILRFIQVSCLGASSSSPSRFLRAKAAAEESVLKAFPEATILRPAGMIGTE 172
           L  IAKEHGGI+R+IQVSCLG+SSSSPSR LRAKAAAEE+VL+  PEAT+++PA MIGTE
Sbjct: 165 LAMIAKEHGGIMRYIQVSCLGSSSSSPSRMLRAKAAAEEAVLREIPEATVMKPAAMIGTE 224

Query: 173 DRIMNTWAHFAKKYGFVPLFGDGSTKIQPVYVVDVAAGAVSALTDDGTSIGKVYELGGPE 232
           DRI+N WAHF KKY F+PLFGDGSTK+QPVYVVDVAA  ++AL DDG+S+GK+YELGGPE
Sbjct: 225 DRILNKWAHFVKKYSFLPLFGDGSTKLQPVYVVDVAAAIIAALKDDGSSMGKIYELGGPE 284

Query: 233 IFTVHDLAEIMFDMIREWPRYVKVPFPIAKAISTPREILLNKVPFPLPTPSIFNLDQILA 292
           I TVH+LAEIMFDMIREWPRYVKVPFPIAKAI+TPRE+L+NKVPFPLPTP+IFNLD+I+A
Sbjct: 285 ILTVHELAEIMFDMIREWPRYVKVPFPIAKAIATPREVLINKVPFPLPTPNIFNLDEIIA 344

Query: 293 LTQDTVVSENALTFNDLGIAPHKLKGYPVEFLISYRKGGPQFGSTVSEKVDPDSFP 349
           LT DTVVSENALTF+DLGI PHKLKGYPVE+LISYRKGGPQFGSTVSE+V PDSFP
Sbjct: 345 LTMDTVVSENALTFHDLGIMPHKLKGYPVEYLISYRKGGPQFGSTVSERVSPDSFP 400

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g10210 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NDUA9_ARATH	1.0e-102	72.18	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=A...	[more]
CCB12_ORYSJ	3.1e-38	56.86	Cyclin-B1-2 OS=Oryza sativa subsp. japonica GN=CYCB1-2 PE=3 SV=1	[more]
NDUA9_NEUCR	1.2e-29	31.98	NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial OS=Neurospora crass...	[more]
NDUA9_DICDI	4.1e-22	31.05	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=D...	[more]
NDUA9_BOVIN	2.6e-21	33.47	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=B...	[more]

BLAST of Cp4.1LG12g10210 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0B0N2P0_GOSAR	6.1e-150	73.85	Uncharacterized protein OS=Gossypium arboreum GN=F383_12346 PE=4 SV=1	[more]
A0A0A0KA64_CUCSA	9.5e-119	89.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087960 PE=4 SV=1	[more]
F2CUT7_HORVD	2.8e-118	60.40	Predicted protein OS=Hordeum vulgare var. distichum PE=2 SV=1	[more]
W5G9W2_WHEAT	3.6e-118	60.90	Uncharacterized protein OS=Triticum aestivum PE=4 SV=1	[more]
W5GUX2_WHEAT	2.0e-116	65.04	Uncharacterized protein OS=Triticum aestivum PE=4 SV=1	[more]

BLAST of Cp4.1LG12g10210 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20360.1	5.9e-104	72.18	NAD(P)-binding Rossmann-fold superfamily protein	[more]

BLAST of Cp4.1LG12g10210 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|728829200\|gb\|KHG08643.1\|	8.7e-150	73.85	hypothetical protein F383_12346 [Gossypium arboreum]	[more]
gi\|659120025\|ref\|XP_008459972.1\|	6.5e-121	91.95	PREDICTED: LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone]	[more]
gi\|778711581\|ref\|XP_011656761.1\|	1.4e-118	89.83	PREDICTED: NADH dehydrogenase [ubiquinone]	[more]
gi\|326507730\|dbj\|BAJ86608.1\|	4.0e-118	60.40	predicted protein [Hordeum vulgare subsp. vulgare]	[more]
gi\|1000951298\|ref\|XP_015579279.1\|	4.2e-112	82.20	PREDICTED: NADH dehydrogenase [ubiquinone]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016040	NAD(P)-bd_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0008150	biological_process
biological_process	GO:1901006	ubiquinone-6 biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0015992	proton transport
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0009853	photorespiration
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
cellular_component	GO:0016020	membrane
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0050662	coenzyme binding
molecular_function	GO:0003954	NADH dehydrogenase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g10210.1	Cp4.1LG12g10210.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016040	NAD(P)-binding domain	GENE3D	G3DSA:3.40.50.720		coord: 56..108 score: 1.2E-9coord: 109..243 score: 1.9
IPR016040	NAD(P)-binding domain	unknown	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 68..284 score: 7.08
None	No IPR available	PANTHER	PTHR12126	NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RELATED	coord: 1..350 score: 1.3E
None	No IPR available	PANTHER	PTHR12126:SF7	NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 9, MITOCHONDRIAL	coord: 1..350 score: 1.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG12g10210	Cucsa.348830	Cucumber (Gy14) v1	cgycpeB0907
Cp4.1LG12g10210	CmoCh08G000450	Cucurbita moschata (Rifu)	cmocpeB841
Cp4.1LG12g10210	Cla007060	Watermelon (97103) v1	cpewmB156
Cp4.1LG12g10210	Csa6G087960	Cucumber (Chinese Long) v2	cpecuB142
Cp4.1LG12g10210	MELO3C022394	Melon (DHL92) v3.5.1	cpemeB114
Cp4.1LG12g10210	ClCG06G001380	Watermelon (Charleston Gray)	cpewcgB140
Cp4.1LG12g10210	CSPI06G06950	Wild cucumber (PI 183967)	cpecpiB144
Cp4.1LG12g10210	Lsi09G018020	Bottle gourd (USVL1VR-Ls)	cpelsiB103
Cp4.1LG12g10210	MELO3C022394.2	Melon (DHL92) v3.6.1	cpemedB140
Cp4.1LG12g10210	CsaV3_6G007320	Cucumber (Chinese Long) v3	cpecucB0166
Cp4.1LG12g10210	Bhi12G002081	Wax gourd	cpewgoB0175
Cp4.1LG12g10210	CsGy6G006980	Cucumber (Gy14) v2	cgybcpeB722
Cp4.1LG12g10210	Carg03785	Silver-seed gourd	carcpeB1355
Cp4.1LG12g10210	Carg11536	Silver-seed gourd	carcpeB0018

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG12g10210	Cp4.1LG17g09700	Cucurbita pepo (Zucchini)	cpecpeB170

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG12g10210	Cucurbita maxima (Rimu)	cmacpeB371
Cp4.1LG12g10210	Cucurbita maxima (Rimu)	cmacpeB905
Cp4.1LG12g10210	Cucurbita moschata (Rifu)	cmocpeB335