Cp4.1LG12g09870 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g09870
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPlant protein of unknown function (DUF247)
LocationCp4.1LG12 : 5263810 .. 5274870 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGGTAATCTTATGCTAAAAATTTTAGTATAAAACTTTTCATATCATCTCTATTCATTGTTTGTCATAGAAAAGCATTTAAGATTGGCACGGGCCAATGAAAATCATAAGCTTAATACTATGTTATAATTTCATATATATTACATACTTATATGTTACTTAACTATCCTATGTTACTTAACATCAATGTTAAAAATGTCGATATTGAGTCTCTATTTTATGAAAATATAAATATGAAACTATCCTAAAATGATGAAGTCAATGAATAATTCTAAAAATAATATAAAACAATCAATTTAAAAAAATATATAATTAAGTTAATATATAAATATTTTAAACTTTTTAAATATGTTCAAATACTTATTATTAACATAGGAGAGAGGGAGAAAGAGNAAAAAAAAAAGCATGAAGAGGTCATAGATAAATCTAGTCTTAAATAATGAACATTTTTTAATTTGGTCGAATTCCTCGATAAATGTGCATACTTAGTTGCTGAAATCGGTAGGGTGGTAGAATTGAAGTTTGCTCAATAAATAAATCCTGCGGTAAAAAACTTGGATGGGCTAAACATAGAGTGTCAAGACCCAATTTTCGAGGCTTCGAAACTTGATCCAGACTAAAAAGATCAAAGTAAAAACAAACAAAAACAAAATCAAAATAAAGCGAAACAGCGAAAATGTAGAAAATATAGTAAGAATTCGCGCGATTTTAAAAGTCATACAACACCATTGTCAAAGTTATTTACAAACGGGAAAAGAGTACATGATACAAAAGACTACAAAAGTAACCCAAAAGAATACAATTGACTGACTGACGCCCCGGGTCCCCACCACGACCATTACTGAGAAAGTAAAGGAGAAAACGGAGTGAGTATAAAAATATACTCAGTAAGCAACCTACTTGTTGGCTCTCGTCGCTTCCTTCTACTAGTAGGTTTCCACGACTTTCTTTGGTTTAAACGATGACCCAAGTTATTCCTCTTTGTTCATCTACTCGTGTAGTCCCTAGTCCTTGTCGAGACTGGTTTACGGCGTCGTAACATTGACCTTGACCTGTTTCTACACTCAATAGAAGTTGCTCATGACAAACCACCTACCCACGTAGTCCTTGATCTCTTCCAAGACCAGTTTACGAAGTCGCAGCATCGGCCTTGACTCGTTTCTACGCTCAATAGGAGTTGTTAATGCTAAAACACCTACCCACTCCTAGTCCAACCAAGACTGGTTTACGAAGTTGCAACATTAGCTTTGACTCATTTCTACGCACAATAAGGGCTCTTATCTTGTCACCTACTCGTGTAGTCCCTAGTCCACCAATGACTGGTTTACAAATTTCCCTATTTCTACCCTCAATAGGGCTCTCCACCTGCCCACGCAATCCCTAGTCCAATCAAGACTAGTTTACAAGTTCACCTGTTTCTATCCTTAATAGGGTTTTCCACCTACCCACGTAGTCCCTGGTCCAATTAAGACTGGTTTACAGGTTCACCTGTTTCTACGTTCAACAAGGGGTTCATGTCTTGCGCTAACGACTTATGTAGTGTCTAGTTCTTCTTAAGAACTAGTTTAATGGGATTAGGGCATCGACCCTGTCCCGACTCTACACTCAATAGTAGCTCAACTAGTTTCTTGATCATGTAATCTACTTAAATCTTGTCAATACACCGTGGAGGCCTACTAGGTTCTTAGGGGCGTTCATATAGTTTAAAATCCTTTTTCTCAATTCCATGTCATTCTATGTTAGTCTCTCAGCTTAACCAATCCCGGGGTGCACATAAGTCAATCCTCTGGGTCTACATGTAACCCGCTCTAGCTATAGCACCCTAATCTTAATTGTGATCTTGACGCATGCTCTACTAGGAAAAATATATCTATCAAGCATCTCTAGCACATAAATCATGTATATCGATTCACATAAGTTATTTAAGAAGGTATTCCTACCAAACCTTATTGCATGAAAATCATGTCATAAATCATACACACAATCAACAATCAAACAAGCTCAAGGGGAGAAAACATCCATCAATTACCCGGAGCACAGATCAGAATATCCCATCCTCTATCATACCATAGCGGAAGACATTAAACTAGGCATGTTTCTAAATTCTCTTGTTCTAAGGGCAATTTCGTAATTTCATCATGCATGTCATAATCACCAAAATTGTTCATTCTTATTTCTAATTACGCATATTCTAACCACATAAGGTGATATGAACCAAGAGACATCCATCATACAATATACTTCAATGAAGATGTGAAGAAATAAAGCGTGTCCTTGCGATCCTTACAAGTATTATTTGCCTAAAATCTAGGTGATTACTTACCGAAATAAAGCGTGTCCTTGCGATCCTTACAAGTATTATTTGCCTAAAATCTAGGTGATTACTTACCGAAATAAAGCGTGTCCTTCGAAGCTTACTTTTCCGCTAATTGGGAGCCCCAAATCTATTGAAAGTTCTCTAGTAGGTCCTGAATCAAGTTAAATTTAGGCCAGCATCAAAACTGGGACGAAAAATAGTCAAACGGGAGTCAAATCGAGCCCAAAATATGTCTCACGCGCCGGAGGAGATGCTTAAGCGCAAAACCACGCGTGCGTTCGGACGCGCTGAGGCGATGGAGACACGCGCTGAGGTTTTGCCACGTGGTGCGGACTGAATGGTTCATCGAGGCTGAGGGTGTGAGTTCAAAACTAAAAGGGCGCGCTGGGAAACAATTTTTCTCACGTTGATGCATGGGGTTGAGTCAGGTCAGATCTCTTCGCCAGGTCGCGCGTGGATTATCGAGTACCGGTCTTCGAATCTTGCACGACGTAAGATTTCCTCTATTTTTTTCTCAGCCTATGCGCTCTTGACATGCATCCTCCTTTACCGGCAACGCGCGACCCTCTCGCCAATCGACATGTGTCCCTTCGCCGTTTATCTTCTACTTCCACGAAAACTGATTATTTTCTATTTTCTTTGCATTTTGTATTCCTTTCTACGTAACTTAGATTAACATGGTTCCTTCATGAAATTTGTAGAGTTTATATCTATTTATGATTATGTATTTTTCTTCTAATTTATTTCTAAACATAAGCTAATAGATCAAAGTCCAAAATTAGCAAAAAAATTAACAACTCGCAAATCCGAAAGAACGACGAAACCCCTATCTCGGATCCGAATCGACTACAACTTCTTTCACACATTATGAGTGCAATCTTTCATAGATTAACATACTCAAACTTCAAAAACGATCTCCTAGTGCTTCTCACAGATTTGAAGGAAATCCGAGAGCAAAAGTTCAAGAACTTACTTCCGTGTTTTCTTCGTTCCCTGACAGTTTTGGATGATCCGAAGATTCAGAACGCTTCTCCTCTAGGTTTTGTGAAGGAGGCTCAGCCCGAATCGAACTCCTTGTCACCAAATCGGAGTTGAGTCGGTTATTTTTCCCTCTCTAGAACCTTCCTTTCTCTATATTCTCTTTTTCCTTTCCTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTGGTTTTCTTTTTCTTTAATCTCTCTGATTTCAGTTTTGAGGTACCTAATTAAGAAGGAGGGTAGAATGACCATAATGCCCCTCCCGTCAGTTGACTTTGACAACTTTCTCAATTTTCCAACATTTTTGTTGAGCGTGGGACTTTTCTAAGTATTTTTCTCTTCTATAATATATTGAAATTTCATTTTTAAAGCCCTCCATAAAATTTCGTAAATACTTCATTGAGATTCGGGTGTCGCATAGAATTTGGTTAAAAGCTAGCTCCACCCAACAAAATTGAATAGTCCATGCAACGAAGATCTTTTCAATACCTTAACAATGAATGATAAGGACTTAATGCCATTAGAAAAAGGATTAGAAAAAGGATTAGAAAAAAAAGAAAAGGAAAAAAAAATTCATTTTCTAATTTTTAGGAACTCTAATAAGGAAATTTAATTCCTTCTAGGAAGGAAATTAGAGATGTTCGAGAAGAAAAAAAAAATGACAAAAGTGACAAATTATCAAAATGCTTCAAAAGTTTGAAATATTTACACAAATGCCATTGAATAAGAAAAAGACCGTACGGATGGTCTATACAAAATTGAATGATATAAACCACGACTAAGAAATTTCCATACCTAAATGTCCAATTACAAAGACGAGAGCTAAGAAGCTACAACAAACTTTGTACACTTATATTCAAGCTATGGTTAGCTCGTTCAAGAAAATTCTAAAAGACTTTCATTTATATGCCGTGCAAAGTTGAATTTCAAGAAGAGATACAATAAATGCACCTTAATTTGCATTTAATGAACTAATTGAATTTATGGAAGTAGCCACAATGGTTTCATTTATTACATTATTTAATTATAATTTAAATATTTATTTATAATATTTAAGCTAATTTTTTAATATATGAGTTAAAGTTATATTGCAACACATATGGTATGCCATTTTAATATGGAAGTTATGAATATTTTTCATTAACTAGTCATTTTAATATGGAGGTTAGGGTATTTCTCATTAACTAGCCCATTTAATACGAAGATTATGTGTCACATACGTTAAGGTTGTAAAGATTGTATAAAAAAAAAAAATTTATGAGAAAGATCCCATTTTAGAATTAAAAATAAATAAATTTATATACTCTTGGGTTTAGATTCCATGCAAGTCATTCAAGTGGTATTTATCAAACCTCTTGTGTAGTGATACAAATCATGAGTTTATAAACGAATTTTCTTTAATTTTGATGTGGATCATCAAGGTAATCCGTTCCAAACTTTCTCTTGAGTTGATTCCATATCATTGAGTATATTTTTAAATCCAGTCATTGGATCATTCCAGACTTGGATATGCTCGAGAAGACACACACCTAAAAAACCCAACGACTTCAATTCAAATTGAAGGTTGGCGAGCCTCTTATTAGAGAAGATATTTTCGACAAAATTTTTTGAAAATTTGATTTCAAATTCATGGCAGTTCTTCATATTTCATTCGAATACTACCGAGATGCATTCATTCGAATTGAACACAACGTAGAGCTTCAATTCTACAAAAGATTTCCTCATATAGGTGCTGATTTGGTCGAGTTGGAAAATCAAATTCCTTTTTTTTGTTCTTCAACCTCCGTCCCCTTTATAAGACTTGCAATTGTATTTACATCATGGGATTGTAAATAATTACTATCTTTATAATCCCTTGTTGACAAATGCACAAAGCATTTCATCGATTTCTTAAGCTTCTTCTTCGTCCCCACGATACCTTCTAAGAACAATAGTAAAGAAGAAAAATCAATTATTCCTCCATCGATAACTGAGCTCCGCAAAGCCGGTGTCACCATCAAGAAAGCAGAAAATGCCAATGTGAGCTTCAAAAATGGGGTTTTTGAAATCTCACCCATACTTATTGATGATTACTTTGAAACCATGATGCAAAAACCTAATAGCGTTTGAGCATTTTTTATGTCGGAAATGACAACAACTGTATCCAATATGTGTCATTATTTGATCATTTGATATGTATAGAGAAAGATGTGAGTGTACTTGCAAAAGCCGGAATCATAATAAACGAAATTGGAGGTAGTAGTATAGAATGTTTAATAATCTCTGTAAATTTGTTACAGTCCCAAATTGTTGCAACTTCAACGATATTAACAAAGCTTTACGAGAACATTGCAGTAGACGATGGAACAAGGCGATAGCTACACTCAAACATAACTATTTCAATACGCCTTGGGCTATTGTCTCCTTGGTTTGTGCAATCTTACTCCTTATTTTAGCCATGCTTTAAACTATAATTTCTTATATATCAGCATTTTCTAACGAGTGAAATCTATCCAAATAATATATGTATGTATCTTTTAAATTTTCGTCGTTCAATCTTACCTTATTAAATGTTAATGGCCAATCTTTTTAAATAAATATTATGTTACATTTGTGTTTGTTATCATACCTAATGAACCATAATCTTATGCTAAAAGTTCTATATTATCTCTATTTTTTGTCCGTCATAGAAAAGCATTTAAGATTGACACGGGTCCATGAAAATTTGTGTTTTGTGCATAATGATAAAGTTTTGAAATTTTTGTTTACTCTTTGCTATTTTTTTTTTCTATATTTGTTTTATACTAAACAATTAAAACTATATTAGATATCAATTCTTTTGAAATTTAAGGAGTGAAGTTTTGTTTCCATTAAAACTATATTAGTTGGATCTTCTCCAAACTTGGATATGTTCTAGAAGACACACACCTAAAACATCCTACGACTTCAATTCAAAATGAAGGTTGACGAGTCTCTTATTGGAAAAGATATTTTTTACCAAAATTTTAGAAAATTTGATTTCAAATTCATGGGAGCTCTTCACATTTCAAAGTTAATTTAAACTTCCTCTATAAATGATTAAGTAAGGGCAGTCATTAGGAGCAATAATCGAGTAGTATCGAGCCTTCAACCGTGAGCCATCAACATTTAGATTTTGAAAATCTCTTCCTTTAATTTCTTCCAAATTTGAGAGTTATAATTCATCATTTCCCTTCAAACTTGTTTCTATACCTTCTAAAAAGTATTATATACCTTCTAAAAAGTATTATATACCTTCTAAAAAGTATTATATACCTTCTAAAAAGTATTATCCACAAGTTTTGTGAAGAAACCAAGAGTTTAAAATGTTCCTAACTTATATGTCTAATTCCATGTGTCATTATATAAGTTTAAAAGCTTTGAATCGCAATTTCAGGTTACACATGAAGTAATCATGTCTAACCTATCACATTCACTTTTTGTACCATGAAGAAGCATTTTCCAATTAAAGGAAAATATATTTGGGTAAGATTTGAGGGTAAGTTCAAATTTCCTACCTAGGGTCCTATCAACAAAAATTAAGCACTACATTAACTTCATAGAATTAAATTTAAAATGTTTTAAAGAGTTAGACCTAATAAGGACGAGAGGGAGATACCAAAGAAGATTGAGTTTCTGCGCTTTGGTTGACTTCCAAATTGAGACTTCGACTCCAAGATCAGCCACGATCACACAAATTCATTCCTAAAAAATAATTTCTTAAGCATGAAGTTTGTATAAGGAAGAAGTTTCGTGAAAACATCATGTCTAGAAAAAGTCTCAATCAGCCTGACGAATAAGAAATTCTTGTGGGTTTACACTAGCAAGAAAACATATTTTTACCCAACTTTGACGAATTATAACTCGAGCTACATCACACGAAAAGGTAAGATATACCATCACCAAGTTTTATGAAGAAATCTAGAGGAAAAATGCTCTAGAATAAGCTGAAAAGGTCGAGTTTGAAAAGAAGGAGGAATACACGGCCTGCGTCCTTTTCATTTTTGAAGAAGAACATGATGACATGGTTGGTTCAACTGAACAAGCCACGTCAACCTAAATTTCAACTCCCTCGTAGTCTAACTTTCATCCTAAATTTTAACCCTTTCCCAGACATGTTCTCAAATTTTTTATGGTTCTAAAAGTTAAACTCTCTAAGAAAGCTATCAAAGAAAATTTGGAGTAAACCATATACCCAAAACTTGAGAACCGAGATCCCGAACATCAACTAAGAAGTAAGTAGCCAATTTGAGTTTTTCTTAAGAAATACTCGTAGAAATTGCTTGAAAATAAATATAAATCGTATATTAAGCTATATTTAAAGGATTATAAAAGAAAAAATATTAATAACCGTAATTTCAAACCTAGCGTTTTGCTCAAGAGTCGAGTAATATTAAAATAACCCACTTAATGGACTCTACCGCAAATAAGATTTTAATGTTGAGCATAATATAATAGGTAAAACATATACACGAAATTTTGTATTCATTGGATAAGGTGGAGTAGCTAAACCAAATAATGGTATAAAATGACCATAATACCCCTGTAATAATGTAAAGCTTGTTCATAACCTTTAAATGACATGTGGTTTTAATAGAAGGCTTAAGGTAATGTATCAAGTTTGATAGTCATTAGAGTTTGTTTAGGTATCAAGTTTGATAGTCATTAGAGTTTGTTTAGGAATTGAACCAATGATAACTATAAAATGACAAAAATGTCCCTACATGCCACCAAGGATAACTATAAAATGCCTAAGCATTGGTTTATATATCAAGTAAACTCCAAATGATCTAAAATTTCATATATTAAAGGCTATAAGAGGTTACACAAGATTTTAAAGTCGTTAGAACACATTTAGGGGCTGAACCAAGGACTAAGGGAAAAATGACCCAAATGCCTCTAGGCTAACCATAAGTGTCAAAGTTCAAATGGCCTCCAATTATAATTGAGTTATGTACGATCTTAAGGATAATTATGCAAGTTTTTAAGGCATTACAATATAGTTGAAATTACTAAACTACCTCTAAAGGCGCTTAATACAGATCCATAATTTGCCTAAATACCTCAAGAAACATGCTATGATTAGCCTAAGTACTTCAAGAAACATGCTATGATTATTATAAAGACTTAGACAAGCTATTAGATAAGTTCATGTATGCATGGTCTAAGAGCTTGGATTAGGCTAAGAAATTATGATAAGGGTTATGTGGAGTTATGGTCCAAGGTTAACCTTTGGAGTAAGAATCCAAGAAACTATAAGACTAAGAAAATACTCAAAGATGGAAATACCGGTAATAACTTCCTCACAAGAATTCATGAAGTTTCCTTGAACTCAAAAGTTTTATGACACGTACGATGTTATGAAGTACTTATGCTCATAAAAATTATATGAATACATGCTTTAGGGCCATGAACTCTATGCATGATAATGGATTTAGGGTGTGTTATAAGTATGCATTACCTTAGGGTGCTACCCCAAGGACATGAATAGTAACGACCCTATTTTTGCTTCTAAAATAAAATCGCTACAATATGCATTTGTTAATTACCATTACCGATAGTAAGACCACTTACTTAGATGGTCTTAGCTGAAGTTCTATCTAACTCTAAATTAGTTTGCTTTCCTGCTTCAATTCGTTTTCACTTATGCCAAGACGATTCACGCTATTAAAGATGATCACCGAGTTCTTTTAATAATTCTAATTTCTAAATTTTGTTAAGTAATTAATAAATTCTTAATATTTCTGTTAAGATTTAATGTTTCTTGATATATAAATATCAAAGATTTAATGATTCTAATGACTTATTCTAACGTGATTTACTGTAACTTAAAATGCTAACAAAAATCTATCTAAATAATTGGATAACAAAAAAAATTCTAAATAATTTGATAATGGAAAAGTAGATCCGAGTAAAAGGTGAAGAGATCTTAAATATAACTTAGCTAAATCTGCAGATAAGAGAGGTAGATATGATTCTTACGTGATTTCTTGTAACATGTTGGATAAAGGAAACGTGATTTCTTGTAACATGTTGGATAAAGGAAGAGGAGATCTTAAATATAACTTAGGGCCCAAGACATTCTCAAACATATTATAAGAATAAAAGAAAAAAATAAAAAGGAAAATGTAAGAATAGATAAAAATTGGCCAATGACAACCTAATTAATATACAAGAACGATAATAGAAACACGAGAAAGATAATAGAATGAAAGAGTGGGAGAAACCCAAGAAAAAAGAAAAGGAAAGATATAAAAAGCATTAAATTTGTTGATAATGGTAAATATAATAACAAATATATATTTTCATTAGTAATTCTCAAACATATTATGAAGTATCTAGTAAAGTTTACAATAGACATATTTATATATATTTAACCAAATTTAGAAATTAGAATTACCGAAGTAATTCGGTGAACATCTTTAATAGGGTGAAGCACCTTGACATAAGTGAGAACGAATTCGAGAGACGAAAGCAAGCTAATTTGGAGTTAGATAGAACTTCAGCTAAGGTCATTCAAGTAAGTGGCCTTACTATTGACATGGTTATATTTGATGTTGACACATGTCTAGTAGTTCTGCACATGTCATATATATTGATGTGTGAATTGTTTATAGATCGATGTGCTTATGATATGATATAATATGTTATAATATGTGAATTGTATGATAATACTTACAGTACATTGTGTTCGATGATACGTTTGAGATAGGATACGAGAAGGATGCACTAAACGTAATGTAACGATAGGAGTAAGATATGTTCATGAAATTTTGAGGTTAGGTTATGTATCGAAGTGCTATGGATATGAGAGGTTGATAAAAACGATATGGTCACGATCGATTGATAAAAGAATACGGTTTGGTTGTAGGTTGTTTTGCATTTCATTGTTTTAAATTATTTTGTATTTTTTTTTTCTCTAAATTTCAGTATTTCATATTTAAACACGTAAGACCATGGCTGTGTTTTCCAGAGAAGAGGTTGTTTTAAACGTTTTTTCGAAGTTTACGTTATCAACTATGTTCATGTAAGAGTTATATTTCCGCATTATAGATGAGCATGAGACGTTAGTAGCGACTCTGAGTATGTGGAAATTTAGGGTCGTTACATAAACAATATGTGAAATGATATGAAAAACGATATGATATGTACAGAACACTAGCGATGTTGTATTAAACAATAATGAAAATGGAAAAATATTAGAATAATGAAAATGGAAAAATATTAGGACCTCAAGGATTATTGTGTGCTTATGCATTGGGAGATACCCTTATTCCTTCACAATGGTACGGACGCATACACAAATAGGCAAAAGAACTATCAATATTTTTTACATAATGTTGTCGTGATGGTTACTAATTCTAACGGGTGTCTGGAACAAAGAGCTACCAGAGCATGCTCGCCCGACAAGGAAAGGGGCCCAGCAGTGTGCGAACTGACTGGTGAGTCCATACTCGTACGTATAGGCCATGTAGAGTATATGGTATACATCCAAGCTTCCCGTTAGGATAGTGCCGTAGGAAAATAGACTGATATGATAGGTCCCGTCATTGCATTCGCATGTTCTTGCATTTAACCCCTAATAGTGGGGTCCCTTGTTGAGTATTTCTTTAAATACTCAAGCCACGTGCTATTTCTATTTCAGGTTAAGGCAAGACATTCCTGTACGGCTAACGCTGACATTGTAACTGGAGACCATGTCAACTACATGGGGCAGCCTCATTTATTTTCTTAG

mRNA sequence

ATGAACGGTGCTGATTTGGTCGAGTTGGAAAATCAAATTCCTTTTTTTTGTTCTTCAACCTCCGTCCCCTTTATAAGACTTGCAATTCATTTCATCGATTTCTTAAGCTTCTTCTTCGTCCCCACGATACCTTCTAAGAACAATAGTAAAGAAGAAAAATCAATTATTCCTCCATCGATAACTGAGCTCCGCAAAGCCGGTGTCACCATCAAGAAAGCAGAAAATGCCAATGTGAGCTTCAAAAATGGGGTTTTTGAAATCTCACCCATACTTATTGATGATTACTTTGAAACCATGATGCAAAAACCTAATAGCAAAGATGTGAGTGTACTTGCAAAAGCCGGAATCATAATAAACGAAATTGGAGTCCCAAATTGTTGCAACTTCAACGATATTAACAAAGCTTTACGAGAACATTGCAGTAGACGATGGAACAAGGCGATAGCTACACTCAAACATAACTATTTCAATACGCCTTGGGCTATTGTCTCCTTGGTTAAGGCAAGACATTCCTGTACGGCTAACGCTGACATTGTAACTGGAGACCATGTCAACTACATGGGGCAGCCTCATTTATTTTCTTAG

Coding sequence (CDS)

ATGAACGGTGCTGATTTGGTCGAGTTGGAAAATCAAATTCCTTTTTTTTGTTCTTCAACCTCCGTCCCCTTTATAAGACTTGCAATTCATTTCATCGATTTCTTAAGCTTCTTCTTCGTCCCCACGATACCTTCTAAGAACAATAGTAAAGAAGAAAAATCAATTATTCCTCCATCGATAACTGAGCTCCGCAAAGCCGGTGTCACCATCAAGAAAGCAGAAAATGCCAATGTGAGCTTCAAAAATGGGGTTTTTGAAATCTCACCCATACTTATTGATGATTACTTTGAAACCATGATGCAAAAACCTAATAGCAAAGATGTGAGTGTACTTGCAAAAGCCGGAATCATAATAAACGAAATTGGAGTCCCAAATTGTTGCAACTTCAACGATATTAACAAAGCTTTACGAGAACATTGCAGTAGACGATGGAACAAGGCGATAGCTACACTCAAACATAACTATTTCAATACGCCTTGGGCTATTGTCTCCTTGGTTAAGGCAAGACATTCCTGTACGGCTAACGCTGACATTGTAACTGGAGACCATGTCAACTACATGGGGCAGCCTCATTTATTTTCTTAG

Protein sequence

MNGADLVELENQIPFFCSSTSVPFIRLAIHFIDFLSFFFVPTIPSKNNSKEEKSIIPPSITELRKAGVTIKKAENANVSFKNGVFEISPILIDDYFETMMQKPNSKDVSVLAKAGIIINEIGVPNCCNFNDINKALREHCSRRWNKAIATLKHNYFNTPWAIVSLVKARHSCTANADIVTGDHVNYMGQPHLFS
Homology
[Close]
BLAST of Cp4.1LG12g09870 vs. TrEMBL
Match: A0A0A0LM96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380080 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.4e-31
Identity = 99/252 (39.29%), Postives = 121/252 (48.02%), Query Frame = 1 

Query: 5   DLVELENQIPFFCSSTSVPFIR------------------------------LAI---HF 64
           DL++LENQ+PFF        I                               L+I   HF
Sbjct: 174 DLIKLENQLPFFVLQHLFDLIPKHNDNPNCFKQLTYKYLNMGWLENYEPSDILSIKPKHF 233

Query: 65  IDFLSFFFVPTIPSKNNS-----KEEKSIIPPSITELRKAGVTIKKAENA----NVSFKN 124
           IDFLSF+FVP    +++      KE   IIPPSITEL +AGVTIKKAEN     N+ F+N
Sbjct: 234 IDFLSFYFVPHHRCEHDQESSDMKEWNVIIPPSITELCEAGVTIKKAENTKCLMNIRFEN 293

Query: 125 GVFEISPILIDDYFETMMQK---------------------------PNSKDVSVLAKAG 169
           G+ EI P+ IDDYFE MM+                               KDV++L K  
Sbjct: 294 GILEIPPLHIDDYFEPMMRNLLAFEHFPVEVNNTYVIPYVTFMDYLISTEKDVNLLVKEK 353

[Close]
BLAST of Cp4.1LG12g09870 vs. TrEMBL
Match: A0A0A0LLX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380590 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-30
Identity = 96/252 (38.10%), Postives = 121/252 (48.02%), Query Frame = 1 

Query: 5   DLVELENQIPFFC------------------SSTSVPFIRLAI---------------HF 64
           DL++LENQ+PFF                      +  ++++                 HF
Sbjct: 203 DLIKLENQLPFFILQHLYDLIPKQDDNPKCFKELTCKYLKMGWLENYEPSDIQSIEPKHF 262

Query: 65  IDFLSFFFVPTIPSKNNSK-----EEKSIIPPSITELRKAGVTIKKAENA----NVSFKN 124
           IDFLSF+FVP    +++ K     E   IIPPSITEL +AGVTIKKAEN     N+ FKN
Sbjct: 263 IDFLSFYFVPHHRCEHDKKSSDLEEWNVIIPPSITELFEAGVTIKKAENTKCLMNIKFKN 322

Query: 125 GVFEISPILIDDYFETMMQK---------------------------PNSKDVSVLAKAG 169
           G+ EI P+ IDDYFE MM+                                DV++L K  
Sbjct: 323 GILEIPPLHIDDYFEPMMRDLLAFEHFPIEVQNTYVIPYITFMDYLISTENDVNLLVKEK 382

[Close]
BLAST of Cp4.1LG12g09870 vs. TrEMBL
Match: A0A0A0LSF4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380060 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.4e-25
Identity = 91/281 (32.38%), Postives = 117/281 (41.64%), Query Frame = 1 

Query: 5   DLVELENQIPFFC----------SSTSVPFIRLAI------------------------- 64
           DL++LENQ+PFF            +  V FI L                           
Sbjct: 213 DLIKLENQVPFFLLQHVFDMIPRHNLHVSFIDLTYCALRIGFIFNYKIYSFDYDFVKKDL 272

Query: 65  -HFIDFLSFFFVPTI-------------------------------PSKNNSKEEKSIIP 124
            H + FLS +F+P                                 P K NS +E  + P
Sbjct: 273 KHLVHFLSLYFIPPPTTNDMIQNKKKNNYSFLSFFSRLLCCELCQNPDKENSDQE-FLSP 332

Query: 125 PSITELRKAGVTIKKAENA----NVSFKNGVFEISPILIDDYFETMMQK----------- 169
           PSITEL ++GVT+KKA+N     N++F NGV EI P+ I D FE + +            
Sbjct: 333 PSITELNESGVTVKKAKNVESLMNITFTNGVLEIPPLNICDEFELLFRNLVAFEQFQAGN 392

[Close]
BLAST of Cp4.1LG12g09870 vs. TrEMBL
Match: A0A0A0LQ57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380610 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 8.3e-24
Identity = 74/197 (37.56%), Postives = 99/197 (50.25%), Query Frame = 1 

Query: 30  HFIDFLSFFFVPTIPSKNNSK-------EEKSIIPPSITELRKAGVTIKKAENAN----- 89
           H +DFLSF+F+P  P+  N K       ++  + PP+ TEL +AGVTIK A+  N     
Sbjct: 258 HLLDFLSFYFLPVPPNNWNRKFDHVKISKQWRLSPPTTTELCEAGVTIKVAKRKNNLCFM 317

Query: 90  -VSFKNGVFEISPILIDDYFETMMQK---------------------------PNSKDVS 149
            +SFKNGV EI PI+I+  FE +++                               KD+ 
Sbjct: 318 NISFKNGVLEIPPIVIEGTFEVLIRNVLAFEIFPAGNQKKYAIQYVTFLDDLISTEKDLC 377

Query: 150 VLAKAGIIINEIG------------------VPNCCNFNDINKALREHCSRRWNKAIATL 169
           +L KAG+IIN+ G                   P    F+D +KALR HC   WNKA A+L
Sbjct: 378 LLVKAGVIINDTGGSDKEVSELFNSLTKLVTTPLPSYFDDTSKALRVHCDGSWNKAKASL 437

[Close]
BLAST of Cp4.1LG12g09870 vs. TrEMBL
Match: A0A0A0LQ64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381630 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.4e-23
Identity = 74/175 (42.29%), Postives = 89/175 (50.86%), Query Frame = 1 

Query: 48  NSKEEKSIIPPSITELRKAGVTIKKAEN----ANVSFKNGVFEISPILIDDYFETMMQK- 107
           N  E+K  IPPSITEL +AGVT KK +      N++FKNGV EI PI+ID YFET+ +  
Sbjct: 320 NDHEKKMYIPPSITELSEAGVTFKKPKKLPIITNITFKNGVLEIPPIVIDHYFETITRNL 379

Query: 108 --------------------------PNSKDVSVLAKAGIIINEIG-----VPNCCN--- 167
                                        KDVS+L KAGII+N+IG     V    N   
Sbjct: 380 IAYEHMDKIYKEMKVISYILFMDYLISTEKDVSLLEKAGIIVNDIGGSHKEVSKLFNNLS 439

Query: 168 ---------------FNDINKALREHCSRRWNKAIATLKHNYFNTPWAIVSLVKA 169
                          F  I+KAL EH  RRWNK  A+LKHNYFNTPWA +S+  A
Sbjct: 440 KFVNRSDNNSEYFKKFQGISKALCEHRDRRWNKLKASLKHNYFNTPWASISVFAA 494

[Close]
BLAST of Cp4.1LG12g09870 vs. TAIR10
Match: AT3G50160.1 (AT3G50160.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 55.1 bits (131), Expect = 5.7e-08
Identity = 60/244 (24.59%), Postives = 88/244 (36.07%), Query Frame = 1 

Query: 5   DLVELENQIPFFCSSTSVPFIR---LAIHFIDFLSFFFVPTIP----------------- 64
           D+V LENQ+P+      +   R   L    +     FF P +P                 
Sbjct: 235 DMVMLENQLPWSVLKGLLQLQRPDVLDKVNVQLFQPFFQPLLPTREVLTEEGGLHCLDVL 294

Query: 65  ------SKNNSKEEKSIIPPS-------ITELRKAGVTIKKAENAN---VSFKNGVFEIS 124
                 S   S E+ S++          +TELR AGV   + E  +   + FKNG  +I 
Sbjct: 295 RRGLLQSSGTSDEDMSMVNKQPQQLIHCVTELRNAGVEFMRKETGHFWDIEFKNGYLKIP 354

Query: 125 PILIDDYFETMMQK--------------------------PNSKDVSVLAKAGIIINEIG 169
            +LI D  +++                              +S+DVS L   GII N +G
Sbjct: 355 KLLIHDGTKSLFLNLIAFEQCHIKSSKKITSYIIFMDNLINSSEDVSYLHHYGIIENWLG 414

[Close]
BLAST of Cp4.1LG12g09870 vs. NCBI nr
Match: gi|700207809|gb|KGN62928.1| (hypothetical protein Csa_2G380080 [Cucumis sativus])

HSP 1 Score: 142.5 bits (358), Expect = 7.7e-31
Identity = 99/252 (39.29%), Postives = 121/252 (48.02%), Query Frame = 1 

Query: 5   DLVELENQIPFFCSSTSVPFIR------------------------------LAI---HF 64
           DL++LENQ+PFF        I                               L+I   HF
Sbjct: 174 DLIKLENQLPFFVLQHLFDLIPKHNDNPNCFKQLTYKYLNMGWLENYEPSDILSIKPKHF 233

Query: 65  IDFLSFFFVPTIPSKNNS-----KEEKSIIPPSITELRKAGVTIKKAENA----NVSFKN 124
           IDFLSF+FVP    +++      KE   IIPPSITEL +AGVTIKKAEN     N+ F+N
Sbjct: 234 IDFLSFYFVPHHRCEHDQESSDMKEWNVIIPPSITELCEAGVTIKKAENTKCLMNIRFEN 293

Query: 125 GVFEISPILIDDYFETMMQK---------------------------PNSKDVSVLAKAG 169
           G+ EI P+ IDDYFE MM+                               KDV++L K  
Sbjct: 294 GILEIPPLHIDDYFEPMMRNLLAFEHFPVEVNNTYVIPYVTFMDYLISTEKDVNLLVKEK 353

[Close]
BLAST of Cp4.1LG12g09870 vs. NCBI nr
Match: gi|659088838|ref|XP_008445188.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo])

HSP 1 Score: 141.7 bits (356), Expect = 1.3e-30
Identity = 99/253 (39.13%), Postives = 123/253 (48.62%), Query Frame = 1 

Query: 5   DLVELENQIPFFCSSTSVPFIR------------------------------LAI---HF 64
           DL++LENQ+PFF        I                               L+I   HF
Sbjct: 209 DLIKLENQLPFFVLQHLFDLIPKHKDAPNCFKQLTYEYLTMGWLENYEPSDILSIKPKHF 268

Query: 65  IDFLSFFFVPTIP----SKNNSKEEKSII-PPSITELRKAGVTIKKAEN-----ANVSFK 124
           IDFLSF+ VP        K+N +EE +II PPSITE+ +AGVTIKKA+       N+ F+
Sbjct: 269 IDFLSFYLVPEHQYEHDQKSNDEEEWNIIIPPSITEICEAGVTIKKADKNTKCLLNIRFE 328

Query: 125 NGVFEISPILIDDYFETMMQK---------------------------PNSKDVSVLAKA 169
           NG+ EI P+ IDDYFE MM+                               KDV++L K 
Sbjct: 329 NGILEIPPLHIDDYFEPMMRNLLAFEHFPVEVKNTYVIPYLTFMDYLIITEKDVNLLVKE 388

[Close]
BLAST of Cp4.1LG12g09870 vs. NCBI nr
Match: gi|778674379|ref|XP_011650197.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus])

HSP 1 Score: 141.4 bits (355), Expect = 1.7e-30
Identity = 96/252 (38.10%), Postives = 121/252 (48.02%), Query Frame = 1 

Query: 5   DLVELENQIPFFC------------------SSTSVPFIRLAI---------------HF 64
           DL++LENQ+PFF                      +  ++++                 HF
Sbjct: 203 DLIKLENQLPFFILQHLYDLIPKQDDNPKCFKELTCKYLKMGWLENYEPSDIQSIEPKHF 262

Query: 65  IDFLSFFFVPTIPSKNNSK-----EEKSIIPPSITELRKAGVTIKKAENA----NVSFKN 124
           IDFLSF+FVP    +++ K     E   IIPPSITEL +AGVTIKKAEN     N+ FKN
Sbjct: 263 IDFLSFYFVPHHRCEHDKKSSDLEEWNVIIPPSITELFEAGVTIKKAENTKCLMNIKFKN 322

Query: 125 GVFEISPILIDDYFETMMQK---------------------------PNSKDVSVLAKAG 169
           G+ EI P+ IDDYFE MM+                                DV++L K  
Sbjct: 323 GILEIPPLHIDDYFEPMMRDLLAFEHFPIEVQNTYVIPYITFMDYLISTENDVNLLVKEK 382

[Close]
BLAST of Cp4.1LG12g09870 vs. NCBI nr
Match: gi|659088836|ref|XP_008445187.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo])

HSP 1 Score: 132.1 bits (331), Expect = 1.0e-27
Identity = 90/255 (35.29%), Postives = 120/255 (47.06%), Query Frame = 1 

Query: 5   DLVELENQIPFFC---------------------------------SSTSVPFIRLAIHF 64
           DL++LENQ+PFF                                   +  +   +   HF
Sbjct: 187 DLIKLENQVPFFLLQYLFDLIPKHDISMMISSFRDLTLRALKFRLVRTYEINLFKEPKHF 246

Query: 65  IDFLSFFFVPTIPSKNNSK--------EEKSI-IPPSITELRKAGVTIKKAENA----NV 124
           +D L+F+FVP+   K N++        EEK+  IPPSITELR+AGVTIKKAE A    ++
Sbjct: 247 VDLLTFYFVPSAGQKVNNQHGIFKSTIEEKNRWIPPSITELREAGVTIKKAEKAKHLTDI 306

Query: 125 SFKNGVFEISPILIDDYFETMMQK---------------------------PNSKDVSVL 169
           +FKNGV  I P+ I D FE +++                               KDV +L
Sbjct: 307 TFKNGVLRIPPLHIYDEFELVLRNMVAFEQISARKMNKYVIQYVLFMDDLISTEKDVRLL 366

[Close]
BLAST of Cp4.1LG12g09870 vs. NCBI nr
Match: gi|449442190|ref|XP_004138865.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus])

HSP 1 Score: 123.2 bits (308), Expect = 4.8e-25
Identity = 91/281 (32.38%), Postives = 117/281 (41.64%), Query Frame = 1 

Query: 5   DLVELENQIPFFC----------SSTSVPFIRLAI------------------------- 64
           DL++LENQ+PFF            +  V FI L                           
Sbjct: 213 DLIKLENQVPFFLLQHVFDMIPRHNLHVSFIDLTYCALRIGFIFNYKIYSFDYDFVKKDL 272

Query: 65  -HFIDFLSFFFVPTI-------------------------------PSKNNSKEEKSIIP 124
            H + FLS +F+P                                 P K NS +E  + P
Sbjct: 273 KHLVHFLSLYFIPPPTTNDMIQNKKKNNYSFLSFFSRLLCCELCQNPDKENSDQE-FLSP 332

Query: 125 PSITELRKAGVTIKKAENA----NVSFKNGVFEISPILIDDYFETMMQK----------- 169
           PSITEL ++GVT+KKA+N     N++F NGV EI P+ I D FE + +            
Sbjct: 333 PSITELNESGVTVKKAKNVESLMNITFTNGVLEIPPLNICDEFELLFRNLVAFEQFQAGN 392

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g09870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG12g09870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LM96_CUCSA5.4e-3139.29Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380080 PE=4 SV=1[more]
A0A0A0LLX1_CUCSA1.2e-3038.10Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380590 PE=4 SV=1[more]
A0A0A0LSF4_CUCSA3.4e-2532.38Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380060 PE=4 SV=1[more]
A0A0A0LQ57_CUCSA8.3e-2437.56Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380610 PE=4 SV=1[more]
A0A0A0LQ64_CUCSA2.4e-2342.29Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381630 PE=4 SV=1[more]
BLAST of Cp4.1LG12g09870 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G50160.15.7e-0824.59 Plant protein of unknown function (DUF247)[more]
BLAST of Cp4.1LG12g09870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700207809|gb|KGN62928.1|7.7e-3139.29hypothetical protein Csa_2G380080 [Cucumis sativus][more]
gi|659088838|ref|XP_008445188.1|1.3e-3039.13PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo][more]
gi|778674379|ref|XP_011650197.1|1.7e-3038.10PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus][more]
gi|659088836|ref|XP_008445187.1|1.0e-2735.29PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo][more]
gi|449442190|ref|XP_004138865.1|4.8e-2532.38PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004158DUF247_pln
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g09870.1Cp4.1LG12g09870.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004158Protein of unknown function DUF247, plantPFAMPF03140DUF247coord: 114..168
score: 2.1E-6coord: 5..100
score: 3.
NoneNo IPR availablePANTHERPTHR31549FAMILY NOT NAMEDcoord: 5..166
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g09870Cucurbita pepo (Zucchini)cpecpeB175
Cp4.1LG12g09870Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g09870Cucurbita maxima (Rimu)cmacpeB910
Cp4.1LG12g09870Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g09870Cucurbita moschata (Rifu)cmocpeB846
Cp4.1LG12g09870Silver-seed gourdcarcpeB0121