Cp4.1LG12g08440 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGTGCATGGTCAAGTATTTAAAAGTTTTTATCTTTTCAAAATAAATTATGCTAATAGTCCCTAGTAAAGGAATTAGGGTGGCCATCATAAACACAAAAATCAAGCTTTTCAGAGGCCTGCAGTTTCTAGAGCGTCAGCTGACCAAATTCCTAACTAAAAATGCCAACTTTCCCTTCTTTCTCTAGCTCGGTTAGTACCTACTAACTTCATATGCCCTGAAAACTTGGAATGGACCTTTCCTTTCTTTTCTAACCAATTCTACACTTTCTGAAAATTCTCGCCATCTTTGGCCTGAGGGGTAGGGTCTAGTTTTTTTTATTAATTTTTTTACCGGGTAAGTGTGAGATCCCACATTAATTAGAGAGGAGAACGAGTGCCAACAAGGACGCTGGGCTCCAACGGGGGTGGACTCGTCCCACATCGGTTGGGAAAGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTTTCTCTAGCCGACACATTTTAAAAAACCTTGAGGAAAAGCCTGAAAGGAAAAAGCCCAAGGACGACAATATTTTGTTATCAATGGGTTTGAGCGGTTATAGTAACTTTCTTTTGTTTTTCTTTTTTATCAAATCTTTCAGTTTCTGAAACTTTAGAAGACTGGTGAGAGAGAACTTTAAAATCTTACCTTTCTTACCTTTTTATATTTAAAAAATGGAGCCATGTGCCCTCTCCTTCCGTTTTTGCTCCGCTCCTATTTGGCTCACCATTCTCCTTTTCAGACGAGTAAGAGTTTGCATCTTGGTTCATTTTACATCTGGAAGTAAACTAGGTTGGCAAACGCCGGGAATGAATTTTTGAGTTATCCTTGCCATTGTCTAGCTTGCTGTGACGGATCTTGAATTGACAGGATATTGATTTGGAAGCTTTGCGGATTTTACACGTTTGTTATGAGCGTGCAAAAGAGGTACCATAATTTTTCTAGGAAGTTCAAACGAACAATCATACAAAATTTCTTCATACTTATAATGCGACATTTTAATCTCCTTGTTTCTTGTATTTTATAGATTTTGCAACAGAACAGGAAGCTCATGGATGTGGTGATTGATGATCTTATTCAAAAGAAAAGTTTAACAAAAAATGAATTCCTCCATTTGGTCGAGTTGCACGGCTCGATCAAACCACCGCCTCCAAGCATCATCGACCTTCGAATCGCCAAACGAACCAAGCTTCAGGAGGTGGAGAAGATGAAGAAGAACCAAAAGAAAATAGCGGTAGGCATCAGCAATACCTCATAA ATGGCGGATATTGATTTGGAAGCTTTGCGGATTTTACACGTTTGTTATGAGCGTGCAAAAGAGATTTTGCAACAGAACAGGAAGCTCATGGATGTGGTGATTGATGATCTTATTCAAAAGAAAAGTTTAACAAAAAATGAATTCCTCCATTTGGTCGAGTTGCACGGCTCGATCAAACCACCGCCTCCAAGCATCATCGACCTTCGAATCGCCAAACGAACCAAGCTTCAGGAGGTGGAGAAGATGAAGAAGAACCAAAAGAAAATAGCGGTAGGCATCAGCAATACCTCATAA ATGGCGGATATTGATTTGGAAGCTTTGCGGATTTTACACGTTTGTTATGAGCGTGCAAAAGAGATTTTGCAACAGAACAGGAAGCTCATGGATGTGGTGATTGATGATCTTATTCAAAAGAAAAGTTTAACAAAAAATGAATTCCTCCATTTGGTCGAGTTGCACGGCTCGATCAAACCACCGCCTCCAAGCATCATCGACCTTCGAATCGCCAAACGAACCAAGCTTCAGGAGGTGGAGAAGATGAAGAAGAACCAAAAGAAAATAGCGGTAGGCATCAGCAATACCTCATAA MADIDLEALRILHVCYERAKEILQQNRKLMDVVIDDLIQKKSLTKNEFLHLVELHGSIKPPPPSIIDLRIAKRTKLQEVEKMKKNQKKIAVGISNTS
BLAST of Cp4.1LG12g08440 vs. Swiss-Prot
Match: FTSI2_ARATH (Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic OS=Arabidopsis thaliana GN=FTSHI2 PE=1 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.2e-21 Identity = 52/77 (67.53%), Postives = 65/77 (84.42%), Query Frame = 1
BLAST of Cp4.1LG12g08440 vs. Swiss-Prot
Match: FTSH_CYACA (ATP-dependent zinc metalloprotease FtsH OS=Cyanidium caldarium GN=ftsH PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.5e-06 Identity = 24/53 (45.28%), Postives = 39/53 (73.58%), Query Frame = 1
BLAST of Cp4.1LG12g08440 vs. TrEMBL
Match: A0A0A0K9T4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G453510 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 5.6e-29 Identity = 76/95 (80.00%), Postives = 81/95 (85.26%), Query Frame = 1
BLAST of Cp4.1LG12g08440 vs. TrEMBL
Match: A0A067KXF1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24880 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 4.4e-26 Identity = 61/82 (74.39%), Postives = 72/82 (87.80%), Query Frame = 1
BLAST of Cp4.1LG12g08440 vs. TrEMBL
Match: A0A061GII6_THECC (Cell division protein ftsH, putative isoform 1 OS=Theobroma cacao GN=TCM_028857 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 6.4e-25 Identity = 62/93 (66.67%), Postives = 76/93 (81.72%), Query Frame = 1
BLAST of Cp4.1LG12g08440 vs. TrEMBL
Match: A0A059CJN7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02583 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.4e-24 Identity = 62/90 (68.89%), Postives = 73/90 (81.11%), Query Frame = 1
BLAST of Cp4.1LG12g08440 vs. TrEMBL
Match: F6HYC2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g03880 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 2.4e-24 Identity = 61/90 (67.78%), Postives = 74/90 (82.22%), Query Frame = 1
BLAST of Cp4.1LG12g08440 vs. TAIR10
Match: AT3G16290.1 (AT3G16290.1 AAA-type ATPase family protein) HSP 1 Score: 103.6 bits (257), Expect = 7.0e-23 Identity = 52/77 (67.53%), Postives = 65/77 (84.42%), Query Frame = 1
BLAST of Cp4.1LG12g08440 vs. NCBI nr
Match: gi|449447797|ref|XP_004141654.1| (PREDICTED: uncharacterized protein LOC101211900 [Cucumis sativus]) HSP 1 Score: 134.8 bits (338), Expect = 8.0e-29 Identity = 76/95 (80.00%), Postives = 81/95 (85.26%), Query Frame = 1
BLAST of Cp4.1LG12g08440 vs. NCBI nr
Match: gi|700190366|gb|KGN45599.1| (hypothetical protein Csa_7G453510 [Cucumis sativus]) HSP 1 Score: 134.8 bits (338), Expect = 8.0e-29 Identity = 76/95 (80.00%), Postives = 81/95 (85.26%), Query Frame = 1
BLAST of Cp4.1LG12g08440 vs. NCBI nr
Match: gi|802577649|ref|XP_012069110.1| (PREDICTED: ATP-dependent zinc metalloprotease FtsH [Jatropha curcas]) HSP 1 Score: 125.2 bits (313), Expect = 6.4e-26 Identity = 61/82 (74.39%), Postives = 72/82 (87.80%), Query Frame = 1
BLAST of Cp4.1LG12g08440 vs. NCBI nr
Match: gi|590619319|ref|XP_007024267.1| (Cell division protein ftsH, putative isoform 1 [Theobroma cacao]) HSP 1 Score: 121.3 bits (303), Expect = 9.2e-25 Identity = 62/93 (66.67%), Postives = 76/93 (81.72%), Query Frame = 1
BLAST of Cp4.1LG12g08440 vs. NCBI nr
Match: gi|702328773|ref|XP_010054037.1| (PREDICTED: ATP-dependent zinc metalloprotease FtsH [Eucalyptus grandis]) HSP 1 Score: 120.2 bits (300), Expect = 2.0e-24 Identity = 62/90 (68.89%), Postives = 73/90 (81.11%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |