Cp4.1LG12g07210 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g07210
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionChloroplast protein
LocationCp4.1LG12 : 7087687 .. 7090682 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTTTCATAAAAAAGCCCATCGGGCCTATAAACAACTTACAGATAGGTCGGTGGGCGCAGCCATGGCCACAGATCGAGTAGCTTATCTTCTTCTCCGCCACTCAAAGCCGCTCTCTGAAAACCCACGCTGGCTCTCTCTGCTTATACAAACCACACAACAATGTCACTTCAAGCTCACCTGGTTCATTTCCTACTCAGCCATGGCCGCCGCAATTTCCTTCACAATCTCTAGCTCTTCCCTCTGGTCTCGACTTTCTAAACCCGCTTCTAAATTTCGCGATCACCGTCTGAGAATCATGGCCGCGGCTACCGGAACTAAGGTGGTACCCGCTGTGATAGTCGGAAGTGGGCGCGTTGGGAGGGCGCTGCTGGACATGGGAAACGGCGAAGATTTTTTGGTGAAGAGAGGCGAGTCCGTGCCCCTTGATTTTCCAGGTCCTATCCTTGTTTGTACCAGAAATGATGATCTTGAAGCTGTTCTTGAATCCACTCCTCGATCGAGGTGGAACGGTATGATCATCGAATCGTGCTATTGTCTTTATTTTCTCTCTTATTTGAATCGAGACGCATTTTATTGGCGACGATATGCTTCACTCCCATCTCGTTTTATGGGGTTTGAATTCGAAGTTTATGAGCTTTCTTGTTTTCATTGCCTTTCCCATAAACTCAGCTTCAGCTCAAGTTTTTTGGTACAAGTTTACCAAATTTCATTTCATTTCCTTTCCAATTGGTATTGTAGTTCACGTCTGGACTTCGTGACTCAATTTAATATCCAAGCTTGCATACCATATGCAATCAACTCACATTTCCTGTGAGATTCCATATTTCATTTCGGGTGGAAACCTCCCCTAGCAAACACTTTAAAATCTTGAGAAAAAATCCGAAAGGAAAAGTCCAAAGAGAATGATATCTGCTAGCGGTGGGCCTGTTACAAAGGGTTTCAAAGTTAGACACGAGCACACCAACGAAGATGTTTCCCGAGGGGTGGATTGTGAGATCCCACATTGGTTAGAGAGGAACGAAAGATTCTTTACAAGGGTGTGGAAATCTCTCCCTAGCACTCTTCTAGCGTTTTAAAGCCTTGAAGGAAAGTCTGAAGTGAAAGCTCAAAGAGGACAATATACTTGGGTTGTATGCAACGTTCGAATTTAAGAAGAAATTAGGGTATTCCCATTTGGAATATCTCATCATATAATGGCTTATGCTGTATTGCTTTGGCAATGGATATTGACAATCTAGCAGATTTGGTTTTTTTCCAGAATGGAATGCTGGACCCTTGGTATGAAAGCAAAGGTCTAAATGATGTGAATCAAGTGTTAGCATATTTCGCTATCTCAAAGCTGGGAGAGGCTCCTGTGGATGGAATAACGGATACCAATCCTGAAGGTCTGACAGCCGCGTATGGAAAATGGGCATCTGCCGTAGCAGGAAGGCTCAATGCTGCAGGCCTCTCCTGCAAGGTAAATCCACAGAAGAAATGTGCCTCTTATGGAAGTAAACAATGAGATGTTTCATGAATGTTCTTTATAGAAATATGTGTATATGTGTCATTTATGATATTCTTTTATTCCATATACACATTAACTTTAAAGGCTATGTTTGTAAGCTAGGTTCTTGACAAGGAAGCATTTGAGAAACAAATGTTGGAGAAGCTGATTTGGATTTCTGCATTTATGCTCGTTGGAGCACGTCATCCAGGTGCGACCGTGGGTGCTGTGGAAAAGGATTATCGCTCTGAAGTAAGATCCCTTCTTCTTCATGCAATAAGTTTACTGCATAATTCTTCAACTATGTACATTGTGGAATCATTCTTTATAAGGGGTAGAAACCTCTCCCTAGCAAATGCATTTTAAAAATATCGAGGGGAAAGTCCAAAGAGGACAATATATGCTAGCGGTGGACTTGGGGCCGTTACGTATAACAGTCTAATCCAAATTTATAATTGCAGGTTTCTAGCCTCATTGCAGAACTTGCATCTGCAGCCGCAGCTGAAAGGCAGTTGGTGTTTGAAGAAGGTATAGAGGAAAGATTATGTGCATACTCTCGGGCTGTGGCTCACTTCCCCACGGCAGTAAAAGAGGTAGATTAAAATCGAAAGGGAATTCTGGGAGCTCCCTCAATACCTTTTTATTTTTTTTCTTGTGCTAACAATCCCTTTACTTACACAGTTCAAATGGCGAAACGGGTGGTTCTATTCTCTCTCCGAGAAAGCCATTGCTGGTGGAAAACCCGACCCCTGCCCCCTGCATACCGCTTGGCTTGCGGAGCTGAAAGTTATCTAGGAATGACCCTGTATTGCTTGCTATCAAATGGATTTCCTGTTGCACAACGGTTGGCTTTAATCCAAGTGAAGAACTCTCTTTTTGTTTTAAGAAGTAGATTTTGTACCTGTGTTCGTCATCTACAAATCACCTCCAGTTACTTGTTTGAACTGGGCCCAGCCTCTTTCAGTTGGTGATAGAGAAGGATTCATCATCTGTACCATCCTGAACTTCTGAACAGAAAAATCCATCAATAATGTTAAGAGAGATTTAATCAAATTTCTACACATGCGAAGACTCCTTGCGAACAAAAAAAAAAAAACATGAAATTTTACGATGCCAACATTAGAGCAATGTGGAAGGAAATAGCAACCCTAACATTATTGAGGATGGTTGATTTATTGAGGATCGTTGGGAAAGGAGTGAGAGTTTCGGACAATATCAAACTTAGCCATGTCTATGAAATCTCAAGTGTCGAATAGGCAAAAGTGTGACTCAAGTATGAAACTGATGATGTGGTTTGTCTGTGAATTCCAGAGGAGTCAAGTCTCGACTAAAGAGATTGTGAATTCCAGAGAAGGAGTCAAGTCCCAACTAAAGAGAGCCAGAGAAGGAGTCAAGTCCCAACTAAAGAGAGGTTGTTCGAGAGCTCCATAGGCCTTAAGGAAGGCTCTATTGTGTACTTTATTTGTAAAGAGGAGTCTCATGTTAGTATAAGGAATACTGTTTCCATT

mRNA sequence

TTCTTTCATAAAAAAGCCCATCGGGCCTATAAACAACTTACAGATAGGTCGGTGGGCGCAGCCATGGCCACAGATCGAGTAGCTTATCTTCTTCTCCGCCACTCAAAGCCGCTCTCTGAAAACCCACGCTGGCTCTCTCTGCTTATACAAACCACACAACAATGTCACTTCAAGCTCACCTGGTTCATTTCCTACTCAGCCATGGCCGCCGCAATTTCCTTCACAATCTCTAGCTCTTCCCTCTGGTCTCGACTTTCTAAACCCGCTTCTAAATTTCGCGATCACCGTCTGAGAATCATGGCCGCGGCTACCGGAACTAAGGTGGTACCCGCTGTGATAGTCGGAAGTGGGCGCGTTGGGAGGGCGCTGCTGGACATGGGAAACGGCGAAGATTTTTTGGTGAAGAGAGGCGAGTCCGTGCCCCTTGATTTTCCAGGTCCTATCCTTGTTTGTACCAGAAATGATGATCTTGAAGCTGTTCTTGAATCCACTCCTCGATCGAGGTGGAACGATTTGGTTTTTTTCCAGAATGGAATGCTGGACCCTTGGTATGAAAGCAAAGGTCTAAATGATGTGAATCAAGTGTTAGCATATTTCGCTATCTCAAAGCTGGGAGAGGCTCCTGTGGATGGAATAACGGATACCAATCCTGAAGGTCTGACAGCCGCGTATGGAAAATGGGCATCTGCCGTAGCAGGAAGGCTCAATGCTGCAGGCCTCTCCTGCAAGGTTCTTGACAAGGAAGCATTTGAGAAACAAATGTTGGAGAAGCTGATTTGGATTTCTGCATTTATGCTCGTTGGAGCACGTCATCCAGCTGAAAGGCAGTTGGTGTTTGAAGAAGGTATAGAGGAAAGATTATGTGCATACTCTCGGGCTGTGGCTCACTTCCCCACGGCAGTAAAAGAGTTCAAATGGCGAAACGGGTGGTTCTATTCTCTCTCCGAGAAAGCCATTGCTGGTGGAAAACCCGACCCCTGCCCCCTGCATACCGCTTGGCTTGCGGAGCTGAAAGTTATCTAGGAATGACCCTGTATTGCTTGCTATCAAATGGATTTCCTGTTGCACAACGGTTGGCTTTAATCCAAGTGAAGAACTCTCTTTTTGTTTTAAGAAGTAGATTTTGTACCTGTGTTCGTCATCTACAAATCACCTCCAGTTACTTGTTTGAACTGGGCCCAGCCTCTTTCAGTTGGTGATAGAGAAGGATTCATCATCTGTACCATCCTGAACTTCTGAACAGAAAAATCCATCAATAATGTTAAGAGAGATTTAATCAAATTTCTACACATGCGAAGACTCCTTGCGAACAAAAAAAAAAAAACATGAAATTTTACGATGCCAACATTAGAGCAATGTGGAAGGAAATAGCAACCCTAACATTATTGAGGATGGTTGATTTATTGAGGATCGTTGGGAAAGGAGTGAGAGTTTCGGACAATATCAAACTTAGCCATGTCTATGAAATCTCAAGTGTCGAATAGGCAAAAGTGTGACTCAAGTATGAAACTGATGATGTGGTTTGTCTGTGAATTCCAGAGGAGTCAAGTCTCGACTAAAGAGATTGTGAATTCCAGAGAAGGAGTCAAGTCCCAACTAAAGAGAGCCAGAGAAGGAGTCAAGTCCCAACTAAAGAGAGGTTGTTCGAGAGCTCCATAGGCCTTAAGGAAGGCTCTATTGTGTACTTTATTTGTAAAGAGGAGTCTCATGTTAGTATAAGGAATACTGTTTCCATT

Coding sequence (CDS)

ATGGCCACAGATCGAGTAGCTTATCTTCTTCTCCGCCACTCAAAGCCGCTCTCTGAAAACCCACGCTGGCTCTCTCTGCTTATACAAACCACACAACAATGTCACTTCAAGCTCACCTGGTTCATTTCCTACTCAGCCATGGCCGCCGCAATTTCCTTCACAATCTCTAGCTCTTCCCTCTGGTCTCGACTTTCTAAACCCGCTTCTAAATTTCGCGATCACCGTCTGAGAATCATGGCCGCGGCTACCGGAACTAAGGTGGTACCCGCTGTGATAGTCGGAAGTGGGCGCGTTGGGAGGGCGCTGCTGGACATGGGAAACGGCGAAGATTTTTTGGTGAAGAGAGGCGAGTCCGTGCCCCTTGATTTTCCAGGTCCTATCCTTGTTTGTACCAGAAATGATGATCTTGAAGCTGTTCTTGAATCCACTCCTCGATCGAGGTGGAACGATTTGGTTTTTTTCCAGAATGGAATGCTGGACCCTTGGTATGAAAGCAAAGGTCTAAATGATGTGAATCAAGTGTTAGCATATTTCGCTATCTCAAAGCTGGGAGAGGCTCCTGTGGATGGAATAACGGATACCAATCCTGAAGGTCTGACAGCCGCGTATGGAAAATGGGCATCTGCCGTAGCAGGAAGGCTCAATGCTGCAGGCCTCTCCTGCAAGGTTCTTGACAAGGAAGCATTTGAGAAACAAATGTTGGAGAAGCTGATTTGGATTTCTGCATTTATGCTCGTTGGAGCACGTCATCCAGCTGAAAGGCAGTTGGTGTTTGAAGAAGGTATAGAGGAAAGATTATGTGCATACTCTCGGGCTGTGGCTCACTTCCCCACGGCAGTAAAAGAGTTCAAATGGCGAAACGGGTGGTTCTATTCTCTCTCCGAGAAAGCCATTGCTGGTGGAAAACCCGACCCCTGCCCCCTGCATACCGCTTGGCTTGCGGAGCTGAAAGTTATCTAG

Protein sequence

MATDRVAYLLLRHSKPLSENPRWLSLLIQTTQQCHFKLTWFISYSAMAAAISFTISSSSLWSRLSKPASKFRDHRLRIMAAATGTKVVPAVIVGSGRVGRALLDMGNGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESKGLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDKEAFEKQMLEKLIWISAFMLVGARHPAERQLVFEEGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAELKVI
Homology
[Close]
BLAST of Cp4.1LG12g07210 vs. TrEMBL
Match: A0A0A0K9Y7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G431350 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 4.8e-138
Identity = 253/300 (84.33%), Postives = 259/300 (86.33%), Query Frame = 1 

Query: 47  MAAAISFTISSSSLWSRLSKPASKFRDHRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 106
           MAAAISFTIS+ SL S+LSKP S+F   RLRIMAAAT TKVVPAVIVGSGRVGRALLDMG
Sbjct: 1   MAAAISFTISNPSLCSQLSKPVSRFGARRLRIMAAATETKVVPAVIVGSGRVGRALLDMG 60

Query: 107 NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESK 166
           NGED LVKRGESVPLDF GPILVCTRNDDLEAVLE+TPRSRWNDLVFFQNGMLDPWYESK
Sbjct: 61  NGEDVLVKRGESVPLDFSGPILVCTRNDDLEAVLEATPRSRWNDLVFFQNGMLDPWYESK 120

Query: 167 GLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDK 226
           GL D NQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRL+AAGLSCKVL K
Sbjct: 121 GLKDANQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLSAAGLSCKVLGK 180

Query: 227 EAFEKQMLEKLIWISAFMLVGARHP---------------------------AERQLVFE 286
           EAFEKQMLEKLIWISAFMLVGARHP                           AERQLVFE
Sbjct: 181 EAFEKQMLEKLIWISAFMLVGARHPGATVGAVEKDYRSEVSSLIAELASAAAAERQLVFE 240

Query: 287 EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAELKVI 320
           EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIA GKPDPCPLHTAWL ELKV+
Sbjct: 241 EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAAGKPDPCPLHTAWLKELKVV 300

[Close]
BLAST of Cp4.1LG12g07210 vs. TrEMBL
Match: M5WUK5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009044mg PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 3.1e-116
Identity = 215/304 (70.72%), Postives = 236/304 (77.63%), Query Frame = 1 

Query: 52  SFTISSSSLWSRLSKPASKFRDHRLRI---------MAAATGTKVVPAVIVGSGRVGRAL 111
           + T+SSS+L+    KP S      LRI         MA+ T TKVVPAVIVG GRVGRAL
Sbjct: 5   TLTLSSSTLFHLTRKPISFTSTLTLRIKARASTAIAMASTTKTKVVPAVIVGGGRVGRAL 64

Query: 112 LDMGNGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPW 171
            DMGNG+D LVKRG+ VPLDF GPILVCTRNDDLEAVLE+TPR RWND+VFFQNGML+PW
Sbjct: 65  EDMGNGDDLLVKRGDPVPLDFKGPILVCTRNDDLEAVLEATPRPRWNDMVFFQNGMLEPW 124

Query: 172 YESKGLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCK 231
           +ESKGL D +QVLAYFA+SKLGE PVDG TDTNPEGLTA+YGKWAS VA RL A GL+CK
Sbjct: 125 FESKGLGDADQVLAYFAVSKLGEPPVDGKTDTNPEGLTASYGKWASVVAERLQAGGLTCK 184

Query: 232 VLDKEAFEKQMLEKLIWISAFMLVGARHP---------------------------AERQ 291
           VL+KEAF+KQMLEKLIWISAFMLVGARHP                           AE+ 
Sbjct: 185 VLNKEAFQKQMLEKLIWISAFMLVGARHPGTTVGGVEKEYRSEVSSLIAELASAAAAEKG 244

Query: 292 LVFEEGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAE 320
           LVFEE +E+RLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIA GKPDPCPLHTAWL E
Sbjct: 245 LVFEEAMEDRLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAAGKPDPCPLHTAWLKE 304

[Close]
BLAST of Cp4.1LG12g07210 vs. TrEMBL
Match: A0A103YBM3_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_015570 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 8.3e-114
Identity = 205/304 (67.43%), Postives = 237/304 (77.96%), Query Frame = 1 

Query: 45  SAMAAAISFTISS-SSLWSRLSKPASKFRDHRLR-IMAAATGTKVVPAVIVGSGRVGRAL 104
           S MA+  + ++SS SSLW   +KP S F     R I   A  TKV+P++IVG GRVG+AL
Sbjct: 29  STMASLTTLSLSSTSSLWYHCTKPDSLFNLRYSRTITCMAAATKVIPSIIVGGGRVGKAL 88

Query: 105 LDMGNGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPW 164
            DMG G+D LVKRG+ VP+DFPGPILVCTRNDDL+AVL+STP+SRW+DLVFFQNGML+PW
Sbjct: 89  QDMGGGDDLLVKRGQPVPIDFPGPILVCTRNDDLDAVLQSTPKSRWSDLVFFQNGMLEPW 148

Query: 165 YESKGLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCK 224
           +ESKGL D +QVLAYFA+SKLGE PVDGITDTNPEGLTAA+GKW SAVA RL A GLSCK
Sbjct: 149 FESKGLGDADQVLAYFAVSKLGEPPVDGITDTNPEGLTAAFGKWGSAVAARLEAGGLSCK 208

Query: 225 VLDKEAFEKQMLEKLIWISAFMLVGARHP---------------------------AERQ 284
           VL+KE FEKQMLEKLIWI+AFMLVGARHP                           AE+ 
Sbjct: 209 VLEKEPFEKQMLEKLIWIAAFMLVGARHPGATVGIVEKDFRSEVGSLIEELASAAAAEKG 268

Query: 285 LVFEEGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAE 320
           + FEEGIE+RLCAY+RAV+HFPTAVKEFKWRNGWFYSLSEKAIA GK DPCPLHT+WL +
Sbjct: 269 IFFEEGIEDRLCAYARAVSHFPTAVKEFKWRNGWFYSLSEKAIAQGKQDPCPLHTSWLKD 328

[Close]
BLAST of Cp4.1LG12g07210 vs. TrEMBL
Match: F6HBY4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0018g01610 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 1.9e-113
Identity = 208/299 (69.57%), Postives = 236/299 (78.93%), Query Frame = 1 

Query: 49  AAISFTISSSSLWSRLSKPASKFRDHRLRIMAA-ATGTKVVPAVIVGSGRVGRALLDMGN 108
           A++S T SS  L      P  KFR  R R+ A+ A  T+V PAVIVG GRVGRAL  MG+
Sbjct: 4   ASVSATTSSLLLSPSKPTPPIKFR-FRFRVRASSAMATQVAPAVIVGGGRVGRALQGMGS 63

Query: 109 GEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESKG 168
           G+D LVKRG+SVPLDF GPILVCTRNDDL+AVLESTP+SRW+DLVFFQNGML+PW +SKG
Sbjct: 64  GDDLLVKRGDSVPLDFAGPILVCTRNDDLDAVLESTPKSRWSDLVFFQNGMLEPWLQSKG 123

Query: 169 LNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDKE 228
           L+D +QVLAYFA+SKLGE P+DG TDTNPEGLTAAYGKWASAVAGRL+A GLSCKVLDKE
Sbjct: 124 LSDADQVLAYFAVSKLGEPPIDGKTDTNPEGLTAAYGKWASAVAGRLHAGGLSCKVLDKE 183

Query: 229 AFEKQMLEKLIWISAFMLVGARHP---------------------------AERQLVFEE 288
           AF+KQMLEKLIWISAFMLVGARHP                            E+ +VF+E
Sbjct: 184 AFQKQMLEKLIWISAFMLVGARHPGATVGVVEKEFRSEVSSLIGELASAAAVEKGIVFDE 243

Query: 289 GIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAELKVI 320
           G+E+RLCAYSRAV+HFPTA KEFKWRNGWFYSLS+KAIA GKPDPCPLHT WL ELK++
Sbjct: 244 GMEDRLCAYSRAVSHFPTAAKEFKWRNGWFYSLSQKAIAEGKPDPCPLHTEWLKELKIV 301

[Close]
BLAST of Cp4.1LG12g07210 vs. TrEMBL
Match: A0A067LBR6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26953 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 2.4e-113
Identity = 218/314 (69.43%), Postives = 235/314 (74.84%), Query Frame = 1 

Query: 49  AAISFTISSSSLWSRLSKPASKFRDHRLRI-----------MAAATGT-----KVVPAVI 108
           A+++ T+SSSSL     KP SKF      I           MAAATG+     KV PAVI
Sbjct: 2   ASVALTLSSSSL----IKPTSKFTFFSTEIISGAQKPSTFSMAAATGSTATTAKVAPAVI 61

Query: 109 VGSGRVGRALLDMGNGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLV 168
           VG GRVG AL  MGNG+D LVKRGE VPLDF GPILVCTRNDDLEAVLE+TP+ RWNDLV
Sbjct: 62  VGGGRVGSALQGMGNGQDLLVKRGEPVPLDFEGPILVCTRNDDLEAVLEATPKPRWNDLV 121

Query: 169 FFQNGMLDPWYESKGLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAG 228
           FFQNGML+PW ESKGL D +QVLAYFA+SKLGE P+DG TDTNPEGLTAAYGKWASAVA 
Sbjct: 122 FFQNGMLEPWLESKGLGDADQVLAYFAVSKLGEPPIDGKTDTNPEGLTAAYGKWASAVAA 181

Query: 229 RLNAAGLSCKVLDKEAFEKQMLEKLIWISAFMLVGARH---------------------- 288
           RL+A GLSCKVLDK AF+KQMLEKLIWISAFMLVGARH                      
Sbjct: 182 RLHAGGLSCKVLDKLAFQKQMLEKLIWISAFMLVGARHQGATVGTVEKEYRSEASSLIAE 241

Query: 289 -----PAERQLVFEEGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDP 320
                 AE+ L FEE IEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLS+KA+A GKPDP
Sbjct: 242 LASAAAAEKGLEFEESIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSQKALAQGKPDP 301

[Close]
BLAST of Cp4.1LG12g07210 vs. TAIR10
Match: AT1G16080.1 (AT1G16080.1 unknown protein)

HSP 1 Score: 405.2 bits (1040), Expect = 3.7e-113
Identity = 206/308 (66.88%), Postives = 231/308 (75.00%), Query Frame = 1 

Query: 39  TWFISYSAMAAAISFTISSSSLWSRLSKPASKFRDHRLRIMAAATGTKVVPAVIVGSGRV 98
           T F    + +A  SF   S SL   +S+ A       +   +AAT  K+ PAVIVG GRV
Sbjct: 7   TLFAVSCSASARFSFLRRSESLKPSVSR-ARFAVPMAMAAASAATAKKLAPAVIVGGGRV 66

Query: 99  GRALLDMGNGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGM 158
           GRAL +MGNGED LVKRGE+VP+DF GPILVCTRNDDL+AVLE+TP+SRW DLVFFQNGM
Sbjct: 67  GRALQEMGNGEDLLVKRGEAVPVDFEGPILVCTRNDDLDAVLEATPQSRWKDLVFFQNGM 126

Query: 159 LDPWYESKGLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAG 218
           ++PW+ESKGL D +QVLAYFA+SKLGE PVDG TDTNPEGLTAAYGKWAS +A RL + G
Sbjct: 127 MEPWFESKGLGDTDQVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWASEIAARLQSGG 186

Query: 219 LSCKVLDKEAFEKQMLEKLIWISAFMLVGARHP--------------------------- 278
           LSCKVLDKEAF+KQMLEKLIWI AFMLVGARHP                           
Sbjct: 187 LSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGASVGTVEKEYRDEVSRLIQELAAAAA 246

Query: 279 AERQLVFEEGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTA 320
           AE+ L FEE + ERLCAYSRAV+HFPTAVKEFKWRNGWFYSLSEKAIA G+PDPCPLHT 
Sbjct: 247 AEKGLTFEENMVERLCAYSRAVSHFPTAVKEFKWRNGWFYSLSEKAIAEGQPDPCPLHTE 306

[Close]
BLAST of Cp4.1LG12g07210 vs. NCBI nr
Match: gi|659122550|ref|XP_008461203.1| (PREDICTED: uncharacterized protein LOC103499856 isoform X1 [Cucumis melo])

HSP 1 Score: 503.8 bits (1296), Expect = 2.2e-139
Identity = 255/300 (85.00%), Postives = 260/300 (86.67%), Query Frame = 1 

Query: 47  MAAAISFTISSSSLWSRLSKPASKFRDHRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 106
           MAAAISFTIS+ SL S+LSKP S+F   RLRIMAAATGTKVVPAVIVGSGRVGRALLDMG
Sbjct: 1   MAAAISFTISNPSLCSQLSKPVSRFGARRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 60

Query: 107 NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESK 166
           NGED LVKRGESVPLDF GPILVCTRNDDLEAVLE+TPRSRWNDLVFFQNGMLDPWYESK
Sbjct: 61  NGEDVLVKRGESVPLDFSGPILVCTRNDDLEAVLEATPRSRWNDLVFFQNGMLDPWYESK 120

Query: 167 GLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDK 226
           GL D NQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVL K
Sbjct: 121 GLKDANQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLGK 180

Query: 227 EAFEKQMLEKLIWISAFMLVGARHP---------------------------AERQLVFE 286
           EAFEKQMLEKLIWISAFMLVGARHP                           AERQLVFE
Sbjct: 181 EAFEKQMLEKLIWISAFMLVGARHPGATVGAVEKDYRSEVSSLIAELACAAAAERQLVFE 240

Query: 287 EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAELKVI 320
           EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIA GKPDPCPLHTAWL ELKV+
Sbjct: 241 EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAAGKPDPCPLHTAWLKELKVV 300

[Close]
BLAST of Cp4.1LG12g07210 vs. NCBI nr
Match: gi|449436211|ref|XP_004135887.1| (PREDICTED: uncharacterized protein LOC101216543 isoform X1 [Cucumis sativus])

HSP 1 Score: 498.8 bits (1283), Expect = 7.0e-138
Identity = 253/300 (84.33%), Postives = 259/300 (86.33%), Query Frame = 1 

Query: 47  MAAAISFTISSSSLWSRLSKPASKFRDHRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 106
           MAAAISFTIS+ SL S+LSKP S+F   RLRIMAAAT TKVVPAVIVGSGRVGRALLDMG
Sbjct: 1   MAAAISFTISNPSLCSQLSKPVSRFGARRLRIMAAATETKVVPAVIVGSGRVGRALLDMG 60

Query: 107 NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESK 166
           NGED LVKRGESVPLDF GPILVCTRNDDLEAVLE+TPRSRWNDLVFFQNGMLDPWYESK
Sbjct: 61  NGEDVLVKRGESVPLDFSGPILVCTRNDDLEAVLEATPRSRWNDLVFFQNGMLDPWYESK 120

Query: 167 GLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDK 226
           GL D NQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRL+AAGLSCKVL K
Sbjct: 121 GLKDANQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLSAAGLSCKVLGK 180

Query: 227 EAFEKQMLEKLIWISAFMLVGARHP---------------------------AERQLVFE 286
           EAFEKQMLEKLIWISAFMLVGARHP                           AERQLVFE
Sbjct: 181 EAFEKQMLEKLIWISAFMLVGARHPGATVGAVEKDYRSEVSSLIAELASAAAAERQLVFE 240

Query: 287 EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAELKVI 320
           EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIA GKPDPCPLHTAWL ELKV+
Sbjct: 241 EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAAGKPDPCPLHTAWLKELKVV 300

[Close]
BLAST of Cp4.1LG12g07210 vs. NCBI nr
Match: gi|595939169|ref|XP_007215727.1| (hypothetical protein PRUPE_ppa009044mg [Prunus persica])

HSP 1 Score: 426.4 bits (1095), Expect = 4.4e-116
Identity = 215/304 (70.72%), Postives = 236/304 (77.63%), Query Frame = 1 

Query: 52  SFTISSSSLWSRLSKPASKFRDHRLRI---------MAAATGTKVVPAVIVGSGRVGRAL 111
           + T+SSS+L+    KP S      LRI         MA+ T TKVVPAVIVG GRVGRAL
Sbjct: 5   TLTLSSSTLFHLTRKPISFTSTLTLRIKARASTAIAMASTTKTKVVPAVIVGGGRVGRAL 64

Query: 112 LDMGNGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPW 171
            DMGNG+D LVKRG+ VPLDF GPILVCTRNDDLEAVLE+TPR RWND+VFFQNGML+PW
Sbjct: 65  EDMGNGDDLLVKRGDPVPLDFKGPILVCTRNDDLEAVLEATPRPRWNDMVFFQNGMLEPW 124

Query: 172 YESKGLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCK 231
           +ESKGL D +QVLAYFA+SKLGE PVDG TDTNPEGLTA+YGKWAS VA RL A GL+CK
Sbjct: 125 FESKGLGDADQVLAYFAVSKLGEPPVDGKTDTNPEGLTASYGKWASVVAERLQAGGLTCK 184

Query: 232 VLDKEAFEKQMLEKLIWISAFMLVGARHP---------------------------AERQ 291
           VL+KEAF+KQMLEKLIWISAFMLVGARHP                           AE+ 
Sbjct: 185 VLNKEAFQKQMLEKLIWISAFMLVGARHPGTTVGGVEKEYRSEVSSLIAELASAAAAEKG 244

Query: 292 LVFEEGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAE 320
           LVFEE +E+RLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIA GKPDPCPLHTAWL E
Sbjct: 245 LVFEEAMEDRLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAAGKPDPCPLHTAWLKE 304

[Close]
BLAST of Cp4.1LG12g07210 vs. NCBI nr
Match: gi|645245378|ref|XP_008228852.1| (PREDICTED: uncharacterized protein LOC103328234 isoform X1 [Prunus mume])

HSP 1 Score: 426.0 bits (1094), Expect = 5.7e-116
Identity = 215/304 (70.72%), Postives = 236/304 (77.63%), Query Frame = 1 

Query: 52  SFTISSSSLWSRLSKPASKFRDHRLRI---------MAAATGTKVVPAVIVGSGRVGRAL 111
           + T+SSS+L+    KP S      LRI         MA+ T TKVVPAVIVG GRVGRAL
Sbjct: 5   TLTLSSSTLFHLTRKPISFTSTLTLRIKARASTAIAMASTTKTKVVPAVIVGGGRVGRAL 64

Query: 112 LDMGNGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPW 171
            DMGNG+D LVKRG+ VPLDF GPILVCTRNDDL+AVLE+TPR RWNDLVFFQNGML+PW
Sbjct: 65  EDMGNGDDLLVKRGDPVPLDFKGPILVCTRNDDLDAVLEATPRPRWNDLVFFQNGMLEPW 124

Query: 172 YESKGLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCK 231
           +ESKGL D +QVLAYFA+SKLGE PVDG TDTNPEGLTA+YGKWAS VA RL A GL+CK
Sbjct: 125 FESKGLGDADQVLAYFAVSKLGEPPVDGKTDTNPEGLTASYGKWASVVAERLQAGGLTCK 184

Query: 232 VLDKEAFEKQMLEKLIWISAFMLVGARHP---------------------------AERQ 291
           VL+KEAF+KQMLEKLIWISAFMLVGARHP                           AE+ 
Sbjct: 185 VLNKEAFQKQMLEKLIWISAFMLVGARHPGTTVGGVEKEYRSEVSSLIAELASAAAAEKG 244

Query: 292 LVFEEGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAE 320
           LVFEE +E+RLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIA GKPDPCPLHTAWL E
Sbjct: 245 LVFEEAMEDRLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAAGKPDPCPLHTAWLKE 304

[Close]
BLAST of Cp4.1LG12g07210 vs. NCBI nr
Match: gi|697123385|ref|XP_009615684.1| (PREDICTED: uncharacterized protein LOC104108372 [Nicotiana tomentosiformis])

HSP 1 Score: 421.0 bits (1081), Expect = 1.8e-114
Identity = 211/311 (67.85%), Postives = 238/311 (76.53%), Query Frame = 1 

Query: 45  SAMAAAISFTISSSSLWSRLSKPASKFRDHRLRI---------MAAATGTKVVPAVIVGS 104
           +AM  A+  T+SSS+ W   +KP S+  +   +I         MA  T TKV PA+IVG 
Sbjct: 3   AAMVNAV--TLSSSTFWYHYTKPISRI-NFNFKIGASLSTSANMATGTTTKVAPAIIVGG 62

Query: 105 GRVGRALLDMGNGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQ 164
           GRVGRAL D+GNG+D LVKRGE VP+DF GPILVCTRNDDLEAVLE+TP+SRW+DLVFFQ
Sbjct: 63  GRVGRALQDLGNGDDVLVKRGEPVPVDFVGPILVCTRNDDLEAVLEATPKSRWSDLVFFQ 122

Query: 165 NGMLDPWYESKGLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLN 224
           NGML+PW++SKGL D +QVLAYFA+SKLGE P DG TDTNPEGLTAAYGKWASAVA RL+
Sbjct: 123 NGMLEPWFQSKGLGDADQVLAYFAVSKLGEPPTDGKTDTNPEGLTAAYGKWASAVAARLH 182

Query: 225 AAGLSCKVLDKEAFEKQMLEKLIWISAFMLVGARHP------------------------ 284
           A GLSCKVLDKE F+KQMLEKLIWI AFMLVGARHP                        
Sbjct: 183 AGGLSCKVLDKEPFQKQMLEKLIWICAFMLVGARHPGATVGAVEKEYRSEASKLIAELAS 242

Query: 285 ---AERQLVFEEGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPL 320
              AE+ LVFEE +E+RLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAI  GKPDPCPL
Sbjct: 243 AAAAEKGLVFEEAMEDRLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIVEGKPDPCPL 302

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g07210 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG12g07210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9Y7_CUCSA4.8e-13884.33Uncharacterized protein OS=Cucumis sativus GN=Csa_7G431350 PE=4 SV=1[more]
M5WUK5_PRUPE3.1e-11670.72Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009044mg PE=4 SV=1[more]
A0A103YBM3_CYNCS8.3e-11467.43Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_015570 PE=4 ... [more]
F6HBY4_VITVI1.9e-11369.57Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0018g01610 PE=4 SV=... [more]
A0A067LBR6_JATCU2.4e-11369.43Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26953 PE=4 SV=1[more]
BLAST of Cp4.1LG12g07210 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G16080.13.7e-11366.88 unknown protein[more]
BLAST of Cp4.1LG12g07210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659122550|ref|XP_008461203.1|2.2e-13985.00PREDICTED: uncharacterized protein LOC103499856 isoform X1 [Cucumis melo][more]
gi|449436211|ref|XP_004135887.1|7.0e-13884.33PREDICTED: uncharacterized protein LOC101216543 isoform X1 [Cucumis sativus][more]
gi|595939169|ref|XP_007215727.1|4.4e-11670.72hypothetical protein PRUPE_ppa009044mg [Prunus persica][more]
gi|645245378|ref|XP_008228852.1|5.7e-11670.72PREDICTED: uncharacterized protein LOC103328234 isoform X1 [Prunus mume][more]
gi|697123385|ref|XP_009615684.1|1.8e-11467.85PREDICTED: uncharacterized protein LOC104108372 [Nicotiana tomentosiformis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0030154 cell differentiation
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0010027 thylakoid membrane organization
cellular_component GO:0048046 apoplast
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g07210.1Cp4.1LG12g07210.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34044FAMILY NOT NAMEDcoord: 37..319
score: 8.8E
NoneNo IPR availablePANTHERPTHR34044:SF1SUBFAMILY NOT NAMEDcoord: 37..319
score: 8.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g07210Cucsa.106070Cucumber (Gy14) v1cgycpeB0229
Cp4.1LG12g07210CmaCh17G009090Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g07210CmoCh17G008800Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g07210Cla015310Watermelon (97103) v1cpewmB131
Cp4.1LG12g07210Csa7G431350Cucumber (Chinese Long) v2cpecuB161
Cp4.1LG12g07210MELO3C023482Melon (DHL92) v3.5.1cpemeB123
Cp4.1LG12g07210ClCG09G003450Watermelon (Charleston Gray)cpewcgB126
Cp4.1LG12g07210CSPI07G19950Wild cucumber (PI 183967)cpecpiB163
Cp4.1LG12g07210Lsi02G026490Bottle gourd (USVL1VR-Ls)cpelsiB113
Cp4.1LG12g07210MELO3C023482.2Melon (DHL92) v3.6.1cpemedB150
Cp4.1LG12g07210CsaV3_7G031750Cucumber (Chinese Long) v3cpecucB0188
Cp4.1LG12g07210Bhi09G000447Wax gourdcpewgoB0201
Cp4.1LG12g07210CsGy7G018230Cucumber (Gy14) v2cgybcpeB906
Cp4.1LG12g07210Carg18725Silver-seed gourdcarcpeB0493
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g07210Cucurbita pepo (Zucchini)cpecpeB157
Cp4.1LG12g07210Cucurbita pepo (Zucchini)cpecpeB181
Cp4.1LG12g07210Cucurbita pepo (Zucchini)cpecpeB185
Cp4.1LG12g07210Cucurbita maxima (Rimu)cmacpeB260
Cp4.1LG12g07210Cucurbita maxima (Rimu)cmacpeB465
Cp4.1LG12g07210Cucurbita maxima (Rimu)cmacpeB902
Cp4.1LG12g07210Cucurbita moschata (Rifu)cmocpeB224
Cp4.1LG12g07210Cucurbita moschata (Rifu)cmocpeB425
Cp4.1LG12g07210Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g07210Wild cucumber (PI 183967)cpecpiB138
Cp4.1LG12g07210Cucumber (Chinese Long) v2cpecuB137
Cp4.1LG12g07210Bottle gourd (USVL1VR-Ls)cpelsiB116
Cp4.1LG12g07210Watermelon (Charleston Gray)cpewcgB134
Cp4.1LG12g07210Melon (DHL92) v3.5.1cpemeB133
Cp4.1LG12g07210Cucumber (Gy14) v2cgybcpeB308
Cp4.1LG12g07210Silver-seed gourdcarcpeB0631
Cp4.1LG12g07210Silver-seed gourdcarcpeB1144