Cp4.1LG12g08360 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g08360
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionProtein UXT like
LocationCp4.1LG12 : 6476962 .. 6480688 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTCACGGTCTCTGCGTCTCCGAGGGGGTAGGTTCTTCGACAATCCCAGCCGGACGCTCACCGTTAGTCGCAGCAACCGCATACAGCTTCTCCTCGCCGTCGCCGTCGCCGTCGTTCGTAGCATCCACTCAGCATTTAGTTATTGTATGTAGAGACAACTTCTCCTCTGCTTCAGCCGCGTTGATTCTCCATAGGTATGACGTACTGCTTTTACAACTTTACTCAATGTTATAGTTCATACTCACACTGCTCGCCATTGTCTAACAGTCTTCAAGCTTTTTAGTTGTTATATATGACGATTACATTGGATAAGTTCTTCCATCAACCAAATTTTATATCTAATCGCATTGGGGTCAGATAATTGTCGACCTTTTTGTTTTTATTTATGAGTAAATTATTAGAGCATTTTATTTTCTAAATTAGGCTGTAATTGATGGGTAAATGCCTAATTAAAAGGATTTTAGAAAAAAGGAAGAAAAAAAACTGAACTCAATTGTGGAAAGGTAGTAGGAACATGAGATGAAGCAGATAGATTAAGAAGCCAAAGAATCTTGATGATGAAGGTTCTATGCAAGGATGAACTAACAAATCACAGATAGAGAAGGGGATATTGAAAACCAAAGGGTTTAGAAAGAAAGAAAAGAAAAATCTTGGAGATTGAATTGCGCTCACTTTCCCTTGGAGAAGAGATGAAAACGTATTGGACTGAACAATTCTAAAATGTTTAACTGACCATATTAATGTCTTTTTTACCATTTTTTCGTCAATTACTAACTTTCGTACAAACTTGTTAGCATTGTTTGTATGGAATTTAAGATCTCGATTGTTCCTGTTAAATTCATAAGGTTCGGGTCAGTGACTGATTGTTTTAGGAACTCATGTACGTTTATCCAGCTAAGATCTCGATTTTTGCTGTTAAATTCATTTGAATGTCGATTTCAAAATAAACCCAATTTTCATTCAGTACTTTTGAATCTTGGGTCTATGTTAAATTCAGGTCTCCTAAATGTTTGTTTTGTTTCTAACAAATGCAAACCAACCCAACTAAATTGGTAAATAGCCCATAAATTATTGATGGATTGTTGATATTTTTCCCCTCCATGCAGTTAGGTAAATTGTTTGGAATTTTAAATATAACTCTCCAGATAACCAAAATGTACATTTGTGTATGCAGGAGGATAGAAGTTTTGCCACTTTGTTGTTGATAACTATTTTAGAACATCCACAAGGCTGTCACGATCAGTTGGTGGTTATTGATCATGGATGTAGGAATTGATAACTTTCGGAATGAGAAAGTTCAAAGGTTTGAGGAATTTGTTGACCGTCGCTTGAAACCTGATTTGGTGCATGCAATCGCTGAAAGGTATGCATTTGTTTCAGATTCTCAACTTCATGCATTTTGAAGGATCCCAATGAAGCATTTACTATCTGACGATATATAGAATGTTCATCTAAATTGATGTTACAATTTTCTATCTAGCGATATATAGATTGTTGATGGACATTAATGTGGACTTTGAGTACTTTGTTGGTTGAATGTTTTTTCATTGCTTGGTTTTTAGACAATTTTAAAATTTAGTTTTGATGAAATTTAATTTCACTATTTATTCAAGCTCAAAATTTAAGTAGTAAAATTTCTTATAAAACTATTTATTTTGTACATATGAAAATGCAAGCATAAAGTACAATGATGAAAATGAAATTTCTCAAAATGTTCTTTTTGTGCCCCATACATTGAATTGATTCCCTGCAAACAAACAATGTCAAAGATTAGTTATTTCTTTAATTTGGGAGTTTTATAGGATCTTGGGACGAGGAAAGGAAGAAAAATATGATTGTTTGCGAGTATTTTTGAAAACTTGAGAGATGTAAAACTCATTTAACTGTTTTTTCTATATTGTTTGTTGTTTGGCAGGGACAAAGTGTTTGAGCAGCAGAAGGTGTTGTATCCTTTTCAATTCATTTGAAGCCTCCTCAGATTTATGGCTTCACTTCATTCCCAATTATCCGACATACTTCTGTCGCTTGTGTTTTGTTGCATTGTCGATGGTATTTATGATGTTTAACACTTAACATTTCTTTACCATTAGTTCAGACCTTCGTCGAAACATTGAGAATTTGGAGAAAAATAGTATAACTAATCTCACAACGTTGGTCAATCTTGGCTCTGAAGTCTATGTACAAGGCAATGTGTAAGTTTTTCTTACCGAACTAGATAATGAATCTGGTGGCCCTTTTTTTAATTTTCCTTTTACCATCTGTTAGCATTTGGGCCACCTCGGGTGCCTGTTATATTTGGTTGTCAGAAAACTTGAAGGATTTTAATATTCTAGATAGGTGGCAATCATAGAGTTTAGATTCATTTGCTCTAGTGCCCTGTTACTTTATTGCTAGTCCCATTGTATATTAGGTCATCCTTTGGCGGTTAGATTAGATATCAAGCTATTTGGGAGTTATTATGTTTTTCTTATTTTTTATCTTTCAAAAGAATCAAAGGGAACAATAACTCCCATGTAGTTTTAGGTGATAGGACCCTCCTCCCCCCTCTTGAGCGCACTAAAAGCCTAAACAACGACAATATTGCCTATGTTTTCATTTCCCTTATTTATAATCAATTCCTAATAAGAAACTTTTTAGCTAAATGACCAACCTTAGTATCATAGTACTAATATTTCAAATGTCAAAATACAATTCTAGTCCCCAATCTTTTAGCTAAATGATGGGTTGTTCCAAATATTGCCCAAAATGAGCTATTCTATGGGTTAATTCACTCTTTAAAAAGGGTGATCCATATCCATTCCAATTAATGGTTTGATTGGGTTGAGTCAGATGGGTTAAACTTTGACTTCGGGCTGAATTTGGTTCGAGCCAAAGCCAAGACGCGATGAGCCCCCATTTAATTTACCTTTCTCAGGCGAATTTACTCGATTATGATTTGCACTTTTACAGGGCAGATACACAAAGAATATTTGTAGATGTTGGGCTCGGGTTTCACGTGGAGTTCACGTGGTCTGAAGCTTTAAAGTTCATTTCTCTCAAAGAAGAAAGGTTAGCCAGGTAAGTGTTTTAACAAGCATTGCCGGTGTGGTTCAGACTAGTGCTTGAACACGCAAGTGCTAGGATCTTATGTTCCTTCAAGGTTTCAAATTTTCGTTTATTTAAGAGCCTGTATATGTTTTTGCTGTAACCACGCAGACAGATAGAAGAATACACTCATTTAATTGCATCAATTAAAGCGCAGATCAAGTTGGTATGCATTTCATACTTCAAAATTTTCCATTAATCAAATATTCATACTTCTGGGATCCTAAAACTTCCATTCATGCCCCTTTTAAGCTACTTTTTTTAATTTTTCATTTGGAAGACAAGTGGGGTTGGTGAGAGGTGTTCATACGAGTATTTGAACATTTGATTTGCAGGTTTGTGAAGGGATTCGTGAATTATTACAACTTCCAGCAGAGAAGACTGTGGAAGGACATGTATTTTAAGTTCCGTTCCTCATAGTTCCTCCTTTTCTGGGAATGAAGATGGTCCTGAAGAATCACTGCTCTGTGTATAAAACCCGTAATTTTTATGCTTTTTGTAAACTTGTTCATCTTTTAGAATTTAAGAAGAAAGATGGCTAATGAAAATACTGCGCCACCTTATCTGACAATGGCAGAGTACACTTTCATGAACTTGAAAAAATTATGAATGGAATTAGATTGCATGCTTATTAAGTGCCCAA

mRNA sequence

GCTCACGGTCTCTGCGTCTCCGAGGGGGTAGGTTCTTCGACAATCCCAGCCGGACGCTCACCGTTAGTCGCAGCAACCGCATACAGCTTCTCCTCGCCGTCGCCGTCGCCGTCGTTCGTAGCATCCACTCAGCATTTAGTTATTGTATGTAGAGACAACTTCTCCTCTGCTTCAGCCGCGTTGATTCTCCATAGGAGGATAGAAGTTTTGCCACTTTGTTGTTGATAACTATTTTAGAACATCCACAAGGCTGTCACGATCAGTTGGTGGTTATTGATCATGGATGTAGGAATTGATAACTTTCGGAATGAGAAAGTTCAAAGGTTTGAGGAATTTGTTGACCGTCGCTTGAAACCTGATTTGGTGCATGCAATCGCTGAAAGGGACAAAGTGTTTGAGCAGCAGAAGGTGTTTTCAGACCTTCGTCGAAACATTGAGAATTTGGAGAAAAATAGTATAACTAATCTCACAACGTTGGTCAATCTTGGCTCTGAAGTCTATGTACAAGGCAATGTGGCAGATACACAAAGAATATTTGTAGATGTTGGGCTCGGGTTTCACGTGGAGTTCACGTGGTCTGAAGCTTTAAAGTTCATTTCTCTCAAAGAAGAAAGGTTAGCCAGACAGATAGAAGAATACACTCATTTAATTGCATCAATTAAAGCGCAGATCAAGTTGGTTTGTGAAGGGATTCGTGAATTATTACAACTTCCAGCAGAGAAGACTGTGGAAGGACATGTATTTTAAGTTCCGTTCCTCATAGTTCCTCCTTTTCTGGGAATGAAGATGGTCCTGAAGAATCACTGCTCTGTGTATAAAACCCGTAATTTTTATGCTTTTTGTAAACTTGTTCATCTTTTAGAATTTAAGAAGAAAGATGGCTAATGAAAATACTGCGCCACCTTATCTGACAATGGCAGAGTACACTTTCATGAACTTGAAAAAATTATGAATGGAATTAGATTGCATGCTTATTAAGTGCCCAA

Coding sequence (CDS)

ATGGATGTAGGAATTGATAACTTTCGGAATGAGAAAGTTCAAAGGTTTGAGGAATTTGTTGACCGTCGCTTGAAACCTGATTTGGTGCATGCAATCGCTGAAAGGGACAAAGTGTTTGAGCAGCAGAAGGTGTTTTCAGACCTTCGTCGAAACATTGAGAATTTGGAGAAAAATAGTATAACTAATCTCACAACGTTGGTCAATCTTGGCTCTGAAGTCTATGTACAAGGCAATGTGGCAGATACACAAAGAATATTTGTAGATGTTGGGCTCGGGTTTCACGTGGAGTTCACGTGGTCTGAAGCTTTAAAGTTCATTTCTCTCAAAGAAGAAAGGTTAGCCAGACAGATAGAAGAATACACTCATTTAATTGCATCAATTAAAGCGCAGATCAAGTTGGTTTGTGAAGGGATTCGTGAATTATTACAACTTCCAGCAGAGAAGACTGTGGAAGGACATGTATTTTAA

Protein sequence

MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLTTLVNLGSEVYVQGNVADTQRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTHLIASIKAQIKLVCEGIRELLQLPAEKTVEGHVF
Homology
[Close]
BLAST of Cp4.1LG12g08360 vs. Swiss-Prot
Match: UXT_DICDI (Protein UXT homolog OS=Dictyostelium discoideum GN=DDB_G0285389 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-22
Identity = 56/136 (41.18%), Postives = 88/136 (64.71%), Query Frame = 1 

Query: 9   RNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLTTLVN 68
           R + ++ +E F++  L  DL  +I +R+KV E  + + +L+ NIE L +N + ++ T++N
Sbjct: 25  RLDSIKYYETFINETLNVDLNKSIEDREKVLENLENYLELKSNIELLIENKMDSMKTMIN 84

Query: 69  LGSEVYVQGNVADTQRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTHLIASIK 128
           LGSE YV+  V DT  I+VD+GLG HV++T  EA+KFI+ KE  L + +E  T  I  IK
Sbjct: 85  LGSECYVKARVQDTSYIYVDIGLGIHVKYTLEEAIKFINEKETFLNKTVENQTKKINQIK 144

Query: 129 AQIKLVCEGIRELLQL 145
            +I L+  G++EL  L
Sbjct: 145 TKIDLIQNGLKELKHL 160

[Close]
BLAST of Cp4.1LG12g08360 vs. Swiss-Prot
Match: UXT_RAT (Protein UXT OS=Rattus norvegicus GN=Uxt PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.6e-18
Identity = 55/131 (41.98%), Postives = 76/131 (58.02%), Query Frame = 1 

Query: 11  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLTTLVNLG 70
           EKV R+E F+   L+ DL   +  RDKV+EQ  V+  LR  IE L++ + + L   V+LG
Sbjct: 15  EKVLRYEAFISDVLQRDLQKVLDHRDKVYEQLSVYLQLRNVIERLQETNHSELYMQVDLG 74

Query: 71  SEVYVQGNVADTQRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTHLIASIKAQ 130
              +V   V DT RI+V +G GF +E T +EALKFI  K   L    +  T    +IKA 
Sbjct: 75  CNFFVDTMVPDTSRIYVALGYGFFLELTLAEALKFIDRKSSLLTELSDSLTKDSMNIKAN 134

Query: 131 IKLVCEGIREL 142
           I ++ EG+REL
Sbjct: 135 IHMMLEGLREL 145

[Close]
BLAST of Cp4.1LG12g08360 vs. Swiss-Prot
Match: UXT_MOUSE (Protein UXT OS=Mus musculus GN=Uxt PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 6.0e-18
Identity = 55/131 (41.98%), Postives = 76/131 (58.02%), Query Frame = 1 

Query: 11  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLTTLVNLG 70
           EKV R+E F+   L+ DL   +  RDKV+EQ  V+  LR  IE L++ + + L   V+LG
Sbjct: 15  EKVLRYETFISDVLQRDLQKVLDHRDKVYEQLSVYLQLRNVIERLQETNHSELYMQVDLG 74

Query: 71  SEVYVQGNVADTQRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTHLIASIKAQ 130
              +V   V DT RI+V +G GF +E T +EALKFI  K   L    +  T    +IKA 
Sbjct: 75  CNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFIDRKSSLLTELSDSLTKDSMNIKAH 134

Query: 131 IKLVCEGIREL 142
           I ++ EG+REL
Sbjct: 135 IHMMLEGLREL 145

[Close]
BLAST of Cp4.1LG12g08360 vs. Swiss-Prot
Match: UXT_NEMVE (Protein UXT homolog OS=Nematostella vectensis GN=v1g140887 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.7e-17
Identity = 51/133 (38.35%), Postives = 80/133 (60.15%), Query Frame = 1 

Query: 11  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSIT--NLTTLVN 70
           EK++++EEF+D+RL  DL      +D++  +   ++ L+ +IE ++K  +   +L + V+
Sbjct: 13  EKIRKYEEFLDQRLAKDLEAVFKSQDEIVAKITEYTQLKSSIEQIQKTDLKGKDLRSRVD 72

Query: 71  LGSEVYVQGNVADTQRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTHLIASIK 130
           LG   + Q +V D  RIF+ VG GF VEFT SEAL FI  K   L   +++     A IK
Sbjct: 73  LGCNFFCQASVPDPSRIFIAVGYGFFVEFTLSEALNFIEKKLAHLQHSVDKLGKDAAKIK 132

Query: 131 AQIKLVCEGIREL 142
           A +KLV  G++EL
Sbjct: 133 AHMKLVLGGLQEL 145

[Close]
BLAST of Cp4.1LG12g08360 vs. Swiss-Prot
Match: UXT_BOVIN (Protein UXT OS=Bos taurus GN=UXT PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.6e-17
Identity = 54/131 (41.22%), Postives = 75/131 (57.25%), Query Frame = 1 

Query: 11  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLTTLVNLG 70
           EKV R+E F+   L+ DL   +  RDKV+EQ   +  LR  IE L++ + + L   V+LG
Sbjct: 15  EKVLRYEAFISDVLQRDLQKVLDHRDKVYEQLAKYLQLRNVIERLQEANHSELYMQVDLG 74

Query: 71  SEVYVQGNVADTQRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTHLIASIKAQ 130
              +V   V DT RI+V +G GF +E T +EALKFI  K   L    +  T    +IKA 
Sbjct: 75  CNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFIDRKSSLLTELSDNLTKDSMNIKAH 134

Query: 131 IKLVCEGIREL 142
           I ++ EG+REL
Sbjct: 135 IHMLLEGLREL 145

[Close]
BLAST of Cp4.1LG12g08360 vs. TrEMBL
Match: A0A0A0K7F1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447080 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 4.7e-70
Identity = 140/155 (90.32%), Postives = 146/155 (94.19%), Query Frame = 1 

Query: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           MDV  DNFR+EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI
Sbjct: 1   MDVVTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLTTLVNLGSEVYVQGNVADTQRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY 120
           TN+ TLVNLGSEVYVQG+V DT+ IFVD+GLGFHVEFTWSEALKFISLKEERL RQIEEY
Sbjct: 61  TNVRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLTRQIEEY 120

Query: 121 THLIASIKAQIKLVCEGIRELLQLPAEKTVEGHVF 156
           T LIASIKAQIKLVCEGIRELLQLPAE+TVE  VF
Sbjct: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTVEERVF 155

[Close]
BLAST of Cp4.1LG12g08360 vs. TrEMBL
Match: A0A0D2UX98_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G325600 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 4.5e-65
Identity = 126/151 (83.44%), Postives = 141/151 (93.38%), Query Frame = 1 

Query: 5   IDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLT 64
           +D+ R EK+Q+FEEFVDRRLKPD+VHAIAERDK+F+QQK+FSDLR+NIENLEKNS+T+L 
Sbjct: 1   MDSLRQEKIQKFEEFVDRRLKPDVVHAIAERDKIFDQQKIFSDLRKNIENLEKNSVTSLR 60

Query: 65  TLVNLGSEVYVQGNVADTQRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTHLI 124
           TLVNLGSEVY+Q  V DTQRIFVDVGLGFHVEFTWSEALKFISL+EE+L RQIEEYT LI
Sbjct: 61  TLVNLGSEVYMQAEVPDTQRIFVDVGLGFHVEFTWSEALKFISLREEKLERQIEEYTRLI 120

Query: 125 ASIKAQIKLVCEGIRELLQLPAEKTVEGHVF 156
           ASIKAQIKLVCEGIRELLQ+P EKTVEG VF
Sbjct: 121 ASIKAQIKLVCEGIRELLQIPEEKTVEGRVF 151

[Close]
BLAST of Cp4.1LG12g08360 vs. TrEMBL
Match: A0A0D2QRW1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G325600 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 7.2e-63
Identity = 124/151 (82.12%), Postives = 140/151 (92.72%), Query Frame = 1 

Query: 5   IDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLT 64
           +D+ R EK+Q+FEEFVDRRLKPD+VHAIA+ DK+F+QQK+FSDLR+NIENLEKNS+T+L 
Sbjct: 1   MDSLRQEKIQKFEEFVDRRLKPDVVHAIAD-DKIFDQQKIFSDLRKNIENLEKNSVTSLR 60

Query: 65  TLVNLGSEVYVQGNVADTQRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTHLI 124
           TLVNLGSEVY+Q  V DTQRIFVDVGLGFHVEFTWSEALKFISL+EE+L RQIEEYT LI
Sbjct: 61  TLVNLGSEVYMQAEVPDTQRIFVDVGLGFHVEFTWSEALKFISLREEKLERQIEEYTRLI 120

Query: 125 ASIKAQIKLVCEGIRELLQLPAEKTVEGHVF 156
           ASIKAQIKLVCEGIRELLQ+P EKTVEG VF
Sbjct: 121 ASIKAQIKLVCEGIRELLQIPEEKTVEGRVF 150

[Close]
BLAST of Cp4.1LG12g08360 vs. TrEMBL
Match: A0A067L233_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15655 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.4e-61
Identity = 121/151 (80.13%), Postives = 138/151 (91.39%), Query Frame = 1 

Query: 5   IDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLT 64
           ++N+R EKVQ+FEEFVDRRLKPDLV AIAERDKVFEQQK+FSDLR NIENLEKNS+T+L 
Sbjct: 1   MENYRQEKVQKFEEFVDRRLKPDLVRAIAERDKVFEQQKIFSDLRNNIENLEKNSVTSLR 60

Query: 65  TLVNLGSEVYVQGNVADTQRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTHLI 124
           TLVNLGSEVY+Q +V DTQ IFVD+GLGFHVEFTWSEALK+ISL+EE++ARQIEEYTH I
Sbjct: 61  TLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKYISLREEKIARQIEEYTHQI 120

Query: 125 ASIKAQIKLVCEGIRELLQLPAEKTVEGHVF 156
           ASIKAQIK+V EGIRELLQ PAEK++ G  F
Sbjct: 121 ASIKAQIKMVYEGIRELLQFPAEKSLPGPTF 151

[Close]
BLAST of Cp4.1LG12g08360 vs. TrEMBL
Match: A0A059BFG6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02475 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 8.9e-61
Identity = 120/151 (79.47%), Postives = 137/151 (90.73%), Query Frame = 1 

Query: 5   IDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLT 64
           +DN+R +KV +FEEFVDRRLKPDLV AI+ERDKVFEQQK FSDLR+NIENL+KNS+T+L 
Sbjct: 1   MDNYRLDKVHKFEEFVDRRLKPDLVRAISERDKVFEQQKTFSDLRKNIENLQKNSVTSLR 60

Query: 65  TLVNLGSEVYVQGNVADTQRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTHLI 124
           TLVNLGSEVY+Q  V DTQ IFVDVGLGFHVEFTWSEAL +ISL+EE+LARQIEEYTH I
Sbjct: 61  TLVNLGSEVYMQAEVPDTQHIFVDVGLGFHVEFTWSEALNYISLREEKLARQIEEYTHHI 120

Query: 125 ASIKAQIKLVCEGIRELLQLPAEKTVEGHVF 156
           ASIKAQIK+VCEGIRELLQLPAE T++  +F
Sbjct: 121 ASIKAQIKMVCEGIRELLQLPAEATLQEPIF 151

[Close]
BLAST of Cp4.1LG12g08360 vs. TAIR10
Match: AT1G26660.2 (AT1G26660.2 Prefoldin chaperone subunit family protein)

HSP 1 Score: 125.9 bits (315), Expect = 2.1e-29
Identity = 73/164 (44.51%), Postives = 96/164 (58.54%), Query Frame = 1 

Query: 9   RNEKVQRFEEFVDRRLKPDLVHAIAERDKVF-------------------------EQQK 68
           R + +Q  EE +D+ LK  LVHA A R +                           E   
Sbjct: 5   RQKDLQLLEEIIDKGLKQKLVHATASRFRFIVVSAFVGFAGTRSLKNKKHCILLYREDSS 64

Query: 69  VFSDLRRNIENLEKNSITNLTTLVNLGSEVYVQGNVADTQRIFVDVGLGFHVEFTWSEAL 128
             SDLR+N+E LEKN + +L T VNLGSEVY+Q  V DT+ IF+DVGLGF+VEFT  EAL
Sbjct: 65  FSSDLRKNLETLEKNGVNSLKTRVNLGSEVYMQAEVPDTRHIFMDVGLGFYVEFTRQEAL 124

Query: 129 KFISLKEERLARQIEEYTHLIASIKAQIKLVCEGIRELLQLPAE 148
            +I+ +EER  +Q+EEYT +I  IK +IKL    I+++L LP E
Sbjct: 125 DYIAQREERTQKQLEEYTGVITQIKGRIKLAHYQIQQILNLPEE 168

[Close]
BLAST of Cp4.1LG12g08360 vs. NCBI nr
Match: gi|659124466|ref|XP_008462175.1| (PREDICTED: protein UXT homolog [Cucumis melo])

HSP 1 Score: 279.6 bits (714), Expect = 3.2e-72
Identity = 143/155 (92.26%), Postives = 148/155 (95.48%), Query Frame = 1 

Query: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           MDVG D+FRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI
Sbjct: 1   MDVGTDSFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLTTLVNLGSEVYVQGNVADTQRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY 120
           TNL TLVNLGSEVYVQG+V DT+ IFVD+GLGFHVEFTWSEALKFISLKEERL RQIEEY
Sbjct: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLTRQIEEY 120

Query: 121 THLIASIKAQIKLVCEGIRELLQLPAEKTVEGHVF 156
           T LIASIKAQIKLVCEGIRELLQLPAE+TVEG VF
Sbjct: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF 155

[Close]
BLAST of Cp4.1LG12g08360 vs. NCBI nr
Match: gi|449448012|ref|XP_004141760.1| (PREDICTED: protein UXT homolog [Cucumis sativus])

HSP 1 Score: 271.9 bits (694), Expect = 6.7e-70
Identity = 140/155 (90.32%), Postives = 146/155 (94.19%), Query Frame = 1 

Query: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           MDV  DNFR+EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI
Sbjct: 1   MDVVTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLTTLVNLGSEVYVQGNVADTQRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY 120
           TN+ TLVNLGSEVYVQG+V DT+ IFVD+GLGFHVEFTWSEALKFISLKEERL RQIEEY
Sbjct: 61  TNVRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLTRQIEEY 120

Query: 121 THLIASIKAQIKLVCEGIRELLQLPAEKTVEGHVF 156
           T LIASIKAQIKLVCEGIRELLQLPAE+TVE  VF
Sbjct: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTVEERVF 155

[Close]
BLAST of Cp4.1LG12g08360 vs. NCBI nr
Match: gi|1009154116|ref|XP_015894995.1| (PREDICTED: protein UXT homolog [Ziziphus jujuba])

HSP 1 Score: 255.8 bits (652), Expect = 5.0e-65
Identity = 128/151 (84.77%), Postives = 142/151 (94.04%), Query Frame = 1 

Query: 5   IDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLT 64
           +D+FR EKVQRFEEFVD RLKPDLVHAIAERDKVFEQQK+FSDLRRNIENLEKNS+T+L 
Sbjct: 1   MDSFRQEKVQRFEEFVDGRLKPDLVHAIAERDKVFEQQKIFSDLRRNIENLEKNSVTSLR 60

Query: 65  TLVNLGSEVYVQGNVADTQRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTHLI 124
           TLVNLGSEVY+Q +V DT+RIFVDVGLGFHVEFTWSEAL +ISL+EE+L+RQIEEYTHLI
Sbjct: 61  TLVNLGSEVYMQADVPDTKRIFVDVGLGFHVEFTWSEALNYISLREEKLSRQIEEYTHLI 120

Query: 125 ASIKAQIKLVCEGIRELLQLPAEKTVEGHVF 156
           ASIKAQIKLVCEGIRELLQLPAEK V+  +F
Sbjct: 121 ASIKAQIKLVCEGIRELLQLPAEKPVQERIF 151

[Close]
BLAST of Cp4.1LG12g08360 vs. NCBI nr
Match: gi|823231070|ref|XP_012448245.1| (PREDICTED: protein UXT homolog isoform X1 [Gossypium raimondii])

HSP 1 Score: 255.4 bits (651), Expect = 6.5e-65
Identity = 126/151 (83.44%), Postives = 141/151 (93.38%), Query Frame = 1 

Query: 5   IDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLT 64
           +D+ R EK+Q+FEEFVDRRLKPD+VHAIAERDK+F+QQK+FSDLR+NIENLEKNS+T+L 
Sbjct: 1   MDSLRQEKIQKFEEFVDRRLKPDVVHAIAERDKIFDQQKIFSDLRKNIENLEKNSVTSLR 60

Query: 65  TLVNLGSEVYVQGNVADTQRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTHLI 124
           TLVNLGSEVY+Q  V DTQRIFVDVGLGFHVEFTWSEALKFISL+EE+L RQIEEYT LI
Sbjct: 61  TLVNLGSEVYMQAEVPDTQRIFVDVGLGFHVEFTWSEALKFISLREEKLERQIEEYTRLI 120

Query: 125 ASIKAQIKLVCEGIRELLQLPAEKTVEGHVF 156
           ASIKAQIKLVCEGIRELLQ+P EKTVEG VF
Sbjct: 121 ASIKAQIKLVCEGIRELLQIPEEKTVEGRVF 151

[Close]
BLAST of Cp4.1LG12g08360 vs. NCBI nr
Match: gi|763793786|gb|KJB60782.1| (hypothetical protein B456_009G325600 [Gossypium raimondii])

HSP 1 Score: 248.1 bits (632), Expect = 1.0e-62
Identity = 124/151 (82.12%), Postives = 140/151 (92.72%), Query Frame = 1 

Query: 5   IDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLT 64
           +D+ R EK+Q+FEEFVDRRLKPD+VHAIA+ DK+F+QQK+FSDLR+NIENLEKNS+T+L 
Sbjct: 1   MDSLRQEKIQKFEEFVDRRLKPDVVHAIAD-DKIFDQQKIFSDLRKNIENLEKNSVTSLR 60

Query: 65  TLVNLGSEVYVQGNVADTQRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTHLI 124
           TLVNLGSEVY+Q  V DTQRIFVDVGLGFHVEFTWSEALKFISL+EE+L RQIEEYT LI
Sbjct: 61  TLVNLGSEVYMQAEVPDTQRIFVDVGLGFHVEFTWSEALKFISLREEKLERQIEEYTRLI 120

Query: 125 ASIKAQIKLVCEGIRELLQLPAEKTVEGHVF 156
           ASIKAQIKLVCEGIRELLQ+P EKTVEG VF
Sbjct: 121 ASIKAQIKLVCEGIRELLQIPEEKTVEGRVF 150

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g08360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UXT_DICDI1.1e-2241.18Protein UXT homolog OS=Dictyostelium discoideum GN=DDB_G0285389 PE=3 SV=1[more]
UXT_RAT4.6e-1841.98Protein UXT OS=Rattus norvegicus GN=Uxt PE=2 SV=1[more]
UXT_MOUSE6.0e-1841.98Protein UXT OS=Mus musculus GN=Uxt PE=1 SV=1[more]
UXT_NEMVE1.7e-1738.35Protein UXT homolog OS=Nematostella vectensis GN=v1g140887 PE=3 SV=1[more]
UXT_BOVIN6.6e-1741.22Protein UXT OS=Bos taurus GN=UXT PE=2 SV=1[more]
BLAST of Cp4.1LG12g08360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7F1_CUCSA4.7e-7090.32Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447080 PE=4 SV=1[more]
A0A0D2UX98_GOSRA4.5e-6583.44Uncharacterized protein OS=Gossypium raimondii GN=B456_009G325600 PE=4 SV=1[more]
A0A0D2QRW1_GOSRA7.2e-6382.12Uncharacterized protein OS=Gossypium raimondii GN=B456_009G325600 PE=4 SV=1[more]
A0A067L233_JATCU1.4e-6180.13Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15655 PE=4 SV=1[more]
A0A059BFG6_EUCGR8.9e-6179.47Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02475 PE=4 SV=1[more]
BLAST of Cp4.1LG12g08360 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G26660.22.1e-2944.51 Prefoldin chaperone subunit family protein[more]
BLAST of Cp4.1LG12g08360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659124466|ref|XP_008462175.1|3.2e-7292.26PREDICTED: protein UXT homolog [Cucumis melo][more]
gi|449448012|ref|XP_004141760.1|6.7e-7090.32PREDICTED: protein UXT homolog [Cucumis sativus][more]
gi|1009154116|ref|XP_015894995.1|5.0e-6584.77PREDICTED: protein UXT homolog [Ziziphus jujuba][more]
gi|823231070|ref|XP_012448245.1|6.5e-6583.44PREDICTED: protein UXT homolog isoform X1 [Gossypium raimondii][more]
gi|763793786|gb|KJB60782.1|1.0e-6282.12hypothetical protein B456_009G325600 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0016272prefoldin complex
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Vocabulary: INTERPRO
TermDefinition
IPR011599PFD_alpha_archaea
IPR009053Prefoldin
IPR004127Prefoldin_subunit_alpha
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0000122 negative regulation of transcription from RNA polymerase II promoter
cellular_component GO:0016272 prefoldin complex
cellular_component GO:0005634 nucleus
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0001106 RNA polymerase II transcription corepressor activity
molecular_function GO:0001104 RNA polymerase II transcription cofactor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g08360.1Cp4.1LG12g08360.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004127Prefoldin alpha-likePFAMPF02996Prefoldincoord: 30..134
score: 3.5
IPR009053PrefoldinGENE3DG3DSA:1.10.287.370coord: 18..143
score: 1.4
IPR009053PrefoldinunknownSSF46579Prefoldincoord: 41..144
score: 6.28
IPR011599Prefoldin alpha subunit, archaea-typeTIGRFAMsTIGR00293TIGR00293coord: 44..138
score: 5.7
NoneNo IPR availableunknownCoilCoilcoord: 110..130
score: -coord: 38..58
scor
NoneNo IPR availablePANTHERPTHR13345NUT2 AND UXTcoord: 2..148
score: 1.1
NoneNo IPR availablePANTHERPTHR13345:SF4PROTEIN UXTcoord: 2..148
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g08360Cucsa.359320Cucumber (Gy14) v1cgycpeB0936
Cp4.1LG12g08360CmaCh17G007870Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g08360CmoCh17G007540Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g08360Cla015461Watermelon (97103) v1cpewmB131
Cp4.1LG12g08360Csa7G447080Cucumber (Chinese Long) v2cpecuB161
Cp4.1LG12g08360MELO3C024261Melon (DHL92) v3.5.1cpemeB123
Cp4.1LG12g08360ClCG09G001850Watermelon (Charleston Gray)cpewcgB126
Cp4.1LG12g08360CSPI07G21600Wild cucumber (PI 183967)cpecpiB163
Cp4.1LG12g08360Lsi02G028140Bottle gourd (USVL1VR-Ls)cpelsiB113
Cp4.1LG12g08360MELO3C024261.2Melon (DHL92) v3.6.1cpemedB150
Cp4.1LG12g08360CsaV3_7G033500Cucumber (Chinese Long) v3cpecucB0188
Cp4.1LG12g08360Bhi09G000150Wax gourdcpewgoB0208
Cp4.1LG12g08360CsGy7G019910Cucumber (Gy14) v2cgybcpeB906
Cp4.1LG12g08360Carg09510Silver-seed gourdcarcpeB1424
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g08360Cucurbita moschata (Rifu)cmocpeB221
Cp4.1LG12g08360Cucurbita moschata (Rifu)cmocpeB426
Cp4.1LG12g08360Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g08360Bottle gourd (USVL1VR-Ls)cpelsiB127
Cp4.1LG12g08360Watermelon (Charleston Gray)cpewcgB148
Cp4.1LG12g08360Watermelon (97103) v1cpewmB145
Cp4.1LG12g08360Melon (DHL92) v3.5.1cpemeB132
Cp4.1LG12g08360Cucumber (Gy14) v2cgybcpeB306
Cp4.1LG12g08360Melon (DHL92) v3.6.1cpemedB159
Cp4.1LG12g08360Silver-seed gourdcarcpeB0171
Cp4.1LG12g08360Silver-seed gourdcarcpeB0280
Cp4.1LG12g08360Silver-seed gourdcarcpeB1049
Cp4.1LG12g08360Cucumber (Chinese Long) v3cpecucB0156
Cp4.1LG12g08360Wax gourdcpewgoB0190
Cp4.1LG12g08360Cucurbita pepo (Zucchini)cpecpeB157
Cp4.1LG12g08360Cucurbita pepo (Zucchini)cpecpeB178
Cp4.1LG12g08360Cucurbita pepo (Zucchini)cpecpeB181
Cp4.1LG12g08360Cucurbita pepo (Zucchini)cpecpeB182
Cp4.1LG12g08360Cucurbita pepo (Zucchini)cpecpeB187
Cp4.1LG12g08360Cucurbita maxima (Rimu)cmacpeB257
Cp4.1LG12g08360Cucurbita maxima (Rimu)cmacpeB466
Cp4.1LG12g08360Cucurbita maxima (Rimu)cmacpeB903